LOCUS       DAXHKG010000001        39755 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.001, whole genome shotgun sequence.
ACCESSION   DAXHKG010000001 DAXHKG010000000
VERSION     DAXHKG010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 39755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.001"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(91..864)
                     /locus_tag="ACFMWP_000001"
     CDS             complement(91..864)
                     /locus_tag="ACFMWP_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC5890677.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSAAVRGKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
     gene            complement(963..1586)
                     /gene="rsmG"
                     /locus_tag="ACFMWP_000002"
     CDS             complement(963..1586)
                     /gene="rsmG"
                     /locus_tag="ACFMWP_000002"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HFC5890678.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTGHLLKDG
                     GYWAAMKGVYPQGEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            complement(1682..2167)
                     /locus_tag="ACFMWP_000003"
     CDS             complement(1682..2167)
                     /locus_tag="ACFMWP_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890679.1"
                     /translation="MYVNEKYPYAALFAGLVFLTLPFALSVHDALAFAFGRAGLLVSV
                     SDGEFGWRGGWDGTVWFVFGVFAFLNVVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSAALGGLRGEAVSEYAFAVWLVSMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            2272..2347
                     /locus_tag="ACFMWP_000004"
     tRNA            2272..2347
                     /locus_tag="ACFMWP_000004"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2305..2307,aa:Thr,seq:cgt)
     gene            2421..3548
                     /locus_tag="ACFMWP_000005"
     CDS             2421..3548
                     /locus_tag="ACFMWP_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HFC5890680.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            3729..4286
                     /gene="frr"
                     /locus_tag="ACFMWP_000006"
     CDS             3729..4286
                     /gene="frr"
                     /locus_tag="ACFMWP_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HFC5890681.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            4342..5088
                     /locus_tag="ACFMWP_000007"
     CDS             4342..5088
                     /locus_tag="ACFMWP_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HFC5890682.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDET
                     ALDAAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            5092..5889
                     /locus_tag="ACFMWP_000008"
     CDS             5092..5889
                     /locus_tag="ACFMWP_000008"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HFC5890683.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLVATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLIMPFWFALVSLRPHPDNALPLLAVMGLVWIADVFAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSKLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            5894..7129
                     /gene="ispC"
                     /locus_tag="ACFMWP_000009"
     CDS             5894..7129
                     /gene="ispC"
                     /locus_tag="ACFMWP_000009"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HFC5890684.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            7164..8504
                     /gene="rseP"
                     /locus_tag="ACFMWP_000010"
     CDS             7164..8504
                     /gene="rseP"
                     /locus_tag="ACFMWP_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HFC5890685.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQSDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            8561..10954
                     /gene="bamA"
                     /locus_tag="ACFMWP_000011"
     CDS             8561..10954
                     /gene="bamA"
                     /locus_tag="ACFMWP_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HFC5890686.1"
                     /translation="MKLKQIASALMMLGISPLAFADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            11020..11520
                     /locus_tag="ACFMWP_000012"
     CDS             11020..11520
                     /locus_tag="ACFMWP_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HFC5890687.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            11553..12599
                     /gene="lpxD"
                     /locus_tag="ACFMWP_000013"
     CDS             11553..12599
                     /gene="lpxD"
                     /locus_tag="ACFMWP_000013"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HFC5890688.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPSATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            12633..13082
                     /gene="fabZ"
                     /locus_tag="ACFMWP_000014"
     CDS             12633..13082
                     /gene="fabZ"
                     /locus_tag="ACFMWP_000014"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HFC5890689.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVS
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            13289..13969
                     /locus_tag="ACFMWP_000015"
     CDS             13289..13969
                     /locus_tag="ACFMWP_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HFC5890690.1"
                     /translation="MERYKNAVGEDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CLQQAFKDRNWLYNSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDATGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINKFRNRLAHHEPICFKGAIKDTNYARNIHQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            14012..14788
                     /gene="lpxA"
                     /locus_tag="ACFMWP_000016"
     CDS             14012..14788
                     /gene="lpxA"
                     /locus_tag="ACFMWP_000016"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HFC5890691.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRHAETQAELAVFRDFFAQSARGIIR"
     gene            15146..16537
                     /locus_tag="ACFMWP_000017"
     CDS             15146..16537
                     /locus_tag="ACFMWP_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC5890692.1"
                     /translation="MQVFLDNPKAFFETVSGWVWGPVMLMLLVGTGILLTVLLKGLQF
                     TMLGYALKQAFVPPKKHKSGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMALA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            16606..17862
                     /locus_tag="ACFMWP_000018"
     CDS             16606..17862
                     /locus_tag="ACFMWP_000018"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HFC5890693.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAKGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQTKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETETGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            18043..18852
                     /gene="zupT"
                     /locus_tag="ACFMWP_000019"
     CDS             18043..18852
                     /gene="zupT"
                     /locus_tag="ACFMWP_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HFC5890694.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            18949..21786
                     /locus_tag="ACFMWP_000020"
     CDS             18949..21786
                     /locus_tag="ACFMWP_000020"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HFC5890695.1"
                     /translation="MLDKYSPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAINPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLEKLLVKRTTGLRKPETAPKVEEASRKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATATEPRGYSFPDMWIVDRL
                     NQTIEQVTQAYETYRFDLAAETLYSFMWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESTDDLADYLKYLPMMTRLIEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            21928..22119
                     /locus_tag="ACFMWP_000021"
     CDS             21928..22119
                     /locus_tag="ACFMWP_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890696.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(22116..23036)
                     /gene="oxyR"
                     /locus_tag="ACFMWP_000022"
     CDS             complement(22116..23036)
                     /gene="oxyR"
                     /locus_tag="ACFMWP_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HFC5890697.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(23040..23303)
                     /gene="minE"
                     /locus_tag="ACFMWP_000023"
     CDS             complement(23040..23303)
                     /gene="minE"
                     /locus_tag="ACFMWP_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HFC5890698.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            complement(23307..24122)
                     /gene="minD"
                     /locus_tag="ACFMWP_000024"
     CDS             complement(23307..24122)
                     /gene="minD"
                     /locus_tag="ACFMWP_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HFC5890699.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            complement(24150..24863)
                     /gene="minC"
                     /locus_tag="ACFMWP_000025"
     CDS             complement(24150..24863)
                     /gene="minC"
                     /locus_tag="ACFMWP_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HFC5890700.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPNHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            complement(25010..25378)
                     /gene="rplQ"
                     /locus_tag="ACFMWP_000026"
     CDS             complement(25010..25378)
                     /gene="rplQ"
                     /locus_tag="ACFMWP_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HFC5890701.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            complement(25402..26388)
                     /gene="rpoA"
                     /locus_tag="ACFMWP_000027"
     CDS             complement(25402..26388)
                     /gene="rpoA"
                     /locus_tag="ACFMWP_000027"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HFC5890702.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            complement(26414..27034)
                     /gene="rpsD"
                     /locus_tag="ACFMWP_000028"
     CDS             complement(26414..27034)
                     /gene="rpsD"
                     /locus_tag="ACFMWP_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HFC5890703.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            complement(27054..27449)
                     /gene="rpsK"
                     /locus_tag="ACFMWP_000029"
     CDS             complement(27054..27449)
                     /gene="rpsK"
                     /locus_tag="ACFMWP_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HFC5890704.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            complement(27469..27831)
                     /gene="rpsM"
                     /locus_tag="ACFMWP_000030"
     CDS             complement(27469..27831)
                     /gene="rpsM"
                     /locus_tag="ACFMWP_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HFC5890705.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            complement(27897..28010)
                     /gene="rpmJ"
                     /locus_tag="ACFMWP_000031"
     CDS             complement(27897..28010)
                     /gene="rpmJ"
                     /locus_tag="ACFMWP_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFC5890706.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            complement(28031..28249)
                     /gene="infA"
                     /locus_tag="ACFMWP_000032"
     CDS             complement(28031..28249)
                     /gene="infA"
                     /locus_tag="ACFMWP_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HFC5890707.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            complement(28254..29564)
                     /gene="secY"
                     /locus_tag="ACFMWP_000033"
     CDS             complement(28254..29564)
                     /gene="secY"
                     /locus_tag="ACFMWP_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HFC5890708.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            complement(29576..30010)
                     /gene="rplO"
                     /locus_tag="ACFMWP_000034"
     CDS             complement(29576..30010)
                     /gene="rplO"
                     /locus_tag="ACFMWP_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HFC5890709.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            complement(30012..30197)
                     /gene="rpmD"
                     /locus_tag="ACFMWP_000035"
     CDS             complement(30012..30197)
                     /gene="rpmD"
                     /locus_tag="ACFMWP_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HFC5890710.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            complement(30190..30708)
                     /gene="rpsE"
                     /locus_tag="ACFMWP_000036"
     CDS             complement(30190..30708)
                     /gene="rpsE"
                     /locus_tag="ACFMWP_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HFC5890711.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            complement(30727..31080)
                     /gene="rplR"
                     /locus_tag="ACFMWP_000037"
     CDS             complement(30727..31080)
                     /gene="rplR"
                     /locus_tag="ACFMWP_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HFC5890712.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            complement(31094..31627)
                     /gene="rplF"
                     /locus_tag="ACFMWP_000038"
     CDS             complement(31094..31627)
                     /gene="rplF"
                     /locus_tag="ACFMWP_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HFC5890713.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            complement(31641..32033)
                     /gene="rpsH"
                     /locus_tag="ACFMWP_000039"
     CDS             complement(31641..32033)
                     /gene="rpsH"
                     /locus_tag="ACFMWP_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HFC5890714.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            complement(32049..32354)
                     /gene="rpsN"
                     /locus_tag="ACFMWP_000040"
     CDS             complement(32049..32354)
                     /gene="rpsN"
                     /locus_tag="ACFMWP_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HFC5890715.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            complement(32357..32896)
                     /gene="rplE"
                     /locus_tag="ACFMWP_000041"
     CDS             complement(32357..32896)
                     /gene="rplE"
                     /locus_tag="ACFMWP_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HFC5890716.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            complement(32906..33229)
                     /gene="rplX"
                     /locus_tag="ACFMWP_000042"
     CDS             complement(32906..33229)
                     /gene="rplX"
                     /locus_tag="ACFMWP_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HFC5890717.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            complement(33241..33609)
                     /gene="rplN"
                     /locus_tag="ACFMWP_000043"
     CDS             complement(33241..33609)
                     /gene="rplN"
                     /locus_tag="ACFMWP_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HFC5890718.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            complement(33831..34094)
                     /gene="rpsQ"
                     /locus_tag="ACFMWP_000044"
     CDS             complement(33831..34094)
                     /gene="rpsQ"
                     /locus_tag="ACFMWP_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HFC5890719.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            complement(34094..34285)
                     /gene="rpmC"
                     /locus_tag="ACFMWP_000045"
     CDS             complement(34094..34285)
                     /gene="rpmC"
                     /locus_tag="ACFMWP_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HFC5890720.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            complement(34285..34701)
                     /gene="rplP"
                     /locus_tag="ACFMWP_000046"
     CDS             complement(34285..34701)
                     /gene="rplP"
                     /locus_tag="ACFMWP_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HFC5890721.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            complement(34685..35377)
                     /gene="rpsC"
                     /locus_tag="ACFMWP_000047"
     CDS             complement(34685..35377)
                     /gene="rpsC"
                     /locus_tag="ACFMWP_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HFC5890722.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            complement(35387..35716)
                     /gene="rplV"
                     /locus_tag="ACFMWP_000048"
     CDS             complement(35387..35716)
                     /gene="rplV"
                     /locus_tag="ACFMWP_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HFC5890723.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            complement(35725..36003)
                     /gene="rpsS"
                     /locus_tag="ACFMWP_000049"
     CDS             complement(35725..36003)
                     /gene="rpsS"
                     /locus_tag="ACFMWP_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HFC5890724.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            complement(36010..36843)
                     /gene="rplB"
                     /locus_tag="ACFMWP_000050"
     CDS             complement(36010..36843)
                     /gene="rplB"
                     /locus_tag="ACFMWP_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HFC5890725.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            complement(36849..37163)
                     /gene="rplW"
                     /locus_tag="ACFMWP_000051"
     CDS             complement(36849..37163)
                     /gene="rplW"
                     /locus_tag="ACFMWP_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HFC5890726.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANAAKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            complement(37160..37780)
                     /gene="rplD"
                     /locus_tag="ACFMWP_000052"
     CDS             complement(37160..37780)
                     /gene="rplD"
                     /locus_tag="ACFMWP_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HFC5890727.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            complement(37780..38424)
                     /gene="rplC"
                     /locus_tag="ACFMWP_000053"
     CDS             complement(37780..38424)
                     /gene="rplC"
                     /locus_tag="ACFMWP_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HFC5890728.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            complement(38878..39201)
                     /locus_tag="ACFMWP_000054"
                     /pseudo
     CDS             complement(38878..39201)
                     /locus_tag="ACFMWP_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573867.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(39176..39307)
                     /locus_tag="ACFMWP_000055"
     CDS             complement(39176..39307)
                     /locus_tag="ACFMWP_000055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890729.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQRYDHLCR"
     gene            complement(39428..39739)
                     /gene="rpsJ"
                     /locus_tag="ACFMWP_000056"
     CDS             complement(39428..39739)
                     /gene="rpsJ"
                     /locus_tag="ACFMWP_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HFC5890730.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLSAGVDVEIKV
                     Q"
BASE COUNT        10492 a        10886 c         8976 g         9401 t
ORIGIN      
        1 atgacgatat aagtattttt attttaatcc gccatattaa cgcacccggc caaacagcat
       61 aaaggcacgg gcagcccgat ttggattgac ctatttcccc gacaccctcg ccatcagctc
      121 gtccgccaag gcaagatacg ccttggtacc ctttgcctgc gcgtcgtaag ccatcaccgg
      181 cataccgtgg ctcggtgctt ccgcaaggcg gatattgcgc gggatgacgg tttcaaacag
      241 caaatccccg aaatggctgc gcaactgttc gctgacttcg gcaaccagcc tgctgcggct
      301 gtcgtacatc gtgcgcacga tgcccgtgat gtccaaatcg ggattgaccg cctgacggat
      361 tttacgcacg gtcgcaatca aatcggaaat cccctcaagc gcgtaatatt cgcacaacat
      421 cggcacaatc acgccgcccg ccgccaccaa gccgttaagc gtcaacagcg tcagcgaagg
      481 cggacagtcg atcaggataa agtcgtaatc ttccgccact gccttgagtg cgtttttcaa
      541 acgcacttcc cgggcgattt cctgcaccag ttcgatttcc gcgccggcaa gtgcgcggtt
      601 cgcacccaac acagcgtatc cgccctcttt gccgcgtacc gccgccgatt tcacgtccgc
      661 atcgcccaat aagacctgat aaacgccgga ctgcaaaccc gccttgtcga taccgctgcc
      721 cgtcgtcgca ttgccctgcg gatccaaatc gaccaccagc acgcgtttgc cgcgcgatgc
      781 cagcgaagcc gccaaattta ccgtcgtcgt cgttttgccc acaccgccct tctgattggc
      841 gatggcaagg atgttcgcac tcatgtcccg cccgtgtccc gtctgatgtt gaaaaaagaa
      901 aaacagtgcg gaattttacc tttatccgca caaaaaaggt attcatgccg tctgaagtgc
      961 gctcaacgct tgctcaggat gacgatatgg cgttccgcat ccaagcctgg cacgtcgagc
     1021 ctttggactt tttcaacgca cacatcctgc ggcaggcggc cgatttcccc ctgcggatac
     1081 acgcccttca tcgccgccca gtatccgccg tctttcaaca gatgccccgt ccacgacaca
     1141 aagtccgcca gttctgcaaa cgcacggctg gtaaccacat cggcacgcac gtccgaaacc
     1201 gcctccacgc gtccggatac cacgcgcaca ttgtccaacc ccaactcgat aaccgcctgc
     1261 tgtaaaaaag ccgttttctt cgtatttgca tccaaaaggg ttatctgcac atccggacgg
     1321 cacaccgccg ccggaatgcc gggctgaccg ccgcccgaac cgacatccag catcgtttgc
     1381 acaccctcga tatggggcag cagcgtcagg ctgtccaaaa gatgatggac aatcattttt
     1441 tcctcgtcgc gcagggcggt cagattgtag gttttgttcc actttttcaa caaatccaca
     1501 taggccaaaa gcctgtcctg cgccgtttcc gaaatatcca gccccatcgc ggcaatgcct
     1561 gcacgcaggc gttctttgcg ttccatatct gcttcctgtc catattcagg cgtaatgtta
     1621 gcggaaaaac atgccatctg aaaccgcgtg tcggggttca gacggcattt cccgttccaa
     1681 cctatttttt cctgtgaaac accaccggct gcaccggcgc gcgcgtcagg cgtttgggca
     1741 gcgtcagcat agacaccagc cacacggcaa acgcatattc cgacaccgcc tccccgcgca
     1801 gcccgcccaa ggcggcactg cccaacaaca gctcgaaaat ccacgcgacc gcagcagccg
     1861 cgcaagccgc cacgcccgac agaaacagcg cgtaacgcga atgccgccgc atcatctttt
     1921 tgtacgccag tttcgtcagg cccgccgaca caaccacatt caaaaacgca aacacaccga
     1981 acacaaacca aacagtgccg tcccaaccgc cacgccagcc gaattcgccg tccgacaccg
     2041 acaccagcag ccccgcccgt ccgaacgcaa atgccaaggc atcatgcacc gacagtgcga
     2101 acggcagcgt caaaaacacc agccccgcaa acaaagccgc atagggatat ttctcgttca
     2161 catacatcac cgactctcct cacgaagcaa accgcattat accgtgcaaa actttgccag
     2221 cagcccgaaa agttgcagaa acaaccgttc atatatatca taacgaaaaa agccggtgta
     2281 gctcagtcgg tagagcagcg cattcgtaac gcgaaggtcg ggggttcgat tcccttctcc
     2341 ggcaccaata ccaagcacag accctccctt cctcgggaag cctgtgcttt ttcacatttc
     2401 cgcttcagac ggcaaccgat atgaacacct cgcaacgcaa ccgcctcgtc agccgctggc
     2461 tcaactccta cgaacgctac cgccaccgcc gcctcataca cgccgtgcgg ctcggcgggg
     2521 ccgtcctgtt cgccaccgca ctcgcccggc tgctccacct ccaacacggc gaatggatag
     2581 gcatgaccgt cttcgtcgtc ctcggcatgc tccagtttca aggggcgatt tactccaagg
     2641 cggtggaacg tatgctcggc acggtcatcg ggctgggcgc gggtttgggc gttttatggc
     2701 tgaaccagca ttatttccac ggcaacctcc tcttctacct caccgtcggc acggcaagcg
     2761 cactggccgg ctgggcggcg gtcggcaaaa acggctacgt ccctatgctg gcggggctga
     2821 cgatgtgcat gctcatcggc gacaacggca gcgaatggtt cgacagcggc ctgatgcgcg
     2881 ccatgaacgt cctcatcggc gcggccatcg ccattgccgc cgccaaactg ctgccgctga
     2941 aatccacact gatgtggcgt ttcatgcttg ccgacaacct gaccgactgc agcaaaatga
     3001 ttgccgaaat cagcaacggc aggcgtatga cgcgcgaacg tttggagcag aatatggtta
     3061 aaatgcgcca aatcaacgca cgcatggtca aaagccgcag ccacctcgcc gccacatcgg
     3121 gcgaaagccg catcagcccc gccatgatgg aagccatgca gcacgcccac cgtaaaattg
     3181 tcaacaccac cgagctgctc ctgaccactg ccgccaagct gcaatctccc aaactcaacg
     3241 gcagcgaaat ccggctgctc gaccgccact tcacactgct ccaaaccgac ctgcaacaaa
     3301 ccgtcgccct tatcaacggc agacacgccc gccgcatccg catcgacacc gccatcaacc
     3361 ccgaactgga agccctcgcc gaacacctcc actaccaatg gcagggcttc ctctggctca
     3421 gcaccaatat gcgtcaggaa atttccgccc tcgtcatcct gctgcaacgc acccgccgca
     3481 aatggctgga tgcccacgaa cgccaacacc tgcgccaaag cctgcttgaa acacgggaac
     3541 acggctgacg gtcggacacg atgccgtctg aaacgcctgc cgcttcagac ggcatcccca
     3601 atccgcctgc cttgtcgtca tgcccgaata acggtactat tcgcagttaa cagttttcat
     3661 gccgtctgaa aggtttgaag cgcgtttcag acggctgccc gcccacctta tcccaccgaa
     3721 agaacaatat gatcaacgat attcaaaaaa cagccgaagg caaaatgcag cgttcggtcg
     3781 aagtactgaa agaaaatctg gcgaaagtgc gtaccggccg cgcgcatacc ggcctgctcg
     3841 accaagtgga agtcgaatac tggggcagca tggtccccgt cagccaagtt gccaacgtaa
     3901 cgcttctgga cgcgcgcacc atcggcgtga aaccgtttga gggcaatatg gcggccaaag
     3961 tcgagaaagc catccgcgat tcaaacttgg ggctgaaccc ggcagctgtc ggcgacctga
     4021 tccgcgtgcc gatgcccatg ctgaccgagg aacgccgcaa agacctgatt aaagtcgtac
     4081 gcggcgaagc ggaagaaggc cgcgtctcta tccgcaacgt gcgccgcgat gccaacgacc
     4141 acatcaaaaa actcctcaaa gacaaagaaa tttccgaaga cgaggcacgt cgcggcgaag
     4201 aagcggttca aaaactgacc gacaaataca ttaccgaagc cgacaaactc ctgactgcca
     4261 aagaagaaga tttgatggca atttaacctg cacggttcgg cgttcagacg gcatttgaat
     4321 gccgaaccgc gaaaggcaga catgaaaagc agcacgcagg ccgttttgga acacaccgcc
     4381 attcccaagc atatcgccgt gattatggac ggcaacggcc gttgggcgaa aaaacgtttc
     4441 ctcccgcgca taatgggaca caaacgcggt ttggacgcat tggaaaatat ggtgaagcat
     4501 tgcgccaaac tgggtgtgca atatctgacc gtgtttgcct tttcaaccga aaactggcgc
     4561 cgccccgaag acgaagtttc gttcctgatg gggctgtttt tacaggcttt gcaaaaacag
     4621 gtacgccgtc tgcacgaaaa caatatgcgc ctgaaaatac tgggcagccg cgaacgcttc
     4681 aaccggcaga ttctgcaagg catcgaagaa gcggaggcgt tgacggcaaa caataccggc
     4741 ctgaccctga gcattgccgc cgattacggc ggccgctggg atattttgca ggcggcaaac
     4801 aaactgattg ccgaaggcgt atccgagatt acagaagaca cgctggcgaa acacttgatg
     4861 ctgggcgatg caccggaacc ggatttgttc atccgcaccg gcggagaaac gcgcatcagc
     4921 aatttcctgc tctggcagat ggcgtatgca gaactgtatt tcaccgacat cctgtggcct
     4981 gatttcgacg aaaccgcctt agatgccgcc gtcgcttcgt tccaaaaacg cgaacggcgg
     5041 ttcggacgca cctccgagca actgcctatc gaacagcaaa ggaactaaat tatgctgaaa
     5101 caacgggtaa taaccgctat gtggctgctg ccgctgatgc tgggcatgct gttttacgcg
     5161 ccgcaatggt tgtgggctgc attttgcgga ctgattgccc tgattgcctt gtgggaatat
     5221 gcccgtatgg gcggcttgtg caaaatcaaa accaaccatt acctcgtcgc aaccttggtt
     5281 ttcggcgtgg ttgcctatgc gggcggctgg atgctgccta atttggtttg gtatgttgtt
     5341 ttggcatttt ggctcgccat catgccttta tggttgagat ttaaatggag gctcaacggc
     5401 ggttggcagg tttatgccgt cggctggctt ctgatcatgc cgttttggtt cgcgctcgta
     5461 tccctgcgcc cgcatcccga taatgccctg ccgctgctcg ccgtcatggg tttggtgtgg
     5521 attgccgatg ttttcgcgta tttcagcggc aaggcgttcg gcaaacacaa aatcgcaccg
     5581 gcaatcagcc ccggcaagag ctgggaaggc gcaatcggcg gcgcggtttg cgtggccgtg
     5641 tacatgaccg ccgtacgaag tgccggctgg ctggcattcg atacaggctg gttcgatacc
     5701 gtgttaatcg gtttggtgtt gaccgttgtc agcgtatgcg gcgacctttt ggaaagctgg
     5761 ctcaagcgcg cggcaggcat caaagacagc agcaagctac tgccaggaca cggcggcgtg
     5821 ttcgaccgta ccgacagcct gattgccgtt atcagcgtct atgcggcgat gatgtcggtt
     5881 ttaaattgat tctatgccgt ctgaaaacgc ttcagacggc atccggtata aagttatcct
     5941 cattatgaca ccacaagtcc tgaccatatt aggcagtacc ggcagcatag gcgaaagcac
     6001 gctggacgtt gtctcccgcc accccgaaaa attccgcgta ttcgcgctgg cagggcataa
     6061 gcaggtcgag aaattggcgg ctcaatgtca aacgttccgc cccgaatatg ccgtcgttgc
     6121 cgatgcggaa cacgccgctc ggcttgaagc cctgttgaaa cgcgacggca cggcgacgca
     6181 ggttttacac ggcgcgcagg cattggttga cgttgcgtct gccgacgaag tcagcggtgt
     6241 catgtgcgcc atcgtcgggg cagtggggct gccttccgcg ctcgcagcgg cgcaaaaagg
     6301 caaaaccatt tatctggcga acaaagagac gctggtggtt tccggcgcgt tgtttatgga
     6361 aaccgcccgt gcaaacggcg cggcagtgct gcccgtcgac agcgaacaca acgccgtttt
     6421 ccaagttttg ccgcgcgatt acgccggccg tctgaacgaa cacggcatcg cttcgattat
     6481 cctgaccgct tccggcggcc cgtttctgac cgccgattta aacacgttcg acagcattac
     6541 gcccgcccaa gcggtcaaac accccaattg gagcatgggg cgcaaaatct ccgtcgattc
     6601 cgccaccatg atgaacaaag gtttggagct gattgaagcg cattggctgt tcaactgtcc
     6661 gcctgacaag ctcgaagtcg tcatccatcc gcaatccgtg atacacagca tggtgcgcta
     6721 ccgcgacggc tccgtgttgg cacaactggg caatcccgat atgcgaacgc ccatcgccta
     6781 ttgtttgggc ttgcccgagc gcatcgattc gggtgtcggc gaccttgatt tcgacgcatt
     6841 gtccgcgctg accttccaaa agcccgactt tgaccgcttc ccctgcctga agctcgccta
     6901 tgaagccatg aacgcaggcg gagccgcgcc ctgcgtattg aacgccgcca acgaagccgc
     6961 cgtcgccgcc tttttggacg gacagattaa gtttaccgac attgccaaaa ccgtcgccca
     7021 ttgtctttca caagactttt cagacggcat aggcgacata ggggggctct tggcgcaaga
     7081 tgcccggaca cgcgcacaag cgcgggcatt tatcggcaca ctgcgctgat gccgtctgaa
     7141 caccgttatc aaaggaaaac catttgcaca cccttctagc ttttatcttc gccatcctga
     7201 ttttggtcag cctgcacgag ttcggacact acatcgttgc cagattgtgc ggcgtcaaag
     7261 tcgtacgctt ttccgtcggc ttcggcaaac cgtttttcac ccgaaagcgc ggcgacaccg
     7321 aatggtgcct cgccccgatt ccgttgggcg gttacgtcaa aatggtcgac acgcgcgaag
     7381 gcgaagtatc agaagccgat ttaccctacg cttttgacaa acaacacccc gccaaacgca
     7441 tcgccatcgt cgccgccggc ccgctgacca acctcgcact ggcggttttg ctgtacggac
     7501 tgagcttttc cttcggcgta accgaactgc gcccctacgt cggcacagtc gaacctgaca
     7561 ccattgccgc ccgcgccggc ttccaaagcg gcgacaaaat acaatccgtc aacggcacac
     7621 ccgttgcaga ttggggcagc gcgcaaaccg aaatcgtcct caacctcgaa gccggcaaag
     7681 tcgccgtcgg cgttcagacg gcatcgggcg cgcaaaccgt ccgcaccatc gatgccgcag
     7741 gcacgccgga agccggtaaa atcgcaaaaa accaaggcta catcggactg atgcccttta
     7801 aaatcacaac cgttgccggc ggcgtggaaa aaggcagccc cgccgaaaaa gcaggcctga
     7861 aaccgggcga caggctgact gccgccgacg gcaaacccat cgcctcatgg caggaatggg
     7921 caaacctgac ccgccaaagc cccggcaaaa aaatcaccct gaactacgaa cgcgccggac
     7981 aaacccatac cgccgacatc cgccccgata ctgtcgaaca gtccgaccac accctgatcg
     8041 ggcgcgtcgg cctccgtccg cagccggaca gggcgtggga cgcgcaaatc cgccgcagct
     8101 accgtccgtc tgttatccgc gcattcggca tgggctggga aaaaaccgtt tcccactcgt
     8161 ggacaaccct caaatttttc ggcaaactaa tcagcggcaa cgcctccgtc agccatattt
     8221 ccggtccgct gaccattgcc gatattgccg gacagtccgc cgaactcggc ttgcaaagtt
     8281 atttggaatt tttggcactg gtcagcatca gcctcggcgt gctgaacctg ctgcccgtcc
     8341 ccgttttgga cggcggccac ctcgtgtttt atactgccga atggatacgc ggcaaacctt
     8401 tgggcgaacg cgtccaaaac atcggtttgc gcttcgggct tgccctcatg atgctgatga
     8461 tggcggtcgc cttcttcaac gacgttaccc ggctgctcgg ttagatttta cgtttcggaa
     8521 tgccgtctga aaccgcattc cgcaccacaa ggaacttacg atgaaactga aacagattgc
     8581 ttccgcactg atgatgttgg gcatatcgcc tttggcattt gccgacttca ccatccaaga
     8641 catccgtgtc gaaggcttgc agcgtaccga gccgagcacc gtattcaact acctgcccgt
     8701 caaagtcggc gatacctaca acgacacaca cggcagtgcc atcatcaaaa gcctgtacgc
     8761 caccggtttc tttgacgacg tacgcgtcga aactgcggac gggcagctcc tgctgaccgt
     8821 tatcgaacgc cccaccatcg gctcgctcaa catcaccggc gcaaaaatgc tgcaaaacga
     8881 cgccattaag aaaaacctcg aatcgttcgg gctggcgcag tcgcaatact ttaatcaggc
     8941 gacactcaat caggcagtcg ccggcctgaa agaagaatac ctcgggcgcg gcaaactcaa
     9001 tatccaaatc acgcccaaag taaccaaact cgcccgcaac cgcgtcgaca tcgacatcac
     9061 gattgacgag ggcaaatccg ccaaaatcac cgacatcgaa tttgaaggca accaagtcta
     9121 ttccgaccgc aaactgatgc ggcagatgtc gctgaccgaa ggcggcattt ggacatggct
     9181 gacacgaagc aaccaattca acgagcagaa atttgcccaa gacatggaaa aagtaaccga
     9241 cttctaccag aacaacggct acttcgattt ccgtatcctc gataccgaca tccaaaccaa
     9301 cgaagacaaa accaagcaga ccatcaaaat caccgtccac gaaggcggac gtttccgttg
     9361 gggcaaagtc tccatcgaag gcgacaccaa cgaagtcccc aaagccgaac tggaaaaact
     9421 gctgaccatg aagcccggca aatggtacga acgccagcag atgaccgccg ttttgggtga
     9481 gattcagaac cgcatgggct cggcaggcta cgcatacagc gaaatcagcg tacagccgct
     9541 gccaaacgcc gaaaccaaaa ccgtcgattt cgtcctgcac atcgaaccgg gccggaaaat
     9601 ctacgtcaac gaaatccaca tcaccggcaa caacaaaacc cgcgacgaag tcgtgcgccg
     9661 cgaattgcgc caaatggaat ccgcgcctta cgacacctcc aagctgcaac gctccaaaga
     9721 gcgcgtcgag cttttgggct acttcgacaa cgtacagttt gatgccgtcc cgcttgccgg
     9781 cacacccgac aaagtcgatt tgaacatgag cctgaccgaa cgttccaccg gctcgctcga
     9841 cttaagcgcg ggctgggtac aggataccgg cctggtcatg tccgcaggcg tttcccaaga
     9901 caacctgttc ggtacgggca agtcggccgc cctgcgcgcc tcacgaagca aaaccacgct
     9961 caacggctcg ctgtcgttta ccgacccgta cttcacggca gacggggtca gcctgggcta
    10021 cgatgtttac ggaaaagcct tcgacccgcg caaagcatcg accagcatca aacaatataa
    10081 aaccaccacg gcaggcgcag gcatccgcat gagcgtgcct gttaccgaat acgaccgcgt
    10141 gaatttcggt ttggtggcag aacacctgac cgtcaacacc tacaacaaag cgcccaaaca
    10201 ctatgccgac tttatcaaga aatacggcaa aaccgacggc acagacggca gcttcaaagg
    10261 ctggctgtac aaaggtaccg tcggctgggg gcgcaacaaa accgacagcg cgttatggcc
    10321 gacgcgcggc tacctgacgg gcgtgaacgc cgaaatcgcc ctgcccggca gcaaactgca
    10381 atactactcc gccacccaca accaaacctg gttcttcccc ttaagcaaaa ccttcacgct
    10441 gatgctcggc ggcgaagtcg gcattgcggg cggctacggc agaaccaaag aaatcccctt
    10501 ctttgaaaac ttctacggcg gcggcctggg ttcggtgcgc ggatacgaaa gcggcacgct
    10561 cggtccgaaa gtgtatgacg aatacggcga aaaaatcagc tacggcggca acaaaaaagc
    10621 caacgtctcc gccgagctgc tcttcccgat gcctggcgcg aaagacgcgc gcaccgtccg
    10681 cctgagcctg tttgccgacg caggcagcgt gtgggacggc aaaacctacg acgacaacag
    10741 cagttccgcg accggcggca gggttcaaaa catttacggc gccggcaata cccataaatc
    10801 cacctttacc aacgaattgc gctattccgc cggcggcgcg gttacctggc tctcgccttt
    10861 aggcccgatg aaattcagct acgcctaccc gctgaagaaa aaaccggaag acgaaatcca
    10921 acgcttccaa ttccaactcg gcacgacgtt ctaatcccgc aaatgccgtc tgaagccctt
    10981 cagacggcat ttcgcggcaa cattcgaagg agttttacca tgacccgttt gacccgcgcg
    11041 tttgccgcgg ctctgatcgg tttgtgctgc accgcaggcg cgcacgccga caccttccaa
    11101 aaaatcggct ttatcaacac cgagcgcatc tacctcgaat ccaagcaggc gcgcaagatt
    11161 caaaaaacgc tggacagcga attttccgcc cgtcaggacg aattgcaaaa actgcaacgc
    11221 gaaggtctgg atttggaaag gcagcttgcc gaaggcaaac tcagaaacgc aaaaaaggcg
    11281 caagccgaag aaaaatggcg cgggctggtc gcagcgttcc gcaaaaaaca ggcgcagttt
    11341 gaagaagact acaacctccg ccgcaacgaa gagtttgcct ccctccagca aaacgccaac
    11401 cgcgtcatcg tcaaaatcgc caaacaggaa ggttacgatg tcattttgca gaacgtgatt
    11461 tacgtcaaca cccaatacga cgttaccgac agcgtcatta aagaaatgaa cgcccgctga
    11521 ccctttcaga cggcataccg aacaggaaaa ccatgattcc ggccacctac accctgtccc
    11581 aaatcaccgc gcggctcggc ggcgaatggc gcggcgagga catttccgtt accgccgtgc
    11641 gcccgctcgc agacgcgcag gcggaacaca tcagcttcct tgccaatccg aaatacaaag
    11701 ccgaagtcca cgacagcagc gcgggcgcgg tcatcgtttc cgccaaagcg gcagacggat
    11761 ttgaagggcg caacctgatt gtcgccgacg acccctatct ctatttcgcc aaagtcgccc
    11821 gcctgttttc acccgtcgtc aaagcgcgcg gcggcatcca tccgaccgcc gtcgtcgaac
    11881 cgagtgccac cgttcccgca agctgcgaaa tcggcgcgaa cgcctacatc ggcgcaaaca
    11941 ccgtgctcgg cgaaggctgc cgcatcttgg caaacgccgt cgtccaacac gattgcaaac
    12001 tgggcgacga agtcgtcctg catcccaacg ccgtcgttta ttacggctgc acactgggca
    12061 gacgcgtcga aatccacagc ggcgcggtca tcggcgcgga cggtttcgga ctcgcttttg
    12121 ccggcgattc atggtttaaa atcccgcaaa ccggcgcggt aacgctgggc gacgacgtag
    12181 aaatcggctc gaacaccaac atcgaccgcg gcgcgatgag cgacaccacc gtcggcaacg
    12241 gcaccaaaat cgacaaccaa gtccaaatcg gacacaactg caaaatcggt tcgcacaccg
    12301 tcatcgccgc caaaaccggc atctcaggca gcgtaaccat aggcagctac tgcatcatcg
    12361 gcggcggcgt cggtacggtc ggacacatcg aaatcgccga caaaaccacc atcggcggcg
    12421 gcacgtccgt cacccacagc attaccgaaa gcggcaaaca cctcgccggc atcttcccga
    12481 tgtccaccca taaagaatgg gcgcgcaacg ctgtttacat ccaccgctta agcgaaatga
    12541 acaaacggct caaaacactg gagcagcagc tttcagatgc cggtcaagac agcaaataac
    12601 caaaccgact ttattcaagg aatacgacag acatggacgt acaactcccc atcgaagcca
    12661 aagacatcca aaaactcatc ccccaccgct atccgtttct ccagctcgac cgcatcaccg
    12721 ccttcgagcc gatgaaaacc ctgaccgcga ttaaaaacgt cagcataaac gagccccagt
    12781 tccaaggcca ctttcccgac ctgcccgtga tgcccggcgt actcatcatc gaagcgatgg
    12841 cgcaagcctg cggcacgttg gcgattttga gcgaaggcgg gcgcaaagaa aacgaattct
    12901 tcttcttcgc cggcatagac gaagcccgtt tcaaacgcca agtcatcccc ggcgaccaac
    12961 tcgtctttga agtcgagctg ctgaccagcc ggcgcggcat cggcaaattc aacgccgttg
    13021 ccaaagtgga cgggcaagtc gccgtcgaag ccatcatcat gtgtgccaaa cgcgtggttt
    13081 gagcgttcgg aaaaaggtcg tctgaaagtt tcagacgacc taataaaaag aaaacccacc
    13141 ggtttaggtt tattcaaacc cagggacacg gtggggatta gttttaccta actgtatcaa
    13201 atatagtttg aaacgtcaat ttaaaaataa agaatcaggt gttagcgtgg attataagga
    13261 atgctgtagt attttttctg atttcagaat ggaacggtat aaaaatgccg ttggggaaga
    13321 caaagcagct gaattgtatt tattgaattt atctttatca agagaacttt ttcatgttgt
    13381 ttcaatattt gagattgttt taagaaacaa aattgacatt tgccttcagc aggcgtttaa
    13441 agacagaaac tggttatata acagcataca gccacagacg aatcccgcat taaaatatca
    13501 aggttgcttt ttaagaaatg gcacgaaaga atctgctgaa ttaatcaagg ttgcattatc
    13561 taaaatacaa aataatagcg ggggaaagtt tgaccacaac caattggttg caggactagg
    13621 attcggtttt tggcggtatc tgtttgcagg agggaaagat gcccaatttg atgctacagg
    13681 gaaagtattg atgaaagttt ttccaaaaaa gcccaaatct acaccaagtg tgcaatataa
    13741 ccaaaaatgg atttttcgag aactttccaa tattaacaaa ttccgtaatc gtttggcaca
    13801 tcacgagccg atttgtttta aaggtgcaat aaaagatacc aactacgcta gaaatattca
    13861 ccaatctatt tttgaactgc ttaattacat ggatgtagat actgcttcag tatttagcca
    13921 ttttagcgat caagtgattg cggtctgcga tgaaatcgac aaactgtaat tttctattat
    13981 ttgtcttaac aagcagcgga gtattcaaaa catgaccctc atccacccga ccgccgtcat
    14041 cgaccccaaa gccgaactcg actccagcgt caaagtcggc gcgtacaccg tcatcggccc
    14101 caacgtccaa atcggcgcga ataccgaaat cggcccgcac gccgtcatca acggccacac
    14161 cagcatcggc gaaaacaacc gcattttcca atttgccagc ctcggcgaaa tcccgcagga
    14221 caaaaaatac cgcgacgagc cgaccaagct gattatcggc aacggcaaca ccatccgcga
    14281 attcaccacc tttaatttag gcacggtaac cggcatcggc gaaacccgta tcggcgacga
    14341 caactggatt atggcgtact gccacctcgc gcacgactgc gtggtcggca accacaccat
    14401 cttcgccaac aacgcctcgc ttgccggaca cgttaccatc ggcgactacg tcgttttggg
    14461 cggctacacg ctggttttcc aattctgccg catcggcgac tacgccatga ccgcgtttgc
    14521 cgcaggcgta cacaaagacg tgccgcccta ctttatggca tcgggctacc gcgccgaacc
    14581 ggcggggctc aacagcgaag gcatgcgccg caacggtttt accgcagagc agatttccgc
    14641 cgtcaaagac gtgtacaaaa ccctctacca tcgcggcatt ccgtttgaag aagccaaggc
    14701 agacattctc cgccacgccg aaacccaagc cgagcttgcc gtattccgag actttttcgc
    14761 acaatcggca cgcggcatca tccgctgacc gtaccctttt gatgccgtct gaaaccccga
    14821 cagcgtttca gacggcatcg gtttttttaa agcggtatat tgtttgatcg atgcatcatt
    14881 ttgtagattt cagaagtatg gcagtcggca gcattgatga tttctgccgc ccgccacatc
    14941 cccattcgga catttcattg tgacctccgc cgctgctttt aaagaattgc aaacaatttc
    15001 cgcagcttga accggcctgt tttcggcgaa aaaaaccaaa agtatttttc aaaagaacat
    15061 attgtcttat tggatattct gtgctgaaat tactggacac tacaaaagtg gtgttttaaa
    15121 aataaaacag acaaaggaga aagccatgca agtgttttta gacaatccca aagccttttt
    15181 tgaaaccgtc agcggctggg tttggggacc tgttatgttg atgctgctgg tcggcacggg
    15241 tattttgctg actgttttat taaaaggttt gcagttcacg atgttgggtt atgcgctgaa
    15301 acaggcgttt gtgccgccaa agaagcataa aagcggcgaa ggccacgaag gcgatatttc
    15361 ccatttcgcg gcgttgatga ccgcgctgtc cgccaccatc ggtacgggta acatcgccgg
    15421 cgtggcgact gcggtggtaa ccggcggccc gggcgcggta ttttggatgt ggatgaccgc
    15481 cattttcggc atggccacca aatacggcga aggcgtgttg gcggtgaaat accgcgtcaa
    15541 caattccaaa ggcgaaatgt ccggcggccc gatgtattac atcgaaaaag gcttgggcaa
    15601 aaactggaaa tggatggcgt tggcgttcgc tttattcggc acattcgctt ccttcggtat
    15661 cggcagctcg gtgcagtcca actcggttgc acaggcggtg caaaccagct tcggtatcga
    15721 acctgcctat accggcatta cgttgaccgt tctgactgcc gttgtcgttt taggtggtat
    15781 taaaggcatc gccaaagccg cttctttcat cgtgcctgct atggcggtgt tttatgtgtt
    15841 gggcggtctt tccattatcg cgattaattc cgatgcactg atgcctgccg tcaagctaat
    15901 tttctccgat gcgttcagcg cgcaggcagt ggcgggcggc gctatcggta cggtcatccg
    15961 ctacggcgtg gcgcgcggcg tgttctccaa tgaggcgggt atgggttctg cgcctattgc
    16021 cgccgcagcc gcgaaaaccg accatcccgt ccgtcaggcc ttggtttcta tgaccggtac
    16081 gtttttggat accatcgtcg tttgctcgat taccggcatc gtgttggtaa tgggactgct
    16141 cggcgcgggc ggcgagtttg tcaaacctga agtgagcggc gcggcactga caaccgtcac
    16201 attccaaaaa atgctgcccg gcatcggcgg ctggattgtt accatcggcc tgattttctt
    16261 tgcctactca accattttgg gctggtgcta ttacggcgaa aaatgcgcgg tgtatgtttt
    16321 cggcgagaaa tttgccggtt tgtaccgcgt gggttatgtt tcttccgtta tgctgggtac
    16381 cgtgttgagc cttgatttgg tgtggctggc ttcggacaca ttcaacggct tgatggcatt
    16441 gcccaacctg attgcacttt tattgatggc gaaagtcatc gtcaatgaaa cgcgcgactt
    16501 caaacaaaaa atcacaaacg gcgaattgcc gcattaatat ccgaggccgt ctgaatccga
    16561 atattcagac ggcacggcat attaaaaaaa gtcggaggga gaaacatgaa agtgcttgtt
    16621 ttaggtgcgg gtgttgccgg cgtgtcttcc gcgtggtatc tggcagaggc cggacatgaa
    16681 gtaacggtca tcgaccgcgc caagggtgtg gcgatggaaa ccagttttgc caatgcaggc
    16741 cagctttctt acggctatac cacgccttgg gctgcacccg gtattccgac caaagcactg
    16801 aaatggctgt ttaaaagcca tccgcctttg ctgtttcgcc ccgacggcag cctgtatcaa
    16861 atcgaatggc tgtggcggat gctgcaaaac tgcacggcag cgcactatca aaccaataaa
    16921 gagcgcatgg tcaggatttc cgaatatagc cgtgaaatgt tccgccgttt tgaagcgcaa
    16981 accggcatga attttgagga acgcaaaaaa gggacgttgc agattttccg ccaaaccaaa
    17041 gaagtcgaag cggcagaaca agacattgcc gttttggaac gctacggcgt gccgtaccgc
    17101 cgtctgaaac ccgaagaatg tgcagaattt gagcctgcgc tggcacgcgt taccgccaaa
    17161 attgccggcg gcctgcacct gcctgcagat gcgaccggcg actgccacct cttcactgaa
    17221 aacctataca aattgtgtca ggaaaagggc gtacagtttc atttcaacca aaccatcagc
    17281 cgcatcgacc ataacgggct gcgcatcaaa gccgttgaaa ccgaaacagg gcggtttgaa
    17341 gcagatgccg ttgtctgtgc gctcggctgc ttcagtagga ctgtgttggc gcagttagac
    17401 ctcgatctgc cgatttatcc cgtcaaaggc tattccttga ccctgccggt caccaattca
    17461 gacggcgcgc cggtgtccac cgttttggat gaaagctaca aagtcgccat cacgcgcttt
    17521 gacaacagaa tccgcgtcgg cggcatggca gaattgtcgg gctacgaaat caaactgccc
    17581 gaaaaacgcc gcgaaacctt ggctttggtc gtcaacgatt tgttcccgga aggcggcgat
    17641 ttgagccaag cattgttctg gagcggcctc agaccgatga cgcccgacag cacgccgtta
    17701 atcggccgca cccgctttga aaacttattc ttgaatacag gccacggcac tttgggctgg
    17761 accatgtcgc tgggttcggc aaaattaacc gccgatatcg tgagcggcaa agacaccgaa
    17821 atccgaagcg acgatttgag cctgtcgcgc tatcaggctt aagctggaaa gcgataaggt
    17881 ttagcgacat ttcaaattta aaggccgtct gaaaatcatt tttcagacgg ccttttgttt
    17941 caaaattcgg gtatccaatc aataaaataa ataataacta ttatcatacg cattaaaaag
    18001 tgttagtctg aacctgtccc agcttttagc gcaggttttc ccatgcccga tttttcgatg
    18061 tccaatttgg ccgttgcctt ttccattacg ttggctgccg gtttgtttac cgtattaggc
    18121 agcggcttgg tgatgttttc caaaacgccc aatccgcgcg tgttgtcgtt tggtttggca
    18181 tttgccggcg gtgcgatggt gtatgtttcc ctgacggaga ttttcagtaa gtccagcgag
    18241 gcgttcgctg aaatttatga taaagaccac gcgtttgcgg cggcgaccat ggcatttttg
    18301 gcagggatgg gcggcattgc gctgattgac cgtctggtgc cgaacccgca tgaaacttta
    18361 gacgcgcaag acccgtcgtt tcaagaaagc aaacgccgcc atatcgcgcg agtcggcatg
    18421 atggcggcgt ttgcgattac tgcgcacaat ttccccgaag gcttggcgac gttttttgcc
    18481 acattggaaa atccagcagt cgggatgcct ttggccttgg cgattgccat ccataatatt
    18541 ccggagggca tttccatcgc cgcgccggtt tattttgcca cccgcagccg taagaaaacg
    18601 gtgtgggcgt gtctgctatc cggcttggcc gagccgttgg gggcggcttt gggctatttg
    18661 gttttgcagc cgtttttgtc gcctgccgtg tttggttcgg tattcggcgt gatagccggt
    18721 gtgatggtgt ttttggcgtt ggacgagctg ctgccggctg ccaaacgcta ttcagacggc
    18781 catgaaaccg tttacggcct gacaatgggc atggcggtga ttgccgtcag cctggtattg
    18841 ttccattttt aaaacctgta tgccaaaggc cgtctgaaat gattcagacg gcctttttgc
    18901 gttataatcc gcacatcaaa aataacctta atttcacaaa gttccatcat gttagacaaa
    18961 tactcccccg ccgaaatcga atccaaacat tatcaaaact gggaagagca gggctatttc
    19021 caacctgata tggatttgac caaaccgtct ttttccatcc aactgccgcc gcccaatgta
    19081 accggcacgc tgcacatggg tcatgccttc aaccaaacca ttatggacgg cctgacccgc
    19141 tactaccgta tgaaaggctg caacaccgcc tggattcccg gcaccgacca cgcgggcatc
    19201 gccacgcaaa tcgtggtcga gcgtcagctt gccgcgcaaa acgtgtcccg tcatgacttg
    19261 ggtcgtgaaa aattcttgga aaaagtgtgg gaatggaaag aagtttccgg cggcacgatt
    19321 acgcagcaga tgcgccgtgt gggctgttct gccgactgga cgcgcgagta tttcacaatg
    19381 gacgatgtac gcgccgaaac cgtaaccgaa gtgttcgtac gcctgtatga acagggcttg
    19441 atttatcgcg gcaaacgctt ggtgaactgg gatccggtat tgggtaccgc agtgtctgat
    19501 ttggaagtgg aaagcgtgga agaacaaggc tctatgtggc acatccgcta tccgctggcg
    19561 gacaatcctg ccgaagccgt catcgtcgcc accacccgtc ccgaaacgct gttgggcgac
    19621 gttgccgttg ccatcaatcc cgaagacgaa cgttataccc acttaatcgg caaagaatta
    19681 atcctgccgc tgaccggccg caccattccc gtgattgccg acgaatacgt tgaaaaagac
    19741 ttcggcaccg gctgcgtgaa aatcacgcct gcgcacgact tcaacgacta cgaagtcggc
    19801 aaacgccacg atacgcgctt ggttaatgtg ttcgacttgg aagccaaagt attggcaaac
    19861 gccgaagtgt tcaacttcaa aggcgaagcg caaccaagct ttgccctgcc tgaaaaatac
    19921 gcaggcttgg accgctttgc cgcgcgcaaa caaatggttg ccgatttgca ggaacaaggt
    19981 ttcttggtcg aaatcaaagc gcacacgctg atgacgccga aaggcgaccg taccggttcc
    20041 gtgattgagc cgatgctgac cagccaatgg tttgtcgcca tgtccgccac gccaaacggc
    20101 ggcgagcctg acagcgaatt caaaggctta agccttgctg acaaagccaa aaaagccgtc
    20161 gacagcggcg cggtgcgctt tatccccgaa aactgggtca acacctacaa ccaatggatg
    20221 aacaacatcc aagactggtg catctcgcgc caactgtggt gggggcatca aatccctgca
    20281 tggtacgaca acgaaggcaa tgtgtacgtt gcccgcaatc aggaagaagc cgaaaaacaa
    20341 gccggcaaaa caggcttgac ccgagaagaa gacgtattgg acacatggtt ctcctccgca
    20401 ctcgtgccgt tctccacgct cggctggccg tctgaaaccg acgaactcaa agccttcctg
    20461 ccgtccaacg tcttggttac cggctacgaa atcatcttct tctgggtggc gcgcatgatt
    20521 atgatgacca cccactttac cggcaaagta ccgtttaaag acgtgtacat ccacggcatc
    20581 gtgcgcgacc acgaaggcaa aaaaatgtcc aaatccgaag gcaacgtcat tgaccctgtg
    20641 gatttgatcg acggcatcga cttggaaaaa ctgctggtga aacgtaccac cggtctgcgc
    20701 aaacccgaaa ccgcgccgaa agtggaagaa gcctcgagaa aactcttccc cgaaggcatt
    20761 ccgagtatgg gcgcggacgc tttgcgcttc accatggcga gctacgccag cttggggcgc
    20821 agcgtgaact tcgacttcaa acgcgccgaa ggctaccgca acttctgcaa caaaatctgg
    20881 aacgccacca acttcgtctt gatgaacacc gaaaaccaag actgcggcta cggcgcaacc
    20941 gccactgagc cgcgcggcta ttccttcccc gatatgtgga ttgtagaccg tctgaatcag
    21001 accatcgagc aagtaacgca agcctacgaa acctaccgct ttgatttggc agcggaaacc
    21061 ctgtacagct tcatgtggaa cgactattgc gactggtatt tggaacttgc caaagtgcag
    21121 cttcaaaccg gctgcgccag ccgccaacgc gccacacgcc ataccttgtt gcgcgtactc
    21181 gaagccgccc tgcgcctgct gcacccgatt atcccgttca tcaccgaaga attgtggcaa
    21241 accgtcgctc ctatgtgcga cgcgaaaacc gccgacagca tcatgctcgc ccgcttcccc
    21301 gaagccgacg gcggcgatat tgttcagacg gcattcgagc aaatgaccgt gttgcaggat
    21361 ttgattggcg cagtccgcaa cctgcgcggc gaaatgggca tccagcccaa tgtgaaagcc
    21421 ccgctgtttg tcgaaagcac ggacgacttg gcggactacc tcaaatacct gccgatgatg
    21481 acccgcctga tcgaagcaca gcaagtcgcc gccctacccg aaagcgaaga cgcgcccgtc
    21541 gccgtctgca acggcgcgcg cctgatgttg aaagtcgaaa tcgacaaagc tgcggaaacc
    21601 gcccgtttga gcaaagaagc cgagaagctg caaaaagcct tggacaaact caacgccaaa
    21661 ctctccaaac ccggctacac cgaaaaagcc cctgcgcatc tggtggaaaa agacaaagcc
    21721 gatttggcgg aattggaaga caaaatggca aaagttcaaa atcagttggc gaagttgaaa
    21781 gactgatttg attgaataaa caaggccgtc tgaaaaatgt ttttcagacg gcctctttta
    21841 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtata aatagtacgg
    21901 caaggcgagg caacgccgta ctggtttttg ttaatccact atacatggca ttgtatcggc
    21961 actgatgaaa acattcacag tgatgcaaaa gtcgaatatc ttcaggacgg cagtttccgt
    22021 ggcgatgcta tactcaaaat cgatgatgac ggcaatatct tggcataccg tgttgtcggc
    22081 tcagggaaat ggcgttttga aaacaatgcc tgcgcctagt cgcggataaa acttaccccg
    22141 tgaagctgcg actgcataat cgccgccttc atcgccgaca acgccttcgg acggacaaaa
    22201 ttgcggcggt acgccaatac gacccgtcgg cttggcggcg taccctcaaa cggaataatg
    22261 ctgaacagca tatgatcgtt ctcggtcagt gcggttgccg gcaacacgct gattgccaaa
    22321 ccgctggcga ccatatggcg gattgtattg atcgagctgc cctgcaatgt attggtcaac
    22381 ccctgtatgc gttgtttcgc cgccaattcg gaacagcttg agagtacctg atcccgcata
    22441 cagttgcctt ccgtcagcag caaaacctgc tcctcaccca gcatccgggg cgaaacggca
    22501 tccagttcct caaatgaatg ccctttcggg acaatcacga aaaacggttc gtcatacaag
    22561 ggttcggtaa caatgcccgg ctcttgaaac ggttcggcaa cgataatcgc atcaacgtcc
    22621 ccgcgtttga gcgactcggt caaagtatgc gtgtaattct cttccaacat caaaggcatt
    22681 ttcggtgcag tacggcgcaa cgagacaatc agtttcggca gcaggtacgg cgcaaccgta
    22741 aaaatcagcc cgagtttgaa cgcaccctcc agctcgtttt gttcttcatt tgccaaatgc
    22801 ctgataagct ctgcctcttc caacacctta cgcgcctgtg caacgatacg ttcccccgcc
    22861 tcggtcgtaa taatatcgtt gctgctccgg tcaaacaaag agacggcaag ctcttcttcc
    22921 aatttcttaa tggcaataga caaagtgggc tgactgacaa aacaacgccg cgccgccctg
    22981 ccgaaatgac gttcttgggc gactgcgacg atgtaccgca attcggttaa ggtcatgtcc
    23041 tatacctttt tctgttccgg caaagtaatg ttcaactcaa gcacatccat accatcctgt
    23101 ttttcctggg aaatacggat attgtctaat gaaacattca catatttgga caggacttcc
    23161 atcaactctt tacgtaaagt cggcaggtaa tccggagcct gaccttcttg ggcgcgctct
    23221 tgggcaatga tgatttgaag gcggtcgcgg gcaacggttg ccgttttctg ctttctgccg
    23281 aataaaaatt cgattaatga catatcttat cctccaaaca gacgtttgaa gaagcttttt
    23341 ttctcagctt ccaagaaacg catttcacgg ttctcgccca aaagacgggc aataacgtcc
    23401 ttatatgcct cggaagccgc cacgctgtcc tgatggatga ccggttctcc ggaattggat
    23461 gcctgcaaga cgttttggga ttcaggaatc acacccagca aaggaatatg cagaatatcg
    23521 caaatatcct gtacagacag catttcgcct tttgccacac gttcgggaga ataacgcgta
    23581 atcaacagat gttctttaac cgaaccgcct tgctctgcct tatgggattt gctttgcaaa
    23641 attcccaaaa tcctgtcgga gtcacgcaca ctggaaacct caggattggt cgttacaatg
    23701 gcttcatcag caaaatacaa cgccatcaat gcaccctgct caataccggc aggagagtcg
    23761 caaataatat actcaaagcc cattttcttg ccggacagct cctgcatcac tttttctacg
    23821 ccctcgcgtg tcaaagcgtc tttatcccga gtctgggaag ccggcaaaat aaacaggttt
    23881 tcacaatttt tatctttaat caaagcttgg ttgagcgtcg cctccccctg aatgacattg
    23941 atcaggtcat aaacgacacg acgctcgcaa cccataatga ggtcgaggtt acgcaaaccc
    24001 acatcaaaat caattaccgc agttttatat ccgcgtaatg ccaaacctgt cgcaatactg
    24061 gcactggtag tcgttttacc gacaccgccc ttacctgaag ttactacaat aatttttgcc
    24121 acaatatttc ctttttaaat atcaaacaat tactctgagc caattgcact gataaccaat
    24181 cggttatcct gcaacaatat ctgtaccggc tgcttgtgca gatggttcgg caaatcctgt
    24241 tcaaaattac ggtaaatacc cgccacagaa accagttctg cctgcatgga gtggataaat
    24301 atgcgggcag aagtatcacc cttggcaccg gccaaagcac gccccctcat cggcgcataa
    24361 atatgtatat tgccatccgc aatcaattcc gccccctggc tgaccgcccc cgtaacaatc
    24421 aaatcgccat cttcggcata aacctgctga ccggtacgga caggggatgt aatcaatact
    24481 gttttccttg ctttctgacc atcctccgtg ttctgcacct caacctgacc cagttcttta
    24541 acattttccg aatgagacag acaaaacagc aaatgatact tcatagccgc agcagcccaa
    24601 cgttcattag aatgcttcag acccaaaatt tgcataccat gccttgaaaa caacgaaacc
    24661 aatgcagcaa gatccaaaga ctcgggataa tcaaactctt gaacatccag cacaaatgga
    24721 acaacaccag actcttgaaa cttcttgccc aatttgacca gcacatcttc caaatcaaac
    24781 aagtctgacg tatgcaaaga tatagacaat acgtccatct ttgtcgactt tatatcgaaa
    24841 gcattcatta tataaaccat catagaattt tttaatgatg taagtttacc gcgcaaacct
    24901 tagctattca attaatattt taaacatgat agccaatacc ctattaccta tcagatattg
    24961 caaaaataac gccacctgct tttcggcaga tggcgttata tgactaaaat tactcagcag
    25021 ccggtttgtc aaccaattca accagtgcca gaggtgcatt atcaccttta cggaatccgt
    25081 atttcaacac ccgaacataa ccaccgttac gagcagtaaa acgaggaccc aaatcgccaa
    25141 acagttttac tacaacatca cggtcgcgag tacggtcaaa tgccaaacgg cggtttgcca
    25201 atgacggctt tttacccaat gtaatcaacg gctctactac acggcgcaat tccttggcct
    25261 taggcagagt tgttacaata gtttcgtgag tcaataatga attcgccata ttacgcagca
    25321 ttgcagcacg atgactgctg gtacggttta atttgcgatt gccattacga tgacgcatat
    25381 caattatcct ttaattcttc attaaggctt ttccaagcct acaggtggcc atgcttccaa
    25441 cttagaaccc agtgtcaaac ctttagatgc caatacttcc ttaatctcat tcaaagattt
    25501 acgtcccaaa ttcggcgttt taagaagctc ggtttcagtg cgttgaatca aatcgccaat
    25561 ataataaata tcctcagctt tcaaacaatt agctgaacgt actgtcaatt ccagatcatc
    25621 caccggacgc aaaagaacag ggtcgatagg aggtgctttt tcttcaacct cctccacagg
    25681 cgtaccctgc aaatcagcaa aaatagacat ctgatcaatc aaaatacgtg ccgcactgcg
    25741 tacagcttcc tcaggatcaa tagaaccgtc ggtttcgata tccaaaacca acttatcaag
    25801 atccgtccgc tgctctacac gtgcaggttc aacctcaaag ctaacacggc tgatgggcga
    25861 aaagctcgca tccaactgga ttgcaccaat ctgacggttc tcatcacgaa ctacctgacg
    25921 acctgaaaca gattgataac cacgaccttg ctctacttta atttccatct caatttgacc
    25981 gttatcagcc aaatgacaaa tgacatgacc aggattcaga atttctacat catgcggcaa
    26041 ctcaatatca ccggcagata cgacacctga acctgatttc ttcaacacaa gttgaacttg
    26101 gctacgacca tggagtttaa acacaatacc tttaatattc agcaaaatgt caacaacatc
    26161 ttcctgaata ccatcaacag tagaatattc gtgtaataca ccggcaatag ctacttcagt
    26221 aggagcaaaa ccattcatgg atgacagtaa gatacggcgc aaagcattac ctaaggtatg
    26281 accgaaacca cgttcaaatg gctgcataga tacttttgca cgagttgcag aaaaagtatt
    26341 tacatcaatt tgacgaggtt tcaaaaattc ggttgtgcta ttctgcattt aactgtccct
    26401 cactgagcta gcattattta gagtagaact ctaccaccag ctgttcatta atatcaccgg
    26461 tcaattccga gcgatccggc atgtttttga acacaccctc aagtttatcc gcatctacag
    26521 aaacccaacc cggcaagccg atttgagttg ccaaacccaa tgcttcttga atacgtacct
    26581 gttttttggc tttttcacga actgagacaa catcaccagc tttcacttgg aaagaaggaa
    26641 tattgacaac ttgtccattc acaactatcg ccttatgaga aacaagctgt cttgcttcag
    26701 ctcgggtaga accgaaaccc atacgataaa cgacattatc caaacgagat tccagcaact
    26761 gcaacagcaa ctcgccggta gaacctttac gacgatcagc ttctgcgaaa taacgacgga
    26821 actgacgttc taatacgcca taaatacggc ggattttttg tttttcacgc aactgcaaac
    26881 catagtctga caaacgcggt ttttttgcac catgctgacc aggagcggaa tcaattttac
    26941 atttagaatc caaagagcgg cgcgcactct tcaaaaacaa atccgtacct tcgcgacgtg
    27001 ccaacttaca tttagggcca atataacgtg ccatgtttca aatcactcca atattaaata
    27061 cgacgttttt taggcggacg gcaaccgtta tgaggcaacg gggtaacgtc agtaatgctg
    27121 gtaatcttga aaccaagagc attcaaagca cgtacagagg attcgcgacc tggacctgga
    27181 cctttaatac gaacctctaa atttttaacg ccatactctt gggcaacttt accagctgct
    27241 tctgctgcaa cttgtgctgc aaatggtgta cttttacgag aacctttaaa accagcgccg
    27301 ccagaggtag cccaagacaa cgcattgcct tgacggtcag tgattgtaat gatggtattg
    27361 ttgaaagatg catgaacgtg cacaataccc tcactcacgg ttttacgtac ttttttacgt
    27421 acacgtgaag ctgtgtttgc tttagccatt aataaaattc cttaaaattt atttcttacc
    27481 agcaatcgct ttacgcggac ctttgcgggt acgcgcattt gtacgagtgc gttgaccgcg
    27541 gcatggtaag ccgcgacgat gacggaagcc acgatagcag cccatgtcca tcaatcgctt
    27601 gatactcata gttacctcac gacgcaaatc accttctact tcatacttgg caacttggtc
    27661 acgcaaagca tctaattgag tctcgtccaa atcttttgct ttagtatcag gcgcaatatt
    27721 tgcagcctca caaatcaatt tagcacgagt agcaccaata ccgtaaatag cctgaagacc
    27781 aattacgatg tgtgcgttat tagggatatt tacccctgca atacgagcca tattttttcc
    27841 tttttagggc aaagtgtgtc actatatcac agaatcacat taaaagaaat attccattaa
    27901 ccttgacgct gtttgtgacg gagatcagta caaattacac gaactacacg atttcgacga
    27961 ataatcttgc aatttcggca aattttctta acagatggtt gtacacgcat tttattttcc
    28021 ttttattggt ttatcttgct ctgaaaacga ttcgagccct agttagatca taaggtgtca
    28081 gctctactgt gaccttatct cccggagaaa tacgaatgta atgcatccgc atcttcccag
    28141 aaatatgacc caatacaata tggtcattct caagttttac tttaaatgtt gcattaggta
    28201 aagtttcaag aatttcacct tgcatttgga tagtatcttc tttcgccata attctatttc
    28261 cgagaaaatg atttcatttc tgaacgagtc attaacttat catactgttg agtaagccta
    28321 tacgaattta tttgtgtact aaaatccatc gttacaacaa ctagaatcaa caaagacgtg
    28381 ccacccaaat aaaaaggtac atttaaaacc gtagttaaga actctggaat taaacaaata
    28441 gttgtaatat aaagagctcc aaacaatgtc aaacgtaata caactttttc taaataccta
    28501 gaggtctgct caccaggtct aatcccagga acaaaagcac cactcttttt taaattctct
    28561 gccatttctt tagggctaaa aaccaaagcc gtataaaaat aacaaaagaa aataactgtc
    28621 gctgcaaata aagccatata cagcaattga ccgtgttgta acaatccagc tattttgtgc
    28681 aaaacactat ttgtatcagc cgaaccaaac caacctaaaa gagtagatgg aaatagaata
    28741 atactggaag caaaaattgg gggaataaca ccagccatat tcaacttgaa aggcatatgc
    28801 gtattttgac tacccgccct accattaaac tggcgttttg cataatgaat aggaatcttc
    28861 cgctgtgcac tttcaaagta tacaaccaaa taaattaata ataaggcacc aaatacaata
    28921 aacaacgccg taagcatgct catagaacct tggttcgtca gtgtaaccag ctttgcaata
    28981 cccgaaggaa tacctgaagc aatacctgcc gtaatgatta aagaaatacc gttcccgata
    29041 cccctttcag taatttgctc cccaagccac ataagaaaca tggttcccgt taccaaagaa
    29101 actaccgtgg aaacatgaaa ctcaaatgaa cttgttacaa caattccttg ctgaaatacg
    29161 aaagatgcaa cacctagact ttgaagaatt gctaacaaaa cagtaccata cctagtatat
    29221 ttcgtaatta cctttctacc agcctcccct tcttttttta aagccttcaa tgatggcaaa
    29281 atttcagaag cgagctgtac aataatagaa gctgaaatat atggcataat tcctattgca
    29341 aatatactaa agcgctctaa cgacccaccg gaaaacatat tcaatattcc caggatgccg
    29401 tttccagcgc tttcgtataa tttagctaaa gcaacagcat caactccagg tacgggtata
    29461 tgggcaccaa ttcgaaaaac aatcaatgct ccaaatagaa acaaaagacg tttcttaaga
    29521 tctccaaatt tggatgaacc tgatgacgtt tgttgattag ccacaatatt aaaccttaca
    29581 tttcaatctt accaccaaca gcctcgatag cagctctcgc acctttggta actttaatac
    29641 ccttcaaagc aactgcctta gaaatttcac cagaagcaat aactttaaca ttagagactg
    29701 tagatgcaat cagacccgct tgctttaaga ccaaaatatc aatctcatta acagcaattg
    29761 attccagttc acttaaacga agctgtgcat tagctgatgc tgttaaagat ttaaaacctc
    29821 ttttagggag gcgtcgttgc aagggcattt gaccaccctc gaaacccacc ttatgaaacc
    29881 caccagaccg actcttttga cctttatgac cacgaccacc cgttttgcca agaccactac
    29941 caataccgcg tccaacacga cgaccagcat gcgtagcacc aacagcaggt tgaattgtat
    30001 tcaaaaacat atcaagactc cactttcaac aagtagctga ttttattaat cataccacgg
    30061 ttttcagggg tatctaaaac ctctaccgta tgctcgcgac gacgcaaacc taaaccgcgt
    30121 gcacatgcac gatgagattc aattgtacca atcaggcttt taaccaatgt aaccctaatc
    30181 tttttttgtt cagccatggt taactcccaa aatgtcttcc actgtcaagc cacgtttggc
    30241 tgcgatatca gcaggagtat gcaacttaga caaaccatct aatgttgcac gtacgatatt
    30301 atatgggtta gtagatccgt gcactttggc ggagatatta tgaatgccca tagcatcaaa
    30361 aaccaaacgc ataggtccac cggcttttac gccactaccc tctttagcag gctgcataaa
    30421 tactttagta gcaccatgtc gaccaataac ctcatgatga atcgtaccat tttttaatgg
    30481 taccttaatc atagagcgtc gtgcttgatc catcgccttt tggactgcaa caggcacttc
    30541 ttttgactta cctttaccca taccaatacg accatctcca tcaccaacaa cagttagcgc
    30601 agagaaagcc ataatgcgac cacctttaac tactttggtt acacggttaa ctgcgaccat
    30661 cttttcaatc agaccgtcac cgcgttcttc aatttcatgt tttgccatct gaaagtctcc
    30721 aaatatttag aagcttaaac cattttcacg agcagcttca gccaaagcct tcacacgacc
    30781 gtgatattgg aaacctgaac gatcaaaagc aaccttttct acacctgctg ctttagcctt
    30841 ctcagcgata cgtttaccaa ctattgcagc tgcttcaaca ttgcttccag atttcagact
    30901 accgcgcacc tcagcttcca atgtagaggc ttgagccaat actttatcac cttcagcact
    30961 aattacttga gcataaatat gattattgct tcggaacaca cataatctta ccattttcaa
    31021 gtccgcaata cgagcacggg ttttgcgtgc acgacggagt cgggttgtat gtttatccat
    31081 tagtgaacct caattatttt ttcttggctt ctttcattac cactacttct cctacatagc
    31141 gaacaccttt acctttataa ggctcaggag cacggaacgc acgaatctca gcagcaactt
    31201 gaccaacaac ttgtttatcc gagccggtta aaacaatctc tgtttggcta ggagtttgaa
    31261 cggagacacc ttcaggcatt tcatatacga tcggatgaga aaaacccaaa gacagattca
    31321 agattttacc ttgtgcttga gcacgataac ccacacctat caattgcaat cttttctcaa
    31381 aaccttctga aacaccttta accatattgc tgactaatgc gcgagcagta ccagacattg
    31441 catttgcttg tttactgctg ttattcgcaa caaaagccaa tttgccatca ttaaattcaa
    31501 tggctacatc agaatgcaaa ggaaaagaca attcaccgtt cttaccctta ataactaatg
    31561 cctctgttcc aaattttact tctacaccag cgggaacagt cactgggttt tttgcgacac
    31621 gtgacatttc ttttcctcca ctaggctaca atgcataaca actcaccacc aacaccttga
    31681 gaacgtgctt tacgatcagt cattacacct ttagaagtac taacaatagc aatacccaag
    31741 ccattcataa cacttggaat ctcactagac gctttataaa tacgcaaacc ggggcgagat
    31801 acacgcttga tttgttcaat tacaggacga cctgcatagt attttaattg aatttccaat
    31861 atagacttta cgtcagatga aactgcgaag tcctcaatat atccttcttc tttcaatacc
    31921 tttgcaatag cacactttaa ttttgaagaa ggcattgcaa ccgctgcttt attagcacgt
    31981 tgcgcattgc ggatacgagt caacatatcg gaaataggat catgcatact cattcttaat
    32041 tactcctatt accagctggc tttaacaaca cccggaattt cgccacgcat ggcgatttca
    32101 cggattttaa tacgacccaa accaaattta cggaaagtac cacgagggcg acctgtcaaa
    32161 gcacaacgac gacgttgacg cacaggtgcc gcattacgag gaatggattg aaacctcaaa
    32221 cgagcctcaa aacgctcttc ctcagttgca ttcgaatcat tgattaccgc tttaattgcc
    32281 gcgcgtttag ccgcatattt tttagccaaa gcttgacgtt tcagattacg attaataagt
    32341 gctttcttag ccatgattat cctttgaacg gaaatttaaa caatgacaat aaagctttcg
    32401 cttcctcatc ggtttttgct gtagtagtaa tagtaatatt caaaccacgc aaagcatcaa
    32461 ttttatcgta ttcaatttcc ggaaaaataa tttgctcacg aacacccata ttgtaattgc
    32521 cacggccatc aaatgattta ccgctcacac cacggaagtc acgtacgcga ggtaatgcaa
    32581 tagtaatcaa acgatccaag aattcaaaca tttgatcacg acgcaatgtt actttgcaac
    32641 caaccggata gttatcacgg attttaaaac ctgcgataga tttacgggca acagtaacaa
    32701 ccggtttttg accggcaatt ttctctaaat cggaaacagc atgttccata acttttttgt
    32761 cagcaacagc ctcacccaca cccatattca aggtgatttt ttcaatacgc gggacttcca
    32821 ttactgattt gtaaccaaat tgtttaacca attcaggaac aactgtctct ttataaaact
    32881 ctctcaaccg agccatgtta tctccttatg ccccaatgat agagccattt gatttgaaga
    32941 aacgaacgcg tttaactttg ccttcatttt caatcagctt aataccaaca cggtccgctt
    33001 tattagtttc cggattcagg attgcgatat tagaaatatc caaaggcatt tctttagtaa
    33061 taataccgcc ctcaatgcca cgcattggat taggtttttg atggcgtttt acaacattaa
    33121 cgccctcaac aacaacttta tcacccaaca ctcgaactac ttgaccctgc ttacctttat
    33181 ccttaccagc aattactaca accctatcgc ctttaatgat tttattcatc gtgccattcc
    33241 ttataatact tcaggtgcca atgaaacgat tttcataaat cgctcagtac gcaattcacg
    33301 ggttaccgga ccaaagatac gagtacccaa aggttcaagt ttattattca gtaacacggc
    33361 ggcattgtta tcgaatttaa ttaacgcacc atcaggacga cgtacaccct tagcagtacg
    33421 aacaactacc gcattatata catcgccttt tttgacacgg ccacgcggag ccgcatcttt
    33481 aactgccact ttaataatat cgccaacaga agcgtagcga cgcttagatc cgcccaatac
    33541 cttgatacac attacgcgac gcgcaccaga gttatcagcc acatctaaga tggtctgcat
    33601 ttgaatcatg ttattacctt taaattaacc aacttaattt accactttca gataacttac
    33661 agcaaagccg ctgcttatta aatgaaacct tgcggttcaa gtaaaccagt cttggacccc
    33721 gaaagggaag aaacttccag aagaaactga aagacaggaa acgaagttta cacgcaaatt
    33781 aaatttgctg caatacttcg tttcccattc caagcacgtt gctttaattc ttaaatagaa
    33841 cgtgctttct caaccagctc actgacaacc caagatttag tttttgacaa tggacgggat
    33901 tccgatataa caaccacatc accaattcca tattgattat tttcatcatg ggcatggatt
    33961 ttagtagata accgaataat cttaccatac agcggatgtt ttactttacg ctcaaccaat
    34021 actgttacgg ttttatccat tttgtcgctt actactttgc cttgcaaagt acgaacattt
    34081 ttagtttcgc tcattactta gcaccttttt cagttaaaac ggttttaata cgagcaatat
    34141 cgcgacgtac acgtttcaat tcacttggtt tgcctaattg accggtagcg ttttgcatac
    34201 gtaagccaaa ctgagctttc aacaagtcca acaaatctgc attcaactgc tcaacggatt
    34261 tgtctttcaa ttcatttgct ttcattattg acccacctgt cttactacaa aggttgtagg
    34321 aataggcaat ttggcagcag ccaactcgaa tgcttcacga gccagttcct ctggaacgcc
    34381 atccatttca tacaacactt tacctggttt aatttcggca atgtaatatt ccacgttacc
    34441 tttaccgcca cccatacgaa cttgaatagg cttttcagta atcggtttat cagggaatac
    34501 acgaatccaa atacgaccac cacgtttgat atgacgggtc attgcacgac gagcagcttc
    34561 gatttgacgg gcagtcaaac gaccacgacc tacggctttc aagccgaact caccgaaact
    34621 taccttatta ccgcgagtag cgatgccagt attgcgaccc ttttgttgct tacggtattt
    34681 cagtctagtt ggctgcagca ttacgtctac ctgcctttct ttgtttactc tcatgttcag
    34741 gtttggaaga tttaatattg ccttccgtat aaacccaaac tttcagaccc aatacaccat
    34801 atgtggtgtg cgcttcgctg gttgcataat ctacatttgc acgtaaagta tgcaatggca
    34861 cgcgaccttc acgataccat tcgctacggg caatatccgc accattcaga cggcctgaag
    34921 tcataatctt aatgccttta gcaccagaac gcattgcatt ttgcattgct cgtttcatag
    34981 cacgacggaa ttgaacgcgc ttttccaact gctgggcaat accgtcagca ataatttgag
    35041 catccaactc aggacggcgg atctcttcaa tatttacatg aacaggtaca cccatcaaga
    35101 cttgcaagtc acgtttcaaa acctcgatat cctcaccttt tttaccgata accacacccg
    35161 gacgagcgga gtgaatggta atgcgtgcag attttgcagg gcgttcaata accactcgac
    35221 caaccgaagc attggccaat ttttgacgca aataattgcg aacatcgata tcctgcttca
    35281 aaacagtaga aaagtcggtg cttttagcaa accattttga agcccagtct ttagttaccg
    35341 ccaggcgaaa gcctgtaggg ttaatctttt gtcccatagc ttttccttag ttacccactg
    35401 tcacattgat atgacaagtt tgtttttcga tgcggttacc gcgacctttg gcgcgagctt
    35461 gaaaacgttt caagcttggg cctttgtcaa caaagatagt taccactttc agttcatcaa
    35521 tgtccgcacc gttattgtgc tcggcattag caatagctga ctccaatact tttttaatca
    35581 gctcggcacc ttttttagga ctgaaagcca aaatattcaa agcttgggca acgtctttac
    35641 cacgaatcaa atcagctacc aaacgagcct tttgagcaga gatacgggca tttttatgtt
    35701 gtgcatttac tctcatgatt caccttattt ctttttagcc tttttatcgg ccaagtggcc
    35761 tttaaaggta cgggtcaatg agaattcgcc taatttatga ccaaccatat tgtcgctgat
    35821 aaacacaggc acatgggtgc ggccgttgtg cacagcaatg gtcagaccga taaaatcagg
    35881 cagaatggta gaacgacgag accaggtttt aatcgggcgt ttgtcgttgc ttgcgcgagc
    35941 agcatctact tttttcagca aatgcaggtc tacatatggg ccttttttca atgaacgagc
    36001 catactaaat taacctttat ttgagtaacg gcgacgaaca atcatgttat ccgtgcgttt
    36061 gttattacga gtgcggtagc ctttagcagg agtaccccat gggctgaccg gttcgcgggc
    36121 ctcgcccgta cggccttcac caccaccatg cgggtgatcg acaggattca tgacaacacc
    36181 gcgtacggtc ggacgaatac cgcgccaacg gttggcaccg gctttaccga tttttttcag
    36241 gctttgctct tcgttaccaa cttcaccgat ggtcgcacgg caatttacgt tgattttacg
    36301 gacttcgcca gagcgcagac ggacttgagc gtacgcgcct tctttagcca gcaataccgc
    36361 agaagcaccg gcagaacgtg cgatttgagc acctttaccg ggtttcattt cgatacagtg
    36421 gatagtcgta ccaacgggaa tgttgcggat cggcagggtg ttgcctactt tgatggcagc
    36481 ttcagcgccg gaaactaata cagcaccggc ttgaataccg cgaggagcaa tgatgtaacg
    36541 acgctcgccg tctgcatagc acaacagtgc gatgaaggca gtacggttag gatcgtattc
    36601 gatacgctct actttagcag gaatgccgtc tttgttacgt ttaaagtcta caacacggta
    36661 atggtgttta tgaccgccgc ctttgtgacg ggtggtgata tgaccattat tgttacggcc
    36721 ggcagtagaa tttttctttt caagcaaggg tgcataaggt gcacctttgt gcaaaccttc
    36781 tgttaccacg cgaaccatgc cgcgacggcc tgcagaggtc ggcttcattt taacgattgc
    36841 cattttgttt attccttatc tgcagctgca gcagcggctt ccaaatccaa ctcttgaccg
    36901 gcagccaagc ttacataagc ttttttaaca tcgctgcggc ggcccaaagt acgaccaaaa
    36961 cgcttagttt tgcctttagt tgtaacggta gttacagaag caacttgaac accgaacagc
    37021 agctcgacag ccgctttgat ttcaggtttg gctgcatttg ccaaaacttt aaacgtcatt
    37081 tggttgcgtt tttcagccaa tacgttgctt ttttcagaaa cgataggtgc caaaatcact
    37141 tgagtcaaac gttgttgatt catacccatt gctcctctaa ttgtgcaact gcatctttag
    37201 tgatgattac ttttttgtaa cgcagcaagc tgtaaggatc aacttgttga gcttccaaaa
    37261 ccaacacgtt tggcaagttg cgtgaagcca agtaaacatt ctcgtcgagc tgtttggtta
    37321 caaacaacac ttgctccaga cccagatttt tcacttgttc ggcaaaaact ttggttttag
    37381 gagtttcggc agtcaacgcc tcaatcgcaa acaaacgctc gtcacgagtc aattgggaca
    37441 gaatagtcgc cataccggca cggtacattt tgcggtttac tttttgagtg aagttttcgt
    37501 cgggtttgtt cgggaacgcg cgaccacctt tacgccacag cggagaagaa gtcataccgg
    37561 aacgggcacg gccggtacct ttttgacgcc atggtttttt ggttgagtgt tttacttcgg
    37621 cacgggtttt ttgagcgcga ttgccggagc gggcgtttgc caaataggca tttaccagct
    37681 gatgaaccaa cgcttcattg tattcgcggg cgaacaaagc atcagaaaca gacagactgc
    37741 ctgaaacttg tcctttagcg tcaattactt tcaattccat tacgcaccta ctttcacgct
    37801 gggacgaact acaacatcgc tgttgaccgc acctggaaca gcacccttaa ccaacagcag
    37861 ttggcgttct gcatcaacac ggacaacttc caatttttga acagttgctt tggtgttgcc
    37921 gtattggccg gccatgcgtt taccggggaa cacgcgaccc gggtcttgcg ccataccgat
    37981 agagcctgga acgcggtgag agcgggagtt accgtgggaa gtacgttggg caccgaagtt
    38041 atgacgtttg atcgtaccgg agaaaccttt acctttagag gtaccggtta catcgaccag
    38101 ctggccgact tcaaacatag aaacggtgat ttcgtcaccg gctttcaatt cagccagttt
    38161 ttcttcagtc aaagcaaact caatcaaacc gcgaccggct tcaacacctg cttttgcaaa
    38221 gtgcccggct tcggctttat tgacacgatt ggcttttttc tgaccaaagg taacttgaac
    38281 ggcagtatag ccgtcagtat ctttggattt tacttgtgta acgcggttgg cagacatatc
    38341 caaaacggtt accggaacag aaacaccctg ttcgtcgaac acgcgggtca taccaacttt
    38401 gcgtccaacc agacctaaag tcatgattat tttcctttta aagtaaaggg acaggctacg
    38461 attggcctgt ctttcagaca aagttaaact tggcacaaat gtaccaagct cggcattata
    38521 tctgacaagt caaagaaata tcaacagaaa tatcagaaat atcttcaata tgccgtctga
    38581 agcgttttga attttcagac ggcatagggt cggactcttt taaagggtcg gtatccggtc
    38641 atcacagcgt atgcatcttt ctccgacaaa ccggaatatg gttgatgact gcatccatta
    38701 tttctttgag atggtagttt tcgtatgctg ggacctttgc aaaattcctt tccctcccga
    38761 cagccgaaac cccaacacag gttttcggct gttttcgccc caaatacctc ctaattctac
    38821 ccaaataccc ccttaatctt ccctggatac ccgataatca ggcatccggg ctgcctttta
    38881 ggcggcagcg ggcgcactta gcctgttggc cgctttcaac aggttcaaac acatcgcttt
    38941 caggtggctt tgcgcactca ctttgagcag cccgaaatag gctgcccgcg catagcggaa
    39001 tttacggtgc agcgtaccga agctttgttc gaccacataa cggggcttcg acaaatatcg
    39061 gttgcgtttg gtttgcgctt ccgacagcgg acggttgcgg caggctttgc gcataatgcc
    39121 gtccagcaac tgatgttctt tcagatgttg ccggttttcc gcactgtcat agcctttatc
    39181 ggcatagatg gtcgtacctt tgctcgatcg gctgccaatc aatcacttga tccaacttca
    39241 atagcgggaa acggtcgatg tgtttggcaa tcatggcttg tgcggtttgt tgaaagaagg
    39301 tgctcatgag aaatccccta aatgtcttgg tgggaattta ggagattttg gggaattttg
    39361 caaaggtctc ggcataacat aaaaaatccc caagcattga ttgcttgggg attttcaata
    39421 gtccgaatta ttggactttg atttctacat caacaccggc cgacaaatcc agcttcatca
    39481 gcgcatcggt agttttatcg gtccaatcca cgatgtccat caggcgcaag tgggtgcgga
    39541 tttccaattg ttcacgggaa gttttgttca cgtgcggaga acgcaaaatg ttgaaacgct
    39601 cgattttggt cggcaaagga atcgggcctt ttacaacggc accggtacgt tttgcagttt
    39661 caacgatttc ttgtgcagaa cggtcaatca gggcgtaatc ataagctttc aggcggatac
    39721 ggattttttg gtttgccatt tatcaatatc cttca
//
LOCUS       DAXHKG010000002        39254 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.002, whole genome shotgun sequence.
ACCESSION   DAXHKG010000002 DAXHKG010000000
VERSION     DAXHKG010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 39254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39254
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.002"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..761
                     /gene="mafB"
                     /locus_tag="ACFMWP_000057"
     CDS             <1..761
                     /gene="mafB"
                     /locus_tag="ACFMWP_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC5890731.1"
                     /translation="GIGDILYGTRYAIDKAAMRNIAPLPAEGKFAVIGGLGSVAGFEK
                     NTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDFSAAYNTRT
                     TRKVTTETEGLNRIRQNQKNSNIHEKNYGRDNPNHINVLSGNSIQHILYGDEAGGGHL
                     FPGKPGKTTFPQHWSASKITHEISDIVTSPKTQWYAQTGTGGKYIAKGRPARWVSYET
                     RDGIRIRTVYEPATGKVVTAFPDRTSNPKYNPVK"
     gene            776..1006
                     /locus_tag="ACFMWP_000058"
     CDS             776..1006
                     /locus_tag="ACFMWP_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC5890732.1"
                     /translation="MKTLDERIKNLGKSLEDRIDANLIDAALEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
     gene            1155..1832
                     /locus_tag="ACFMWP_000059"
     CDS             1155..1832
                     /locus_tag="ACFMWP_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
                     /protein_id="HFC5890733.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTARYGNPYQ
                     ETVYIEISDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLYSESGKTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGNRAETEGVWVHNECPPRKTPSTPIYGNDSEAYAAAK
                     ELGYRKIKERTRNDAAIFKKGKSYISRDVDSHNGGAWKEASSPEKLNRKETRNGTFDK
                     NLNRIGD"
     gene            1838..2245
                     /locus_tag="ACFMWP_000060"
     CDS             1838..2245
                     /locus_tag="ACFMWP_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC5890734.1"
                     /translation="MCEFKDFRRNIPCFKEYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRDIVIGIGTIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFR
                     VMLRYIFTDLDVEDWKFFYFPIQNSKGRLRRKV"
     gene            2267..2644
                     /locus_tag="ACFMWP_000061"
     CDS             2267..2644
                     /locus_tag="ACFMWP_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC5890735.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRYVVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGINERYERLK
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            2686..2958
                     /locus_tag="ACFMWP_000062"
                     /pseudo
     CDS             2686..2958
                     /locus_tag="ACFMWP_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
     gene            3146..3601
                     /locus_tag="ACFMWP_000063"
     CDS             3146..3601
                     /locus_tag="ACFMWP_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890736.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVEKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            3670..4047
                     /locus_tag="ACFMWP_000064"
     CDS             3670..4047
                     /locus_tag="ACFMWP_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC5890737.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENAL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFTIKSSPWLPKSVKIDERYERFR
                     VMLRYIFTEIDIVNVRFDYYNKK"
     gene            4131..4625
                     /locus_tag="ACFMWP_000065"
     CDS             4131..4625
                     /locus_tag="ACFMWP_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890738.1"
                     /translation="MENRFKKIVKDILSFAQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEMFKMSVLEDWERSGKPLDWKKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            4745..5878
                     /locus_tag="ACFMWP_000066"
                     /pseudo
     CDS             4745..5878
                     /locus_tag="ACFMWP_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5965..6240)
                     /locus_tag="ACFMWP_000067"
     CDS             complement(5965..6240)
                     /locus_tag="ACFMWP_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890739.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDTNLNGLNLWMKKGVENLWDDTVGKKTRLMCISVFWIVVFNL"
     gene            complement(6257..7024)
                     /locus_tag="ACFMWP_000068"
     CDS             complement(6257..7024)
                     /locus_tag="ACFMWP_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HFC5890740.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNLEPMTGFE
                     HTVTFDFQGIKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINLIEISVYYKKTDQGW
                     VLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNYHRYGENDYSTSVGSCINGFTVR
                     YYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK"
     gene            complement(7436..7711)
                     /locus_tag="ACFMWP_000069"
     CDS             complement(7436..7711)
                     /locus_tag="ACFMWP_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC5890741.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(7708..8991)
                     /locus_tag="ACFMWP_000070"
     CDS             complement(7708..8991)
                     /locus_tag="ACFMWP_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC5890742.1"
                     /translation="MTVSKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVTAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(8995..9120)
                     /locus_tag="ACFMWP_000071"
     CDS             complement(8995..9120)
                     /locus_tag="ACFMWP_000071"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890743.1"
                     /translation="MPSEHSFRRHFAFERQNGGAGAVFFSGWAIFATIGFYFLAV"
     gene            complement(9145..10563)
                     /gene="glnA"
                     /locus_tag="ACFMWP_000072"
     CDS             complement(9145..10563)
                     /gene="glnA"
                     /locus_tag="ACFMWP_000072"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HFC5890744.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDCGQDLRSAMVNILEGLGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            complement(10837..11214)
                     /locus_tag="ACFMWP_000073"
     CDS             complement(10837..11214)
                     /locus_tag="ACFMWP_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HFC5890745.1"
                     /translation="MKKMLCLAVFALGLATPAVAADWVLVDSNTATFGDADSRTDNSA
                     WFETRFAKPQKYGNGKFFNTAKTLEEMDCSGKRFRILTATWYSKSGNSIASYTPSYAE
                     WNYVIPGTLGEAQYKFVCNGYPR"
     gene            11385..12194
                     /gene="aroE"
                     /locus_tag="ACFMWP_000074"
     CDS             11385..12194
                     /gene="aroE"
                     /locus_tag="ACFMWP_000074"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HFC5890746.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            12196..12897
                     /gene="mtgA"
                     /locus_tag="ACFMWP_000075"
     CDS             12196..12897
                     /gene="mtgA"
                     /locus_tag="ACFMWP_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HFC5890747.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDAHFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(13100..13175)
                     /locus_tag="ACFMWP_000076"
     tRNA            complement(13100..13175)
                     /locus_tag="ACFMWP_000076"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13140..13142),aa:Phe,seq:gaa)
     gene            complement(13366..14100)
                     /gene="lptB"
                     /locus_tag="ACFMWP_000077"
     CDS             complement(13366..14100)
                     /gene="lptB"
                     /locus_tag="ACFMWP_000077"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HFC5890748.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEISTKDKSRIDGEVEKLLADLNIERLRNNPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGTV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(14174..14704)
                     /gene="lptA"
                     /locus_tag="ACFMWP_000078"
     CDS             complement(14174..14704)
                     /gene="lptA"
                     /locus_tag="ACFMWP_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HFC5890749.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(14685..15266)
                     /gene="lptC"
                     /locus_tag="ACFMWP_000079"
     CDS             complement(14685..15266)
                     /gene="lptC"
                     /locus_tag="ACFMWP_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HFC5890750.1"
                     /translation="MKIRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(15263..15799)
                     /locus_tag="ACFMWP_000080"
     CDS             complement(15263..15799)
                     /locus_tag="ACFMWP_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HFC5890751.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(15864..16838)
                     /locus_tag="ACFMWP_000081"
     CDS             complement(15864..16838)
                     /locus_tag="ACFMWP_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HFC5890752.1"
                     /translation="MAENGKYLDWAREVLHTEEEGLREIATELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            16935..17990
                     /gene="tal"
                     /locus_tag="ACFMWP_000082"
     CDS             16935..17990
                     /gene="tal"
                     /locus_tag="ACFMWP_000082"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HFC5890753.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKQQDLTPKQRYETMAVADVQAACDVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWAQYFGSPEFAALETQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAETAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            18005..18139
                     /locus_tag="ACFMWP_000083"
     CDS             18005..18139
                     /locus_tag="ACFMWP_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890754.1"
                     /translation="MPSERLSDGIARLTGHSAAYQGFTLKILMGKKLMHDITHQHKRK
                     "
     gene            18144..18434
                     /locus_tag="ACFMWP_000084"
     CDS             18144..18434
                     /locus_tag="ACFMWP_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890755.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            18451..19338
                     /gene="gluQRS"
                     /locus_tag="ACFMWP_000085"
     CDS             18451..19338
                     /gene="gluQRS"
                     /locus_tag="ACFMWP_000085"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HFC5890756.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLQTAGLVYPCHCSRK
                     DWQAAAVHGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMGKVPKHAITTP"
     gene            complement(19408..20418)
                     /gene="dusA"
                     /locus_tag="ACFMWP_000086"
     CDS             complement(19408..20418)
                     /gene="dusA"
                     /locus_tag="ACFMWP_000086"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HFC5890757.1"
                     /translation="MNDNTHTLPPRHLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(20449..20940)
                     /gene="dtd"
                     /locus_tag="ACFMWP_000087"
     CDS             complement(20449..20940)
                     /gene="dtd"
                     /locus_tag="ACFMWP_000087"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HFC5890758.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(21014..21772)
                     /locus_tag="ACFMWP_000088"
     CDS             complement(21014..21772)
                     /locus_tag="ACFMWP_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC5890759.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRNPVKLGERYYLFKLSVVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(21843..22709)
                     /locus_tag="ACFMWP_000089"
     CDS             complement(21843..22709)
                     /locus_tag="ACFMWP_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC5890760.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(22758..23036)
                     /locus_tag="ACFMWP_000090"
     CDS             complement(22758..23036)
                     /locus_tag="ACFMWP_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC5890761.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(23036..23326)
                     /locus_tag="ACFMWP_000091"
     CDS             complement(23036..23326)
                     /locus_tag="ACFMWP_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HFC5890762.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(23329..23859)
                     /locus_tag="ACFMWP_000092"
     CDS             complement(23329..23859)
                     /locus_tag="ACFMWP_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HFC5890763.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            24167..26692
                     /gene="tspA"
                     /locus_tag="ACFMWP_000093"
     CDS             24167..26692
                     /gene="tspA"
                     /locus_tag="ACFMWP_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HFC5890764.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENITETV
                     AETPDFNATADDLSALLQPSKVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVA
                     ETPDFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLE
                     TPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKY
                     DLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(26864..27280)
                     /gene="gloA"
                     /locus_tag="ACFMWP_000094"
     CDS             complement(26864..27280)
                     /gene="gloA"
                     /locus_tag="ACFMWP_000094"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HFC5890765.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAIEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(27327..28496)
                     /gene="lapB"
                     /locus_tag="ACFMWP_000095"
     CDS             complement(27327..28496)
                     /gene="lapB"
                     /locus_tag="ACFMWP_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HFC5890766.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(28507..28821)
                     /locus_tag="ACFMWP_000096"
     CDS             complement(28507..28821)
                     /locus_tag="ACFMWP_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HFC5890767.1"
                     /translation="MKLIYTFIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIIFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESTK
                     QP"
     gene            29131..30129
                     /gene="ilvE"
                     /locus_tag="ACFMWP_000097"
     CDS             29131..30129
                     /gene="ilvE"
                     /locus_tag="ACFMWP_000097"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HFC5890768.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETEAYLDALVE
                     LVKRAADEIPDAPSALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(30315..31100)
                     /gene="fabI"
                     /locus_tag="ACFMWP_000098"
     CDS             complement(30315..31100)
                     /gene="fabI"
                     /locus_tag="ACFMWP_000098"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HFC5890769.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(31255..32076)
                     /gene="dapD"
                     /locus_tag="ACFMWP_000099"
     CDS             complement(31255..32076)
                     /gene="dapD"
                     /locus_tag="ACFMWP_000099"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HFC5890770.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPTGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(32086..32316)
                     /locus_tag="ACFMWP_000100"
     CDS             complement(32086..32316)
                     /locus_tag="ACFMWP_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890771.1"
                     /translation="MPSERRRRGIKVLPPFCIDSGAEKAIPAARPIPKRQCSATACVL
                     LTNMRLRGTIAHSFQMNILPENTGKRPTKHLT"
     gene            complement(32286..33929)
                     /gene="pgi"
                     /locus_tag="ACFMWP_000101"
     CDS             complement(32286..33929)
                     /gene="pgi"
                     /locus_tag="ACFMWP_000101"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC5890772.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYVDGRDVLPEIRRELNRALEFAHSLDDGSYQGITGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSSVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGTIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            34439..35671
                     /gene="pilG"
                     /locus_tag="ACFMWP_000102"
     CDS             34439..35671
                     /gene="pilG"
                     /locus_tag="ACFMWP_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HFC5890773.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            35745..36605
                     /locus_tag="ACFMWP_000103"
     CDS             35745..36605
                     /locus_tag="ACFMWP_000103"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HFC5890774.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKKHLNLPLTEKESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            36607..37239
                     /gene="coaE"
                     /locus_tag="ACFMWP_000104"
     CDS             36607..37239
                     /gene="coaE"
                     /locus_tag="ACFMWP_000104"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HFC5890775.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFVSLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLCEKTMRLHAFYSGIFASKPTQGKHND"
     gene            37232..37441
                     /locus_tag="ACFMWP_000105"
     CDS             37232..37441
                     /locus_tag="ACFMWP_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HFC5890776.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSSQTESLPEISEPDMAYR"
     gene            complement(37526..39202)
                     /gene="pilB"
                     /locus_tag="ACFMWP_000106"
     CDS             complement(37526..39202)
                     /gene="pilB"
                     /locus_tag="ACFMWP_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HFC5890777.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         9859 a        10375 c         9780 g         9240 t
ORIGIN      
        1 tgggcatagg cgacatactg tacggaacgc gctatgccat agacaaagcc gcaatgcgca
       61 acatcgcccc cttgcccgcc gagggcaaat tcgccgtcat cggcggcttg ggcagcgtgg
      121 cgggctttga aaaaaatacg cgtgaagccg ttgaccggtg gatacaggaa aaccccaatg
      181 ccgccgaaac cgtcgaagcc ctggtcaacg tcctgccgtt tgccaaagtc aaaaacctga
      241 caaaggcggc aaaaccgggg aaggctgcgg ttagcgggga tttttctgct gcatacaata
      301 caagaacaac tagaaaagtt actacagaaa cagaggggtt aaatagaatc agacagaacc
      361 agaaaaatag taatatacat gagaaaaatt atggaagaga taatcctaat catattaatg
      421 ttttatctgg aaattctata caacatatac tgtatggaga tgaagcagga ggtgggcatc
      481 tttttcctgg caaacctggt aagacaacat tcccccaaca ttggtcagcc agtaaaataa
      541 ctcatgaaat tagtgatatc gttacatccc caaaaacgca atggtatgca cagactggaa
      601 caggcggcaa atatattgct aaaggaagac cagccaggtg ggtatcatat gaaacgagag
      661 atggaattcg tatcagaaca gtttatgaac ctgcaacagg aaaagtggta actgcattcc
      721 ccgatagaac ctctaatccc aaatataacc ctgtaaaata atgagtattt gaaagatgaa
      781 aacattagac gaacgaataa aaaatttagg aaaatctctt gaagatagaa ttgacgctaa
      841 tctaattgat gccgcactag agtacattac tttttcagaa cgtttgctag cttttgaaac
      901 gctatgtgat tatatagaag atttcaatat ccagcttacg gaaaaagaat cccaagaaat
      961 ctcttttatt aataaggaat ttggaattga aagtacatca gattaataaa tattaggtcg
     1021 gtttaaaaac ccaacaatca aaaagtcgtc tgaaactgtg tttaatttac agacgacctt
     1081 tccttcattt gaagcaggat attgagaact gagttcttca aaaatcctac acctgctcct
     1141 tccacggcag caccttggtc aaaacggcag acggctacaa agccattgcc catattcaag
     1201 ccggagaccg cgtcctttcc aaggacgagg caagcggaga aacgggatac aaacccgtta
     1261 ccgcccgata cggcaatccc tatcaagaaa ccgtttacat tgaaatttca gacggcatcg
     1321 gcaacagtca aaccctgatt tccaaccgca tccatccgtt ttattcggac ggcaaatgga
     1381 ttaaggcgga agatttaaaa gcgggaagca ggctgtattc cgaaagcggc aaaacccaaa
     1441 cagtccgcaa caccgttgtc aaaccaaaac cgctcaaagc ctacaatctg accgttgccg
     1501 attggcatac ttactttgtc aagggcaatc gggcggaaac ggaaggggtt tgggttcata
     1561 atgagtgtcc gccaagaaaa acaccatcta cccccatata tgggaatgat tcagaagcat
     1621 atgcagcagc aaaggaattg ggatatagaa aaataaaaga aagaacgaga aatgatgctg
     1681 ctatttttaa aaaaggaaag agttatatat cacgcgatgt agattcacat aatggaggtg
     1741 cttggaaaga ggcatcttca cccgaaaaac tgaacagaaa agaaacaaga aacggtacat
     1801 ttgataaaaa cctaaatcgt attggagatt aattattatg tgcgagttca aggattttag
     1861 aagaaacatc ccttgtttta aggagtatga cgaaaattca tttattggca aatggtatga
     1921 tgacggggtg tgggatgatg aagaatattg gaaattggag aatgatttaa ttgaggttag
     1981 aaaaaaatat ccttatccga tggatatacc aagggacatc gtgattggaa tcggtaccat
     2041 tattgatttt ttaatggttc aaaattggaa actttttgaa attaaagctt ctccttggtt
     2101 gcctaaaagt gtcaaaatta atgagcgtta tgaaaggttc agggtaatgc tccgttatat
     2161 ttttactgat ctagatgtag aggactggaa atttttttac tttccaatac aaaatagtaa
     2221 aggtagattg agacgaaaag tttaattata ttggagatac attattatgt gtgagttcaa
     2281 ggatattata agaaacgttc cttattttga ggggtatgac gaaaattcat ttattggcaa
     2341 atggtatgat gacggggtgt gggatgatga agaatattgg aagttggaga atgatttaat
     2401 cgaggttaga aaaaaatatc cttatccgat ggacatacca agatatgttg tcattggaat
     2461 cggtaccatt attgatttct taatggttcc aaattggaaa ctttttgaaa ttaaagcttc
     2521 cccttggcta cctgatagcg tgggaattaa cgaacgttat gaaaggctta aaacaatgct
     2581 ccgttatatt tttaccgaga aagacatagt caacgtgcga tttgattatt acaacaaaaa
     2641 atagcaaaac ccggcaatca aaatgccgtc tgaagcgata tccggctttc agacggcatc
     2701 ggcaacagcc aaaccctgat ttccaaccgc atccactcgt tttattcggg cggcaaatgg
     2761 attaagacgg aagatttgaa agcgggaatc aggctgttat ccgaaagcgg caaaacccaa
     2821 accgtccgca acatcgttgt caaaccaaaa ccgctcaaag cctacaatct gaccgttgcc
     2881 gattggcata cctactttgt caaaggcaat cgggcggaaa cggaaggagt ttgggttcat
     2941 aatgcgtgtc cgcccaaaag aacaggaagc tccaagaatg aaaaacatgg agacgacggt
     3001 cgaagtcaaa tatcagcgga atcaagaatt gctgaattaa aaaataaaat tattcccgga
     3061 atgcccaaaa atgaacgctt aaagattgag caaaaaatca aaaatattac aaaaaatgcc
     3121 aatcgaaaag caaaaggaga agagcatggt cgacgcggtc gttaaaactc ccgaattttt
     3181 accttttact tctgtaggaa tattccgttt tggtgctgat ataacacagt acaaaaacat
     3241 actggaaact tttatgtatg aacctcctga tgagtttgga acagaatatt atgaatctcc
     3301 cgactcaaat ttactcattt ccgtcgaaaa aaacaaaatt atttcgatat tttgttatca
     3361 ggagctatat tttatgggcg ttaatataat aggtctgaat tttgaagatt ttaaacagct
     3421 tttccatcac cctaaatcat acggtgttga taaatattat ttatcaaatg aatcttatcc
     3481 gacatatgtc tatgagtttg atgaaatagg agtacaagct tgggaagcaa aagggaaaat
     3541 tgttactatc attgccgggg gcaaagacaa ttattcgaca gaaccttact acgatgaata
     3601 acattacaga aaagaaacaa gaaacggtac atttgataaa aacctaaatc gtattggaga
     3661 ttaattatta tgtgcgagtt caaggatttt agaagaaaca tcccttgttt tgaagagtat
     3721 gacgaaaatt catttattgg caaatggtat gatgacgggg tgtgggatga tgaagaatat
     3781 tggaaattgg agaatgcttt aatcgaggtt aggagaaaat atccttatcc gatggatata
     3841 ccaagggata tcgtgattgg aatcggtacc attattgagt ttttaatggt tccaaattgg
     3901 aaacttttta caattaaatc ttccccttgg ttgcctaaaa gtgtcaaaat tgatgagcgt
     3961 tatgaaaggt tcagagtaat gctccgttat atttttaccg agatagacat agtcaacgtg
     4021 cgatttgatt attacaacaa aaaatagcaa aacccggcaa tcaaaatgcc gtctgaaacc
     4081 gtgtttgatt tttgacgaca ttttcctcat tggaggggcg gcaattattt atggaaaata
     4141 gatttaaaaa aatcgttaag gatattctta gttttgccca atttgtttcc gaagcggaaa
     4201 ataaaattcc taaccaatcc tctcgttatt acgattgctg gtgggaattg gaaatcttga
     4261 atgcttccgc attggaagat tgggaaatat cgggaaagcc tgaaaaatgg gagaaatgga
     4321 cagaaaaata tcagaccgaa gcgttacagt cagtcaagca tctatttgcc gaagaagttc
     4381 ctgaaaataa tatagtttgc gatatttctc attttttgca ttttgccgat tgggcagaag
     4441 ccgacattcc caatcaatca cgtttatatg ccgaatattg gtgggaaatg gaaatgttca
     4501 aaatgtcggt tttagaagat tgggaacgct cgggaaaacc gttagattgg aaaaaatggc
     4561 aaaggcaata tcgatctgaa gcatttgaat tagttaaaaa attgaaccga agcaaacaag
     4621 agtaacaagc cgcagcctgc ataagggttt ttaaagtacg gcagcaaccg tagattaaat
     4681 taaaaatcaa acaatcaaag ctcgtctgat ataatcgata tattctgtta aacgaaaaat
     4741 aaatatgttt aaaaaattca aaccggtact gttgtcattt tttgcacttg tatttgcctt
     4801 ttggctggga acgggtattg cctatgagat taatccgcgt tggtttttga gcgatacggc
     4861 aactgaagta cctgaaaatc cgaatgcttt tgtggcgaaa cttgcccgcc tgttccgaaa
     4921 tgccgacagg gcggttgtca tcgtgaagga atcgatgagg acggaggaaa gtcttgccga
     4981 aactgtggat gacggtccgt tgcagtcgga gaaggattat ctcgcgctcg ctatccggct
     5041 cagtcgtttg aaagaaaagg cgaaatggtt tcacgtaacg gagcaggaac atggggaaga
     5101 ggtttggctg gattactata tcggcgaggg cggtttggtt gcggtttcgc ttttgcaacg
     5161 ctcgccggaa gcgtttgtta atgccgaata tctgtatcgg aacgatcgtc cgttttctgt
     5221 aaatgtgtac ggcggaacgg ctcacaggga aaattatgaa acgacaggag aatatcgggt
     5281 tgtttggcaa ccggacggtt cggtatttga tgcggcaggg cgcgggaaaa tcggggaaga
     5341 tgtttatgag cattgcctcg ggtgttatca gatggcccag gtatatttgg cgaaataccg
     5401 ggatgtcgcg aatgatgagc agaaggtttg ggacttccgc gaagagagca accggattgc
     5461 atcggactcg cgcgattatg tgttttatca gaatatgcgg gaattgatgc cccgggggat
     5521 gaaggcaaac agtcttgtgg tcggctatga tgcggatggt ctgccgcaga aagtctattg
     5581 gagtttcgac aatggaaaaa aacgctagag tttcgaatat tatttgaaaa acggaaatct
     5641 ttttattgca caatcttcga cggtagcatt gaaagcggat ggcgtaacgg cggatataca
     5701 gacctatcat gcgcaacaga cgtggtattt ggatggcggg cggattatcc gcgaagagaa
     5761 acagggagac agactgcctg attttccttt gaacttggaa aatttggaaa aagaggtgcg
     5821 ccgttatgca gaggctgcgg cgagacgttc gggcggcagg cgcgaccttt ctcactgaac
     5881 gcaaatgccg tctgaaaccg gttttcagac ggcattggag agtcaaacgc tttttgcaat
     5941 gccgtatatg ccgaatccga ttcgctacaa attgaaaaca acaatccaaa aaacggaaat
     6001 acacattaaa cgggtctttt taccgaccgt atcatcccat aggttttcca cacctttttt
     6061 catccataaa ttcaaaccat ttaagtttgt atccttaccg acaattgcag cagcatcatc
     6121 cgcataacgg tcacccaaat tagccaaata acgccaaccg ccataggtat cgccacggaa
     6181 agcataacca cgcaaggttt ggatttgttc tggtgttaaa acaacttcac cctcattcat
     6241 aataagatcc tttaaattat tttttacttg aattgtttac aaaactctgt accaattgct
     6301 ctacttgttg gtgataacct accaactcct gctgtgtgag ctgctgcttt tcccgaataa
     6361 acgggtaata ccgtaccgtg aaaccgttaa tacaggaacc tacgctagtg ctgtaatcgt
     6421 tctctccata cctatgatag ttccgatgag taataatcgc cggattttct ccttttttaa
     6481 tatagtaaaa ttcatgaaaa tatggatttt caggaatatg tcttttatct tcataagcct
     6541 cgtattcagg ataggcagat ggcatttttt taaccccgta agtaagcaat ctttctccca
     6601 tagtcgtgct taaactacac gcatcttttc ggataacaat atcgtccacg ctatccaaac
     6661 cgtcgcgtag aaattggata aagtgcgctt tgttttgctg gttgtatggc tcaagaaccc
     6721 agccttggtc ggtttttttg taatagacgc taatctctat caaattaatg gagtaagcat
     6781 cctgcccggg cgtgtcggaa agccattttg tggcattgtc ttgcgtatac cgtgcaagat
     6841 agccataagg gataaccatt ttgatgccct gaaaatcaaa tgtaaccgta tgttcaaatc
     6901 ctgtcattgg ctcgagattg ttgaaactgg tttgttcatt aacaggttca catgaggtca
     6961 tagtaaaaac actcccaata aacaaaataa aaagttgata aatggtagta gcatatggtc
     7021 tcataatttc aagcttagaa attagttaaa gaatatattc atggtagata ctaactcttt
     7081 aagttgacat attgtgcgat gtcgagggct gtaccgtatt ttcccatcgt attttcccat
     7141 cgtattttcc catcgtattt tcccgttctt tatatgagcg gcaggcatcc tcataaaaga
     7201 agggataccg ataaggaaaa ataccccagc ataaaaaata tactgattaa tcaatacaaa
     7261 tccaacaaac agttcatcgt attcttttct gttggcgtat aaaaatactg atatattcct
     7321 tcactttcat agggcgacgc tttatgtacc gtcctgtgtg ttgaaacgtc ggttttcctt
     7381 accgcctgcc ccgcttttcc ctgattgctg ccaactgccg tccgaacttg aaccgtcagg
     7441 tttcagacgg cattttttct gcctgctccc acaattgccg tttttgtgcg gcggtcagtt
     7501 ttttgacggc gatttcctgc ctgagtgccg tgcctttatc catcccgcct gcaacgatac
     7561 gcatcgccac cggtttgaat acgcgggtat atttcgcgcc tttaccggtt gtgtgggcgg
     7621 caagccgctg ttgcggattc gggctgatgc cgcaatagaa cgcgctgttt tcacacaata
     7681 tcaggtaaac gctccagttt gacgcgttca tctgcctgca tcctgagttt tctccccgtt
     7741 ccaaggcgca actttcagca gcagcagcat acccggtagg gcgagtgcga aacacagttg
     7801 gaaaaacggt acataaccga gccattcaat cagataaccg gcaaaggaat tgatgaccgt
     7861 gcgcgggacg gcggacaggc tggtaaacag cgcaagctgc gttgcggtaa atgcgggatt
     7921 ggtttcacgc gccatatacg atacgaacgc cgccgtcccc aaccccacgc cgaccgcttc
     7981 cgcgccgata actgccgcca gcatcagcct ctcgcctgtg ccgaccgtgt cgaaaggtcc
     8041 gaaccctgcc agccatacaa accccaaaac ggttacagcc tgcaccgcgc caaatagcca
     8101 caaggctttg tttacgccga ttttcagcat ccacacgccg cccaagatac ctgccgccac
     8161 tgccggccac agtcctgcat ttttcgcaat caaaccgatg tctgtcttgc tgaaacccat
     8221 atccagataa aacggcgttg ccaacgcggt tgccatactg tcgccgagtt tgtaaaggaa
     8281 gataaacagc agcacgcaca ccgccgaagc gatgcccttg cgcgtaaaaa attctttaaa
     8341 cggctctacc acggtctgct tcaacgtttt aggaacggca ggcggcaaca cgggttcgcg
     8401 cgcaagaaac agcgtcatca gaaggccggg cagcataaat aatgaagtga taacaaatac
     8461 ttctgaccac ggcatcctgt ctgccaacac caaactcaat gaaccgggaa tcagggcggt
     8521 aacccgatag gcgttcacat gaaccgagtt gcccaaaccc aattcttcgt ccgacaaaat
     8581 ctcgcgcctg aacgcatcca atacaatgtc ctgactggcg gaaaaaaaag cgacaagcac
     8641 cgacaagccg gcaatcagcg gcagatgatt acgggggttt aaaaaggcat aggccgccaa
     8701 agccgccagc aaccctgcct gcgtcagcag catccacccg cgccgccgtc ccaaaacggg
     8761 cagcctgacc gcgtccatca gcggcgacca caaaaatttc caagtaaacg gcagaccgat
     8821 taacgccatc agcccgatgc tcttcaaatc cacctgctcg ctgcgcaacc acgccggaat
     8881 caggttaatc agaaagtaca gcggcagccc cgaggtaaac cccgtaaaaa tacaaacaag
     8941 catatttcgg gaaaagattt gcccgataaa acctgatttc gatacagtca tggttcaaac
     9001 agccaagaaa taaaagccta ttgtagcaaa tatcgcccaa ccgctgaaaa acaccgcccc
     9061 tgctccgccg ttttgccgtt caaatgcaaa atgccgtctg aaactgtgtt cagacggcat
     9121 tgcttttctg aaaacccgac gtgcttacag gctgtaatac atttcaaatt ccagcggatg
     9181 cggtgccatg cggatgcggc ggacatcttc ctctttaaag gcgatatagc tgtcgatcca
     9241 gtctttgctg aacacgccgc cgcgcaggag gaattcgtgg tcggctttga gggcggcgag
     9301 ggcttcttcc aaagaggcgc aaacggtcgg gacgagcgcg tcttcttccg gcggcaggtc
     9361 gtacaggttt ttatcggcag gatcgcccgg atggattttg ttttgaatac cgtccaaacc
     9421 cgccatcaac agggcggcaa atgccaaata cgggttggcg gtcggatcgg ggaaacgcgc
     9481 ttcgatgcgg cgcgccttgc tgctgttcac ggacggaatg cggatggaag cggaacggtt
     9541 tttggcggaa tatgccagtt tggtcggtgc ttcaaagtgc ggcacgaggc gtttgtagga
     9601 gttggtggac ggattggtaa ttgcgttcag ggctttggcg tgtttgatga tgccgccgat
     9661 gtagtagagc gcggtgtcgc tcaagccggc atagccgtcg cctgcgaaca ggttttgacc
     9721 gtctttccaa atggattggt gaacgtgcat accgctgccg ttgtcgccca taatcggttt
     9781 gggcataaag gtggctgttt tgccgaagtt gtgggcaacg ttttgaatca catatttcat
     9841 gtcttgggtt tggtcggcgc gtttgaccaa ggtggcgaaa cgcgtgccga tttccatttg
     9901 gctgccggta ccgacttcac tgtggtggac ttcgacttcg atgccgagtc cttccaaaat
     9961 gtttaccatc gcggaacgca aatcctgacc gcagtcaatc ggcgcgacgg gcgcgtagcc
    10021 gcctttgacg gcgggacggt ggccggtgtt ttgaccgtcc atatgcaggc cgcttgccca
    10081 cgcgccgctt tcggacgtga tttcgtaacg ggttttgtgc atgtcggttt caaattctac
    10141 gccgtcgaag acgaagaatt cgggttcggg gccgaagtat gccgtgtcgc cgatgccgga
    10201 agatttcaaa taggcttcgg cgcggcgggc gatggagcgc gggtcgcggt cgtaaccctg
    10261 accgtcggca gggtcgatga cgtcgcaggt aatgacgacg gtaacatcat cataaaaagg
    10321 atcgacgaag gctgtagacg catcgggacg caactgcata tcggaagcct gaatgccttt
    10381 ccagccgccg atagacgaac cgtcaaacgc ctgaccgttt tcgaaccact cttcggggtc
    10441 ttccaacacg atgcgcgcag gcacggtaaa gtggtgctgc ttgcctttgg tatcggtaaa
    10501 gcgcaaatcg acaaagcggg cttcgctttc ttcaatcaat tttacggcgt ttttaataga
    10561 catttttcag ctcctggaaa agggaaatag caaaatatgc ggaacgcggc agattagctc
    10621 aaagccagca tgattctacc acgtccatgc cgtctgaaac tggccctgcg tcaaattcca
    10681 agctgtaaaa tatagtttca gacggcaata ttgtcaacaa tatgcttcgg tttgcccgtt
    10741 cccaagcaga atgcccgccc ttttatccga atgccgacaa aacagatgcc gtctgaaagc
    10801 agttcagacg gcatctgttg tttggtttga aaacggtcag cgaggatagc cgttgcagac
    10861 aaatttgtac tgagcctctc caagcgtacc gggaataaca taattccatt cggcatagga
    10921 tggtgtataa gaagcgatag agtttcccga tttggaatac cacgttgccg tcaatatcct
    10981 aaaacgttta ccactgcaat ccatttcttc caacgtttta gctgtattaa aaaattttcc
    11041 attgccatac ttttgcggct tggcgaacct tgtttcaaac catgcactgt tgtccgtacg
    11101 gctgtctgca tcaccaaacg tggcagtatt actatctacc aatacccaat ccgccgccac
    11161 cgccggtgtt gccaacccca atgcaaatac tgccaagcac aacatctttt tcatgtccga
    11221 ccctctcgtc cttgtcaaca aaataaagtt aaattgtaaa aaaaaacgac ttttttcaag
    11281 agaaaaatat tccgtcatgc tatctgacaa ccgtttcaga cggcatcgtt tccatctgta
    11341 cgccgccgtt ataaaatagc cttcccgtct tttggaacac gaccatgacc gccctccccc
    11401 gttactccgt ttttggcaac cccgttgcac acagtaaatc gccgcaaatc catcagcaat
    11461 ttgcccttca ggaaggcgtt gacattgaat acgaacgcat ttgcgccgac atcggcggtt
    11521 ttgcacaggc ggtttcgaca ttttttgaaa caggcggttg cggggcaaac gttaccgtac
    11581 cgttcaaaca ggaagcgttt catctggcgg acgagcattc cgaacgcgca ttggcggcag
    11641 gtgcggtcaa tacgctgatt ccgttgaaaa acggcaagct gcgtggcgac aacaccgacg
    11701 gtatcggttt gaccaacgac atcacgcagg tcaaaaatat tgccatcgag ggcaaaacca
    11761 ttttgctttt gggcgcaggc ggcgcggtgc gcggcgtgat tccggttttg aaagaacacc
    11821 gccctgcccg tatcgtcatt gccaaccgta cccgcgccaa agccgaggaa ttggcgcagc
    11881 ttttcggcat tgaagccgtc ccgatggcgg atgtgaacgg cggttttgat atcatcatca
    11941 acggcacgtc cggcggtcta aacggtcaga ttcccgatat tccgcccgat atttttcaaa
    12001 actgcgcgct tgcctacgat atggtgtacg gctgcgcggc aaaaccgttt ttagattttg
    12061 cacgacaatc gggtgcgaaa aaaactgccg acggactggg tatgctagtc ggtcaagcgg
    12121 cggcttccta cgccctctgg cgcggattta cgcccgatat ccgccccgtt atcgaataca
    12181 tgaaagccat gtaatatgtt ccgcatcgtc aaatggctga ttgccctgcc cgtcggcatc
    12241 tttatctttt tcaatgccta tgtgtacggc aacatcatta cctaccgcgc cgtcgcgccc
    12301 catcggactg cctttatgtc gatgcggatg aagcagtttg aacaggaagg tcgcgatgtc
    12361 gcactggatt accgctgggt gccctacaac cgcatctcgg tcaacctgaa aaaagccctg
    12421 attgcttccg aagatgccca ttttgccggg cacggcggct tcgattgggg cggcattcaa
    12481 aacgccatca ggcgcaaccg gaacagcggc aaagtgaagg cgggcggctc gaccatcagc
    12541 cagcagcttg ccaaaaacct gtttttaaac gaaagccgca gctatatccg caaaggcgaa
    12601 gaagcggcga ttaccgcgat gatggaagcc gttaccgaca aagacaggat ttttgaactg
    12661 tatttaaact caatcgaatg gcactacggc gttttcggcg cggaagccgc gtcccggtat
    12721 ttttatcaaa tacccgccgc caagctgacc aaacagcagg cggcgaaact gactgcccgc
    12781 gtccccgccc cgctctacta cgccgaccat ccgaaaagca aacggctccg caacaaaacc
    12841 aatatcgtgc tcagacgcat gggttcggca gagttgcctg aaagcgacac ggactgagtg
    12901 ccgccgcaat ataaaatgcc gtctgaaata tcattcagac ggcatatgct ttctgccttt
    12961 acccttttct ctaaaacgca acggggcggt cattatcgct tttgtccttc tacataacgg
    13021 tcagacacaa aacgtgtccg acacggacaa cttcccaaaa acggcaggca aaaaaaataa
    13081 ccgcttataa gcggtttttt ggtggccaga ggcggaatcg aaccgccgac acacggattt
    13141 tcaatccgtt gctctaccaa ctgagctatc tagcctttgt ctgtctcgtt aagagatgcg
    13201 tattaaacca aattacggga cgacatgcaa gcatatcggg caatattctt tgaaaacagg
    13261 tttaagtcaa tgttttaaat ttgaattaat ttatgtaaaa acaacataaa tccgtatttt
    13321 tgccgcctgc ccgacgatat taggtcgccc gtctgaaaaa tattttcaat atttgaagtt
    13381 cttacccaga taaacagaac gaacctgttc gtttccgacc aaatcatcag gttttcccga
    13441 tgccaacacc gtgccgtctg aaataatgta ggcccgatcg cagatgctga gggtttcgcg
    13501 tacgttgtgg tcggtaatta atacgccgat accgcgcgac ttgagaaatc cgatgatttt
    13561 ttggatgtcg atgacggcga tgggatcgac gccggcaaaa ggctcgtcca acaaaataaa
    13621 atgcggtttc atggcaagta cgcgggcgat ttcgacgcgt cggcgttcgc cgcccgacaa
    13681 agatggggca ggattattgc gcaaacgctc gatattcagg tcggcaagca gtttttcaac
    13741 ttcgccgtcg atgcggcttt tgtctttggt actgatttct aaaatggcgc ggatgttttg
    13801 ttcgacggtc attttacgga aaatagaggc ttcctgcggt aggtagccga cacccaggcg
    13861 ggcgcgttcg tgtatgggca ggtgacgcaa ttcctgcccg tccagcatca cgctgcccgc
    13921 atcggcggca atgagtccaa caatcatgta gaagctggtg gttttacccg caccgttggg
    13981 cccgagcagg ccgacgactt ccccgctttc gatttcaagg gagaagcttt taacgacttg
    14041 gcgttttttg aaactttttt gcaggttttg aacaacaagg cggctgacgt ttgcgctcat
    14101 aaatatctct tcaatatctt cggtcggcaa atgccgtccg aaccaggttt atgtttcaga
    14161 cggcattttg ggattattcg gatttttgcg tactcgaagg ctggataacg acgctgaccc
    14221 tgccggattt ggaagcggat tttgcgccgg attttgtgct gccgctgatg gtatagactt
    14281 cggttttggt gttgtatgta atcaccgcac cttcggcgac atcgccgccg cgctgtactt
    14341 tggcattacc ggttaagact acggtgctgc ctgcagatga ataagcaacg ttgtttgcct
    14401 gtccgcgcac cgtgcctttg ccgccgtcca atgtctggct gaagcggact ggcgaacctt
    14461 ccgccctcac ggattcgccg cctttgccgc cgcgtgtaac attgacgcgg gcggcggaaa
    14521 tattgagcgt accctgtctg atgacgacgt ttccgctgaa tgtggtgctt tggttggctt
    14581 gatcgagcga accttggtcg gcctcaatct gaataggctg cctgctgtcg ctttgaaggg
    14641 caaaagcggg ggacgccgaa aaaaatgcta ttaaaacaaa tagcttacat atcttttgta
    14701 tcataaatcg tggctttcac tttagatgag aagttcaaca tgcctgtttt gtggtcgtaa
    14761 gtcatgccgc ccgcctgacc gtgcgatgca ccatattgga aactgacagg cgtatcggtt
    14821 tgggcatatt gagattcggt atcgacgtgc agcttttcgg cttcaacttt acccgcctgc
    14881 cgtttgccgt cagcggtttt ggtcagcaca acgttgtttt taaaaagaac ctgtttgttt
    14941 tcggtatggt aaacggcttc atcgctgccg acttcgtaca acaacctgcc ttcttggaag
    15001 aacacgagat gcggcgaatc aaaatggatg tcgctgcttt cgggaaactg tttcgcgcct
    15061 ttcgcgctca aatgttcttt taagtatccc tgttcgtcaa accgcctgcc atccaagccg
    15121 tccattgtgt attgcggttc gtcgggattg agcctgactt cttcaatctc gacttcgctg
    15181 atgcgtccca accatgccga cagaccgccc aaggcaaccg ccaatatcaa tgggaacgca
    15241 attccgtacc gccatcttat tttcatttga tgtactcgtt caaagccgcg cccaaagtcc
    15301 cttgcgcctg cataatcagg tcgcacactt cgcgcaccgc gcccgcaccg ccggggcgtt
    15361 tggcaatata ggcggcgtgt tgcagcgtaa accaatgcgc gtcgggaacg gcaaccggca
    15421 atccgcaacg caccatcacc ggcaaatcga ccacgtcgtc gccgacaaag gcacactcgg
    15481 cttcttccac gccgacctga gcgcgcagct cttcatacgc ggcgcgtttg tccgaaatgc
    15541 ctttgaagta gtaatttatg cccaactgtt tgacgcggat gccgacggag ggcgcgtccc
    15601 gacctgtgat aatcgcagtc tgcacgccgc ttgcctgaag cattttcaga ccgtgtccgt
    15661 ccagtgtgtg aaacgatttg atttcttcgc cgttatcgcg gataaagatg cgcccgtcgg
    15721 tcaaaacgcc gtccacatcc aggatcaaca gtttgatttt ggcggcgcgc gcctgtaatt
    15781 cgggagaaat tgcctgcatg ggatttcctt gttttcagac ggcatatctt accacaaatg
    15841 ccgtctgaaa cggctgcaac gccttataca atccgtgccg ccagcaggtc gtgcatattc
    15901 agcgcgccga tcagcacgcc atctgcatcg gtaaccagaa gcccgttcac atggtttgcc
    15961 tgcatgactt tcagggcttc ggtggcgaga cgttcggcgg agatggtttt aggatgcgta
    16021 tgcatgactt cgtctatcga aagaccggta aaattgtcgc attcttgaaa caggcggcgc
    16081 aaatcgccgt cggtgaatac gcctttcaga cggccttgcc cgtccgttac cgccaacatg
    16141 cccagccctt tttcactcat gctgacgatg gcttctttca agggcgtgcc gagtcggacg
    16201 gcaggcaggc cgccgccttt gtgcataatg tcggcaacgc gcaaaagtag gcgtttgccg
    16261 aggctgccgg caggatggct caaggcgaaa tcgtcgggcg tgaacgcgcg tgcgcgcagc
    16321 aggacgaccg ccaacgcatc gcccaaagcc atgacggcgg tggtgctggt ggtcggggca
    16381 agccccagcg ggcaggcttc tttggaaacc gacgccgtga tgtggatgtc ggcatggcgc
    16441 gccatggttg aatcggggcg ggcggtgatg cagacaagcg tgatgtcttt gcgtttgagc
    16501 gcggggatga tggcggcgat ttcgtcgctt tcgccggaat tggaaatcgc gacgaccacg
    16561 tcgttgtcca caatcatgcc caaatcgccg tgtgccgctt ccgcagggtg gacaaaaaac
    16621 gcgggcgtgc cggtcgaggc catcgttgcc gccattttgc gcccgatatg tcccgacttg
    16681 cccatgcccg tgataacgac cctgcccttg cagtgcaaca acgcgtctgc cgcaaggacg
    16741 aagttttcgt ccaattccgt tgcaatttcg cgcaagcctt cctcttcggt gtgcaacact
    16801 tcgcgcgccc agtcgagata ttttccgttt tctgccattg ccatccgcct ttgctgtaat
    16861 aaaactaccc aaaatttccg aatcggggta gcataagcct ttgaaacata cacatccatc
    16921 caaaggaatc agaaatgact attttatcgg acgttaaagc attaggacaa caaatctggc
    16981 tggacaacct ttcccgctcg ctcgtgcaaa gcggcgaatt ggcgcaaatg ttgaaacaag
    17041 gcgtgtgcgg cgtaacttcc aatcccgcca ttttccaaaa agccttcgcc ggcgatgccc
    17101 tgtacgccga tgaagtcgcc gcgctcaaac agcaagatct gaccccgaaa caacgctacg
    17161 aaaccatggc ggttgccgat gtgcaagccg cctgtgacgt gtgccttgcc gaacacgaat
    17221 ccaccggcgg caaaaccggt ttcgtcagcc tcgaagtttc gcccgaattg tccaaagacg
    17281 cgcaaggcac ggtagaagaa gcgcgccgcc tctacgccgc catcgggtgc aaaaacgcga
    17341 tgattaaagt gcctgccacc gacgcaggca tcgatgcgct cgaaaccctc gtttcagacg
    17401 gcatcagcgt aaacctgacc ctgctgttct cacgcgccca aaccctcaaa gcctacgccg
    17461 cctacgcgcg cggcattgcc aaacgcttgg cagccggaca aagcgttgcc catatccacg
    17521 tcgtcgccag cttcttcatc tcccgtgtgg acggcgcgct ggacacaaca ctgcccgacc
    17581 acctcaaagg caaaatcgcc atcgcccttg ccaaagccgc ctaccaagac tgggcacaat
    17641 acttcggcag cccggaattt gccgcactgg aaacccaagg cgcaaaccgc gtgcagcttt
    17701 tatgggcatc taccggcgtg aaaaacccgg cctatcccga cacactctac gttgacagcc
    17761 tgatcggcgc gcacaccgtc aacaccgttc ccgatgccac gctcaaagcc ttcatcgacc
    17821 acggcacagc caaagctacg ctgaccgaag gcgcggacga agcacaagct cagctcgccg
    17881 aaaccgccgc gctcggcatc gatgtcgaaa ccttggcggc acgtttgcag gaagacggtt
    17941 tgaaacagtt tgaagaagcg tttgaaaaac tgctcgcacc gttggtttaa acttttcatc
    18001 cccgatgccg tctgaaaggc tttcagacgg catcgcccgt ttgaccggac acagtgcggc
    18061 atatcaagga ttcaccctaa aaatattaat gggcaagaag ttaatgcacg acattaccca
    18121 ccaacacaaa aggaaataga atcatggcaa aagcactcga aatcatttca cccaatgaaa
    18181 tttattcaga tctgattttt aaggatccgg tacctcccca tacaatatat acagaattga
    18241 tgaaactggt tagtagaaat gcaagtaatg agagaatcgc agatagagcc ttcgattttt
    18301 tctcgtccgg ccttatggat ggttcagcta ccgaagagca atataatgcc ctatatgatt
    18361 taaccttact tgaagaaccc gggatggaac tgaataaaga tgagataatg gctttgatta
    18421 atagtcttaa ataaaggggc cgtaccggat atgtacacag gacgtttcgc ccccagcccg
    18481 accgggctgc tccacatcgg ctcgctgctg accgccgccg cttcctatgc cgatgcacgc
    18541 tcaaacggcg gcaaatggct ggtccgcatg gaagacctcg atccgccgcg cgaaatgccg
    18601 ggggcggcaa gccatatcct gcacacgctt gaggcattcg gattcgagtg ggacggagaa
    18661 gtcgcctatc agagccgccg ttacgccctg tatgaagaaa cactatgccg tctgcaaacc
    18721 gccggactgg tctatccctg ccattgcagc cgcaaagact ggcaggctgc ggcagtccac
    18781 ggcgcagacg gattcgtcta taacggacgt tgccgcaatc cgcagcaacg ccctgcactg
    18841 caaggcaaac agcctgcgtg gcgcatccgc gtccccgacc gcgacatcgg cttttcagac
    18901 ggcatcgtcg gcggttacgc ccaaaacctc gcccgcgaca tcggcgattt cgtcctgctt
    18961 cgtgcagacg gttactgggc ataccagctc gccgtcgttg ccgacgatgc cgaacagggc
    19021 gttacccaca tcgtccgcgg acaagacctg ctcgtttcca cgccgcgcca aatctatttg
    19081 cagcagtgtt tgggcgttcc gacaccgcaa tatgcccacc tgccgctgct gaccaacgca
    19141 caagggcaga agtggtcgaa acagacgctc gcccccgcat tggatttaaa ccgccgcgaa
    19201 caactcctcc gccaagtgtt ccgttacctc aagctgcccg aagcaccgga aaccgaccgc
    19261 cctgccgaac tgctcgactg ggcggtggca cactgggata tgggcaaagt gccgaaacac
    19321 gccattacca ccccctaaac accgcccgac aaacgcacaa atgccgtctg aagccttcag
    19381 acggcatttc acacatacag ccccgcccta ttcgcgcgta tttgcccgct caacctcttt
    19441 ccacgcttcg agaatcaggc tgccgtcgtt gtctttcaag agcgttgcgt cggaaagcat
    19501 acgccgccaa gtccgcgcac ctttcaaacc gtgcatcagc ccgaggctgt ggcggacgat
    19561 gtggcgcaag attgtgccgc gtccggcttg gatctgggct tggctgtatg tgtagaggca
    19621 ctgcaccaaa tcggcgtatt cgatcgggct gcgagtatcg ccgtaaaaca atctgtccca
    19681 ttcgcgcatc accatcgggt tgtggtacgc ctcgcgcccg accatcacgc cgtcaacgtg
    19741 ttgcaggtgt ccggcgattg cttcgttggt ggtgatgccg ccgttgatga tgatttccag
    19801 cccgggaaac tcctgcttga ggcggtaaac gtaatcgtat ttcaacgggg gaacgtcgcg
    19861 gttttctttg ggggaaagac cgtccagcca agcgttgcgg gcgtggacga tgaaggtttt
    19921 gcaggcggtt ttgtcgcgca gcgtgccgac gaaatcggca acggtttggt attcggtctg
    19981 cctgtccaca ccgatacggt gtttgacggt aacgggaata ccgaccgcgt cctgcatggc
    20041 gttgaggcag tcggcaacca gcccgacttc gttcatcaga cacgcgccga acgagccttt
    20101 ctgcacgcgc ggactggggc agccgcagtt gaggttgacc tcgttgtaac cgtatgcctc
    20161 ggcggctttg gcggctttcg ccaaatcgga cggatcgctg ccgcccagtt gcagggcgac
    20221 gggctgctcg ccttcgttga acatcaaaaa gcggtctttg tcgccgtaaa caatcgcgcc
    20281 ggcgttgacc atttcgctgt acagccaagt attgcgggta atctggcgcg ccatataacg
    20341 gtagtgcctg tccgtccagt ccaacatcgg ggcgacggac aggtggcgcg ggggaagggt
    20401 gtgtgtattg tcgttcattg tcgatatttt atcattgcgg attcaatttc aatccggaac
    20461 aaccttcatt tttggggaaa tccgcgtcat gaaagagtcc agcagtatgg ttaccggccc
    20521 gtcgttgcag agcgacacct gcatatgcgt gcggaaacgc cctgtttcga catgaatccc
    20581 gtgtccgcgc aacagttccg ccgttcgcag gtaaagctgc tgcgcctgtt ctgcaggtgc
    20641 ggcttgggaa aacgaaggcc gccgcccgct tgccgcatcg gcataaagtg taaactgcga
    20701 caccagcagc accgcgccgc cgacatcttt caaagacagg ttcaacttgc ccgcttcgtc
    20761 ttcaaacacg cgcaaatggg cgattttgtc ggcgatatag cgtgcatctt tttctgtgtc
    20821 gctatgcgtt acaccgagta gcacgacgaa tccgccgtcg attttgccgc aggtttccgt
    20881 gccggcttcg gacacgacat ccacctttgc acctaccgtt ttctgtatga ccgcacgcat
    20941 aagccgtcct ccttacctga acgtgcaatg ccgtctgaaa aggcttcaga cggcatcggt
    21001 atcggaaatg ccattacggt ttgacaccgt tttcttccaa aagggcatcg attttcaagc
    21061 gggctttttc ctgtctcaaa ccctgctcca attggtttct gaccaactcg aaaggttgcg
    21121 cgtcggggtt tttcccgacc acgctgagtt tgaacagata atagcgttcg cccaatttga
    21181 ccggattgcg ggtaacgtcg ccccgattca tcgctgcaaa ctgcgaagcc agcggctcgg
    21241 gaagctgctg cgccataatg aaaccgtcaa aagcctgctc gtcgttcgga taacgcttca
    21301 tcagcccttc aaaagacagc cctttgagca ggagctgctg cgcctgacgc gcctcctctt
    21361 cggttgcgaa gctgacctgc tgcaatttga tcatgcggat ttgccgctca taaaactgac
    21421 gcagtgcgct ttcggaaacc gtttccgaac gttccagaaa acggacgtac tcctcggcat
    21481 aaaaagacgc ttcggcgatt ttaaagcggt tttggacatc cttatcctta tccaaacctt
    21541 ccttcaatgc cctgtttttc aaaacttcca aagtttgcag ccggcggacg gcatcgtttc
    21601 ggattgcctg cccgtccggt ttttgggact gctccgcatg ccggtctgcc tgctgcatga
    21661 tctgcgccac cagcgtatcc accaaagccg ggtcgatttc gggtgctttg gctgccgcaa
    21721 aacctgccaa cattgcagca ataactgcgg cagcggtttt tttctgtttc atggtattcc
    21781 ctgtcctgcg cggcggcaaa acgcctgtct gaacgtcttg ccgccatatc ccgttttcag
    21841 aattattttg caggtttgat gtttgccttg cccaacagtg caccgacggc acggtcaatc
    21901 cgttccgcct gaaggttgcc cgcaatctgt cctttcattt catcaaaaga aggcactttt
    21961 acctcgcggc tgtcgttgac ataataaacg ccgtagaaat cgccgttttt cagcggcgtt
    22021 gccgtaaatt cgcctttttt caagtcctta attgcctgat aaagcggcgg aacaccctgt
    22081 tccaaatctt tcagcggcac atatccgacc ggcgcaccgg tctgtttggt acggtcgttg
    22141 agggaatatt gtttcaagac ggcatcgaaa ccttttttcg ccttcaagtc ggcaaccgct
    22201 ttttttgcat tttcttcctt gtcggtcagg atttcgccca actggacttc ctgcgtacct
    22261 ttgtaaaaac cgctgatatt gtcatatgcg gcttttactt cctgctcgga aaccggttgg
    22321 gttttggcga tatgcaatgc gtatgcctcg ccgttcaagc catattttac cgcctgccaa
    22381 acggttttga aggacggttt cttgtcgtcg cccgactttt tcgcttcggc acgcaatttg
    22441 gcaagcgcat ttttaaactc tgccgaccgg tcgagtttca ggcgtttcac ttcctgtgcg
    22501 accacggtgt tgaccacttc gttttccagc agggattggc gcagttgcgg cgtgtcttcg
    22561 gcacggctgt tttccgcacg gaatgcggca acctgcgcat caatgacgga actgtcgatt
    22621 ttctgaccgt tgacggttgc cagcgtttgg gcaaacaggc tgccggaaca ggcaagcagt
    22681 gcaacggaag tcaggatttt tgctttcata atcttctctc tttaaatttt aaattgaaat
    22741 gttcgggcag acttcattca gtccgccgta tggaaatact cgtcaggggt agccgcccgg
    22801 atgccgagcg cgtgaatcat gccgcctgaa aacaaatctt tgagcagcga tttgaccgtt
    22861 ttctggcggt tcaggcggct tacgccttca aaacggccgc tgacgaccaa aacggcataa
    22921 tgtccgccgc cggtattgcc cgcgtgtcct ttgtgcagat ggctctcatc gccgatttcc
    22981 aacaccagcg gatcgagcgt ctgcaggcgt tcgcggatca aatcgacggc cggcattatt
    23041 tgaacaccgc tttaaacggc ttgatcagca cttcgctgta cacgcctgca tgaacatagg
    23101 gatcgtcttc cgcccacgcc tctgccgcat ccaaagactc gaactgcgcc acaatcaaac
    23161 tgcccgaaac gcggttggag tcctccggca aaggattcgg gcctgccgtc aacagccggc
    23221 cttccgactt cagcgtctcc agccgtttga ggtgttcggg acgtgccgcc atacgcgctt
    23281 catacacatt ctccccgtct gttgccagca acataaaata ttccacagtc aatcctcctt
    23341 tttcagacag gtactcagat aaataccctg aataataaag aaaacaagca tcagtgcagt
    23401 cgagccgaac attttatagt tgacccattg cgactcgaac cgggtaaaca caaaccagtt
    23461 ggcgataccc ataaaaatca ggaaaccgac ccacatatac gtcaatttcg cccatacggc
    23521 atccggaagc tgaatctccc tgccgatact cgccttcaag ccgtttttac cggcgaggtg
    23581 gctgccccac aggaacagcg cacccagcca aaacaaaacg ctcggcttcc acataatgaa
    23641 gcggctgtcg cccaaaacaa tggttgcgcc gccgaatacg acaatcagca ccagtccgac
    23701 ccactgcatc gtatccagct ttttatattt ccaatacaga aaagccgcct gaaccacacc
    23761 ggcaaccaag gcaaccgccg tagcggcaat catatttttg gtaacggtat aagtagcaaa
    23821 aaacaagatg acagacaaaa ggtcgctgac gaatttcata tccaaatgag aaagcaaatc
    23881 aaataaacgc taatcataca ggcagaaccc tgtttttgca cctgcaaaac caacaaattt
    23941 tgttttgatt gatgcaaata tgcacagatg tttttgaaaa aagatggaga tatgtcataa
    24001 tttgtaaaaa cggcgaatga ttgccgttta aaatgtggcg gcggtcggta cattcacata
    24061 ttaaatgccc gccggccgac tgccccgccg atgcccgatg atgacgaaat ttacagactg
    24121 tacgcggtca aaccgtattc agccgccaac ccacagggga tacatcttga aaaacaacag
    24181 acaaatcaaa ctgattgccg cctccgtcgc agttgccgca tcctttcagg cacatgctgg
    24241 actgggcgga ctgaatatcc agtccaacct tgacgaaccc ttttccggca gcattaccgt
    24301 aaccggcgaa gaagccaaag ccctgctagg cggcggcagc gttaccgttt ccgaaaaagg
    24361 cctgaccgcc aaagtccaca agttgggcga caaagccgtc attgccgttt cttccgaaca
    24421 ggcagtccgc gatcccgtcc tggtattccg catcggcgca ggcgcacagg tacgcgaata
    24481 caccgccatc ctcgatcctg tcggctactc gcccaaaacc aaatctgcac tttcagacgg
    24541 caagacacac cgcaaaaccg ctccgacagc agagtcccaa gaaaatcaaa acgccaaagc
    24601 cctccgcaaa accgataaaa aagacagcgc gaacgcagcc gtcaaaccgg cgtacaacgg
    24661 caaaacccat accgtccgca aaggcgaaac ggtcaaacag attgccgccg ccatccgtcc
    24721 gaaacacctg acgctcgaac aggttgccga tgcgctgctg aaggcaaacc caaatgtttc
    24781 cgcacacggc agactgcgtg cgggcagcgt gcttcacatt ccgaatctga acaggatcaa
    24841 agcggaacaa cccaaaccgc aaacggcgaa acccaaagcc gaaaccgcat ccatgccgtc
    24901 cgaaccgtcc aaacaggcaa cggtagagaa accggttgaa aaacctgaag caaaagttgc
    24961 cgcgcccgaa gcaaaagcgg aaaaaccggc cgttcgaccc gaacctgtac ccgctgcaaa
    25021 tactgccgca tcggaaaccg ctgccgaatc cgccccccaa gaagccgccg cttctgccat
    25081 cgacacgccg accgacgaaa ccggtaacgc cgtttccgaa cctgtcgaac aggtttctgc
    25141 cgaagaagaa accgaaagcg gactgtttga cggtctgttc ggcggttcgt acaccttgct
    25201 gcttgccggc ggaggcgcgg cattaatcgc cctgctgctg cttttgcgcc ttgcccaatc
    25261 caaacgcgcg cgccgtaccg aagaatccgt ccctgaggaa gagcctgacc ttgacgacgc
    25321 ggcagacgac ggcatagaaa tcacctttgc cgaagtcgaa actccggcaa cgcccgaacc
    25381 cgctccgaaa aacgatgtaa acgacacact tgccttagat ggggaatctg aagaagagtt
    25441 atcggcaaaa caaacgttcg atgtcgaaac cgatacgcct tccaaccgca tcgacttgga
    25501 tttcgacagc ctggcagccg cgcaaaacgg cattttatcc ggcgcactta cgcaggatga
    25561 agaaacccaa aaacgcgcgg atgccgattg gaacgccatc gaatccacag acagcgtgta
    25621 cgagcccgag accttcaacc cgtacaaccc tgtcgaaatc gtcatcgaca cgcccgaacc
    25681 ggaatctgtc gcccaaactg ccgaaaacaa accggaaacc gtcgataccg atttctccga
    25741 caacctgccc tcaaacaacc atatcggcac agaagaaaca gcttccgcaa aacctgcctc
    25801 accctccgga ctggcaggct tcctgaaggc ttcctcgccc gaaaccatct tggaaaaaac
    25861 agttgccgaa gtccaaacac cggaagagtt gcacgatttc ctgaaagtgt acgaaaccga
    25921 tgccgtcgcg gaaactgcgc ctgaaacgcc cgatttcaac gccgccgcag acgatttgtc
    25981 cgcattgctt caacctgccg aagcaccgtc cgttgaggaa aatataacgg aaaccgttgc
    26041 cgaaacaccc gacttcaacg ccaccgcaga cgatttgtcc gcattacttc aaccttctaa
    26101 agtacctgcc gttgaggaaa atgcagcgga aaccgttgcc gatgatttgt ccgcactgtt
    26161 gcaacctgct gaagcaccgg ccgttgagga aaatgtaacg gaaaccgttg ccgaaacacc
    26221 cgatttcaac gccaccgcag acgatttgtc cgcattactt caaccttctg aagtacctgc
    26281 cgttgaggaa aatgcagcgg aaaccgttgc cgatgatttg tccgcactgt tgcaacctgc
    26341 tgaagcaccg gccgttgagg aaaatgcagc ggaaatcact ttggaaacgc ctgattccaa
    26401 cacctctgag gcagacgctt tgcccgactt cctgaaagac ggcgaggagg aaacggtaga
    26461 ttggagcatc tacctctcgg aagaaaatat cccaaataat gcagatacca gtttcccttc
    26521 ggaatctgta ggttctgacg cgccttccga agcgaaatac gaccttgccg aaatgtatct
    26581 cgaaatcggc gaccgcgatg ccgctgccga gacagtgcag aaattgctgg aagaagcgga
    26641 aggcgacgta ctcaaacgtg cccaagcatt ggcgcaggaa ttgggtattt gattcccaac
    26701 tgccctttcg cagatcaagg atgccgtttc agacggcatc ttttttgcct tatcggtgta
    26761 acggataaag tttgaaccgg cacaggctca aacagcaggc cgacggcaac aaaatgccgt
    26821 ctgaaacccc taaaggcttc agacggcatt ggcggcggcg gtatcaggca gtttgatagg
    26881 caaccgaatc gtcaccgctt ttcttttgaa tgaactcgat tttgtatccg tcggggtctt
    26941 cgacgaaggc tatcacggtt gtgccgtgtt tcatcgggcc ggcttcgcgg acgacgtttc
    27001 cgccctgccg cttcacacgt tcgcaggctt cgtaggcatc gtccacttca atcgcgatgt
    27061 gtccgtaagc gttgcccaag tcgtatcgtt ccgtatccca gttgtgcgtc agttccaaaa
    27121 ccgtgctgtc ggtttcatcg ccgtaaccga cgaaggcaag ggtaaatctg ccttcgggat
    27181 agtcttttcg gcggagcagt ttcatgccca aaacgttttg gtagaaatca agggattttt
    27241 cgagattgcc cacgcggagc atagtatgga gtaagcgcat ttttcgtgtt cctcattggt
    27301 ggtggttaac ttcgatttag tggtggttaa acttcaattt tattcggggt aaacgtctgc
    27361 catttgttgc aggcgggaca gtgccagaaa aagacttggg atttgaagtg gcagttgcgg
    27421 caacggtaca tcacgctgcg ctgtagctgc cgtccgataa ccgaacgcat catgtcggca
    27481 tcggctttcc aagccggatt catatcgctg agtttcaaac cgagcaggcg gtacacgccg
    27541 ttaaggtcgg gcttgcggcg gacaagctcg acggcggttt gcgcggcttc tttctcgccc
    27601 ttaagcagca gggatttctc gtacacgaca ttgatcaggt caagttcggg aaacgtctgc
    27661 atatatcctg tcagacggtt caagccttct tcaggttttc cctgcgcggc ataggcttcg
    27721 taaagcttct cgccgaccat gctcaagtat gcatggtttt gctgctcgat ggcggcatag
    27781 gcttcgacgg cggcagggaa attgccttgt cggtgttcga tgtcgcccaa aatcatgttg
    27841 gcgcgggtgc attttttgtt ggcttcgagt gccttgccga cattgaaacg cgcgacatcg
    27901 aaattggact tgaacagcgc ggcttgggca agttcgcaat aaaactgggc aatttcaaac
    27961 tgataggtct gatcgtcatg gctgagcagc cgggcggttt caaccgcttt ttcccaatcc
    28021 ctgtcctgtt ggtagatatt gagcaggtgc tgtctggctt cacgcgccat ttcaccgtct
    28081 tgcagcccca aaaaaatctg ttcggcacga tcgaccaaac ccgcgctttg gtagttttgc
    28141 gccaattcaa acaggacgcg cgcgcgcttt tcgccgaccg tatcgggaga atcgagcatt
    28201 gtccggtgta tgttgatggc tttgtcgttt tcgccgcgct ggcggtaaag tttgccgagg
    28261 gtgaggttca aatcatacga ttgcggccgg ccgtcgacga cttccgccaa ctcccttgcc
    28321 gcgcgcccgc tgttgcggtc gaccaaagcg tccaagcttt tataaaatcc cgaagggatg
    28381 ctttttgcct gcttcaatac ggttttcata tccacgcggg cggcaaacca gcccatcgcg
    28441 aagaagacgg gcaaaaggat aatcggcagc aggataatcc acaattcgtt gtccatatcg
    28501 gctttcttaa ggctgtttgg tagattcggg cgcattttgc gccggtggtg cggtcagctc
    28561 cttccccgtc aaacgcgcat ttttctttac ttcggcacgc aacctgccgt tctcgccacg
    28621 taacgacaac aaccgtccga acaaggcaaa cattccaaaa ataataccga ctacaaatgc
    28681 gccgaacaat acgacaatca gcggcaaatc gaatttttgc cccggcaggt aggaaaaggt
    28741 aacggcatcc gtattaataa cggcaagcag caggaagagc agcaggataa tgattttgat
    28801 gaaggtatag ataagtttca tgtttgctcc gtaaataaaa acgccgcccg gacagcttcg
    28861 cactctgaac caagattgcg ctagtttaaa cgatttgcac ggtttcggat aggatgcggc
    28921 agcgtgttca gacggcatac ggagtatgcg attgccgaca attttaccaa atacatcgtt
    28981 cctttccatt tgaaaaataa cggattggac accgcatcga cagaaaaacc cgccgcgcac
    29041 ttgtcaaaac cctgtttgca ggcgtatctt tacaatcttc aaattcaaac cgttcattga
    29101 aacatatcag aataagaaag gctttacatc atgagcagac ccgtacccgc cgtattcggc
    29161 agcgtttttc acagtcaaat gcccgtcctc gcctaccgcg aaggcaaatg gcagccgacc
    29221 gaatggcaat cttcccaaga cctctccctc gcaccgggcg cgcacgccct gcactacggc
    29281 agcgaatgtt tcgagggact gaaagccttc cgtcaggcag acggcaaaat cgtactgttc
    29341 cgcccgaccg ccaacatcgc gcgtatgcgg caaagtgcgg acattttgca cctgccccgc
    29401 cccgaaaccg aagcttatct cgatgctttg gtcgaactgg tcaaacgtgc cgccgacgaa
    29461 attcccgatg caccttccgc gctgtacctg cgcccgacct taatcggtac cgatcccgtc
    29521 atcggcaagg ccggttctcc ttccgaaacc gctctgcttt atatcctcgc ctcccccgtc
    29581 ggcgactatt tcaaagtcgg ctcgcccgtc aaaattttgg tggaaaccga acacatccgc
    29641 tgcgccccgc atatgggacg cgtcaaatgc ggcggcaact acgcttccgc catgcactgg
    29701 gtgctgaagg cgaaagccga atacggcgca aatcaagtcc tcttctgccc gaacggcgac
    29761 gtgcaggaaa ccggcgcgtc caactttatc ctgattaacg gcgatgaaat cattaccaaa
    29821 ccgctgaccg acgagttttt gcacggcgta acccgcgatt ccgtactgac ggttgccaaa
    29881 gatttgggct ataccgtcag cgaacgtaat ttcacggttg acgagctcaa agctgcggta
    29941 gaaaacggtg cagaagcgat tctgaccggt acggcagccg tcatctcgcc cgttacttcc
    30001 ttcgtcatcg gcggcaaaga aatcgaagtg aagagccaag aacgcggcta tgccatccgt
    30061 aaggcgatta ccgacatcca gtatggtttg gcggaagaca aatacggctg gctggttgaa
    30121 gtgtgctgat gctttaaata aaaaaaatgc cgtctgaaac ccgtttggcg tttcagacgg
    30181 cattttcgcg ttcggaccat ttccgctgca cctgcagcaa gtcgggcatt tccctagaaa
    30241 tacgcttcag acggcaaacc gccgcccgaa accgatacgc ggtacggacg gcgcacggat
    30301 ttgaaaacgg cggattatcc ctcggtgctc aaggcattaa tgctgtaacc gccgtcaacg
    30361 taagtgattt cgccggtaat gccggacgac aggtcggaca gcaggaaggc ggcggtattg
    30421 ccgacttctt cgatggtaac gttgcggcgg agcggattgt gggcggcgac gtgtcccaag
    30481 agtttgccga aatcggcgat gccggaggcg gcaagcgttt tgatcgggcc tgcggaaatg
    30541 ccgttgcagc ggatgccttc tttgcccaga caggcggcgg taaaacggat gcccgcctca
    30601 aggctggctt ttgccatacc catcacgttg taattcggaa tcgcgcgcac cgcgcccaag
    30661 tagctcaggg caacgatggc ggagtttctg ccgcgcatca tcggacgggc ggcttttgcc
    30721 aatgcgggca ggctgtatgc ggaaatttcg tgtgcggtgt tgaacgcttc gcggctgatg
    30781 ctgtcgagga agtcgccgct caaggcttct ttcggcgcaa aaccgatgga atgcaccaaa
    30841 ccgtccaagc cgtcccaatg tttgcccaaa tcggcgaaca cttggttgat ttcgtcgtcg
    30901 ctggcgacat cgcagcggaa cacgagttcg gaatccaatt ccgccgccat tttgcggacg
    30961 cgctcttcca gtttgtccac aacgtaggta aacgccagtt ccgcgccttg ttcgcggcag
    31021 gctttggcga tgccgtaagc gatggaacgc tcggaaatca tgccggtaat cagaattttt
    31081 ttgccttgca gaaaacccat tttgtatcct tcaaatagtg ttcggttcgt tctaaaccgt
    31141 tgattatagc aaattgtccc tgtttctgtg ttttcacgtt gcagcatgca aacggcaatg
    31201 ccgtccgaag cggatttcag acggcatcgg acgtttcaaa tacggtttaa ggcatcagat
    31261 gccgcgcaac aattcgttca cgctggtttt cgcacgggtt tgcgcgtcca cgcgtttgac
    31321 gatgacggcg cagtaaaggc tgtggctgcc gtctttggaa ggcatactgc cggacacgac
    31381 gaccgaacct gtcggtacgc ggccttggta gatttcgccg gtggtgcggt cgaagatttt
    31441 ggtggattga ccgatgaaca cgcccatcga aatcacgctg ccttcttcga caatcacgcc
    31501 ctcaacgatt tcagaacgcg caccgatgaa gcagttgtct tcaatgatgg tgggggcggc
    31561 ctgcaggggt tcgagtacgc cgccgatacc gacgccgcca ctcaagtgca cgtttttacc
    31621 gatttgcgcg caagagccga cagtcgccca agtatcaacc atcgcgcctt cgtcgacgta
    31681 tgcgccgatg ttgacgtaag acggcatcag cacgacattt ttcgccacaa agctgccgcg
    31741 tcgggcaacc gcacccggaa cggcgcggaa gcctgcgttt ttgaactcgt cttcagacca
    31801 gtcggcaaac ttggtcggca ctttgtcgaa gtatttgttc acgccgtcgt tgaggacttc
    31861 gttgtcttgg atgcggaagg acagcaacac ggcttttttc gcccattcgt tgactttcca
    31921 ctcacccacg cccaagcgtt cggcaacgcg cagtttgccg gaatcgagtt ggcggatggt
    31981 ttccaacacg gcttctttga cttcgggagt aacggtggtc ggggtgatgt ccgcgcggtt
    32041 ttcaaaggcg gtttcgatga tgttttgcaa agacataatg tttccttatg tgagatgttt
    32101 cgtgggacgc ttgccggtat tttcgggcag tatgttcatt tgaaatgaat gcgctattgt
    32161 gccacgcaaa cgcatattcg tcagcaatac gcaggcggtt gccgaacatt ggcgtttcgg
    32221 aatcgggcgg gcggcaggta ttgccttttc cgcgcccgaa tcaatacaga aaggcggcag
    32281 tacttttatg ccgcgccgcc gcctttcaga cggcattcgc ggtaaaacgc catcagccct
    32341 tcggtcgagg catcgtgtac ggacgtgccg ccttccagtt cgccgatgat ggtttttgcc
    32401 aactgtttgc cgtattccac cccccactga tcgaaggggt tgacgttcca tatcgtgcct
    32461 tggacgaagg ttttgtgttc gtaagccgcc atcagcatac ccagattgta gggcgtgagg
    32521 cggtcgagca ggatgctgtt actggggcgg ttgccgggga actctttgtg cggcgcgagg
    32581 cgttcgcgtt ccgcttcggg caaatctgcc aattcggcgc gtgcttcgtc caaggttttg
    32641 cccttcatca gggcttccgc ttgggcaaag gcgttggcaa cggtaaaacg gctgcgtccg
    32701 tcctccacgc cctgcgccgt catcgggacg ataaagtcgc agggaatcag gcgcgtgcct
    32761 tgatgaagca gttggaaata ggcgtgctgg cagttgaccc cttcaccgcc gaacacgatg
    32821 ccgcccgttt tgcacacggc gggactgccg tctgaagcgc ggcttttgcc caaactctcc
    32881 atatcgagct ggttcagcca caccggcagc aggcgcaggt tgtggctgta cggaacggcg
    32941 gtctgcccgt ccgcgtgttg gaaattgtta taccacacgg caatcagtgc catcagaacg
    33001 ggaatgttgc ggcgcggcgg cgtgtggaaa aaatggctgt ccatcgcgtg cgcccccgcc
    33061 aacaactcgc ggaaacgcgc cccgccgacc gcaaccatca cgggcaaacc gacggacgac
    33121 cagacggaat agcgtccgcc cacccagtcg tacatcgcaa acacgcgttc cgccgcgata
    33181 ccgaaagccg cagctgccgc agtgtcggca gacaccgcgc aaaaatggca cgccgtttcg
    33241 gattccgaga accccgcacc gcgataccac gccttgactg cctgtgcatt gagcagggtt
    33301 tccggtgttt tgaaggactt gctggcaacg caaaacactg tcgtttcggg gttcagacgg
    33361 cataaaaccg catccaggca ggcaggatcg gcgttggcgg caaaatggac ggcgatatgc
    33421 cgtctgaacg gctcgagtgc ctgaacgcac attgccggcc cgaggtcgga tccgcctatg
    33481 ccgatgtgga caaaatccgt aatccgtttc ccagttatcc cctgatacga accgtcgtcc
    33541 aaactgtgtg caaactccaa cgcacgattt aactcgcggc ggatttcggg caacacgtcc
    33601 ctgccgtcca cataaacggc atccgcaccg tcgggcaggc gcaaagccgt atgcagcgcg
    33661 gcacgcccct cgctgccgtt gactttcgca cccgtccgca aagcacgcat tttcccttcc
    33721 aaatccgccg tctccgcaag acggcagagc agttgcagcg tatcttcgcc caaacggttt
    33781 ttgctgtaat cgaacaacat cccgtccaaa cgctcatgca tacgctcaaa acggtcgggt
    33841 tcgcaggcaa agcggtcgcg caaaaggaca tgacgcgtat cctgataatg gcgttcgagc
    33901 gcataccatg cacgggtaaa agcattcatc tgttttcctt gatttttcag aaccggatta
    33961 aaatgtagca gaatgtagtt taacaaacgg cagcggcttt ggcgaatctc cggaacaccg
    34021 cccgccgcgt ccaatagcac cttatttcca tatggcgaaa atatagtgaa ttaacaaaaa
    34081 tcaggacaag gcggcgagcc gcagacagta caaatagtat ggaaccgatt cacttggtgc
    34141 ttcagcacct tagagaatcg ttctctcttg agctaaggcg agccaacgct gtaccggttt
    34201 ttgttaattc actataccct ccggccgaca tttgacccgc aacaatatcc tgcaagattt
    34261 attgtgtacg cataaatgcc ggacagccgc ctaaataagg tataatcgca tccgattctg
    34321 tcccgtttgc cgcccgcagg cgggatgtcg gcggttttca tcttaccggg aacacgccgg
    34381 tactgttttt taacgatgtt tcttacattt tattccaatt actttacggg gctagaatat
    34441 ggctaaaaac ggaggatttt ctttgttcgc aaagaaagaa aaacgcttta tctttgaagg
    34501 caggcattcc gcctccgaca aactggtcaa cggcgaagta tccgcgttta ccgaagaaga
    34561 ggcgcgcaaa aaactggcaa aacgcggcat ccgcccgttg cagattaccc gtgtgaaaac
    34621 aagctccaag cgcaaaatca cacaagaaga catcaccgtt ttcacccgcc agctgtccac
    34681 gatgattaaa gcgggcctgc cgctgatgca ggcatttgaa atcgtggcgc gcggacacgg
    34741 caacccgtct atgacggaaa tgctgatgga aatccgaggc gaagtggaac agggcagctc
    34801 gttgagccgc gcattctcaa accacccgaa atatttcgac cgcttctact gcaacctggt
    34861 tgcggcaggc gaaacgggcg gcgtattgga aagcctgctg gacaaattgg caatttacaa
    34921 agaaaaaacc caggccatcc gcaaaaaggt aaaaaccgca ctgacctatc cggtatccgt
    34981 catcgccgtc gccatcggtt tggtattcgt gatgatgatt ttcgtactgc ccgcctttaa
    35041 agaagtttac gccaatatgg gcgcggagct tcccgcactg acccaaacag tgatggatat
    35101 gtccgacttt ttcgtctcat acggctggat ggtgctgatc gcactgggct ttgccatata
    35161 cggcttcctt aaattgaagg cgcgttcgat taaaatccaa cggcgtatgg atgccatact
    35221 gctgcgtatg ccgattttcg gagacattgt ccgcaaaggg acgattgccc gctggggcag
    35281 gacgacagcg acgctgattg cggcaggcgt gcctttggtc gatgtattgg actccactgc
    35341 cggcgcggcg ggcaatttaa tctatgaaga agccacccgg gaaatccgta cgcgcgtcat
    35401 ccaaggtttg tctatgactt cggggatgcg tgcgacggaa ctgttcccca atatgatgtt
    35461 gcagatgtct tccatcggcg aggaatcggg ttctttggac gatatgctca acaaagccgc
    35521 cgaattttac gaagacgagg tggacaatgc ggtcggcagg ctgtccgcta tgatggagcc
    35581 gatcattatc gtgattttag gcttggtcat cggcacgctt ctggtcgcca tgtatctgcc
    35641 gctgtttaat ttgggcaacg tggtcgcctg atttgccgca cagatccggc gcggattcgc
    35701 tctgcgccgg tttgtttttg ttttgaatac attgagaaca aaatatgtct gatttgtctg
    35761 tattgtcgcc gtttgccgtg cctttggcag cggtgttcgg gctgctggtc ggcagtttct
    35821 taaacgtcgt catttaccgc gtgccggtca tgatggaacg cggctggacg gtatttgcca
    35881 aaaaacattt aaacctgccg ctgaccgaaa aggaaagccg taccttcaac ctgatgaaac
    35941 cggattcctg ctgtcccaaa tgccgcgtgc cgatacgcgc gtggcagaac atcccgattg
    36001 tcagctacct gctcctgcgc ggcaaatgcg cttcctgcca aaccaaaatc agcatacgtt
    36061 atcccttaat cgagctgctg accggcgtat tattcgggct ggtcgcctgg caatacggct
    36121 ggtcttggat tacattgggc ggtttgatac tgaccgcgtt tctgatttcc ctgaccttta
    36181 tcgatgcgga cacccaatac ctgcccgact cgatgacact gcccttgatt tggctggggc
    36241 tgatatttaa tttggacggc ggcttcgtgc ctttgcagtc tgccgtttta ggtgcggttg
    36301 ccggctatgg ttcgatatgg cttttatgcg cggtatataa actgattaaa ggcgaaatcg
    36361 gtatgggcaa cggagatttc aaactgattg ccgcattggg cgcgtggctc ggcatatccg
    36421 cattgcccgt gctgattttt gtttcctcgc tgatcggttt ggtcgcggca atcgttatgc
    36481 gcgtcgccaa ggggcagcat tttgccttcg gccccgcact gacagtttcg ggctggataa
    36541 tttttacggc aaacgattcc gtatggcggg cggtcaactg gtggctgacc catccggtgc
    36601 tgtaagatga cggtatgggt cgggctgacc ggcggaatcg gcagcggcaa atcggcagcc
    36661 gcgcaatgtt ttgccgattt gggcgtgccg cgcatcgatg cggacgcggc ggcgcactcg
    36721 ctgacggctt cagacggcat cgccctgccg gaaatcaggc ggctgttcgg cgacaccgtt
    36781 tttgacacac agggtttgtt gcggcgcgac atattgcgta aagaagtctt tgcctcccca
    36841 tcgcgaaaag ccttgctcga atccgtgatg ttgccgctga ttttctcaga aatcaaaaaa
    36901 cagcaagaaa cctttaccga tgcggtttac ggcattgtcg aaattccgct gctgacggaa
    36961 aagcgtcaat ttgtcagcct gatacggcgt gtcctgacca taagcgcacc tttggaaaaa
    37021 cgtatcggca gggtgatggc ccgcagcggg ctgacgcgcg gcgaggtggc ggacatcatc
    37081 agccatcagg catccgaatc cgaacgcctg ctgcttgcag acgatgtgct gctcaatgac
    37141 ggcagcctca aaagcctgtg tgagaaaaca atgcgcctgc acgcgtttta ttcagggatt
    37201 ttcgcctcaa aaccaacaca aggaaaacac aatgactgaa tcgcggcaaa cacgccttca
    37261 agtcaaatgt ccgacctgtc aaacggcagt agtatggaaa ccggaaaacg cattccgccc
    37321 cttctgttcg caacgctgca aactgatcga cttgggcgga tgggcagacg ggaaatatac
    37381 ggtttccagc caaacggaaa gtttgccgga aatatccgaa cccgacatgg cataccgctg
    37441 accgccccgc cttcccggca aacaccctga aagtcaaatg ccgtctgaaa caaacacgct
    37501 tcagacggca ttttcattct caaacctaat cgttggtatt tgccgttacc tcttccaatg
    37561 aagtaatgcc ctgcataact ttcaaaatac cggcccggcg caaatccacc ataccctcct
    37621 tataggcaac gtccaaaata tccacttccg taccgttgtt cataatcaca cgctgcattt
    37681 cttcgctgat gggcataacc tcatacacgc ccgcacgccc cttataaccc tgcccccggc
    37741 aacggtcgca accgacggcg cggtaaagtt tccaatcttt tgcaaggtcc tcatcggtga
    37801 agccgacttc cttcaaagca gaggcagacg ggcgttccac ttcctgtttg cagctcgaac
    37861 acagcctgcg taaaagacgc tgcgccataa tcaggctgac cgaactggca atattaaacg
    37921 gcgcgacacc catattcagc atacgcgaca acgtcgccgg cgcattattg gtgtgcaggg
    37981 tggaaaacac catatgccct gtttgtgccg ccttaatcgc aatatcggca gtttccaaat
    38041 cacgaatctc accgaccata atgatgtccg ggtcctgacg caggaaagac ttcaaagcag
    38101 cggcaaaagt caggccctgc ttatcattga cgttaacctg attgatgccc ggcaggttaa
    38161 tctcggcagg gtcttccgcc gttgcaatat ttaccgactc cgtattcaaa atattcaaac
    38221 aggtatagag cgacaccgtc ttacccgaac ccgtcggacc ggttaccagc accatcccgt
    38281 agggacggtg aatcgcttcc aacaacaatt ttttctgaaa cggctcaaaa ccgagctggt
    38341 cgatgttcaa agacgcggca tcggaattca aaatccgcat cacgaccttt tcgccaaaca
    38401 gcgtcggcaa tgtgctgaca cggaaatcga caggcttgcc gcccttttga aaggtcagct
    38461 gcatcctgcc gtcctgcggt atccgttttt cggaaatgtc caaacgcgac attaccttaa
    38521 tccgggaagc aagctgcccc cttaccgcaa tgggcggctg aaccacctcg cggagctgcc
    38581 cgtccacacg gaaacggata cgggcattgt gttcgtaaaa ctcgaaatgg atgtccgatg
    38641 ccccgctgcg caaggcatcc gacaaagtct tatggataaa cctcggaaca gggccgtctt
    38701 ctgcctcctc gttgtcgata tacagggtgt ggctttcctc ttcctcctgc ccctccccaa
    38761 gctcctgaag cagcgatgtc gaacgcgaac ccacccaatc gagcaaaccc gccaactggt
    38821 catcctcgac aatgaccaac tcaacctcaa tccctgcggc agaaacggtt ttctgaattt
    38881 gcggcatctg tgtcggatcg gaaaccgcaa aaaatacttt gtcgccccga cggaaaaccg
    38941 gcacacagtg gaactccacc atctgctcct ccgtcaacac ccccatcagc accctgtggc
    39001 gcggataatg acgcaaatca agaatcgaat aactgaacac cctcgcaatc aatgccgcaa
    39061 gcgacttggg cgaaatgaca ccgtctgaaa acagcatcgg caacacttcc ttacccgcct
    39121 gcgactcatt gtagtaatgc tcggcctgct caacagtaac cacctggttt tgaaccagaa
    39181 tcctcagcaa acctacgctc atacgacctt atccccaaat ttattcattg ttatacctgt
    39241 acagctttta tagt
//
LOCUS       DAXHKG010000003        39141 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.003, whole genome shotgun sequence.
ACCESSION   DAXHKG010000003 DAXHKG010000000
VERSION     DAXHKG010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 39141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39141
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.003"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            407..538
                     /locus_tag="ACFMWP_000107"
     CDS             407..538
                     /locus_tag="ACFMWP_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890778.1"
                     /translation="MQNQNTRPVKIELKGEAGKRVLLAAARRIAKTHQKAVKALADK"
     gene            535..903
                     /locus_tag="ACFMWP_000108"
     CDS             535..903
                     /locus_tag="ACFMWP_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HFC5890779.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMACLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
     gene            1236..1832
                     /locus_tag="ACFMWP_000109"
     CDS             1236..1832
                     /locus_tag="ACFMWP_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC5890780.1"
                     /translation="MSVIALTSLFVSVFTLFYIFRHSVQFNLWGAAEWLMFWQLTVVS
                     VTAVIALGTIFINKKTSKQKATLDVILNDYQDAQFVEADNHISPYIRGTAVDDNNARI
                     DLYEIYQNKGGQWEKERGHLLTVINRHEFYACAINSGVLDEDLFKRLHCTNFIKLWNA
                     VSPLVMKIREEERKDTIFRELEILVALWKANPLKASDL"
     gene            2191..2427
                     /locus_tag="ACFMWP_000110"
     CDS             2191..2427
                     /locus_tag="ACFMWP_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HFC5890781.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDVGNEVV"
     gene            2429..2776
                     /locus_tag="ACFMWP_000111"
     CDS             2429..2776
                     /locus_tag="ACFMWP_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC5890782.1"
                     /translation="MYIPDKGDIFHLNFDPSSGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSSGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(2829..3338)
                     /locus_tag="ACFMWP_000112"
     CDS             complement(2829..3338)
                     /locus_tag="ACFMWP_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890783.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRNRNLPATTTAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
     gene            complement(3350..3823)
                     /locus_tag="ACFMWP_000113"
     CDS             complement(3350..3823)
                     /locus_tag="ACFMWP_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-Ala-D-Ala carboxypeptidase family
                     metallohydrolase"
                     /protein_id="HFC5890784.1"
                     /translation="MQVTKNFSLRELTRSETARRAGVPNEPSPADMDNIYYTAQQLEK
                     IREYVGRPIIVTSCFRSERVNKLVGGSPTSAHRHGLAADCDASGMTSPAFAKLLIKMR
                     DEGALKFDQLILEFPERGDGAWVHIGFRRNSPQRNQILTATKKNGKTVYLPGLHP"
     gene            complement(3962..4237)
                     /locus_tag="ACFMWP_000114"
     CDS             complement(3962..4237)
                     /locus_tag="ACFMWP_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890785.1"
                     /translation="MKLLLILSAAPSLISAYLMICRLNGRKWSALSPEAWAYLAFLGG
                     AIYTFYIVFAYGLTPSLGKFMMDIAACVYFGSRSVRVVKWRHRHGLK"
     gene            complement(4234..4659)
                     /locus_tag="ACFMWP_000115"
     CDS             complement(4234..4659)
                     /locus_tag="ACFMWP_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890786.1"
                     /translation="MSEPIITPAAVYIFGGVVGAGYLLGMPVDAVVLGAVASAAVTMI
                     SEPKSRWMVVAYIVIGGLLGGAFAPPLTHFLIGEVVGSHPSLGEQRIQFAHAFAPVVV
                     GLLWQVLLRFARAVWPSFEKHADDIVEWLLNLLPWRPKK"
     gene            complement(4723..5094)
                     /locus_tag="ACFMWP_000116"
     CDS             complement(4723..5094)
                     /locus_tag="ACFMWP_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890787.1"
                     /translation="MSKDKNQITVGINREIIDTETDSSAEFHVIRHVSLDYATGFNVV
                     LLDSYVRKSTFERRGRSVGSMQLNIPGVPPRGTDVLDWAYQAVVAAVEGGAVDAYGQP
                     ISANSLTGAELVYADLPEAAI"
     gene            complement(5162..5368)
                     /locus_tag="ACFMWP_000117"
     CDS             complement(5162..5368)
                     /locus_tag="ACFMWP_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890788.1"
                     /translation="MKAVRDIALWLAVTVWINFFPDSYRYDTVPQGRHGYWHADHPWY
                     PYARFLLPLFLACILFYRHFRKRK"
     gene            complement(5385..5831)
                     /locus_tag="ACFMWP_000118"
     CDS             complement(5385..5831)
                     /locus_tag="ACFMWP_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890789.1"
                     /translation="MDQAKRTAYVKIINALFDGAVKVQPSQITETVVDMVDKMFDEIA
                     TCHERIRPMAVLADGIAGSIVKLAPNEIPLIFGNSSFGSYLKSKTRDEVFKVLKQSKV
                     NNAGKVLEAFYESWLKYTAKDRRLKVCIVTAQSRWRSRFEMELLGI"
     gene            complement(5902..10167)
                     /locus_tag="ACFMWP_000119"
     CDS             complement(5902..10167)
                     /locus_tag="ACFMWP_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC5890790.1"
                     /translation="MGGKSGGGQRTPYEAPNSLSSAQSLRIIDAVSEGVVSGFANGDD
                     APFKSVYFDDTPVQNSDGSYNFNGVTGYFQRGEQDQSYVPGFDASERTVAVSAAVKQN
                     QPMVRAVTDELVSRLRITVAVERNAQVEDNGDTVPADTLMRVELINSNGVQASNQVRF
                     NEKSSGTYYQDVEFDVVPQVPFNIRVFRISPDSKTDKVSNNTYFSSYVEIVDAKLSYP
                     HTAFAALSIDSAQFGNQIPRRNYLMKGRLVKVPSNYNPETRQYTGGTWDGSFKTAWTN
                     NPAWVFYDVLTQPRFSTLARRLNVADIDKWSLYQIGKYCDEPVDDGFGGKEPRFVCNA
                     YITDLMQAGEFLNNLASVFTGLPVWNGQQVSVVMDADADPVAQYTNANVKDGLFNYAG
                     AALKSIHTAVHVQYIDKYDGYRAKTEYVADNEAIARYGLNIKQITAFGCDSRGQAARF
                     GAWTLQTELRQQNAVTFEIGREGLKHLPYDIVQIMDNQYAGAELSGRVAAISGNVLTL
                     DRPVSDAVGALVFYSEGGSLKSAKITAAAGNKVTLEREVPLQAGDTWVLSGKVKPRLY
                     RAIGIKENTDAGTYTVTALLHDPKKYAAVDSFAHFDHEITTLHNTAPVLTDAAVNTDG
                     GTVVVTWDNLAANGQVLTYDIKIYRNNSLYRHIPDAQTAEIRLENLPNGNYRAEIRGR
                     NARGVLSAPLVKAWSIDYTVTGLRTTPKTLSVTVDWVLPQTVVSDLVFELWYSKTNNL
                     QTATKLASLAYPQNSYTLTGVGVADVYYFWVRIRDIAGNTGEFTAAVQGRADNNPAPI
                     VQQIQGAIGKSALSRELIDTLNRDMAAAAGLKVSAEAAERAKALQEEARARTAAIQAE
                     SSARTAELARKSSEIGTRIAATEAVNEQQAQQIQTVTSAQGNTAAGLEAEKKARTDGD
                     RAEAQARETLAVRLGNAESGISALRETVTRQDAARSSEINTLTAKLENVEVGGRNYAL
                     STGTAGKVLTASENNQTKTVTIDVSSALDLKQGDSLIISCDIELVNATSPHGKPYPRI
                     GAEFSVIYADNSVGYFAAWYGEAVSGTTKTLKQRIVAKHTVAKEVKALRSFIVQARYQ
                     TSESIKVSNVKLERGTVATDWSPAPEDSNADTSALTTLSAKVQQASSAVAEIGGKIQS
                     LYTLKTEAIAGGRRAVAGVAVGADGKTGSGEILLMADKVAYVDPKDKTVTPAFVTVIE
                     NGKAKQALNGDLFATGSILAKHIAANQTIEAPTLNGATVNAGLIKGGTIRGARIEAVD
                     LEAANIIGDVVAVRTFELKQSPLGYQELICQIPDSRKTRRTVIVPPVFAVAENGAVVS
                     LQLHMDGVIQREVTIQSPEKRIARNEKFSVWVPGPPPLYIRTPQEVPLSFSVPFHLPK
                     TGSISFQKGIDGAAHSLHILCRISGNFDYSPLGDLSGIVCLIV"
     gene            complement(10303..11025)
                     /locus_tag="ACFMWP_000120"
     CDS             complement(10303..11025)
                     /locus_tag="ACFMWP_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HFC5890791.1"
                     /translation="MITVCLYGGLREYGRRFVLHVETPAEALHALFTQIKGLRQRIRD
                     GVYQVRFDGKDQSEETIGSVFRRPADGVLHIVPRVQGAGKNGGLIQTIVGVVLIVVGA
                     YTSWASGAQLIAVGIGMVAGGVAQMLTKQPKLDADGKGVEESKNSAFSNLANTTAQGR
                     PVPLAYGLCYCGSRVVSQGVQSRRIEPSSTAASSGAVLNLGLSKTFVQGVAATAPNGQ
                     KYRTDFSDDSVRARNYKAAFSG"
     gene            complement(11022..11777)
                     /locus_tag="ACFMWP_000121"
     CDS             complement(11022..11777)
                     /locus_tag="ACFMWP_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC5890792.1"
                     /translation="MMDLDLLSEEARREMLACAEEAVPSEMCGVLVFSYEGYEFLPLS
                     NCAENPHETFEISADDWMAAERVGEIVAVVHSHPRGEPFLSGADRWMQVETGLPWILV
                     TQGRLKLFRPVPHLRGRVFEYGKTDCGALVRDAFMLMGLVFPDHPRGDMDEDAAAGFW
                     EKHLENCGFSRVSDGLCAGDVVLTATGGHASHAVLYLGNDWMLHHAYNQLSCRVPYTR
                     YWADVTHSVWRHPDFEPAMMQALENDFTHMEQA"
     gene            complement(11774..12496)
                     /locus_tag="ACFMWP_000122"
     CDS             complement(11774..12496)
                     /locus_tag="ACFMWP_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030430 - host cell cytoplasm [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0046718 - symbiont entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HFC5890793.1"
                     /translation="MNPRIKAMSGVMLQALSAAQQDVLVDLWQVDLRPLGGRVFYFCN
                     QVNERGTAVVWQGQAYEPYPIKADGFESTSQGAGNRPTLTVSNLLGLITGAADQFGQL
                     VGVLVVRRQTYAKFLDAVNFQSGRNPTADPMQEVVGKYLVERMTALNAETATFELAAP
                     SESDGSVIPARIMLANTCCWQYRGEGCGYTGRAVADRFDMPTDDASKDVCSKTLTGCR
                     ARFGATAVLPFGGFPSSDKVTT"
     gene            complement(12556..12825)
                     /locus_tag="ACFMWP_000123"
     CDS             complement(12556..12825)
                     /locus_tag="ACFMWP_000123"
                     /inference="COORDINATES: protein motif:HMM:NF017726.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC5890794.1"
                     /translation="MTETFRWRVASDNKAVHKFDVRSVRFGDGYEQRQPKSLKPKLRS
                     WEIKIVGQKALMGEIKAFFDARRGVEPFNWRPPDGVPVLVKVSEY"
     gene            complement(12847..16065)
                     /locus_tag="ACFMWP_000124"
     CDS             complement(12847..16065)
                     /locus_tag="ACFMWP_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HFC5890795.1"
                     /translation="MNNETKIYITAETGGVVSGVEKAKQSIKSLGDVASSQGRRISDG
                     LVHSGDGAEKSSTVVSAASKRTERSLASLENAIRRDIAVKIAGGKANREYYEELARQR
                     GIDIARLNPLLSQLDRHNTQTNRATQSVKQFNNALRQTPAQITDIVTQLAGGQSPFLI
                     MIQQGGQLRDMYGGFGGMLKGLATVISPMRLAVAGLGGGIAALGYAMYQGAEESCEYR
                     KALILAGDAAGITADRMQEIAVSVGAATGGYADARAAITALVSSGKVATDNYEQFARS
                     ITLQSQATGQSIDDLVEKYTEIAKDPLKAVVSLSATYRTMTADVYQQVKALQAQGREQ
                     DAVALVQRKFSEESEDMAKRVLGNLGLIERAWKDIKESASEAWDAVKSIGRDKTKLDE
                     IAALDSFISQIETSKKHPVTQLFWGEEGERKLQEAYARRARLRAEIDKEAAAAETLRQ
                     KQKQNQNRTEGIAELEAVSERYATREQQRQRELLKNDKARKKALDGITDAKKRQEIIN
                     KHAANAKLINESFAEKKHERQKEKTDKTSYPTVSNGLRIKPGAEAGGKALGGTYAFAH
                     AMQQMLGDRLFRFGAFRDRYHIGKNSLHNSGLAFDATPSPGMGMKQKQEVVAQMTRYL
                     ESLGFKNGQDFNLKLELAGQRNKNGTVATGDHWHFNWRSREAAARFAGGVEGQVKNMA
                     HLGLFKGVEKEPLSGYEKWHEDFNRRAAEAGAKRVLEILNGNRAIGEQLKLLSDPTFG
                     DWTLKQQADARELAEKADAQDSLTAASKKYSDIVKQMTDDSKEKLDDRLFEISLIGKT
                     REEIEKLTLARLWDRQIAKAREEGAPLESIDLLERGKAEGMSNLSQMQKARADSDNDW
                     RGGIESGLKSYIDSFGTMRQAMENATVQTFDKMGDALADFVATGKLDFRSLTVSILQD
                     LSKMLIKMAIVNAMKSALGYADGGIVGGGSTQFDALFSGGGYTGYGGKYEPAGIVHKG
                     EVVFSQRDVRNHGGVAAVERLRLNGYAGGGAVGLPSVLTGVRSAGAGSMQVNITINRD
                     GSTESDSSADTEMAKHLAAAIPGMVEQWYVKNVYRENGTYHK"
     gene            complement(16058..16330)
                     /locus_tag="ACFMWP_000125"
     CDS             complement(16058..16330)
                     /locus_tag="ACFMWP_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1799 domain-containing protein"
                     /protein_id="HFC5890796.1"
                     /translation="MNVFGFSADDFSEKETTFGVWPCNWQAVQLFIGVSTQWRIGMSG
                     ATGLDYSAVAAVMECGNIKSKKRKALLEKVRLMELEVLSMWAGEHE"
     gene            complement(16378..16689)
                     /locus_tag="ACFMWP_000126"
     CDS             complement(16378..16689)
                     /locus_tag="ACFMWP_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HFC5890797.1"
                     /translation="MAKLTLKPDATFRHTVKIPVPGAEPADVEFEFKARGRKAMKEFT
                     EKHKDGWTADTVLDCVQGWDLEEAFDRQNVEILLDSYPMAVFAIVNGYVEEVFNAREG
                     N"
     gene            complement(16753..17394)
                     /locus_tag="ACFMWP_000127"
     CDS             complement(16753..17394)
                     /locus_tag="ACFMWP_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC5890798.1"
                     /translation="MAVKLPNGATVHIATALAAEKKATVATNAAECVLTVAGHGFANG
                     DLVLFKSGWGKLNERVFQIGDVKADTFKLTGIDTSNADEFPAGSGIGAVQKITDWVQV
                     SQIVEFSTSGGEQQYVDFGFLEDDFDQQIPSTKSAMSMSIKIADDTSLSGYKAAAKCS
                     DKGGKWPLKVVLKGGGLICYNGYPSMNKTPELVRNQVMAVTLSYAISGEVNRY"
     gene            complement(17426..17845)
                     /locus_tag="ACFMWP_000128"
     CDS             complement(17426..17845)
                     /locus_tag="ACFMWP_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890799.1"
                     /translation="MTSRLTEIRNAATDVLKTKFQRVYSGRGFAPAQSQLPCVVVYVD
                     RRRTEQETFDFPPTYRHTVRLVTLVCVQAASGADELAEEMLSLIGQLFAEHSDLGVGD
                     LENLVPDLLNIDSDESGEAVTVYYQQGWQAIYFDTAV"
     gene            complement(17826..18128)
                     /locus_tag="ACFMWP_000129"
     CDS             complement(17826..18128)
                     /locus_tag="ACFMWP_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890800.1"
                     /translation="MFNEPLNVFTNPADFGETVMIGGKEVNAIFDREFITDSGFGVAV
                     ANADPQIIVTEDDLPEDVKSVVVTVRGKRYAVAETDFDGCGMVVVQLRAIHDKPTY"
     gene            complement(18121..18348)
                     /locus_tag="ACFMWP_000130"
     CDS             complement(18121..18348)
                     /locus_tag="ACFMWP_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890801.1"
                     /translation="MAKIKIIPTRSFFDGEQTFATGKKYSVDESAAAVYIREGWAAEA
                     PAKEAESPVADGGEAEDSGNASGEGGEDGSV"
     gene            complement(18406..20298)
                     /locus_tag="ACFMWP_000131"
     CDS             complement(18406..20298)
                     /locus_tag="ACFMWP_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HFC5890802.1"
                     /translation="MKKMKPDKAQMQQMSRFAVFQRESVDVEKRTVEVAFSSEESVRR
                     WFGDEVLSHAQGAVDLSRLNDGGAVLFNHDWDDQIGIIERAWIDADKRGRALVRFGNG
                     TKATEKFQDVQDGILRHISVGYRVEDMVLDNPDTDDEGYRYIVTRWMPYEISFVTVPA
                     DPTVGVGRSVEPFIENPVNPTPEKGNRNMDKNQTPTTVETSAAAIPAAAATDTNNTAE
                     RGMQNERARVSELLAIGRSYAAHGGIEAAEKVIKEGGSEAQLRAAIMANMQTKPTVTA
                     GEIGMTDKEQREFSLLRAMSAAATGKWDKAGLEREVSEELEKRHGRAAAGFFVPTDLI
                     ARAYSKGNAANGGNVIENDFREDLFIELLRNRLAVAQLGATVLDGLVGDITIPKHLTG
                     NTVQWVDENGSATESNATFGQMSLKPKTVTANTELSRKFILQSSLSAEQFARSELLKA
                     MMLGIDLAAINGKGTGNEPTGILNTAGIGAVEIGANGGAPEWKHIVALESAIAAANAD
                     IGDLAYITNARVRGLLKTKLKADGVSGYIWQDGATPLNGYRCAVSNQIPSNLTKGTAA
                     NKCSPLIFGNWSDLMIAHWGVLDVIVDPYTKSTTGAVRITTLQDVDIAVRHVESFAAI
                     KDIAAA"
     gene            complement(20279..21841)
                     /locus_tag="ACFMWP_000132"
     CDS             complement(20279..21841)
                     /locus_tag="ACFMWP_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HFC5890803.1"
                     /translation="MAKQSNAAPKKRGFFARLFGRREAVPKTARRNFAGARPVGSLAS
                     WQPQNWSADALARSDLDRLRTRARSLARDNDYMRKFLNMVESNVIGRDGFALQMRVLL
                     DNADKPDALANKAIEAAFSRWARRGVCDVTGQMSFTDLQRLLIRSVARDGEVLIRHIS
                     GFDNDYGYALQVLDIDRLDTGYNVPQQNGRNAVRMGVELNSYSRPVAYWLRTAHPGES
                     YGQTNTGNLRERVPAEQISHIFLHDRPEQRRGFPWVASAIIGLQNLSGYQEAAIIAAR
                     VGASKMGFFKQTEDADNFMPPIDGQEVDNGRGSIDLIDSVEPGTFHELPQGYDFTPFD
                     PDYPHANYDAFVKASLRGIASGLNVAYHSLANDLEGVNFSSIRSGTLEERDTWMTLQN
                     WFADAFLYDVFDRWIEAALLMGAIKMPSGKSLPAGKLDKFKACNWQGRRWSWVDPLKD
                     INAHKEAVALAVKSRRDICAEMGLDFEDVITQIEQENQMLAGKGIIADVKPAASAAEP
                     ESEDNPNEENEA"
     gene            complement(21850..22104)
                     /locus_tag="ACFMWP_000133"
     CDS             complement(21850..22104)
                     /locus_tag="ACFMWP_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890804.1"
                     /translation="MSGHDYAVELEEAREILNSLRKAYKEHAAGRGMTKRYKIKDREM
                     EFSSLADLLKQIRFWQQEIKRLEAAAGVSPRRSGRIITRF"
     gene            complement(22091..22477)
                     /locus_tag="ACFMWP_000134"
     CDS             complement(22091..22477)
                     /locus_tag="ACFMWP_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HFC5890805.1"
                     /translation="MEKQDNITPPHYRSRAVECIEFTERLNFCMGNAFKYVWRHREKN
                     GAEDLKKARWYLQRQLDSCAVMHLLEPEEYAELMDGLEKCELDDLMQHVLEEILYHAF
                     FESEDSLLAAMCGVSELLKGYGDERT"
     gene            complement(22480..22689)
                     /locus_tag="ACFMWP_000135"
     CDS             complement(22480..22689)
                     /locus_tag="ACFMWP_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890806.1"
                     /translation="MYDVFKTRAAELSGAFCSLDFWLCHKFVPLCHALCHFLTRRDID
                     TLIEEGLVEERFEQGVSKFYAKEAV"
     gene            complement(22706..25552)
                     /locus_tag="ACFMWP_000136"
     CDS             complement(22706..25552)
                     /locus_tag="ACFMWP_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5906 domain-containing protein"
                     /protein_id="HFC5890807.1"
                     /translation="MNKKYATKAEINAAAHDRWREVLEACGIPSEILDKKHHPCPSCG
                     GSDRFRFTDGSGSSRGSGVWICNQCKPEGGSPFDLLMDVCGYSFNEARDKVASLLGLA
                     HGDLVDKAPKLLPPPAPVKEEERDLWKPIVPVPEYALNSMSFGNGFRKSDDLIFKSVF
                     RDSSSAVLGGVARFRKSDGGKIDLPYTFCEHKKTGEKMWRWRCWDNPRPLYGLDSLVA
                     DPSLPVLVVEGEKCKNAADAQGYNYAVLTWHGGCNNWDKSDWSAVVDRDVVLWPDCDS
                     LRQKLTKKDRDDGVDPESKPFLPRNEQGGMKAMLGIAEVLTKQNCRVWLVNIPAPGIW
                     PHGFDIADAIADGGRICDPSEVLSWMGAADWLVEYVPEAEMPSENSPAPIQDMEPESE
                     QLHESLEATGNQGGAGDVDDEYLAKLQKLKSEFGLVEGKDHGVNRKTGVTYTRKAMTV
                     HFGKDVVDAWYEWGRAPVLTMYEINRLKKDYALIQAVKDDDTQDMMERFIYLDGSASI
                     WDNKLWRVVPEKAARLSMTPDGFKIWVNSPSRIVKRFDRLVFEPGRVLSDDYINIFRG
                     MPIEPKFPIPKEDMPETNYELYRLFPEIKPILNLINHLCNGDYQQVEYILNWLAYPLQ
                     NVGAKMTTAVVMHGHIHGAGKSFFFEEIVKPMYGEYGATYGQEDLESNYTANRSGKMF
                     GIFEEVYTNQQKYNKTGSQKHMITGKTMRVERKFQDAYEEANHMNCVFLRNESHPFKI
                     EENDRRYFVVWPEKKLDKKLRDEVLDCIGNDGVRLFYSFLLCWNFYLTYGQQGAENEK
                     GYEVIKLEEPVRFDPNTPPPMTAAKQNVISYGRYAWQTFYSEWAGGGIKDLPFCCCIT
                     DDLWLVYKEWCRQNGERETGKTKFLQHIAEKMPRARRWWRTKNKDGDVSCQNWIFKPA
                     GWQAADGLPEMDALGNEVLRFRSAGWRYRGGEEV"
     gene            complement(25667..26014)
                     /locus_tag="ACFMWP_000137"
     CDS             complement(25667..26014)
                     /locus_tag="ACFMWP_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890808.1"
                     /translation="MNRTKTCKECGEIKPITAFPKNGFDRKTGLQKYAPRCRRCHNVY
                     QQDLLYKRREKEFEQKQAVMAALMDAEREKEEAAKARSIAQSLVLAKAACPILHIGLW
                     TEPLFIPQGMLQI"
     gene            26414..27130
                     /locus_tag="ACFMWP_000138"
     CDS             26414..27130
                     /locus_tag="ACFMWP_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HFC5890809.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
     gene            27233..27658
                     /locus_tag="ACFMWP_000139"
     CDS             27233..27658
                     /locus_tag="ACFMWP_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890810.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYGPTD"
     gene            27889..28089
                     /locus_tag="ACFMWP_000140"
     CDS             27889..28089
                     /locus_tag="ACFMWP_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890811.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            28157..28516
                     /locus_tag="ACFMWP_000141"
     CDS             28157..28516
                     /locus_tag="ACFMWP_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890812.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVPNTSSTLKMVRSN"
     gene            28541..29395
                     /locus_tag="ACFMWP_000142"
     CDS             28541..29395
                     /locus_tag="ACFMWP_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HFC5890813.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTLLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGIIA"
     gene            29467..29682
                     /locus_tag="ACFMWP_000143"
     CDS             29467..29682
                     /locus_tag="ACFMWP_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890814.1"
                     /translation="MTITEEYSIDIRVTAEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRKALICLAKDNLKNAA"
     gene            29718..29978
                     /locus_tag="ACFMWP_000144"
     CDS             29718..29978
                     /locus_tag="ACFMWP_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO1622 family putative holin"
                     /protein_id="HFC5890815.1"
                     /translation="MKYLIRTALLAVVAAGIYACQPQSEAAVQVKAENSLTAMRLAVA
                     DKQAEIDGLNAQIDAEIRQREAEELKDYRWIHGDAEVPELEK"
     gene            29975..30268
                     /locus_tag="ACFMWP_000145"
     CDS             29975..30268
                     /locus_tag="ACFMWP_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890816.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            30271..30462
                     /locus_tag="ACFMWP_000146"
     CDS             30271..30462
                     /locus_tag="ACFMWP_000146"
                     /inference="COORDINATES: protein motif:HMM:NF037202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type ISP restriction/modification enzyme"
                     /protein_id="HFC5890817.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            30462..30602
                     /locus_tag="ACFMWP_000147"
     CDS             30462..30602
                     /locus_tag="ACFMWP_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HFC5890818.1"
                     /translation="MDTLLKIIIALSFSGAEALAVWLFITAADAVLRRFPKPSHYRRV
                     KK"
     gene            30599..30808
                     /locus_tag="ACFMWP_000148"
     CDS             30599..30808
                     /locus_tag="ACFMWP_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HFC5890819.1"
                     /translation="MNINELGARIDRPTIRELIAYATCRNRPISNSTLLRMEKDGRIP
                     CRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(30866..31783)
                     /locus_tag="ACFMWP_000149"
     CDS             complement(30866..31783)
                     /locus_tag="ACFMWP_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005634 - nucleus [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HFC5890820.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMSRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(32651..33130)
                     /locus_tag="ACFMWP_000150"
     CDS             complement(32651..33130)
                     /locus_tag="ACFMWP_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC5890821.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
     gene            complement(33566..33946)
                     /locus_tag="ACFMWP_000151"
     CDS             complement(33566..33946)
                     /locus_tag="ACFMWP_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC5890822.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADYHHKMSGNPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAIKTAVAKAFKLY"
     gene            complement(34101..35297)
                     /locus_tag="ACFMWP_000152"
     CDS             complement(34101..35297)
                     /locus_tag="ACFMWP_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC5890823.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGGRSWK
                     LSFVQDGRQQTISLGRYPDFSLADAREWREEVRRKRAHGENVVNKKVRADFAFEKVAR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERAKTGNMAALSPSELPRLIDFLE
                     QRNEFAVYAGRVRIHPVTRLCIYWLLLTMTRIQEAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMQWVLDQARALNVNGRFVFESVNFQGHINKESPRVAMQRAGLDTTAHG
                     LRLLARTYLREVLKVDNDVAEKLLAHSLGTRTQTAYNRSELWEERKDALERWGNDVLR
                     LAKNGK"
     gene            complement(35489..35578)
                     /locus_tag="ACFMWP_000153"
     tRNA            complement(35489..35578)
                     /locus_tag="ACFMWP_000153"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35542..35544),aa:Ser,seq:cga)
     gene            complement(35656..35746)
                     /locus_tag="ACFMWP_000154"
     tRNA            complement(35656..35746)
                     /locus_tag="ACFMWP_000154"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35710..35712),aa:Ser,seq:tga)
     gene            complement(35829..36608)
                     /gene="yaaA"
                     /locus_tag="ACFMWP_000155"
     CDS             complement(35829..36608)
                     /gene="yaaA"
                     /locus_tag="ACFMWP_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HFC5890824.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLNTDQIQ
                     YLQGRVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKTLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            complement(36870..38057)
                     /gene="dapC"
                     /locus_tag="ACFMWP_000156"
     CDS             complement(36870..38057)
                     /gene="dapC"
                     /locus_tag="ACFMWP_000156"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HFC5890825.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTLNSDTEILPVLGSREA
                     LFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWNDEQHVIDNRRLYQEKFEWVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            complement(38133..38585)
                     /gene="dut"
                     /locus_tag="ACFMWP_000157"
     CDS             complement(38133..38585)
                     /gene="dut"
                     /locus_tag="ACFMWP_000157"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HFC5890826.1"
                     /translation="MNIEVEMKVLDERMADVVPVYATKGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVVVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            38728..>39141
                     /locus_tag="ACFMWP_000158"
     CDS             38728..>39141
                     /locus_tag="ACFMWP_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HFC5890827.1"
                     /translation="MTHISSPRNEFIRGIKESSPMLIGLLPWALILGMQGGQKGMSWL
                     EMLLMTGMNFAGGSEFATVNLWAEPLPILLIATVTFMINSRHILMGAALAPHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNMP"
BASE COUNT         9745 a        10763 c         9025 g         9608 t
ORIGIN      
        1 cggatgcctg attatcgggt atccggggag gattaagggg gtatttgggt aaaattagga
       61 ggtatttggg gcgaaaacag ccgaaaacct gtgtttgggt ttcggctgtc gggagggaaa
      121 ggaattttgc aaaggtctca acttgaacaa aaaagaaccg ccctgattca gggcggttat
      181 gttttctggc ggaaacggtg ggattcgact aaattttatt tcattgattt aaatatattt
      241 atttcttatg aaaatttaat ttaccataaa aacagccata tacaaaaatc ttggagtaac
      301 tattgcatta cactattaga agaatgccgt ctgaagtgtt ttcggacggc atttcccaag
      361 ctgccggaaa aaagctaaaa tgcccgcaaa cagacaagga gcagcgatgc aaaaccaaaa
      421 tacacgcccc gtcaaaatcg agcttaaagg cgaagcaggc aaacgcgtac tgcttgccgc
      481 cgcccgccgc attgccaaaa cccatcaaaa agccgtcaag gcacttgccg acaaatgata
      541 gacggcgaac tggtcgcgct tatccatcaa accgtattgg cggatgaagc gggtttgaaa
      601 gggcgggcgg atatggcgtg cttggacggc gcattgtcgc ggattgccaa ctggcggcag
      661 tatgaaaacc ttgaggacat ctacgaaatc gccgccctct atgcacaagc catagccaaa
      721 gcccacgcct ttcccgacgg caacaagcgc accgcgcttt taacaatgtt gacctatctg
      781 gatttgcagg gcatcagcat tgccgccgac caagggcttg acgacttgat tgtcagtttg
      841 gcggcgggag aaaccgactt caaacagctc gccgaaaccc tgcgccggct ggataaggaa
      901 taggcatatc cgacaacaat gccgtctgaa attcagacgg catttttatt gaaaggcttt
      961 tttgcaaccg ctttacacaa aggcggtttt tttatgccgt ctgaaagccc ttcagacggc
     1021 atttgtttac acggcaggag tccccccgcc tttaagcagg agaggatgtc aaggatgcct
     1081 gatttttaaa tcaccccttg aaagaacggg cgcacggcat taatatacag atatcgacaa
     1141 gcaaggttac aaccattaag gaaatacgat gaaatacaaa aatgagggtt ttaatggctg
     1201 gtaaggtgcg gaaacaaata aaacaaggag gttggttgtc agtaattgcc ctaacctcct
     1261 tgtttgtatc tgtattcact ttattttaca tattcaggca cagcgtacag tttaacctat
     1321 ggggggcggc cgaatggctg atgttttggc aactgaccgt tgtttcagta accgccgtca
     1381 ttgcactggg gacaatattc atcaataaga aaacttcaaa gcaaaaggcg acattagatg
     1441 ttattttgaa tgattaccaa gatgcacaat ttgtagaagc cgacaatcat atttcgcctt
     1501 atattcgcgg cacggcagtt gacgacaaca acgcgcggat cgacctgtat gaaatttatc
     1561 aaaataaggg cggacaatgg gaaaaagaga gagggcattt acttaccgta atcaatcggc
     1621 acgagtttta tgcgtgcgca atcaactcgg gagtattgga tgaggatttg tttaaacggc
     1681 tgcattgcac caacttcata aaattgtgga atgcagtttc gcctcttgtt atgaaaatac
     1741 gcgaagaaga acgcaaagac acaatattta gagagttgga aattttggtt gcattatgga
     1801 aagcaaaccc cctaaaggca tctgatttgt gaataaacag tcaaaactgt tctgaaatat
     1861 gggcagccac gcaatcgccg aaatacgcca aagcagcctt ataaagtgat tttttgaaca
     1921 taattttctc cttgcggagc attttccaat caaacagttt tagtttactt ggttttgtat
     1981 ccctaaacaa ccgaaatccg acatcaagca attagaaagc ttttgcatct tgaaaatgga
     2041 taacaaaata ttgcctgaag gcgcaaatac agtacaaaag ccgtccgaaa cagttcggac
     2101 ggcttttggc gtattctgca caagtatttg aacaactgaa attttatggt aatatgtatc
     2161 tactttgtag atacaataaa ggtgaagatt atgttgcgtg tccaaaaatg ggggaactcg
     2221 gcggccgtcc gactgcctgc cgacatgctg aaacaattgg attttaaaat cggcgacgct
     2281 ttggtagcgg aagtacataa cggcgaactc cgtgtgcgtg ctgcccgacg tttccgcttg
     2341 gcagacttgc ttgccgaaat ggaagaaacc ccgccgcgcg tagaaggctg ggaaatcttg
     2401 gatgatgtcg gcaacgaggt cgtctgaaat gtatattccc gacaaaggcg atattttcca
     2461 tttgaatttc gacccttcca gcggcaagga aatcaagggc gggcggtttg cgctggctct
     2521 gtctccaaaa gcattcaacc gcgcaacggg attggttttt gcctgcccca tttcacaggg
     2581 gaatgcagcg gctgcacgaa gcagcggcat gatttcaacc ttactcggtg caggaacgga
     2641 aacgcagggc aatgtccact gccaccagct caaatctctg gactggcaaa tccgcaaggc
     2701 ttcttttaaa gaaactgtac ccgattatgt attggacgat gtgctggcgc gcatcggcgc
     2761 cgtcttattc gattaaatgc tgaaaccgcc cgaacctgta atcttttctt acaggttcgg
     2821 gcggttgctt attcggcacg ctgactgctt actgcatgac catatgcctg ccattccctt
     2881 aaatcggctg catgtccgtc ggctgtttct gccagtcctg catatttttc agcgcactgt
     2941 ccgaataata gccagccttg ggaatctgac gcgccatcag atgcggtggc ggcggtagtg
     3001 gttgcgggca ggtttctgtt gcgattttgg gcggcggcgt agtggcgcag gcggttaagc
     3061 tcaagacgca tagcggcaac agttttttca gcattttgtt tttcctcttc taatttggtt
     3121 tgtcgttcgg caaacgcggc agcggccttc tgctcggcag aacgcgcctg ctttgcctgc
     3181 tcgatatagc cgtctttcag acgattcgaa atttcggcag cagcagcctc ccgtcccatg
     3241 cggtattttt cggcacggtc gaaatgccat gcggtaaaaa tcaggacgat tagcagcaat
     3301 acgcctaccg gcttccagta tttcaataaa atatccattt cagacgacct caaggatgca
     3361 gcccgggcag atacacggtt ttgccgtttt tcttggttgc ggtcagtatc tggttgcgtt
     3421 gcgggctgtt gcgtcggaaa ccgatgtgta cccatgcgcc gtccccgcgc tcgggaaatt
     3481 cgagtatcaa ctggtcgaat ttcagcgcgc cttcatcacg cattttgatt aacagtttgg
     3541 caaatgccgg cgaggtcata cccgatgcgt cacaatcggc ggcaagtccg tgccggtgcg
     3601 ccgatgtcgg gctgccaccg accaatttgt ttacccgctc gctgcggaag cagcttgtta
     3661 cgataatcgg gcgaccgacg tattcgcgga ttttttcaag ctgctgtgcg gtgtaataaa
     3721 tgttgtccat gtcggcgggc gacggttcgt tcggtacacc tgcgcgacgc gcggtttcac
     3781 tgcgtgtcaa ctcgcgcaga ctgaaatttt tggtaacttg catttcggtt ctccatgttc
     3841 ttttcaaata aaaaaccgcc taaacgacag gcggctatct caataattct gcgtataaag
     3901 ttttgatacg aaaacgccgc gaagctgcat actttgcggc gttttgcttt tttcaggcaa
     3961 actatttcaa accatgccga tgccgccatt tgacaacccg taccgaacgg ctgccgaaat
     4021 atacacaggc ggcaatatcc atcataaatt tgcctaagct cggcgtcagt ccgtaagcaa
     4081 agactatgta aaaggtatag atcgctccac ctaaaaaggc gagatacgcc cacgcctccg
     4141 gcgacaatgc actccatttg cgcccgttca gacgacaaat catcaagtac gccgaaatca
     4201 gtgatggggc ggcagaaaga atcaaaagta atttcatttt ttcggtctcc acggcagaag
     4261 attcagcagc cactccacaa tatcgtctgc atgcttttcg aacgatggcc agacagcgcg
     4321 ggcaaatctc aacaatacct gccacaacaa gccgacaacg acgggggcaa aggcatgtgc
     4381 aaactgtatg cgctgctcac ccagcgacgg atggctgcca actacttcgc cgattaagaa
     4441 atgcgtcagc ggtggggcaa aagcgccacc caaaagcccg ccgataacga tataggccac
     4501 taccatccag cggcttttcg gctcgcttat catcgttacc gccgccgaag ccactgcgcc
     4561 cagcacgact gcatcgacag gcatccccaa cagataacct gcgccgacca cgccgccaaa
     4621 aatataaacg gcggcagggg taataatcgg ttcagacatt ttcttttccc ttatgcgaag
     4681 gtcgtctgaa actgtttttc agccgacctt ccgtgttatg aatcagatgg ctgcttcagg
     4741 caaatcggca tagaccaact ccgcgccggt caggctgttg gcggaaatag gctgaccgta
     4801 ggcatcgacc gcgccccctt caaccgctgc tacaacagcc tggtatgccc agtccaatac
     4861 atccgtaccg cgaggcggca cgcccggaat attcaactgc atcgaaccga ccgaacgtcc
     4921 gcgacgttca aatgtcgatt tgcgcacata gctgtctaac aacaccacat taaagccggt
     4981 tgcataatcc agcgacacat gtcggatgac gtgaaactcg gcagaactgt cggtttcggt
     5041 atcgatgatt tcacggttga ttccgacggt gatttgattt ttgtcttttg acatgatggt
     5101 ttcctttgga taaaaaaaga ccgtctgaac cattcagacg gtttcggttt tgcagccgta
     5161 tctatttccg tttccgaaaa tgacggtaga aaaggataca ggctaaaaat aaaggcagca
     5221 gaaagcgcgc atagggatac cacggatggt ctgcatgcca gtatccgtgc cgtccctgtg
     5281 gaacggtatc atagcggtaa ctgtcgggga aaaagttgat ccaaaccgtt actgccagcc
     5341 ataaggctat atccctgact gctttcattt acttctgctc ctgtttaaat tcccagcaat
     5401 tccatttcaa agcgcgaacg ccaacgggat tgcgcggtta cgatgcagac tttcagacgg
     5461 cggtcttttg cagtgtactt taaccagctt tcgtaaaatg cctcaaggac tttaccggca
     5521 ttattaacct tgctttgctt caacacttta aacacttcat cacgggtttt acttttcaga
     5581 tagcttccaa acgacgaatt cccaaaaata agcggaattt cgtttggcgc aagtttgaca
     5641 atacttcctg caataccgtc tgccaacacc gccatcggcc tgatgcgctc atggcaggtc
     5701 gcaatttcgt caaacatctt gtccaccata tcaacgacgg tttcggtaat ttgactgggc
     5761 tgcaccttga cagctccgtc gaataaagcg ttaataattt taacataggc tgtacgtttt
     5821 gcctgatcca taaataaacc tccataaaaa agcccaccct caggcaggca gaaaaaagcc
     5881 gtcctttcgg acggctaaaa tttaaacaat aagacagaca atacccgata aatcgcccaa
     5941 gggtgaataa tcaaaattgc cgctaatgcg gcagaggata tgcaacgaat gtgctgcacc
     6001 atcgataccc ttctgaaaag atatactgcc tgtctttggt agatggaatg ggacggaaaa
     6061 actaagaggc acctcctgcg gagtccttat atacagcggc ggagggccag gaacccatac
     6121 ggaaaacttt tcgttacgcg ctatcctctt ttcaggtgac tgaatcgtaa cctcccgctg
     6181 aatcacacca tccatgtgca gttgtagact gacaactgca ccattttctg caacagcaaa
     6241 aaccggcggc acgataaccg tccggcgtgt ttttcggcta tcagggattt ggcatatcaa
     6301 ttcctgataa cctaatggcg actgcttcag ctcaaacgtc ctgaccgcca cgacatctcc
     6361 gatgatatta gcggcctcca aatccacggc ttcaattcgc gcgccacgta tcgtaccacc
     6421 cttaattaga cctgcattga cggttgcacc attcagcgtt ggggcttcga tagtctggtt
     6481 ggcagcgatg tgctttgcca gtatcgaacc agtcgcgaac aggtcgccgt tcaaagcctg
     6541 cttcgccttg ccgttttcga taacggtaac gaaagcgggc gtaaccgtct tatctttcgg
     6601 atcgacataa gcaactttat ctgccatcag gaggatttcg ccacttcccg tctttccatc
     6661 ggctcccact gcaacccctg caactgcccg acgaccgcct gctattgcct cagtcttcag
     6721 cgtgtacaaa gactgtattt tccctcctat ctctgcaaca gcagaactgg cctgctgaac
     6781 tttagccgac aaggtagtca aagcagacgt atcggcgtta ctgtcctccg gtgcaggact
     6841 ccagtcagtt gctaccgtgc cgcgctccag ttttacattt gaaaccttga tggattctga
     6901 tgtctgatac cgcgcctgaa cgatgaagct tcgaagtgct ttaacctctt tggcaaccgt
     6961 gtgtttggcg acaatacgct gtttcagcgt tttggtcgta ccgctgacgg cttcgccgta
     7021 ccacgcagca aaataaccta ccgagttgtc cgcatagatt acggaaaatt ccgcaccgat
     7081 tcgcgggtat ggtttgccat gaggcgatgt ggcgtttacc agttcgatat cgcacgagat
     7141 aatcaaacta tcgccttgct tcagatccaa agcagacgaa acgtcgatag tgacggtttt
     7201 ggtctgatta ttctcgctag cggtcaacac tttgccggct gttcctgttg ataaggcata
     7261 attccgaccg ccgacttcaa cattctccag cttcgccgtc aacgtgttga tctcagacga
     7321 cctggcagca tcctgacgtg ttacggtttc ccgcaatgcc gaaataccgc tttctgcatt
     7381 accaagtctg acagccagtg tttcacgcgc ctgcgcctcg gctctgtcgc catcggtacg
     7441 ggcttttttt tcggcttcca gcccggcggc ggtattgcct tgcgcagacg taacagtttg
     7501 gatttgctgc gcctgctgct cattgacagc ttctgttgcg gcaatacgcg taccgatttc
     7561 ggatgacttt ctggcaagct cggcagttcg ggcagatgat tccgcctgta ttgccgccgt
     7621 tcgcgcccgt gcttcctcct gtaaggcttt agcacgttcc gctgcctctg cagacacttt
     7681 caaccccgca gccgcagcca tatcacgatt cagcgtgtct atcagctccc tgcttaatgc
     7741 agacttcccg attgcaccct gaatctgctg cactatcggc gcaggattgt tatctgccct
     7801 accctgtacg gcagcggtaa attcccccgt atttcctgca atatcacgta tgcgcaccca
     7861 gaaataataa acgtcggcaa cgccgacgcc ggttaaggta taactgtttt gcggatacgc
     7921 cagcgacgcg agtttcgttg ccgtctgaag attgttggtc ttgctatacc acagctcgaa
     7981 aaccaaatcg gaaacaacgg tttgcggcaa tacccaatcc acggtcacag acagtgtttt
     8041 cggcgtcgtc ctcaatccgg taacggtata gtcgatactc caagccttaa ccaacggtgc
     8101 ggacagtaca ccccgtgcat tacggccgcg tatttccgcc cgataattgc cgttcggcag
     8161 attttccaaa cgaatttccg ctgtctgtgc atcagggata tggcggtata ggctgttgtt
     8221 acggtaaatc ttaatatcgt aagttaaaac ctgaccgttt gcggccaggt tgtcccatgt
     8281 caccacaact gtcccaccgt cggtattgac agccgcatcg gtcaacacag gggcagtgtt
     8341 gtgcagcgtg gtaatttcat ggtcaaaatg cgcaaaacta tccacggcag catatttttt
     8401 cgggtcatgc agcaacgcgg taacggtata agtacccgca tccgtattct ctttgatgcc
     8461 gatggcacgg tagaggcgcg gcttgacttt gccggataaa acccacgtat cgccagcctg
     8521 caacggcacc tcacgctcca aagtaacctt attgcctgct gccgcagtta tcttcgctga
     8581 tttcagacta ccgccttcag aataaaacac caaggctccg accgcatcgg atacaggtcg
     8641 atccagcgtc agcacattgc ccgaaatggc ggcaacacgt ccagacaact ctgcacctgc
     8701 gtattgattg tccataatct gcacgatgtc gtaaggcaga tgcttcaacc cctcacgccc
     8761 gatttcaaac gttacggcgt tctgctgccg caactcagtt tgcagcgtcc atgcgccgaa
     8821 acgtgccgcc tgcccgcgcg aatcgcagcc gaacgcagta atctgcttga tattcaaacc
     8881 atagcgggca atggcttcgt tgtcggctac atattctgtt ttagcgcgat agccatcgta
     8941 tttgtctata tactgcacat gaacagcagt atgaatggac ttcaacgctg cacccgcata
     9001 attaaacagg ccgtctttaa cattggcatt ggtatattgc gccaccggat cggcgtcggc
     9061 atccatgacg acggatactt gctgtccgtt ccaaaccggt aaaccggtaa agacgctggc
     9121 aagattgttc aaaaattcac ctgcctgcat caggtcggta atgtaggcgt tgcagacgaa
     9181 acgcggctct ttgccgccga agccgtcatc gaccggctcg tcgcaatatt tcccgatttg
     9241 gtacaggctc catttgtcta tgtctgccac attcagacga cgtgccagcg tggaaaatct
     9301 cggctgggtc agcacatcgt aaaaaaccca tgccgggttg tttgtccatg cggttttgaa
     9361 actgccatcc catgttccac ccgtatattg gcgggtttca ggattgtaat tggacggcac
     9421 tttgaccaag cggcctttca tcaaataatt gcgacgcgga atctgattcc cgaactgcgc
     9481 cgaatcaatc gacaatgccg caaacgcggt atgcggatag ctcaatttcg catcaacgat
     9541 ttcaacgtag gacgaaaaat aggtattgtt gctgaccttg tcggtcttgg aatcaggcga
     9601 aattcggaaa acgcggatat tgaacggcac ttgcggcacc acatcaaatt cgacatcctg
     9661 ataatatgtc ccgctggatt tttcattgaa acgcacctga tttgatgcct gcacaccatt
     9721 gctgtttatc aactcaacgc gcattaaggt atcagcaggc acggtgtcgc cgttgtcttc
     9781 aacctgtgca ttccgctcga cagcgaccgt aatccgcaaa cggctgacca attcgtcggt
     9841 aacggcgcga accatcggct gattctgctt caccgcagcc gaaacggcta cggtgcgctc
     9901 ggaagcatcg aaacccggaa cataggactg gtcttgctcg ccacgctgga aataacccgt
     9961 aactccatta aaattgtagc tgccgtccga attttggaca ggagtgtcat caaaatacac
    10021 gcttttgaac ggcgcatcat cgccgttggc aaaccccgaa accacacctt cggataccgc
    10081 atcaataatc cgcagcgact gggcgctgga taaactgttt ggggcttcat aaggtgtccg
    10141 ttgtcctccg cccgatttgc cgcccatatt gtttcctttc ctgattcaaa accttacttc
    10201 acggtattca gaataccgat caaagcccaa aaatacacaa acaaaaacag acacgccgcg
    10261 aagtttgctc cttcgcggcg tttcgatttt tcagacgaca tttcagcccg aaaacgccgc
    10321 cttataattg cgcgcccgca cgctgtcgtc tgaaaagtcg gtacggtatt tctgcccgtt
    10381 cggcgcggtt gctgctacgc cttgaacgaa tgtcttggac aaacccaaat tcaacaccgc
    10441 acctgacgaa gccgccgtcg atgacggttc gatacggcgg gactgcacac cctgcgatac
    10501 aacacggctg ccgcagtagc aaagcccgta agccaacggc acagggcgac cctgtgccgt
    10561 tgtattggca aggttggaaa aagcagaatt cttactctcc tccaccccct tgccgtcggc
    10621 atccaatttg ggctgtttgg tcaacatttg ggcgacaccg ccagccacca taccgatacc
    10681 gacggcgata agctgcgcac cactggccca actcgtatac gcaccgacta caatcaaaac
    10741 cactccgaca atggtttgga tcaacccgcc atttttacct gcaccctgta cgcgcggaac
    10801 aatgtgcaat acaccgtcag caggtcgtct gaaaacgcta cctatcgttt cttccgactg
    10861 gtctttaccg tcaaaccgaa cctgatacac cccgtcccga atccgctgac gcaagccttt
    10921 gatttgggta aacagagcgt gcagggcttc ggctggcgtc tcgacgtgca aaacaaaacg
    10981 gcggccgtat tcgcgaaggc cgccgtacag acaaacagta atcatgcttg ctccatatgg
    11041 gtaaaatcgt tctcaagtgc ctgcatcatg gccggctcga aatcgggatg ccgccaaacg
    11101 ctgtgcgtaa catccgccca atagcgggta taaggtacac ggcagctcaa ttgattgtag
    11161 gcatggtgca gcatccagtc gttgcccaaa tacaggacgg catgggacgc atgcccgccc
    11221 gttgccgtca agaccacatc gccggcgcaa aggccgtctg aaacacggga aaacccgcag
    11281 ttttccaaat gcttttccca aaagcccgcc gctgcgtcct catccatatc accgcgtgga
    11341 tggtcgggaa aaaccagccc catcagcatg aaggcatcgc gcaccagcgc gccgcaatcc
    11401 gtcttgccgt attcgaatac acgcccgcgc aaatgcggaa cggggcggaa cagtttcaga
    11461 cggccttgtg taaccaaaat ccaaggcaag cccgtttcga cctgcatcca tctgtctgca
    11521 cccgataaaa acggctcgcc gcgcggatgg gaatgcacga ctgccacaat ctcgccgacg
    11581 cgctccgccg ccatccagtc gtcagcggaa atctcaaagg tttcatgcgg attttcggcg
    11641 caattggaca aaggcagaaa ctcatagcct tcataactga aaaccaaaac cccgcacatt
    11701 tcagacggta cggcttcttc agcacacgcc agcatttcgc ggcgggcttc ttcacttaac
    11761 aaatccaaat ccatcatgtc gttaccttat cactagatgg gaaaccgccg aacggcaaaa
    11821 ctgccgtcgc gccaaaccgc gccctacatc ctgtcagtgt tttgctgcat acgtctttgg
    11881 acgcatcgtc cgtgggcata tcgaaacggt cggcaaccgc acgccccgta taaccgcacc
    11941 cttcgccgcg atactgccag cagcaggtat ttgccagcat aatacgggcg ggaatgaccg
    12001 aaccatccga ttcggacggc gcggcaagtt cgaaggttgc cgtttctgca ttcaatgccg
    12061 tcatccgttc aaccaaatat ttgccgacga cttcctgcat cgggtctgcg gtcggattgc
    12121 gcccggactg gaaattgacc gcatctaaaa acttggcata ggtttgacgg cgcacaacca
    12181 gcacgccgac gagctgaccg aactgatccg ccgcgcccgt aatcaaaccc aagagattcg
    12241 ataccgtcag cgtcggacgg ttacccgcgc cttgcgaagt tgattcaaag ccgtcagcct
    12301 taatcggata aggctcatat gcctgtccct gccagacaac cgccgtaccc cgctcgttga
    12361 cctgattgca gaaatagaaa acccgaccgc ccagcggccg caagtccact tgccacaaat
    12421 cgaccaaaac atcctgctgc gcggcagaca aggcttgcag catcacaccc gacatggcct
    12481 ttatacgcgg attcatgaaa gcacctcctc aaacgtacag ctcaattcgt aggctttgcc
    12541 acccttcgcc gtttcctaat attccgatac cttgaccaat acaggcacgc cgtcgggcgg
    12601 tctccaatta aacggctcaa caccgcgccg ggcatcaaaa aaggctttga tttctcccat
    12661 caaagccttt tgtccgacta tcttaatctc ccagcttcgc agcttcggtt tcaaagattt
    12721 aggctgccgt tgctcgtagc cgtcgccaaa gcggacggaa cggacatcga atttatgtac
    12781 agccttattg tccgaagcaa cacgccatcg gaatgtttca gtcatgatcg gttcctttca
    12841 gacgacctat ttatggtaag taccgttttc acggtacaca ttcttgacat accactgttc
    12901 caccatgccc ggtatggcag cggcaagatg cttcgccatc tccgtatcgg cactgctgtc
    12961 cgattcggtg ctaccgtccc gatttatagt gatgttgacc tgcatgcttc cagccccggc
    13021 cgaacggact ccggtcaaaa cggacggcag tcctactgcg ccgccaccgg cataaccatt
    13081 caaccgcagc cgctcgacag ccgcaacgcc gccgtgatta cgtacgtccc gctgggaaaa
    13141 tacgacttcg cccttgtgaa caatgccggc aggctcatac ttcccgccgt agccggtata
    13201 gccgccgccg gaaaacaacg cgtcgaactg cgtacttcct ccaccgacaa taccgccgtc
    13261 ggcataaccc aacgccgact tcattgcatt gacaatcgcc attttaatca gcatttttga
    13321 caaatcctgc aaaatggaaa cagtcaggct tcgaaaatca agtttgcctg tggcaacaaa
    13381 gtctgccagc gcatccccca ttttgtcgaa ggtttgtacg gtggcatttt ccatcgcctg
    13441 cctcatcgtt ccgaatgaat cgatgtagct tttcaagccg gactcgatac cgccgcgcca
    13501 atcattgtcg ctgtctgcac gcgccttctg catttgagaa agattgctca tcccttccgc
    13561 cttgccgcgc tccaataaat cgatactttc caacggcgca ccttcttcac gggctttcgc
    13621 tatctgtctg tcccacagtc tcgccagcgt cagtttctcg atttcttcac gggttttgcc
    13681 gataagcgaa atttcaaaca gcctgtcatc caacttttct ttcgaatcgt cggtcatttg
    13741 cttcactatg tcggaatatt ttttggaggc ggccgtcaaa ctatcctgcg catcggcctt
    13801 ctccgccagc tcgcgggcat cggcctgctg cttcagcgtc caatcgccga aagtcgggtc
    13861 ggacaacaac ttcaactgtt cgccgatggc gcggttgccg tttaaaattt ccagcacccg
    13921 cttcgctccc gcctccgccg cccgacggtt aaaatcctcg tgccattttt cgtagccgga
    13981 aagaggttct ttctccactc ccttaaacaa cccgaggtgc gccatatttt tcacctggcc
    14041 ctcaacaccg ccggcaaatc gcgcagccgc ctctcgagaa cgccagttga aatgccagtg
    14101 gtcgccggtt gctaccgtac cgtttttatt gcgctgtccg gcaagttcca gtttaaggtt
    14161 aaaatcctgc ccgtttttaa accccaacga ctcaagataa cgggtcattt gggcgacaac
    14221 ttcctgtttc tgcttcatcc ccataccggg agaaggagtg gcatcaaatg ccaatccact
    14281 gttatgcagg ctgtttttcc caatgtggta tcgatctcgg aaggcgccga aacggaacag
    14341 acggtctccc agcatctgct gcatggcatg cgcgaaggca tatgttccgc ctagcgcttt
    14401 gccgcccgct tcggctcccg gtttaatcct caagccgttc gaaacagtgg ggtagcttgt
    14461 tttatccgtt ttttctttct gtcgttcgtg ttttttctcg gcaaaacttt cattaatcag
    14521 cttggcattt gccgcgtgct tattaatgat ttcttgccgc tttttcgcgt cagtgatgcc
    14581 gtccaacgcc tttttccgtg ctttgtcgtt tttaagcagt tcgcgctgcc gttgctgctc
    14641 tcgagtggca taacgttccg aaacagcctc caattcggct ataccttcag ttcgattttg
    14701 gttctgcttc tgtttctgcc gcaaagtttc agcagcggct gcctccttgt cgatttcggc
    14761 acgcaaccgg gcacgccgcg cataggcttc ctgcagctta cgctcaccct cttcacccca
    14821 aaacaattgt gtaaccggat gtttcttgct ggtttcgatt tgggaaataa acgaatctag
    14881 cgcggcaatt tcatccagct tggtcttgtc cctacctatg gatttaacag catcccatgc
    14941 ctccgacgca ctttctttaa tatccttcca cgcccgctca atcaacccaa gattacccag
    15001 tacgcgtttt gccatatcct ccgactcttc ggagaatttc cgctgcacca atgcaaccgc
    15061 gtcctgttcc cgaccttgtg cctgcaaagc cttgacctgc tggtaaacat cggcagtcat
    15121 tgtccggtag gtggctgata gggataccac agctttcagc gggtctttgg cgatttcagt
    15181 atatttctca accaaatcgt caatactttg ccccgttgcc tgcgactgga gggtaatact
    15241 ccgggcgaac tgttcgtaat tgtccgttgc aaccttgccg cttgagacca aggccgtaat
    15301 tgcagcacgc gcatcagcat agccgcccgt cgctgccccg accgaaacag cgatttcctg
    15361 catcctgtct gcagtaatcc ctgctgcatc tccggcaagt atcaaggctt tacggtattc
    15421 gcacgattcc tctgccccct gatacatcgc ataacccaat gccgcaatgc cgccgcccaa
    15481 ccccgcgaca gcaaggcgca taggggaaat gaccgtggcc agtcccttaa gcataccacc
    15541 gaagccgcca tacatatcac gcaactgccc accctgttga atcatgatca gaaacgggct
    15601 ttgcccgcct gcaagctggg taacgatgtc ggtaatttgt gccggggttt gccgcaatgc
    15661 gttattgaac tgcttgacag actgcgtagc gcgattggtc tgcgtattat gcctgtccaa
    15721 ttgggacagt agcggattaa gccgtgcaat atcgataccg cgctggcgcg caagctcttc
    15781 gtaatactct cggtttgcct taccgcctgc aatcttaacg gctatatcgc ggcggatggc
    15841 attctccaga gaagccaaag accgttccgt ccgcttcgat gccgccgaca ctaccgtcga
    15901 tgatttctct gctccgtcgc cactatgtac caatccgtca gaaatacgcc gcccctggga
    15961 agatgccaca tcccccaaag acttgatgga ttgttttgcc ttttctacgc cgctgacgac
    16021 accgccagtt tcggcggtaa tataaatctt ggtttcgtta ttcatgttcg cctgcccaca
    16081 ttgacaacac ttcaagctcc atcaggcgga ctttctccaa cagtgctttc cgtttcttcg
    16141 acttgatatt gccgcattcc ataactgctg cgactgcgga ataatccaac cccgtcgcac
    16201 ccgacattcc gatacgccac tgcgtcgata ctccaataaa cagttgcacc gcctgccagt
    16261 tgcacggcca tacgccaaaa gtggtctcct tttctgaaaa atcgtccgcc gaaaatccga
    16321 atacattcaa ttccgccgcg tcaggctgct tctcataaag cgcacgcgcg gcggcaatca
    16381 gtttccctcg cgggcattga aaacttcctc aacatagccg ttgacgatgg caaacaccgc
    16441 catcggatag ctatccagca ggatttcgac attctgccgg tcgaatgctt cttccaaatc
    16501 ccagccttga acacaatcta agacggtatc tgccgtccag ccgtctttat gcttttcggt
    16561 aaattctttc attgccttgc ggccgcgcgc cttaaattca aattcgacgt ccgcaggttc
    16621 tgcaccggga acagggattt ttacggtatg tcggaaagtt gcatcaggct tcaaagtgag
    16681 ttttgccatt tcaatactcc aaataaataa ggttgcccga gtaactcgga caaccttgat
    16741 atgccgataa aatcaataac ggtttacttc gccggaaatg gcgtaggaca acgttaccgc
    16801 cattacttgg ttacgaacca attcgggggt tttattcatg ctgggataac cgttatagca
    16861 aatcagccca ccacctttca aaaccacttt caaaggccac ttgccgcctt tatcgctgca
    16921 ttttgcagcc gccttgtagc cggacaacga agtatcgtca gcgatcttaa tcgacattga
    16981 catagctgat ttcgtggatg ggatttgctg gtcaaaatcg tcctccagga aaccaaaatc
    17041 cacatattgc tgctcgccgc cactggtcga aaattctaca atttgcgaaa cttgcaccca
    17101 atcggtaatt ttctgaacag caccaatacc gctgcctgcc ggaaactcat ctgcattgga
    17161 agtatcaatg ccggtcagct tgaatgtatc ggctttgaca tcgccaatct ggaaaacgcg
    17221 ttcattcaac tttccccagc cgcttttaaa caaaaccaaa tcgccgttgg caaacccgtg
    17281 tcctgctacc gtcaggacgc attcggcagc attagttgcc accgtagctt ttttctccgc
    17341 cgccaaagcg gtcgcaatgt gaacggtcgc accgttcggt aatttcactg ccatacttta
    17401 actccaaatt aaaggcaatc tgaaatcaga ctgccgtatc aaaataaatt gcctgccatc
    17461 cttgctgata atagacggta acggcctcgc cgctttcgtc ggaatcgata ttcagcaaat
    17521 caggcaccag attttccaaa tcaccaacac ccaaatcgga atgttcggca aacaactgcc
    17581 caatcaaaga cagcatctct tccgccagtt cgtccgcacc ggaagcagcc tgcacgcaaa
    17641 ccaacgtaac cagccgcacc gtatgccggt aggtaggcgg aaaatcaaac gtttcctgtt
    17701 ctgttcggcg acggtcaacg tacaccacaa cacacggcaa ctgcgattgc gcaggcgcga
    17761 aaccacgccc ggaatacacg cgctggaact tcgttttcag cacatctgtc gccgcattgc
    17821 ggatttcagt aagtcggctt gtcatgtatc gccctcaatt gcacaacaac cattccgcag
    17881 ccgtcaaaat cggtttccgc caccgcataa cgtttgccac gcacggtaac aaccaccgac
    17941 ttcacgtctt ccggcaggtc gtcttcagta acgatgattt gcgggtcggc attggcaacg
    18001 gcaacgccaa acccgctatc cgttataaat tcacggtcaa atatcgcgtt tacctcttta
    18061 ccgccaatca tcacggtttc accgaaatcg gcaggattgg taaacacgtt cagcggctcg
    18121 ttaaacactg ccgtcctcgc cgccctcacc ggatgcgtta ccgctatctt cagcttcgcc
    18181 gccatcggca acaggggatt cggcctcttt ggcaggcgct tctgccgccc aaccttcgcg
    18241 gatatagaca gccgccgcag attcgtccac cgaatatttt ttccctgtgg caaacgtctg
    18301 ttcaccatcg aaaaaactac gggtcgggat aattttgatt tttgccattt ttaatacctc
    18361 aattaataag gtcgtctgaa attcagacga ccttgggttt cacaatcaag cagccgcgat
    18421 gtctttaatg gcggcaaagg attcgacatg acggacggca atatccacat cttgcaacgt
    18481 ggtgatgcgt accgcgcccg tagtagactt ggtgtacgga tcaacaatca catccaaaac
    18541 gccccagtgc gcaatcatca aatcagacca gttaccaaaa atcagcgggc tgcatttgtt
    18601 ggccgccgtg cctttggtca ggttggacgg aatttggttt gataccgcgc aacggtagcc
    18661 gttcaacggc gttgcgccgt cctgccagat gtagccggac acgccgtcgg ccttcagctt
    18721 ggttttcagc agaccgcgga cgcgggcatt ggtgatgtat gccaaatcgc cgatgtcggc
    18781 attggcggcg gcaatggcac tttccaaagc gacgatatgc ttccattcgg gcgcaccgcc
    18841 gttcgcaccg atttccaccg cgccgatgcc ggcggtattc aggatgccgg tcggttcgtt
    18901 gccggtacct ttgccgttga tggccgccaa atcgataccc agcatcatcg ctttcaataa
    18961 ttcgctgcgg gcgaactgtt cggcagacag cgaggattgc aaaatgaatt tgcggctcaa
    19021 ttcagtattg gcggtaacgg ttttcggttt caggctcatt tgtccgaaag tggcattcga
    19081 ttcggtcgcg ctgccgtttt catccaccca ttgaacggtg tttccggtca ggtgtttcgg
    19141 aatagtgatg tcgccgacca agccgtccag tacggtggcg cccaactggg caacggcaag
    19201 tcggttgcgc agcagttcga tgaacaagtc ttcgcggaag tcgttttcga tgacgttgcc
    19261 gccgtttgcc gcattgcctt tgctgtaagc gcgggcaatc aaatcagtcg gcacaaagaa
    19321 gcctgccgct gcgcgaccat gtcgtttttc caactcttcc gacacttcgc gttccaagcc
    19381 cgctttgtcc catttgccgg ttgcggcggc agacatggcg cggagaaggg aaaattcacg
    19441 ctgttcttta tcagtcatgc cgatttcacc ggcggtaacg gtcggcttcg tctgcatgtt
    19501 tgccatgatg gcggcgcgta attgtgcttc actgccgccc tctttaataa ccttttcggc
    19561 tgcttcgata ccgccgtggg cggcgtaact gcgaccaatg gccagcagtt cggaaacgcg
    19621 cgcgcgttcg ttctgcatac cgcgttcggc ggtgttgttg gtatcggttg ctgcggcggc
    19681 agggattgca gcggcggaag tttccaccgt agtgggcgtt tgatttttat ccatgtttcg
    19741 atttcctttt tcaggggttg ggtttacagg gttttcaata aatggttcca ccgacctgcc
    19801 tacacctact gtcgggtctg caggaacggt tacaaaactg atttcatacg gcatccagcg
    19861 ggtaacgatg taacggtagc cctcatcgtc agtatcggga ttgtccaata ccatatcctc
    19921 cactcggtag ccgacgctga tatggcgtag gatgccgtct tgcacgtctt ggaatttttc
    19981 cgttgccttc gtaccgttgc caaaacgtac caaggcacgg ccgcgcttgt cggcatcaat
    20041 ccaagcacgt tcgatgatgc cgatttggtc gtcccagtca tgattgaaca acaccgcgcc
    20101 gccgtcgttc aggcggctta agtcaacagc accctgcgca tgacttaata cttcatcacc
    20161 gaaccaacgg cgtaccgatt cttcgctgga aaacgccact tcgaccgtcc gtttttcaac
    20221 atcaacactt tcgcgctgaa atacggcaaa gcggctcatt tgctgcattt gcgccttatc
    20281 aggcttcatt ttcttcattc gggttatcct ccgattccgg ttctgccgcc gatgcggccg
    20341 gttttacgtc ggcaatgatt ccttttcctg ccaacatctg gttttcctgt tcgatttggg
    20401 taataacatc ttcaaaatcc aaacccattt ccgcgcaaat atcgcggcgg gatttgactg
    20461 ccagcgccac cgcctcttta tgcgcattaa tatctttcag cgggtcaacc cacgaccagc
    20521 ggcgcccctg ccagttgcag gccttgaact tgtccagctt gccggcaggc agcgatttgc
    20581 cggacggcat cttgattgcg cccattagca acgccgcctc aatccagcga tcgaatacgt
    20641 catacaagaa cgcgtcggca aaccagtttt gcaacgtcat ccatgtgtcg cgttcctcca
    20701 gcgtcccgct gcggatactg gaaaagttca cgccctcaag gtcgttcgcc aagctgtgat
    20761 aagccacgtt caaaccgctg gcgataccgc gcaggctggc tttgacgaat gcgtcgtaat
    20821 tggcgtgcgg gtaatccgga tcaaacggcg taaagtcgta accctgcggc agttcgtgaa
    20881 acgtacccgg ctcgaccgaa tcgattaaat cgatgctgcc gcgcccgtta tcgacctctt
    20941 gcccgtcaat cggcggcatg aagttgtcgg cgtcttccgt ctgtttgaaa aagcccattt
    21001 tcgatgcacc gacacgggca gcgataatgg ccgcttcctg atagcccgac aggttttgca
    21061 ggccgatgat ggccgaagcc acccacggaa agccgcgccg ctgctctggg cggtcatgca
    21121 ggaaaatatg gctgatttgc tctgccggca cccgttcgcg taaattgccc gtattcgtct
    21181 gtccgtatga ttcgcccgga tgtgccgtcc gcaaccagta cgctacagga cgggaatagc
    21241 tgtttaactc aacacccatg cgcacggcgt tacgcccgtt ttgctgcgga acgttgtatc
    21301 ccgtatccaa acggtcaata tccagcacct gcaacgcata gccgtaatca ttgtcaaacc
    21361 ctgaaatatg acgaatcagc acttcgccgt cccgcgccac gctgcgaatc agcagccgtt
    21421 gcaggtcggt aaaagacatc tggccggtaa cgtcgcacac gccgcgccgc gcccagcggg
    21481 aaaacgctgc ttcaatggcc ttgttcgcca aggcatcggg cttgtcggcg ttatccagca
    21541 aaacacgcat ttgcagggca aaaccgtcgc gcccgataac gttgctttcg accatattca
    21601 aaaacttgcg catgtagtcg ttgtcgcgtg caaggctgcg ggcgcgagtg cgcaggcggt
    21661 caaggtctga ccgcgccaaa gcgtccgccg accagttttg cggctgccac gaagccagcg
    21721 acccgaccgg acgcgcccct gcaaagttgc ggcgggctgt tttcgggacg gcttcccgcc
    21781 tgccgaacaa acgcgcaaaa aaaccgcgct ttttcggcgc ggcatttgat tgttttgcca
    21841 tagctcatcc taaaatcgcg tgatgatacg gcctgaacgg cgcggggaaa cacccgccgc
    21901 cgcttccagc cgcttgattt cctgctgcca gaaccgtatc tgcttcaaca aatcggcaag
    21961 gctggaaaac tccatttcgc ggtctttgat tttgtaccgc ttggtcatgc ccctgcctgc
    22021 cgcatgttcc ttgtaggctt ttcgaaggct gttcagaatc tctcgcgctt cttcaagttc
    22081 taccgcatag tcatgtccgc tcatcgccgt atcccttcaa cagttcggaa acaccgcaca
    22141 ttgccgcaag cagactgtct tcagattcaa aaaatgcatg atagagaatt tcttccagta
    22201 catgctgcat caggtcatcc aattcgcatt tttccagacc gtccattaac tccgcatatt
    22261 cttcgggttc caacagatgc attacggcac aagaatcaag ctgccgctgc aaataccatc
    22321 gcgccttttt caaatcctcc gcgccgttct tttcccgatg acgccagaca tacttaaacg
    22381 cattacccat gcagaaattc agccgttcgg taaattcaat gcattccacg gcgcggcttc
    22441 gatagtgcgg cggggtgatg ttgtcttgct tttccatttt cagacggcct cttttgcata
    22501 aaatttactg acgccttgct caaaacgctc ttccaccaag ccttcctcaa tcagcgtatc
    22561 aatatcgcgg cgggttaaaa aatggcacag agcatggcac aatggcacaa atttatggca
    22621 caaccaaaaa tccaaactac aaaacgcgcc cgacaactct gccgcacgcg ttttgaaaac
    22681 atcatacata tgtcagactc aatcgtcaaa cttcttcacc gccgcgatac ctccaaccag
    22741 cgctgcggaa tcgtaaaacc tcattgccca gggcatccat ttccggcaat ccgtccgccg
    22801 cttgccagcc agccggctta aaaatccagt tttgacacga tacgtcgcca tctttatttt
    22861 tcgtccgcca ccagcgccgc gcccgcggca tcttctcagc aatgtgttgg agaaactttg
    22921 ttttaccagt ttcccgctcg ccgttttgcc tgcaccactc tttgtaaacc aaccaaaggt
    22981 cgtctgtaat gcaacagcaa aacggcaggt ctttaatacc accgccagcc cactccgaat
    23041 aaaaggtttg ccaagcatat cggccatagg aaatgacgtt ttgtttcgcg gcagtcatcg
    23101 gcggcggcgt gtttggatcg aatcttacag gctcttccag tttgattacc tcgtatcctt
    23161 tttcgttttc tgctccctgt tgcccgtaag tcagataaaa attccaacac agcaggaaac
    23221 tgtaaaacaa acggacacca tcgttgccga tacagtctaa aacttcatcg cgcaattttt
    23281 tgtccaactt tttctcaggc catacaacga aataacgccg gtcgttttcc tcaattttga
    23341 aaggatgaga ttcattacgc aaaaacacac aattcatatg gtttgcttct tcgtaagcat
    23401 cctggaattt ccgctcgacg cgcatcgtct tgccggtaat catatgtttt tggctgcctg
    23461 ttttattgta tttttgctga tttgtgtaaa cctcttcaaa aataccgaac attttgcctg
    23521 atcggtttgc cgtatagttg ctttccaagt cctcttgacc atatgttgcg ccgtattcgc
    23581 cgtacatcgg cttcacgatt tcctcgaaaa agaaagattt acccgcaccg tgtatatgac
    23641 cgtgcatgac aacggcggtc gtcatcttcg cgcctacgtt ttgtaacgga taagccagcc
    23701 aattcaaaat gtattcgacc tgttggtaat ccccattaca taagtgatta atcaaattca
    23761 gaatcggctt gatttcaggg aataatctat acaattcgta gtttgtttcg ggcatatcct
    23821 ctttgggaat cgggaatttc ggttcaatcg gcatgcctcg gaagatgttg atatagtcgt
    23881 cagacaacac ccgaccaggc tcaaagacca atcggtcgaa ccgttttaca attcggctcg
    23941 ggctattgac ccaaatttta aaaccatcag gcgtcatcga cagacgagcc gccttttcag
    24001 ggacaacgcg ccatagtttg ttgtcccaaa tcgatgccga accatcaaga taaatgaaac
    24061 gctccatcat atcttgcgtg tcatcatctt ttaccgcctg aatcaatgcg tagtcttttt
    24121 tcagacggtt gatttcgtac atagtcagca ccggcgcacg gccccattca taccaagcat
    24181 cgacaacgtc tttgccgaaa tgaacagtca ttgcctttcg ggtatatgta acccctgttt
    24241 ttctgttcac gccgtggtct ttaccttcaa ccagcccaaa ttctgatttc agcttttgca
    24301 atttggccaa atattcgtca tccacatccc ccgcaccccc ttgattgcct gttgcttcga
    24361 gagattcatg caactgctca gattccggct ccatatcttg aatgggtgcg ggagagtttt
    24421 cagacggcat ttccgcttcc ggcacatact caaccaacca atccgccgcg cccatccagc
    24481 tcaacacttc ggaagggtcg cagatgcgcc cgccgtctgc aatcgcatcg gcaatatcga
    24541 aaccatgagg ccatatccct ggagcaggaa tattgaccaa ccaaacacgg caattctgct
    24601 ttgtcagtac ctcagcaata ccaagcatcg ccttcattcc gccctgctca ttgcgcggca
    24661 gaaacggttt ggattcaggg tcaacaccat catcgcgatc tttctttgtt agcttttggc
    24721 gcagcgaatc gcaatcaggc cacaagacga catcacgatc aacgaccgcc gaccaatccg
    24781 acttatccca gttattacaa ccgccatgcc acgtcaggac ggcatagtta taaccctgag
    24841 catctgccgc gttcttacat ttctccccct cgacaaccaa aaccggtaat gatgggtcag
    24901 caaccaaaga atcaagaccg tacaatgggc gcgggttatc ccaacaacgc caacgccaca
    24961 tcttttcgcc tgttttctta tgctcgcaaa acgtataagg cagatcgatt tttccgccgt
    25021 ctgattttct aaatcgggca acaccgccca aaaccgcgct ggagctatcg cggaaaacag
    25081 atttaaaaat caggtcgtct gattttctaa atccattccc aaagctcata gaattcagcg
    25141 catattcagg cacaggaacg attggcttcc acaaatcacg ctcctcctcc tttactggag
    25201 caggaggagg taacagcttc ggagccttat ctaccaaatc cccatgcgcc aacccaagca
    25261 aggaggcaac tttgtctcta gcctcgttaa aactataccc gcaaacatcc atcaacaaat
    25321 caaacggact gccgccttcc ggcttgcatt gattgcaaat ccaaacacca ctcccgcgac
    25381 ttgaaccgct accgtccgta aacctgaatc ggtcggagcc gccgcatgac ggacaggggt
    25441 gatgtttttt atctaaaatt tcggacggta tgccgcacgc ttctaaaacc tcacgccacc
    25501 ggtcatgcgc ggcggcatta atttcggctt ttgttgcata ttttttattc attttcagtc
    25561 atcctttacg ttttttaggc gtaaaaaata cccacccacg cacacaagaa tcactctgga
    25621 gagggcgggc taaacactga ttgcgcgatt aatcagtaca gggtaattaa atctgtaaca
    25681 tcccttgagg gataaataac ggctcagtcc acaagccgat gtgcagtatc ggacaggctg
    25741 ctttcgccaa cacgaggctt tgtgcgatgc ttcgcgcctt agctgcctcc tctttttcgc
    25801 gctcggcgtc catcaatgcc gccatgactg cctgcttttg ctcaaattct ttttcacggc
    25861 gcttgtacag caaatcttgc tgatagacgt tgtggcatcg gcggcatcgg ggcgcgtatt
    25921 tttgcagccc ggtttttctg tcaaagccgt ttttcggaaa cgccgttatc ggcttaatct
    25981 ctccgcactc cttacacgtt tttgttcgat tcatcgagaa ctccaatatt aaaaattatc
    26041 gtcatcaatg cggcttcccc agcccacagc gagttttcca cgacaggctt tttttatttg
    26101 ggttggtcgt ctggtttctt tgagttcaaa aacaggtcgg gatacttaag ttttattcgt
    26161 gcaggtatcc cgcgcttcgt ccaattgaaa acgcattgag ggctattccc tgttattcga
    26221 ccaacttccg cgtaactgcc gattgattgc aacaggcgtt tgtcttcatt gactctttta
    26281 tccataaata aaccaaatgt ttaaatctaa tgctaatatt aaacactatg tttagataaa
    26341 aatcaagtct tgtgtaacaa cattttgttt aaatatggga gaataattaa gccaaccgcg
    26401 aataggatta aaaatgacaa tgcacgagac aactgacaga ctttttgaga tagccaaaga
    26461 gcagggagtt ttaaagccgg ctgacatagc agagcgtctg aatatcagcc aacaggcttt
    26521 gaaaaactgg gaaagtcgtg gcatagcggc aaaggcgctg cctgaagtag caaaagcatt
    26581 cggtgtatct gaaacatggc tgagaacagg tgaaggcagc cgaaccgcgc ccgtccttat
    26641 tgaccccgac ctaccccacg aagtcaaaga catccaccgc ccgatgacgt ggagcagcaa
    26701 cgacccgctg cccgacgatg attatgtttt cgtcccctac ctcaaagaga gctgcttcaa
    26761 aggcggagta ggcacgtatg aaatccccga ttacaacggc taccgcctgc cgttcggcaa
    26821 atccacgctt aaacgcaaag gcatcaatcc cgacaacgtg ttttgctgca ccctgaccgg
    26881 cgacagtatg gaggaaaaaa tcgcagaaga cgcggcaatt gccgtagata cgggcgaaac
    26941 cgccatacgc gacggcaaaa tctacgcctt cgcccaggac ggtatgttcc gcgtgaagta
    27001 cctgatacgg cagcccggca acagcgttct gatacgcagc cacaacagcg gtttctatgg
    27061 cgacgaaaac gcccccttgg acagcctgac cgttatcggc agggtatttt ggtggagcgt
    27121 gctggattga aaaatgttgc tattacgacg agataatatt gatagggctt tcaagattgt
    27181 caaaaatagg cgttttgatt ccccttggtg gcctggtgag tacgatgccg gtatgaattt
    27241 ccttggcgta caaggagagt tgaaggttca cgagctgcat cacagaacag caaccctgtg
    27301 ctttgagtgg cttggcgaag tatctgcgcc gcgcagaaaa gagaactaca aagacctcaa
    27361 gccaaatgta ttgtatgact ttgatggttc cggtaagcat tttgccaacc ctgacgcaag
    27421 gtatctattg cccgtcggtt caagcggctt aatcttaaaa catatccaaa tcgatgacga
    27481 agacactctg ttgcggctat ggtgcgcacg aaatatccca atgccacacc ggctatctaa
    27541 aatcccgatg cttcggcagt attatctaag caaggcatgg cacgaaattt atgctatcaa
    27601 ccaacaccta aggaaaacga agctgatagt tgatgtggca tacggcccca cagattaaac
    27661 aacccgcccg cattatgcgg gcttttttca tgccccgccg aacctgaaaa caacacaaaa
    27721 ccgacaaagc cgccttaata ggcggttttt ttgcgcctgc gaaatctcaa aaataaattc
    27781 ttttaataat caaaatgttt ataaatctta aacagattgt tgcatattat taaacgctat
    27841 gtttaaatac acccatcgaa acaaacaaca gccacatgga gtaccgacat ggaaaccatc
    27901 accatcccta aagaaaattt cgacgctttg ctaaatctcg caagaaccgc cgtcgccctg
    27961 aacgaaaatt ttattccaaa aataaattac ggagcatcca ccataccagc agccggcttt
    28021 gccgcactta acgagtttgg aatagctcgc tccaccgtgg aatctttgga aattctcaaa
    28081 attaaataac ctcctcggta ttgtcatccc gtgataccgg caacctaact aacccctctt
    28141 taaaggaaaa tcaaaaatgg aaacccaaga aaagaaattt gttcctgcct ccaagcaaat
    28201 accgaccgta aatagcggct ggttagaccg tgaattaggc gaagccatga gtgaagcggt
    28261 gcgtgcctgc cttgctcacg gtaaacagtc agaaattact gtcaagctca aaatccaacc
    28321 ccaaaacatc caaagcggaa cggtaaaaat cagccacgat gtagcaacca aactgcccaa
    28381 agaaaaacgc gaaggcggca tcgtctttgc tacacctgac ggcaacatcc aagccgacga
    28441 tccggcacaa ggaaaattga aactcaaaca agttcccaat acgtcaagca cgttgaaaat
    28501 ggtcagatcc aactaactca aacccaaaag gaaatctaaa atggaaaccc aagaaaacat
    28561 gattaaaacc gccttacaag cagctcaaaa accttttttt gagtttgcac cgaacaatac
    28621 tctgcttgta ttcacaccag accaagacgg tggctggaga tacaaatcac accccgaatt
    28681 gatgcaaaac ccgtaccgca agtgcggcaa attcctcatg cacgataccg ccagtcttat
    28741 taagtttgta caaaaacaca aacaggacgg cacacaaatc tacattgatg ccgatttcaa
    28801 atcagggcgt attgatgtca ccgccgtcat caacggccat acgcaacaag ctcctggctg
    28861 gctcgatttt tatgccgtat acaccccgca acacactaca tcggcatcca actggctgaa
    28921 caacaatgcg caccgcatga atcagatgga gttttcccat ttcctgacca acaatgcccg
    28981 caacatcgta tccaaaaatc ccggtaacga aaattccgtt tacccgaccg ccgccgaagt
    29041 attggatttc gcgctcaatc tcgagtacac cgaaaaaacc accttcaaac aaggctatcg
    29101 tgaacaggac ggcagaatca actttacctt ccaatccgaa gactcagggc aaacagagaa
    29161 aaacctcaaa atgtttgaac gtttcggcat cgagttcacc ccgcatcaag gcggtgcatc
    29221 ctactttgtt gaagccctgt tgaaattccg catcgacaaa aacagcggcg cactcgtcct
    29281 gtggtacgaa ttgcagcaaa tcgatgctgt aatcgaacaa gcggcaaaag acatttccga
    29341 agccgtacaa aaagccttcc ctgaaatcga catctatttc ggcataatcg cctaaaaaaa
    29401 aaggtcgtct gaaattgtga accttcagac gatctccaca aaaacccaac tccgaaagac
    29461 cccaaaatga ccatcacaga agaatactcc atcgacatcc gcgtaaccgc agaacagggg
    29521 aaaaacgact acggctaccc caccgaacgc tacggatgcg acatcatcaa cacagacggg
    29581 gagctgcttg tcggcataga gccagagtac aaaaccccct ttgccgccgt cagaaaggcg
    29641 ctcatctgtc tggcaaaaga caacctcaaa aacgctgcct gatattaagc cgttaccccc
    29701 aataacgagg aatcaaaatg aaatacttga tccgcaccgc cttactcgca gtcgtagccg
    29761 ccggcatcta cgcctgccaa ccgcaatcag aagccgcagt gcaagtcaag gctgaaaaca
    29821 gcctgaccgc tatgcgctta gccgtcgccg acaaacaggc agagattgac gggttgaacg
    29881 cccaaatcga cgccgaaatc agacaacgcg aagccgaaga attgaaagac taccgatgga
    29941 tacacggcga cgcggaagtg ccggagctgg aaaaatgaac tttcaggaag aaaacgagaa
    30001 catcaagaat gacatagaga ttaatctctt gcattccgct gaagccgaca gcgtggaggc
    30061 aatgatggac ttggcggttt acgggctggc ggcgatggtt gccaaacaca acaaaacgcg
    30121 cggcgagcag cttgtgttac aggcgattgc cggtcatatg cggaagcttt tggccgcgct
    30181 tcccgaaacc gagtcattgg tgcagaccgg gaaggtttac cgccgacttg aagatttgat
    30241 ttttaaaacg tatttgccgg agcagtaaag atgaacacga atcaagatac gattccattt
    30301 ggcggcaacc ttgtgatttg ctgttcgacg ggaaacggcg gggacgggcg gttttcttgt
    30361 ctgattaccg atcagatacc ggatttaaat cttgtcagaa gcgggcaggc gttcccgatg
    30421 ttcatttatg agtacgaaac tagagaaaaa aggaaagcct gatggacacc ctattaaaaa
    30481 tcatcatcgc gctgtcattt tccggcgctg aggcattggc ggtatggctt ttcatcacgg
    30541 ccgccgatgc cgtattacgc cgcttcccga aaccgagtca ttacaggaga gtaaaaaaat
    30601 gaacatcaac gaactgggcg caaggataga ccgcccgacc atccgcgaac tgattgccta
    30661 cgcaacctgc cgcaaccgcc ccatttcaaa ctcgacactg ctgcgtatgg aaaaagacgg
    30721 acggataccg tgccgtctga aaaccccact cacatccccc gtatgggaca cccgcgaagt
    30781 tttggaagcc ctggggttac agcaataaaa aaacgcccga ttagggcgtt ttcacattca
    30841 gacggctttt gtattcccta ctgcatcaaa ccgacgacag gttgcggatt tcgggcagca
    30901 tcgggcggat ttttgccgcg tgttccgcgt cggcgtgtgc gtttaaggct tcgagggcgt
    30961 ttgcggcggc tttgaggcgg ctgcgtgttt ccgcccagac cgtccacatc gttaccgcct
    31021 gtttgcagcc gagctgcttc agcggcaggg aaacgtctct gcccatttgg atggcccacg
    31081 cgccgtatct gacggcaacg gcgaggtcgt acagggcgtt gccgctgatg ggcagggcag
    31141 gttgcggtgc gggtaacggt tcgcggtcga ggacttcgcc gtacagcacg ccgttttcaa
    31201 ctgccacgcg gctcatcacg cttaaaactt cggggaactg ttcggcaggt acttctttgt
    31261 agctgcatcc gaacttgctt ttgacggcag accaaagggt aatggcgata cgcgcctgcg
    31321 cttctttggg tgcggatttg gtcagggcgt tgtgcagttt tttgacggct tcgatttgtt
    31381 cgccggtcaa gccgtccgga agggcgcggg tgggtttggg ggtaactgtt tttatgccgt
    31441 ctgaaatttt gccgttaagt aaaatttcaa tctgctcatc gcaccaaacc gcaaatttcg
    31501 gattaagcca acgggcaaag tgaatagcga gtttgggatg cagccatgtg ccttgctcac
    31561 tgccaccacg cttcacgata actatttgat ttgcttccgt taggattttt ctcctaacgc
    31621 ttaaattctc agcaagtgca gagatatatt gttgagtttg ttcacttttt aggtagtctt
    31681 taggtaactt gccaaagtga gatgcaatgg cggttgcatt taaaaaaccg tcttgacgga
    31741 aagatacagg ggtgttacca aaattgagaa cagatacgtt catgatagtt tcctagttta
    31801 gtttcgaaag acccaaatgg gtggtcggga ggttcgaaaa cctactagaa aaggccggcg
    31861 ttattcccct tgcgggtatt gtattccgca ccctcccgac cataggaaac tagttcggat
    31921 atatcgaaac aaacaaccaa acaagaaaac ttatggacgt aaaaaattca cgctgacggg
    31981 gtgaatgccg ttctagtaga ggttttcgac gcctcgtgtt tcgtaatata tccaatcttt
    32041 ctattttctg caagcataaa aaagccgcca tgtggcggat agggtcgcgg tcttcaacag
    32101 catgtaggat ttaggaatgc ccaaattggg cgcaggggtg ttgaaaacac gcaaacagac
    32161 gcgccgccag ccttacgggt aggcgcaccc ccacatagga gtaaatcgat ttgatacgta
    32221 tagacgtaaa aaattccact ctatcgtgtt ggatatacgc tgtttgtcag gtgttttcaa
    32281 gcaccgtggg aaatattata tagagttatg gaaatgtgtc aagagaatta gcccaaatgg
    32341 gcggacgcgc ggttaagaac ccacatagga gggcggactt attccccttt cgggtcttgt
    32401 attcgtcgcc cacgcggtca tagaaacttc ctgctatcga aacaaacaac aaggaaagaa
    32461 aactatagac atgaaaaaat cacattgacg gagtgattgc cgctgtagtg tggtttctga
    32521 cgccacgaac aggaatataa aacaaaaccc ctgcacatgc aaggggtttc ccaaaaaacc
    32581 gtaggcggca aactgaaagg ccgtctgaat ttcagacggc ctatgttgcg gcggatgtta
    32641 agctattaag ctatttggtt ttcagaggct ttttcttcca ttttcgggct acggcttcaa
    32701 attcttgaaa ggccgtcggt gcgctcctga tacggcgtat ttcaaaaatg aagctgctta
    32761 ggttgtccca gtcacgtaac agcatggagt attcgaaatc tttatacatt ttctcgtgca
    32821 gtgctccgcc caatacgccc gcacagacaa attcgcgctg gtttaaaact gtcagtatgg
    32881 cttcacggtc tttcttcttg tccggggtat ccgatgtata ggtggcgagt atgcatccgt
    32941 ctgtttttgc cagcccgttt actatggtta tggcttcttg aagggcggca ttgttacgtt
    33001 cggccatgat catgtcgatg gtggcgcgct ttttggcgtt ttctgtattc ctcatgatgc
    33061 cgtaagcggc aacaaaaacg ccgataacag tcaatatcgg cgttgctatc tgtattaggt
    33121 tgtcagtcat tgccgtccca gccgtctgaa aggcggaaat cacggctttc cgaataaata
    33181 tgtcccattg tcatcccctt aagctgatgt tgaaaataaa tccttgcgtc ggaatatacg
    33241 gcattgcttg actattttca agattctgta cctcgtgaac cggactatac aaaaaaaccg
    33301 ccttcgtgta aagcggttct taaatcgccc gttaaggcgg acacaacgat agccaaactg
    33361 gaacaggagg cggcaaaggc gggtttgtcc aaaacagcct tgattgaaag gctgattggg
    33421 gatttgtagg cgtttgcaga tacgacaagg ggcgcattcc gcgccccatc acacgcacgg
    33481 acggcttgtc atcgcctgtc gcccgtgcgc ggctgcccat atttcagaac agtcttgcaa
    33541 gcccctttaa gggaacggtt ttattctagt acagtttgaa tgccttggca acggctgttt
    33601 taatcgcctg aaaatcctct tcactgatta ttggaatgca gcggtcgcgc cctttgggtt
    33661 tgtatcggtc taatcgtgcc aatccgactg ttgccgtcat gtcgcatttt gcccaacatt
    33721 ggatgtgcgg cttgtccggt aaggggtttc cactcatttt gtggtggtag tccgccaaag
    33781 ggacaggttc tgtgctgctt aagggtacga ccgttaccag tttgccgttg tgcctgtttc
    33841 gcgctatgac gacgacaggg cgtttcttga ccatttccgg ttcttcataa ccgcgaaagt
    33901 cgcacatgat aaccgaacgt tcccttggtt ggaattttaa aggcattagc cgctcctgac
    33961 gatgacaggc tgctattata gcagttctta cacaaaaaac cgccttcgtg taaagcggtt
    34021 gcaaaaaagc cttccaataa aaatgcggaa acggtttttt atttgcgttt ccgcataata
    34081 caaacacaca cacaaaaaaa tcattttccg tttttggcaa gcctcaaaac atcattcccc
    34141 caccgttcca gcgcatcctt acgctcctcc caaagctccg agcggttgta agccgtttgc
    34201 gtcctcgtcc ccaacgaatg ggcaagcagc ttttccgcca catcattatc caccttcaga
    34261 acctcgcgca aataagtacg cgcaagcaag cgcaaaccgt gcgccgtcgt atccagcccc
    34321 gcccgctgca tcgccacgcg cggactttcc ttattgatat gcccttgaaa attcacactt
    34381 tcaaacacaa accgcccgtt cacattcaac gcccgcgcct gatccaacac ccactgcatc
    34441 gcccgcgaca gcggcacatc atgcccccgc cgctcctttt tccgttcggc ggggatacgc
    34501 caaacctccc cgtccaactc cgaccactcc atcaacgccg cctcctgaat ccgcgtcatt
    34561 gtcaacagca gccaatagat acaaagccgc gttacaggat ggatacgcac cctgcccgca
    34621 taaaccgcaa attcattgcg ctgctccaaa aaatcaatca ggcgcggcaa ttcagacgga
    34681 ctcaacgccg ccatattccc cgttttcgcc cgttcaaaca cacccgaacc gatttgcgcg
    34741 acagggttga tttccatcat tcccgaaccg accgcaaacg caaacaccat cttcagactg
    34801 tttttcgttt tgcgcaacgt atcaacgata ccgcgcgcct ccatcacacg cagacagccg
    34861 accacatccg ccgtcctgac ttgacgaata tcaagattgc cgatagccgg aaaaacccac
    34921 cgctcaaaat tccgcataac ctgtccggca tacttttcag accgcccctt cgaccaacgc
    34981 acaaaccaat cacgcgccac cttctcaaaa gcaaaatccg cccgcacctt cttattgacg
    35041 acattttccc cgtgcgcccg ttttcggcgc acctcctccc gccattcccg cgcatcggcc
    35101 agcgaaaaat caggataccg ccccagcgaa attgtctgct gccttccatc ctgcacaaac
    35161 gacagcttcc aactccgccc gcccgtcggg tagacccaca aagccagccc gcccccgtcc
    35221 gacaacttat acagcttatc gcgcggcttc gcatttttaa cctgatttgc cgacagcggc
    35281 gtaatgattt tcgccattat ggtaatttcc catttatcca aaaattacca tacacattac
    35341 cataaaaaaa atgcaataag aagatgccgc aagattgcaa atgatttact ttgacgcgtt
    35401 ttgatagggc aaaccgatga tttttatatg gtaattgaca caacttgaac aaaaaagaac
    35461 cgccctgaat cagggcggtt ttgttttctg gcggaaacgg tgggattcga acccacggag
    35521 gatttgcacc ctcagcggat ttcgagtccg ctgcattcag cctctctgcc acgtttccga
    35581 taatgaagta aaaccaaata aaaatgccga tgctttatgc tacttcattt ttatttggtt
    35641 tttgacctca aggattggcg gaagcggtga gattcgaact cacggagggc tatcaaccct
    35701 cgacggtttt caagaccgtt gcattaaacc gctctgccac gcttccatct tcttgaagaa
    35761 gacgaataat aatgaagttt atacattttg ccaagcactt ttttcggaaa atacttaatt
    35821 tattgttttc actttatttg ttccgaacgc ataaacaccc attcactttc attggaagcc
    35881 gcgtcattga atgcgtagcc ttcgtaatta aaatttttca gcatttcagg atcggtaata
    35941 ttgtgttctg ccgcatagcg caccattaat ccgcgcgcgc gcttggcata gaaactgatg
    36001 attttatatt taccgttttt ttcgtcttta aatatcgggg taatcagccg cgcccgaagt
    36061 gttttcgtgt tgacggactt gaaatattcc tgtgaggcaa ggttgacaag cgtattgctg
    36121 cctgcttggg caagcgtgtc atttaaaagg ttggtaatga tgtctcccca aaactcatac
    36181 aaattcttcc cgcgcaaatt ggcaaatgcc gtccccattt ccaaacggta aggctgtatc
    36241 aggtccagtg gacgcagaag gccgtacagg ccggacagca ggcgtacgcg cccttgcaga
    36301 tattgtattt gatcggtatt caatgtgttt gcatccatac cttcgtaaac atcgccgttg
    36361 aacataaaga ccgcctgttt ggcgttttcc ggcgtaaacg gcgtgttcca ttctgcattg
    36421 cgctgcgcgt ttaagagggc aattttgtcg gaaacgtgca tcagttcggc aatctgttgc
    36481 ggcgcaagct cgcgcaactg ctgcattaga atgtcggact ctgccagcag gtcgggttgg
    36541 gtaaactcgc tgacaggggc agggtctttt tcattaaggt tcttcgcagg ggaaaggaca
    36601 aaaaacataa tctgctcggt attgtgtcaa acacggggat tttaagttta aacgtgtttg
    36661 cgggcaagcc gattaaaagt gaagtatagt ggattaaatt taaaccagta cagcgttgcc
    36721 tcgccttgcc gtactatctg tactgtcttc ggcttcgtcg ccttgtcctg atttttgtta
    36781 atccactata aataccgtta cagcaaattc aaccgtagaa tattgaaaaa tgccgtctga
    36841 acaaaagttc agacggcatt tccgattcct taccgataca gtgaaactat gtcttccgca
    36901 gctttgacac aagttgcgac atcggcaacc aaagcgatac ggacataacc ttccccggga
    36961 ttgccctgtt cggtatcccg tgccaaaaag cgtccgggta atacttggat agcggctttt
    37021 tgccataaat tgcgtgcaaa tgccaaatcg tcgccatcgg ggactttcaa ccagatgtaa
    37081 aacgaggcat ccggtaattt gacgtcaaat acctgttgca ggataggaat aacccattca
    37141 aacttttcct gatacaggcg gcggttgtca ataacgtgct gttcgtcatt ccaggcggca
    37201 atactggcac gctgtacggg aatgctcatt gcgctgccgt gataggttct gtaaagcaga
    37261 aaatttttaa gcagttcggc atcgccggcg acaaaaccgg aacgcaggcc tggaacattg
    37321 gaccgcttgg acaaactggt gaacataagc agtttttgcc tgcttcgccc caactgtgca
    37381 gcggcctgca ggcagcccaa aggcttgttg ccgtcgaaat agatttcgga atagcattcg
    37441 tccgaggcaa taatgaaacc atatttgtcc tgcaaatcaa aaacttcttt ccatccgtcc
    37501 aaatccagca cgctgccgct ggggttgttg ggcgagcaga cgaacaccag tttggtgcgt
    37561 ttccaaacct cttcggaaat actacgccaa tcggggttga aagacggcgc ggggcaattg
    37621 gcaaaatgga tttcaccgcc gcccaaaagt gtcgcacctt cataaatctg ataaaaggga
    37681 ttcgggctga cgattacggg tttgaggccg tctgaaacag ggttcaacac ggtttggaca
    37741 aaagaaaaca acgcctccct acttcccaaa accggcagaa tttcggtgtc ggaattcagc
    37801 gtcaacccat cataacggcg ttttaaccag ttcgcacacg cctgacgcag ttcaggcaaa
    37861 ccggccgtca gcggatattt ttccaactcg tgcaatgagg cggtcagcgc atccgtaatg
    37921 actttcggtg tcggatgttt cggttcgccg atatgcagtg ggacggcttc cagaccttcg
    37981 ggggcggaaa tgccctgcat cgcttcacgc agtcgggcaa agggataggg tttgagttgg
    38041 ttgagtaagg tattcatgat tttctccggt tgtcggtata tcggaagata tgccgtctga
    38101 acctgacgtg cccttcagac ggcattttat attcaatgca aacccgtact gccgaagccg
    38161 ccctcacccc ggctgcttcc gacaaattcc tcgacacgtt tgaaacgcgc ctgcacgatt
    38221 ggcacgacaa ccatctgcgc gatacgctca aacggtttga cagtaaacgg ttcgctgctt
    38281 ctgttccata acgacacctt caattcccct tgataatcgg agtcaatcaa accgaccaaa
    38341 ttgcccaaaa caatgccgtg tttatgcccc aagccggaac ggggcagcaa aacggcggca
    38401 tatgcgggat tcgccaaata aattgccaaa cccgtcggca caagaaacgt ttcacccggc
    38461 tgcaaaacga cttcctcatc caaacaggcg cgcaaatcta aacctgcaga acccttcgtt
    38521 gcatagacag ggacaacatc cgccatccgt tcgtccaata ctttcatttc tacttcaata
    38581 ttcatcgtct tgctcctgca tacggccggt ttcaaagatg ggagattata cacaagccgt
    38641 gtttacgctg aaacacagca aataggtttt gttttgaaat actccgtctg tgtataatgc
    38701 ccgaccttct tacatatcaa tattaatatg acacacataa gctcgccccg taacgaattt
    38761 atacgcggca tcaaagaaag ttcgcccatg ctgatcgggc ttttgccttg ggcattaata
    38821 ctcggtatgc agggtggaca aaaaggcatg agctggctgg aaatgttgtt gatgaccggt
    38881 atgaacttcg ccggcggctc cgagtttgcc acggtcaacc tgtgggcgga acctctgccg
    38941 atactgctta tcgccaccgt aacctttatg attaattctc ggcatatcct gatgggggcg
    39001 gcacttgccc cgcacctgaa agaaataccg ctgaaaaaag ccgtgcccgc actgtttttt
    39061 atgtgtgatg aaagctgggc gatggcattc tccgaaatcc aaaaacggaa agcagccggt
    39121 ttgcccgcat tcaatatgcc t
//
LOCUS       DAXHKG010000004        35812 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.004, whole genome shotgun sequence.
ACCESSION   DAXHKG010000004 DAXHKG010000000
VERSION     DAXHKG010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35812
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.004"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            82..1047
                     /locus_tag="ACFMWP_000159"
     CDS             82..1047
                     /locus_tag="ACFMWP_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5890828.1"
                     /translation="MLRLTALTLCTVLALGACSPKDSDSAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKRQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1065..1214
                     /locus_tag="ACFMWP_000160"
     CDS             1065..1214
                     /locus_tag="ACFMWP_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890829.1"
                     /translation="MPSETRMQTASCVSDGIARYGGFKQGFPLRRFGLPCLNLLRLNA
                     FPFCL"
     gene            1211..2179
                     /locus_tag="ACFMWP_000161"
     CDS             1211..2179
                     /locus_tag="ACFMWP_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC5890830.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFIGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            2169..3143
                     /locus_tag="ACFMWP_000162"
     CDS             2169..3143
                     /locus_tag="ACFMWP_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HFC5890831.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCILFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELAVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCIGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLRHKK"
     gene            3188..3814
                     /locus_tag="ACFMWP_000163"
     CDS             3188..3814
                     /locus_tag="ACFMWP_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HFC5890832.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGVGEINGTLTLRRKDNGKTVAVGLNAALQPFAPE
                     MRDIMPKAVSGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3897..4655
                     /locus_tag="ACFMWP_000164"
     CDS             3897..4655
                     /locus_tag="ACFMWP_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC5890833.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLADTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPNDIFTAANIKTLFDMDVDVLDYEGKKLVIHHI"
     gene            4959..6176
                     /locus_tag="ACFMWP_000165"
     CDS             4959..6176
                     /locus_tag="ACFMWP_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HFC5890834.1"
                     /translation="MKHFPSKVLTTAILATFCSGALAATNDDDVKKAATVAIAAAYNN
                     GQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQ
                     NVDAKVKAAESEIEKLTTKLADTDAALADTDAALDATTNALNKLGENITTFAEETKTN
                     IVKIDEKLEAVADTVDKHAEAFNDIADSLDETNTKADEAVKTANEAKQTAEETKQNVD
                     AKVKAAETAAGKAEAAAGTANTAADKAEAVAAKVTDIKADIATNKDNIAKKANSADVY
                     TREESDSKFVRIDGLNATTEKLDTRLASAEKSITEHGTRLNGLDRTVSDLRKETRQGL
                     AEQAALSGLFQPYNVGRFNVTAAVGGYKSESAVAIGTGFRFTENFAAKAGVAVGTSSG
                     SSAAYHVGVNYEW"
     gene            complement(6242..6580)
                     /locus_tag="ACFMWP_000166"
     CDS             complement(6242..6580)
                     /locus_tag="ACFMWP_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HFC5890835.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            6731..10693
                     /gene="purL"
                     /locus_tag="ACFMWP_000167"
     CDS             6731..10693
                     /gene="purL"
                     /locus_tag="ACFMWP_000167"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HFC5890836.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPGLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPIDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLHLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKALG
                     "
     gene            10788..11546
                     /gene="gloB"
                     /locus_tag="ACFMWP_000168"
     CDS             10788..11546
                     /gene="gloB"
                     /locus_tag="ACFMWP_000168"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HFC5890837.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            11860..16336
                     /locus_tag="ACFMWP_000169"
                     /pseudo
     CDS             11860..16336
                     /locus_tag="ACFMWP_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678286.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family peptidase"
     gene            16568..18022
                     /gene="mgtE"
                     /locus_tag="ACFMWP_000170"
     CDS             16568..18022
                     /gene="mgtE"
                     /locus_tag="ACFMWP_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HFC5890838.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(18108..19016)
                     /gene="hslO"
                     /locus_tag="ACFMWP_000171"
     CDS             complement(18108..19016)
                     /gene="hslO"
                     /locus_tag="ACFMWP_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HFC5890839.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENEWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIGEDESLVDLLGEGGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAGELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            19261..20016
                     /locus_tag="ACFMWP_000172"
     CDS             19261..20016
                     /locus_tag="ACFMWP_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC5890840.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            20035..20253
                     /locus_tag="ACFMWP_000173"
     CDS             20035..20253
                     /locus_tag="ACFMWP_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890841.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            20398..20742
                     /locus_tag="ACFMWP_000174"
     CDS             20398..20742
                     /locus_tag="ACFMWP_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HFC5890842.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPDSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            20742..21434
                     /locus_tag="ACFMWP_000175"
     CDS             20742..21434
                     /locus_tag="ACFMWP_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HFC5890843.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVIVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            21501..22721
                     /gene="argJ"
                     /locus_tag="ACFMWP_000176"
     CDS             21501..22721
                     /gene="argJ"
                     /locus_tag="ACFMWP_000176"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HFC5890844.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVVD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQSAATVYTCD
                     LSHGYVSINADYRS"
     gene            22781..24190
                     /locus_tag="ACFMWP_000177"
     CDS             22781..24190
                     /locus_tag="ACFMWP_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFC5890845.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGVSIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            24379..25770
                     /gene="hrpA"
                     /locus_tag="ACFMWP_000178"
     CDS             24379..25770
                     /gene="hrpA"
                     /locus_tag="ACFMWP_000178"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HFC5890846.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     VAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARHGEGDI
                     LVFLPGEREIRETAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAV"
     gene            25871..26998
                     /locus_tag="ACFMWP_000179"
     CDS             25871..26998
                     /locus_tag="ACFMWP_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HFC5890847.1"
                     /translation="MKHLLIDFENVQPQNLDKLPTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            27176..28753
                     /gene="lpt3"
                     /locus_tag="ACFMWP_000180"
     CDS             27176..28753
                     /gene="lpt3"
                     /locus_tag="ACFMWP_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HFC5890848.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKATRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEITEVGG
                     AGASMLDKLWLPALWGMLEVMLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQSAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTQLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            28855..32118
                     /locus_tag="ACFMWP_000181"
     CDS             28855..32118
                     /locus_tag="ACFMWP_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HFC5890849.1"
                     /translation="MDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRLSEIKQLTSSENQGDQDLSAKRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     EMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWV
                     ENPTSAATAKTVGFDNPTYATQQPTPSPAREGRGEGKTVAAQTNFSATAANPLPQERE
                     QSAAASAVSNDLHPANPQQTAPSPVGEGWGEGKTVATQTNFSATTANPLPNPLPQEGE
                     QSAAASAVSNDPQPQKQPAPQKDRLKPLPLADIRTFQAWLKTAERENPRLLFLSRDDL
                     MQHAAAHITEEQFPKFWQTADGKFELSYRFEPHHPLDGVTLTLPLTVLNRISPAALEW
                     LVPGMLREKIQLLIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTA
                     GDIRIFEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAIGRDLIQIQQQLGQAAAVTF
                     RDNTQEFERDNVTTWDIGILPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTIEAA
                     EQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAF
                     IGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNSKLGKHPLTHLL
                     RQRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQM
                     WQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKMWEDLN"
     gene            complement(32141..32563)
                     /locus_tag="ACFMWP_000182"
     CDS             complement(32141..32563)
                     /locus_tag="ACFMWP_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC5890850.1"
                     /translation="MTDIFTTSKRSFVMSKIHSKETKPEILVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNET
                     ELEKIGFKVIVVWECELKNKAIGRERLNRLVREIKDAV"
     gene            complement(32567..34213)
                     /locus_tag="ACFMWP_000183"
     CDS             complement(32567..34213)
                     /locus_tag="ACFMWP_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
                     /protein_id="HFC5890851.1"
                     /translation="MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATE
                     VEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLG
                     KLALFGLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVEPNTENGTTIT
                     LTELTKKQGYPLDNYVEHLSRLFDFPAQDFKIKVSLNGSEPKIIDGNLKYDLVTPQFE
                     WEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEF
                     FTDSESSHFYSYLTGWLSIDFIDNDDEDLIATDRTSLDWKHPKTSKLRVFLGEIVRAI
                     GQDWRKRRKKEKDDEVKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAE
                     VISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFENKVQKQTG
                     LHSIDGRELIEQAFGSKNSILLLTNNKTKAEQNLEDGLEQLACGTWTGFRNPVQHELR
                     ANLSPSIFNDKDALDLISLVSYLLRKVEQTKKRSKVVSSK"
     gene            complement(34227..35282)
                     /locus_tag="ACFMWP_000184"
     CDS             complement(34227..35282)
                     /locus_tag="ACFMWP_000184"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC5890852.1"
                     /translation="MKNSKLKAVDFFCGGGGMSYGMQSAGIQVLAGIDYEPSCKETYE
                     ANINAKFIQADVFELQPETLEKELGLKKNDDDLILIGCSPCQYWSVIQTDKRKSEKSK
                     SLLLEFQRFVEYFNPGYVVVENVPGILSRMKESRLDNFIKLLEEKGFTVHFGIHNTAD
                     YGIPQSRKRFTLIANRITKEKLEPVKYSGKRLTVRDVLGMENGFPKIIAGHQDETDFM
                     HSCAGLSDINLKRLALIPKNGGNRLAFAHIPELQLECFIGKDNSFKDTFGRLWWDKPA
                     PTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIGNAVP
                     PMYAEKIGRAIVDNIEC"
     gene            complement(35688..35812)
                     /locus_tag="ACFMWP_000185"
                     /pseudo
     CDS             complement(35688..35812)
                     /locus_tag="ACFMWP_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         8981 a        10640 c         8515 g         7676 t
ORIGIN      
        1 ttatcattta tcctttctag agccgttccg gtttgtccga ccggcggctt tgccccaata
       61 tccccatttt ggagacaccc tatgttgcgt ttgaccgcat tgaccctctg caccgtcctc
      121 gccttgggcg cgtgttcgcc gaaagattcc gactctgccc cacaagccaa agaacaggcg
      181 gtttccgccg cacaatccga aagcgcgtcc gttaccgtca aaaccgcgcg cggcgatgtt
      241 caaataccgc aaaaccccga acgtatcgcc gtttacgatt tgggtatgct cgacaccttg
      301 agcaaactgg gcgtgaaaac cggtttgtcc gtcgataaaa accgcctgcc gtatttagag
      361 gaatatttca aaacgaccaa acccgccgga actttgttcg agccggacta cgaaacgctc
      421 aatgcctaca agccgcagct catcatcatc ggcagccgcg ccgccaaggc gtttgacaaa
      481 ttgaacgaaa tcgcgccgac catcgaaatg accgctgata ccgccaacct caaagaaagt
      541 gccaaagagc gtatcgacgc gctggcgcaa atcttcggca aacaggcgga agccgacaag
      601 ctgaaggcgg aaatcgacgc gtcttttgaa gccgcgaaaa ctgccgcgca aggcaaaggc
      661 aaaggtttgg tgattttggt caacggcggc aagatgtccg ccttcggccc gtcttcacga
      721 ctgggcggct ggctgcacaa agacatcggc gttcccgctg ttgacgaagc catcaaagaa
      781 ggcagccacg gtcagcctat cagctttgaa tacctgaaag agaaaaatcc cgactggctg
      841 tttgtccttg accgcagcgc ggccatcggc gaagagggtc aggcggcgaa agacgtgttg
      901 aataatccgc tggttgccga aacaaccgcc tggaaaaaaa gacaagtcgt ttacctcgtt
      961 cctgaaactt atttggcggc cggcggcgcg caagagctgc tgaatgcaag caaacaggtt
     1021 gcggatgctt ttaacgccgc gaaataatga aacggcggca ttcgatgccg tctgaaacac
     1081 ggatgcaaac cgcttcctgt gtttcagacg gcattgcccg atacggaggc ttcaaacaag
     1141 gctttccgct ccgacggttc ggactgcctt gtttgaatct tctacgcctt aacgcttttc
     1201 ccttctgttt atgactgcca aacctttttc cctcaacctg accaacctcc tgctgctggc
     1261 ggtattgttt gccgtcagcc tgtcggtggg cgttgccgat ttccgctggt cggatgtgtt
     1321 ttcgctatcc gacagccagc aggtcatgtt catcagccgc ctgccgcgca cgtttgcgat
     1381 tgtgctgacg ggcgcgtcta tggcggtggc gggcatgatt atgcagattc tgatgcgtaa
     1441 ccgttttgtc gagccttcta tggcgggtgc gggtcagagt gcggctttgg gtttgcttct
     1501 gatgtccctg ctgctgcctg ccgcgccgct gccggtcaaa atgtcggttg ccgccgttgc
     1561 cgcgctaatc gggatgctgg tgtttatgct gctgatccgc cgcctgccgc cgacggcgca
     1621 actgatggtg ccgctggtgg ggattatttt cggcggcgtg gttgaggcgg tggcgacgtt
     1681 tatcgcgtat gaaaacgaaa tgctgcaaat gctcggcgtg tggcagcagg gcgatttttc
     1741 gagcgtgctg ctggggcggt acgagctgct ttggattacg ggcggtttgg cggtgtttgc
     1801 ctatctgatt gccgaccggc tgacgatttt ggggctgggc gagacggtca gcgtgaattt
     1861 gggtttgaac cggacggcgg tgttgtggtc ggggctgatt attgtagcac tgattacatc
     1921 gctggtcatt gtaacggtcg gcaatattcc gtttatcggg ctggtcgtgc cgaacatcat
     1981 cagccgcctg ataggcgaca ggctgcgcca aagcctgcct gcggtggcct tgttgggcgc
     2041 gtctttggtt ttattgtgcg acattatcgg acgcgtgatt gtgtttccgt ttgaaattcc
     2101 ggtctctacg gtttttggtg tgttgggtac ggctttgttt ttgtggcttt tgttaaggaa
     2161 acctgctcat gccgtctgaa aaaaatatcg gttttatggc aggaagcagc cgtccgttgt
     2221 gggttgcctt tgcgctgttg ctggtttcct gcatcctgtt tatgacgctc aacgtcaaag
     2281 gcgattggga ctttgtactg cacctgcgtc tgaccaaact tgccgcgctg ctgatggtcg
     2341 cctatgcggt cggcgtgtcc acgcaactct tccaaacgct gaccaacaat ccgattctga
     2401 ccccttcaat tttgggtttc gattcgctgt atgtgttttt gcagaccttg ctggtgttta
     2461 cgttcggcgg cgtgggctat gcttccctgc cgttgacggg caaattcggc tttgaacttg
     2521 ccgttatgat gggcggctcg ctgctgctgt tttacacgct catccgtcag ggcggacgcg
     2581 atttgccgcg tatgatttta atcggcgtga ttttcgggat tttgttccgc agcctgtcgt
     2641 cgctgctttc gcgcatgatc gaccccgaag aatttacggc ggcgcaggcg aatatgtttg
     2701 ccggattcaa taccgtccac agcgagcttt tgggcatagg cgcgctgatt ctgctcgtca
     2761 gcgcggcggt cgtttggcgc gaacgctacc gcttggacgt acaccttttg gggcgcgacc
     2821 aagccgtcaa tttgggcatc agctacacgc gcaacacctt gtggatactg ctttggattg
     2881 ccgcattggt ggcgacggcg accgccgtgg tcggcccggt aagctttttc gggcttctcg
     2941 ccgcctcgct tgccaaccac ttttccccgt ccgtgcgcca ttccgtccgc ctgccgatga
     3001 cggtttgtat cggcggtatc ctcttggtcg gcggacagac cgtattcgaa cacttcttgg
     3061 gcatgaaggc ggtattaagc gtggtggtcg aatttgcggg cggactcgtt ttcctctatc
     3121 tcgttttaag acacaaaaaa tgacggatgc catctgaacg gcagcccgcc ccgaaaggac
     3181 aaaccatatg acgcaagaac gtttacccga atttttcgac cgcgccccga cgctgaccgt
     3241 acaagacccg cttgccgcat tcctcggcgc ggccgaaaac ggcatcctca cttaccgcta
     3301 cgccgatgcc gtgcgcctgt gcggacattc ctgcccgacc gtcgcgggcg cgtacctgat
     3361 ggttatcaaa ggtctgaaag ccctttacgg agaagagctg cccgaacgcg gcggcatcga
     3421 agccgccatg cagggagcgc gcgacgaagg cacggtcggc gtaaccgcgt ccgtcgtcca
     3481 acttctcacc ggcgcagccc ccgaaaccgg cttcggaggc atcggaatgc agggacgctt
     3541 cgcccgccgc aacctcttat cctttggtgt aggcgaaatc aacggcacac tgaccctgcg
     3601 ccgcaaagac aacggcaaaa ccgtcgccgt cggcctcaac gccgccctgc aacccttcgc
     3661 acccgaaatg cgcgacatca tgcccaaagc cgtcagcggc agcgcaagcg cagaagaact
     3721 cgaacgcttc ggacaactct ggcaggcacg cgttaaagca tttttaaccg aatcggcgga
     3781 cgacccgcag ttcgtcatcg tccgcgaagt gtgagcgttc agacggcatt ccgaatttca
     3841 aatgccgtct gaaccccgcc aaacaacaac aaacctacgc ccgacaagca tccgccatga
     3901 ttaccatccg caacgtcagc taccgcatcg gcacacgccc catcctcgac aacgtcagcc
     3961 tcgacatccc cgaaggcggc attaccgccc tcgtcggccc caacggtgcg ggcaaatcca
     4021 ccctgttttc ctttatggcg cggctgcgac cgcttgaaag cggcagcatc gcctaccgag
     4081 gcaaaaatct tgccgatacc cccaccgccg aactcgccaa aaccctgtcc atcctcaccc
     4141 aagaaaacag catcatgagc cgcatcaccg tgcgcgacct gctgatgttc ggccgttacc
     4201 cctaccatca aggcagaccg actgccgaat gccgccgtat cgttaacggt gcaatcgaag
     4261 aattccacct gcaagacctc tccgaccgct acctgaccga gctttccggc ggccaacgcc
     4321 aacgcgccat gattgcgatg gtgttctgcc aaagcaccga ctacgtcctt ttggacgaac
     4381 cgctgaacaa cctcgatatg tatcacgccc gctcgctcat gcaaatcctg cgccggctga
     4441 ccgacgaaca caagcgcacc accgtcgtcg tattgcacga catcaaccag gcagcagcct
     4501 acgccgacca cgtcgtcgcc atgaaaaacg gccaagtcgc catgcagggc aaacccaacg
     4561 atattttcac cgccgcaaac atcaaaaccc tattcgatat ggacgtcgac gtcctcgatt
     4621 acgaaggcaa aaaattggtt atccaccata tctaaatccg acaaaaaggc cgtctgaaca
     4681 ttcagacggc aacccatatc ctgacaaaat taagacacga caccggcaga attgacatca
     4741 gcataatatg cacatattaa cagatattaa tgccgaacta cctaactgca agaattaaat
     4801 aaataaataa ataaataaat aaataaataa attgcgacaa tgtattgtat atatgcctcc
     4861 tttcatatat actttaatat gtaaacaaac ttggtgggga taaaatactt acaaaagatt
     4921 tccgccccat tttttatcca ctcacaaagg taatgagcat gaaacacttt ccatccaaag
     4981 tactgaccac agccatcctt gccactttct gtagcggcgc actggcagcc acaaacgacg
     5041 acgatgttaa aaaagctgcc actgtggcca ttgctgctgc ctacaacaat ggccaagaaa
     5101 tcaacggttt caaagctgga gagaccatct acgacattga tgaagacggc acaattacca
     5161 aaaaagacgc aactgcagcc gatgttgaag ccgacgactt taaaggtctg ggtctgaaaa
     5221 aagtcgtgac taacctgacc aaaaccgtca atgaaaacaa acaaaacgtc gatgccaaag
     5281 taaaagctgc agaatctgaa atagaaaagt taacaaccaa gttagcagac actgatgccg
     5341 ctttagcaga tactgatgcc gctctggatg caaccaccaa cgccttgaat aaattgggag
     5401 aaaatataac gacatttgct gaagagacta agacaaatat cgtaaaaatt gatgaaaaat
     5461 tagaagccgt ggctgatacc gtcgacaagc atgccgaagc attcaacgat atcgccgatt
     5521 cattggatga aaccaacact aaggcagacg aagccgtcaa aaccgccaat gaagccaaac
     5581 agacggccga agaaaccaaa caaaacgtcg atgccaaagt aaaagctgca gaaactgcag
     5641 caggcaaagc cgaagctgcc gctggcacag ctaatactgc agccgacaag gccgaagctg
     5701 tcgctgcaaa agttaccgac atcaaagctg atatcgctac gaacaaagat aatattgcta
     5761 aaaaagcaaa cagtgccgac gtgtacacca gagaagagtc tgacagcaaa tttgtcagaa
     5821 ttgatggtct gaacgctact accgaaaaat tggacacacg cttggcttct gccgaaaaat
     5881 ccattaccga acacggtacg cgcctgaacg gtttggatag aacagtgtca gacctgcgta
     5941 aagaaacccg ccaaggcctt gcagaacaag ccgcgctctc cggtctgttc caaccttaca
     6001 acgtgggtcg gttcaatgta acggctgcag tcggcggcta caaatccgaa tcggcagtcg
     6061 ccatcggtac cggcttccgc tttaccgaaa actttgccgc caaagcaggc gtggcagtcg
     6121 gcacttcgtc cggttcttcc gcagcctacc atgtcggcgt caattacgag tggtaagcag
     6181 catctcccga taaagaaacc gcagccctgc aaggctgcgg tttttatttt ctatccggcc
     6241 gtcaaaccgc cgcgtccgaa cgttcgcccg tgcggatacg gattgcctcc tcgaccggca
     6301 gcacaaaaat cttgccgtcg ccgatttttc ccgaacgcgc cacctcgaca atcacgtcaa
     6361 tcgcgcgttc cacagcatca tccgccaaca ccagctcgat tttgaccttg ggcaggaaat
     6421 cgacagcgta ttccgcgccc cggtaaatct ccgtatgccc cttctgcctg ccgaaccctt
     6481 tgacctcgct gacggtcata cccgtaatgc cgatttccgt caacgcctcg cgcacgtcgt
     6541 cgagtttgaa cggtttgaca atcgcctcga tttttttcat aaaatttcct ttgaacaaac
     6601 aatacaaaca catccgaaaa acgggaacct cccgtcagat tgtcaacatt ttaagccaaa
     6661 atacccaagc aatacagccc cgttgcgcgt ataatgacag attttccaac cgcatttgag
     6721 agccgaatcc atgtctgtcg ttttgccctt gcgcggcgtt accgcccttt ccgatttccg
     6781 tgtcgaaaaa ctcttgcaaa aagccgccgc actcggactg cccgaagtca aattaagcag
     6841 cgaattttgg tatttcgccg gcagcgagaa agcattggat gccgcgactg tcgaaaaact
     6901 gcaagccttg ttggcggcgc aaagcgttga acaaacgcca aaagcgcgcg agggcttgca
     6961 tttgtttttg gtaacgcccc gtttgggtac gatttcgccg tgggcttcca aggcgaccaa
     7021 tatcgcggaa aactgcggtt tggcaggcat cgagcgcatc gagcgcggca tggcggtgtg
     7081 gctggaaggt gcgcttaccg atgaacagaa acagcaatgg gcggcgttgc tgcacgaccg
     7141 catgaccgaa tccgtgctgc ccgattttca gacggcatcc aaattattcc accatctcga
     7201 atccgaaacc ttttccaccg ttgatgtttt aggcggcggt aaagaggctt tggtcaaagc
     7261 caataccgaa atgggtttgg cactctccgc cgacgaaatc gattatctgg ttgaaaacta
     7321 tcaggctttg caacgcaatc cgtccgatgt ggagctgatg atgttcgcgc aggcaaacag
     7381 cgaacactgc cgccacaaaa tcttcaacgc cgacttcatc ctcaacggcg aaaaacaacc
     7441 gaaatccctt ttcggcatga tacgcgacac gcacaacgcg catcccgaag gcacggtcgt
     7501 cgcttataaa gacaattcgt ccgtgatcga aggcgcgaaa atcgagcgtt tctatccgaa
     7561 tgcggcggaa aaccaaggct accgtttcca cgaggaagac acgcatatca tcatgaaagt
     7621 ggaaacgcac aaccacccga ccgccatcgc gccgtttgca ggcgcggcaa cgggcgcggg
     7681 cggcgaaatc cgcgacgaag gcgcaacggg caaaggttcg cgtccgaaag caggcttgac
     7741 cggctttacc gtgtccaacc tcaacatccc cggcctcaaa cagccgtggg aacaagatta
     7801 cggcaagccg gaacatattt cctcgccgct ggacatcatg attgaaggcc cgatcggcgg
     7861 cgcggcgttc aacaacgaat tcggccgccc caacctcttg ggctacttcc gcacttttga
     7921 agaaaaattt gacggtcagg ttcgcggcta ccacaaaccg attatgattg ccggcggctt
     7981 gggcagcatt caggcgcagc agacgcataa agacgaaatc cccgaaggcg cgttgctgat
     8041 ccaactgggc ggcccgggca tgcttatcgg cttgggcggc ggcgcggctt cttcgatgga
     8101 taccggcacg aacgacgctt ctttagactt caactccgta caacgcggca accccgaaat
     8161 cgaacgccgc gcgcaggaag tcatcgaccg ctgctggcag ctcggcgaca aaaacccgat
     8221 tatctccatc cacgacgtgg gcgcaggagg tttgtccaac gccttccccg aactggtcaa
     8281 cgatgccgga cgcggcgcgg tattcgagct gcgcgaagtg ccgttggaag aacacggttt
     8341 aacgcctttg caaatctggt gcaacgaatc gcaagagcgt tatgtgttgt cgattttgga
     8401 aaaagatttg gataccttcc gcgccatctg cgaacgcgaa cgctgcccgt ttgccgtggt
     8461 cggtacagcg accgacgacg gtcatttgaa agtgcgcgac gatttgttcg ccaacaaccc
     8521 catcgatttg ccgttgaacg tcttgctcgg caaaccgccc aaaaccacgc gtaccgacaa
     8581 aacagttacg ccatctaaaa aaccgtttca cgccgacgat atcgacatca ccgaagccgc
     8641 ctaccgcgtt ttgcacctgc ctgccgtagc cgccaaaaac ttcctgatta ccatcggcga
     8701 ccgcagcgtc ggcggcatga cccaccgcga ccaaatggtc ggcaaatacc aaacccccgt
     8761 agccgactgc gccgttacca tgatgggctt caatacctat cgcggcgaag caatgtctat
     8821 gggcgaaaaa ccgaccgtcg ccctgtttga cgcgcctgct tcgggcagaa tgtgcgtcgg
     8881 cgaagccatc accaacatcg cggcggtcaa catcggcgac atcggcaaca tcaagctctc
     8941 cgccaactgg atggcggcgt gcggcaacga aggcgaagac gaaaaactct accgcaccgt
     9001 cgaagcggtt tccaaagcct gtcaggcatt ggatttgagc attcccgtgg gcaaagacag
     9061 cctgtcgatg aaaaccgtat ggcaggatgg cgaagagaaa aaatccgtcg tttcgccgtt
     9121 gagcctgatt atctccgcgt tcgcgccggt tcaagacgta cgcaaaaccg ttacgcccga
     9181 attgaaaaac gtcgaggaca gcgtattgct gtttgtcgat ttgggcttcg gcaaagcgcg
     9241 tatgggcggc tctgcattcg gtcaggtata caacaacatg agcggcgacg cgcccgattt
     9301 ggacgacaca ggccgtctga aagcgtttta caacgtgatt caacagcttg tcgccgaaga
     9361 caaactcttg gcataccacg accgcagcga cggcggcttg tttgccgttt tggtagaaat
     9421 ggcgtttgca gggcggtgcg gcttggatat agatttaaat ttattgcttg cacaaacatt
     9481 tattaccaac cataccgctc tgtctcaatc attgcggact gaagaggtaa aagcgttggc
     9541 tgaatggcaa gaaaccattg cccgcacatt atttaatgaa gagttgggtg ctgttatcca
     9601 agttagaaaa caagatgttg ccgatattat caatttattc tatcaacaac agctgcatca
     9661 taatgtcttt gaaatcggta cgttaactga tgagaacacg ttaatcatcc gcgacgggca
     9721 aacgcacctt atttctgaca acctaatcaa actgcaacaa acctggcaag aaaccagcca
     9781 tcaaatccaa cgcctgcgcg acaaccctgc ctgcgccgac agcgagtttg ccctgattgg
     9841 cgacaacgac cgcagcgcat tgtttgccaa cctgaaattc gacgtgaacg aagacatcgc
     9901 cgcgccgttt atcaacagcg gcgcgaaacc caaaatcgcc atcctgcgcg aacagggcgt
     9961 gaacgggcaa atcgaaatgg ccgccgcctt cacccgcgcc ggattcgatg cttacgacgt
    10021 gcatatgtcc gacctgatgg caggccgctt ccgccttgcc gacttcaaaa tgctggcggc
    10081 gtgcggcggc ttcagctacg gcgacgtact cggcgcgggc gaaggctggg cgaaatccat
    10141 cctgttccac cctgccttgc gcgaccaatt tgccgccttc tttgccgatc cggacacgct
    10201 gacattgggc gtgtgcaacg gctgccagat ggtcagcaac ctcgccgaga ttatcccggg
    10261 tgcagaggca tggcctaaat tcaaacgcaa cctgagcgaa cagtttgaag cacgcctgag
    10321 catggttcac gttccgaaat cagcgtcgct gattctgaac gaaatgcaag gctccagcct
    10381 gcctgtcgtg gtcagccacg gcgaaggccg cgccgacttc gcgcttcacg gcggcaatat
    10441 ttccgccgat ttgggcatcg cgctgcaata tgtggacggt caaaaccaag tgacccaaac
    10501 ctacccgctc aaccccaacg gctcgccgca aggcatcgcc ggcgttacca acgccgacgg
    10561 ccgcgtgacc atcatgatgc cgcatccgga acgcgtgtac cgtgccgcac aaatgagctg
    10621 gaaaccagaa gactggacgg aattgtccgg ctggtaccgc ctctttgccg gcgcacgtaa
    10681 agccttgggc taaccgccct actcaaacca atgccgtctg aagaatattt cagacggcgt
    10741 tccggcatac catcctttaa acggtatccg tccaccgagg aacactcatg aaaatcaccc
    10801 ccgtcaaagc cctaaccgac aactacatct ggatgataca gcacggcaac catgccgtct
    10861 gcgtcgaccc ttccgaaccc tcgcccgtct tggaattcct cgtccgcaac cgcctcatgc
    10921 ttgcccaaac atgggtaact cacccccacc ccgaccacga gggcggtgcg gcggcactct
    10981 ggcgcggcta catggaatcg cccgtttacg gcgaatccga catcgaagca gcaacccaca
    11041 ccgtaaccgc cggcacccaa ttcaccttcg gcgacggaca ggttaccgtt tgggcaacac
    11101 ccggccacac agaccgccac accagctacc ttctcgaaac ttcagacggc atacacgttt
    11161 tctgcggcga caccctgttt tccgccggct gcggacgcgt gtttaccggc acaatcgaac
    11221 agctttacga cagcttccaa cgcttcaacc gcctgcctga aaacaccctg ttctacccgg
    11281 cacacgaata caccgccgcc aacctggatt ttgccgccca tatcgagccg gacaacgccg
    11341 acattcagac ggcactgaaa gcggcggcgc atacgcctac cctgcccgtt accctcgcgc
    11401 acgaacgccg cgtcaatccg tttttgcgcg tcgacctgcc gcacgtcaga gaccgcgccg
    11461 aggcattgag cgggaaaacg ttaaacagca gcctcgatac ctttgtcgcg ctgcgtgaac
    11521 ttaaaaacca ataccggacg aaataaaaca acgggaaaac gcagccattc ctaggatttt
    11581 tattaaaatc ttaaataaaa tcatacaatc atcgccaata gacgaaagga caccgttgcc
    11641 ttataatcaa acaaaaacaa aatatataat atagtggatt gaatttaaat caggacaagg
    11701 cgacgaagcc gcagatagta cggcaaggcg aggcaacgct gtactggttt ttgttaatcc
    11761 actatattgt taatccacta tataaatcca gcacaaaacg ggatcggtga ttcttgtccg
    11821 caagaatcgt tgattttctc tattacacgg ataatcatca tgcgcttcac acacaccacc
    11881 ccattttgtt ccgtattgtc caccctcggt ctttttgccg tttcccctgc ttactcatcc
    11941 attgtccgca acgatgtcga ttaccaatat tttcgcgact ttgccgaaaa taaaggcgcg
    12001 ttcgccgtag gtgcaagcaa tatttccatc caagacaagc aaggcaaaat attaggcagg
    12061 gttctcaacg gcatccccat gcccgacttc cgagtcagca accggcaaac cgccatcgcc
    12121 accctgattc acccccaata cgtcaacagt gtcaaacaca acgtcggcta cggttccata
    12181 caattcggca acgacaccca aaatccagaa gaacaagcct atacctaccg cctcgtatca
    12241 cgcaacccgc acccggacta cgactaccac cttccccgcc tcaacaaact ggttaccgaa
    12301 atctcacctg ccgcactcag cagcgtaccc ttgcttggaa acggccagcc aaaggccaat
    12361 gcctacctcg ataccgaccg cttcccctac tttgtacgac tcggctcagg cacgcaacaa
    12421 gtccgcaaag cagacggcac gcgtacacga accgccccgg cataccaata cctgaccggc
    12481 ggcacgccgc tgaaagtatt ggggttccaa aaccacggct tactcgtcgg cggcagcctg
    12541 accgaccaac cccttaacac ctacgcaatc gccggagaca gcggttcccc cctgtttgcc
    12601 ttcgacaagc atgaaaaccg ctgggtgctt gcgggcgtac tcagcaccta cgccggcttc
    12661 gataatttct tcaacaaata catcgtcacg caacccgaat tcatccgttc caccatccgc
    12721 caatacgaaa cccggctgga tgtcgggctg accaccaacg aactcatatg gcgcgacaac
    12781 ggtaatggcg acagcaccct gcaagggctc aacgaacgca tcaccctgcc cattgcaaac
    12841 ccttcgcttg ccccacaaaa cgacagcagg cacatgccgt ctgaagatgc cggcaaaacg
    12901 ctcatcctat ccagcaggtt cgacaacaaa acactgatgc tggcagacaa tatcaaccaa
    12961 ggcgcaggcg cattgcagtt cgacagcaac ttcaccgtcg tcggtaaaaa ccacacatgg
    13021 caaggtgcag gcgttatcgt agccgacggc aaacgcgtct tctggcaagt cagcaacccc
    13081 aaaggcgacc ggctctccaa actgggcgca ggcacgctta tcgccaacgg acaaggcatc
    13141 aaccagggcg acatcagcat cggggaaggc actgtcgtac tcgcccaaaa agctgcttca
    13201 gacggcagca aacaagcatt caaccaagtc ggcatcacca gcggcagggg tacggccgtc
    13261 ctcgccgaca gccagcaaat caaatccgaa aacctctatt tcggcttcag gggcggacgg
    13321 ctcgacctca acggcaacaa ccttgccttt acccatatcc gccatgcgga cggcggcgcg
    13381 cagatcgtca accacaaccc tgaccaagcc gcgacactga cgctgaccgg caaccccgtc
    13441 ctcagtcctg agcatgtcga gtgggtgcaa tggggcaacc gtccgcaagg caacgcggcg
    13501 gtttacgaat acatcaaccc gcaccgcaac cgtcggaccg actacttcat actcaaaccc
    13561 ggcggcaacc cgcgcgaatt tttcccgtta aatatggaaa actcaacaag ctggcaattt
    13621 atcggcaaca acaggcaaca ggccgccaaa caagtcgccc aagccgaaaa tgcccgcccc
    13681 gacctaatta ccttcggcgg atacttgggt gagaacgcgc aaacgggcaa agccgcaccg
    13741 agttacagca aaaccaatat cgaatgggtg aatggtccaa acaccccaca caagccctcg
    13801 ccctatacga atacgccaac ccgcacaggg gcaggcgtac cgacgattac cgcctcaaag
    13861 aaggcggcaa ccccggcgcc tacttcccat ggaatgccta cagcacccaa gactgggaat
    13921 ttctcggaca tgaccggcga agcagccata gaaaaaaacc gccatatcgc aaatgccgcc
    13981 gtatacggcc ggcccgaata ccgttacaac ggcgcactca acctgcacta tcgtcccaaa
    14041 cgcaccgaca gcacgctgtt gctcaacggc ggcatgaacc ttaacgggga agtcttgatt
    14101 gagggcggca atatgattgt gtcaggcagg cccgtacccc atgcctacga ccaccaggcc
    14161 aaacgcgaac ccgttcttga aaacgaatgg accgacggca gcttcaaggc tgcacggttc
    14221 accctacgaa accatgcccg actgacagca gggcgcaata ccgcgcatct ggacggcgac
    14281 ataaccgcat acaatctgtc cggcatcgac ctcggcttta tccaaggcaa aacaccggaa
    14341 tgctaccgct cctaccatag cggcagcacc cactgcacac ccaacgccgt tttaaaagcc
    14401 gaaaactatc gtgcactacc tgtaacgcaa gtacgcggcg acattaccct taacgaccgt
    14461 tcagagctcc gcctgggcaa agcacacctg tacggcagca tccgtgccgg caaagacacc
    14521 gcagtccgca tggaagcaga cagcaactgg acactttccc agtccagcca caccggcgca
    14581 ctgacgcttg acggcgcaca aattaccctg aaccccgatt tcgccaataa tacacacaac
    14641 aaccgcttca acacactgac cgtcaacggc acacttgacg ggttcggcac attccgattc
    14701 ctgaccggca tcgtccgaaa acaaaatgcc cccccccctc aaactggaag gggacagccg
    14761 cggcgcattc caaatccacg tcaaaaacac cggacaagaa cctcaaacaa ccgaatcgct
    14821 tgcacttgtg agcctcaatc cgaaacacag ccaccaagcc cgattcaccc tccaaaacgg
    14881 ctatgccgat ttgggtgcct accgctacat cctccgcaaa aacaacaacg gatacagcct
    14941 gtacaacccg ctcaaagagg ccgaacttca aattgaagcc acgcgtgcgg aacatgagcg
    15001 caaccaacag gcatacaacc aattacaggc aaccgacatc agcagacagg ttcaacatga
    15061 ctctgacgcg accaggtagg cactacaggc ctggcagaac agtcaaaccg aacttgcccg
    15121 catcgacagc caagtccaat atctgtccgc ccaattgaaa cagacagacc cgctgaccgg
    15181 cattctgacg cgtgcccaaa acctgtgtgc cgcacaagga tacagtgtcg atatctgccg
    15241 tcaggttgcc aaagccgccg acacgaacga cctgacactc ttcgaaaccg aactggatac
    15301 gtatatagaa cgtgtagaaa tggccgaatc cgaacttgac aaagcacggc aaggcggcga
    15361 tgcgcaagcc gtcgaaacag cccggcacgc ctacctgaac gcactcaacc gtctgtcccg
    15421 acaaatccac agtttgaaaa ccggcgttgc cggcatccgt atgccgaacc tggccgaact
    15481 gatcagccgg tcggccaaca ccgccgtttc cgaacaggcc gcctacaata ccggccggca
    15541 acaggcggga cgccgcatcg accgccacct taccgatccg cagcagcaaa acatctggct
    15601 ggaaaccggt acgcaacaaa ccgactacca tagcggcaca caccgtccct accaacaaac
    15661 taccaactat gcacatatcg gcatccaaac cggcatcacc gaccgtctca gtgtcggtac
    15721 gattttaacc gatgagcgca caaacaaccg ttttgatgaa ggcgtatccg cccgaaaccg
    15781 cagcaacggc gcacatctgt tcgtcaaagg ggaaaacggc gcactctttg ccgcggcaga
    15841 tttaggctac agcaacagcc gtacccgatt taccgattat gacggggctg ccgtccgccg
    15901 ccacgcatgg gatgcaggca tcaacaccgg catcaaaatc gataccggca tcaacctcag
    15961 accctatgcc ggcatccgta taaaccgcag caacggcaac cggtacgtac tcgacggcgc
    16021 agagataaac agcccggcgc aaatccaaac cacatggcat gccggcatcc gtctcgataa
    16081 aaccgtcgaa ctgggtcaag ccaagctgac ccccgctttc agcagcgatt actaccatac
    16141 ccgccaaaac agcggttccg ccctcagcgt caacgaccgt accttactgc agcaagccgc
    16201 ccacggcaca ctgcataccc tgcaaatcga cgccggatac aaaggctgga acgccaaact
    16261 tcatgccgct tacggcaaag acagcaacac cgcccgccac aaacaggcag gaatcaaaat
    16321 aggctacaac tggtaacaag ccgataaaaa tgccgtctgg aacccgcgtt tcagacggca
    16381 tttgcgttaa aaatagtaaa ccgttccaaa agggagtaga atagtgccgt ttccaaccct
    16441 gcgcctgtac cgtcaggctt ttattatgga ccttcccagt tcgtttttac tgaacgcccc
    16501 ttccgattcc aaacgacaat aaccatcccg ccggaatgcc tccccgcaca cgacgggcgg
    16561 agcatttatg agcatcgaac acactcctcc gacacacgac ggcgaaaccg gtcaaaacca
    16621 tgccgaacgc ccttccgctg atttcgaccg tgtccactcc ctctgcgaaa tcctcgaacc
    16681 tgcctttgaa caaatcgaaa acggcacacc gctcgaagac gcgccgctgc gcgacaagct
    16741 gaccgagctg accgtcctct tgagcgagct gcaccctgcc gacgtggcgg cagtgttgga
    16801 atcgctgccg ccgcgcgaac gcaatatcgt ctggattctg gtcaaaccgg aagacgacgg
    16861 cgaagtcttg ctggaagtgt ccgatgcggt gcgcgaaacg ctgatcgagt cgatggacaa
    16921 agacgaattg ttggcggcgg tcgatgattt ggacgcggac gaattggcgg agctggcaga
    16981 cgatttgccg caccaagtgg tttatgaagc cttgcagacg cgcgacgagg aagagcgcgc
    17041 acaagtcaaa gcggcaatgt cctacgaaga caaccaagtc ggtgcgatta tggacttcga
    17101 gttggtcagc atccgcgccg atgtcgcctg tgaagtggtg ctgcgctatc tgcgccgctt
    17161 cgacagcctg cccgaccata ccgacaagat ttttgtggtc gatgaaaacg acgtactgca
    17221 aggcgtgctg cccatccgca aacttttggt cgccgatccc gaagatttgg tggaaaacgt
    17281 gatggcgaaa gatgtcgtgc gtttccgcgc cgaagacgac gtggaagaag cagcgcaggc
    17341 attcgaacgc tatgacttgg ttaccgcgcc cgtcgtcgat gaaaacaaaa agctcatcgg
    17401 cagggtgacc gttgacgaaa tggtggacgt gatccgcgaa gaatccgaag cggatatgtt
    17461 gaacatggca ggtttgcagg aagaggaaga cctgttcgcc cccgtcttgg attccgtcaa
    17521 aaaccgctgg atgtggctcg ccgtcaacct ctgcaccgcc ttcctcgcca gccgcgtcat
    17581 cggcgcgttt gaaggcagca tcgaaaaaat cgtcgcactc gccgcgctga tgcccatcgt
    17641 cgccggcatc ggcggcaact cgggcaacca gacgattacc atgattgtcc gcgcgatggc
    17701 gatggggcaa ctgacaggca tgcaggcagg caggctgttg aaaaaagaag tcggtgtcgc
    17761 cttggtcaac ggcatcattt ggggaacggt catgggcgca gtatcttggc tgctttacgg
    17821 cagcctcggc atcgggctgg ttatgattgc cgcgatgacg ctcaacctcc tgctggcggc
    17881 aaccgtcggc gtattaattc ccgtggtaat ggaaaagttc ggacgcgatc ccgcactggg
    17941 cagctcggtg ctgattaccg ccgttaccga ctccggcggc ttcctgattt tcttggggct
    18001 cgccacccta ttcctgcttt aaatgccgtc tgaacccgcg caaaaatgcc gtctgaagcg
    18061 gaagctgctt cagacggcat ttgactattt atccttgttg cacaagatta ttggacggta
    18121 tgccggggca gccctttggc aacgccgacc acatcctccc cgaacagcgc gttgacatcg
    18181 gtttcgtcaa acacatattt gctgtggcag aaatcgcaat cgacttcgat gctgccttgt
    18241 tccaccacca cgccgccgac ttcttccccg cccagcatca acagcatatc gctgactttg
    18301 ccgcgcgaac aggtgcatga aaattcaaac gtttccggct cgaacacgcg cggcggcgtt
    18361 tcgtggaaca agcggtacaa aacatgttgc gcatccaatt ctgccaactc gcccgccgtc
    18421 agcgtgcgcg ccagcgtact gacgtgttcc catgcctctt catccaacac ctcttcaggc
    18481 agacgctgca ccagcagacc gcccgccgct tcatcgcttg cagacaggac gatgtgcgta
    18541 tcaagctgtt cggaacgttt catatagttc atcaacattt gcgcgatacc gtcgccttcc
    18601 aaaggcacta cgccctgcca gggttcgccg tctttgggct gcagcgtcag cacgaatacg
    18661 ccgccctcgc ccaaaagatc gaccaaactt tcatcttcac cgatttctgc agcctcgtcc
    18721 caccgcgcgg tcgcacggac ggtacggtcg gaagtcgctt ccgcaaccag cattttcagc
    18781 cgcccctgcc cctgaacctg cacaatcagc gtgccttcgt ttttgaggtt gcccgacagc
    18841 agaacaccgg cagccaacag ctcgcccaag gcgcggcgga tggcggcggg atagtttttc
    18901 tgttttacaa tgtgctgcca ctcgttttcc agacggacgt gcagcccgcg cacgggcata
    18961 tcgtcgaaga taaagcgggt acgcacatcg gcgcggttga tggcggtttg attcatgatt
    19021 ttctctgact gattgttcgg atggcggcta tatggttgcg gtcggcgcga aaacaagacg
    19081 gacggcggat gcgcttccca aattatcaat aaattatata aaaatcaaca tattaactca
    19141 atctaacaag ccgttttttg ccaaacagcc gtttttttat atacaatcaa caagatattt
    19201 tcgactgata cagcataaca tcgcacggcg gcacgatgcc tcctgcgcgg aaacaccgat
    19261 atggattctt ttttcaaacc ggcagtttgg gcggttttgt ggctgatgtt tgccgtccgc
    19321 cccgcccttg ccgacgagtt gaccaacctg ctcagcagcc gcgagcagat tctcagacag
    19381 tttgccgaag acgaacagcc cgttttaccc atcaaccgag cccccgcccg gcgggcgggc
    19441 aatgccgacg aactcatcgg cagcgcgatg gggcttaacg aacagcccgt tttacccgtc
    19501 aaccgagtcc ccgcccggcg ggcgggcaat gccgacgaac tcatcggcaa cgcgatgggg
    19561 cttaacgaac agcccgtttt acccgtcaac cgagcccccg cccggcgggc gggcaatgcc
    19621 gacgaactca tcggcaacgc gatgggactt ttgggtattg cctaccgcta cggcggcaca
    19681 tcgatttcta ccggttttga ctgcagcggc ttcatgcagc acatcttcaa acgcgccatg
    19741 ggcatcaacc tgccgcgcac gtcggcagaa caggcgcgga tgggtacgcc ggttgcccga
    19801 agcgaattgc agcccgggga tatggtgttt ttccgcacgc tcggcggcag ccgcatttcc
    19861 catgtcggac tttatatcgg caacaaccgc ttcatccacg cgccgcgcac ggggaaaaat
    19921 atcgaaatca ccagcctgag ccacaaatat tggagcggca aatacgcgtt cgcccgccgg
    19981 gtcaagaaaa acgacccgtc ccgctttctg aactgatttc ccaaggaata cgcaatgagt
    20041 atgcccgaaa tgcccaaatg gtacgacgat gacggacaga tcgtgtcctg taccgaaaag
    20101 gtcaaagtga tgtccgaaaa tatggccgag ctgtatcaga cggcacaaga cgcgtttgaa
    20161 gacgcgctgc tgatgggttg cggcgaacgt cagttgcgcg attacctgct cgcgctgatt
    20221 gaaggtttgg aaaatcccta ccgcaaagtc tgaacacgcc ccggttgctg cggcacggtt
    20281 tatccgtgcc gtttttgcgt ttgtgcgcgg cttcggcttt tcagacggca tatttgacgt
    20341 tatgattaaa cagttaacaa gatttatcac aacgccgtca aaagacagac acacaacatg
    20401 aacatcatcc gcgcgctcct catcatcctc ggctgcctcg ccgccggcga aaccgccgtt
    20461 ttcctagcag gcatcaaact gcccgacagc atcgtcggca tgggcgtgct gtttgcgctt
    20521 ttgcaggcag gttgggtcaa aacgtcttgg ctgcaacagc ttaccgacgc gctgatggcg
    20581 aatctgacgc tgtttctcgt gccgccctgc gtggcggtca tcagctattt ggatttgatt
    20641 gccgacgatt ggttttcgat actggtttcc gcctccgcca gcactttgtg cgtactgctg
    20701 gttacaggca aggttcaccg ctggatacgg agcattatct gatgaacgaa atcctcaggc
    20761 agcccagcgt tctgcttttc ctcacgcttg ccgtgtacgc gcttgcgatt atcgtgcgca
    20821 cgcgcacggg caatatcttc tgcaaccccg tactcgtcag cactatcgtg ctgattgcct
    20881 acctgaaaat cctcgacatc gattatgcgg tgtaccacaa cgccgcgcaa ttcattgatt
    20941 tttggctgaa acccgccgtc atcgtgcttg ccgtgccgct ctaccaaaac cgccgtaaaa
    21001 tcttcaacca gtggctgccc gtcatcgttt cacagcttgc gggcagcgtt acgggcattg
    21061 ttacggggat gtattttgcc aaatggctgg gcgcggaacg cgaagtcgtc ctctcgctcg
    21121 cgtccaaatc tgttaccaac cccatcgcca ttgaaatcac ccgctccatc ggcggcattc
    21181 ccgccattac cgccgccacc gtcatcattg ccggtctggt cggacagatt gccggttaca
    21241 aaatgctgaa gaacacagtc gtcatgccct cgtccgtggg tatgtcgctc ggcacggctt
    21301 cgcacgcgat ggggattgcc gcctcgctcg aacgcagccg ccgcatggcg gcatacgcgg
    21361 gactggggct gacgttcaac ggcgtactga ccgcgctgat tgcgccgctg ctcatccccg
    21421 ttttgggatt ttgaacccgt ttcagacggc atttcagccc atgctgtctg aacgccgaca
    21481 cactcgcaag gagaaccgtt atggctgtca acctgactga aaaaaccgcc gaacaactgc
    21541 ccgacatcga cggcattgcc ctctacaccg cccaagcagg cgtgaagaag cccgggcata
    21601 ccgacctgac actgattgcc gtagccgccg gcagcaccgt cggtgcagtc ttcacgacca
    21661 accgtttctg tgccgcgccc gtccacatcg ccaaatcgca ccttttcgac gaagacggcg
    21721 tgcgcgccct catcatcaac acgggcaacg ccaacgcggg tacgggcgca cagggcagaa
    21781 tcgatgcttt ggcagtgtgt gccgccgccg cccggcaaat cggctgcaaa ccgaaccagg
    21841 tgctgccctt ctccaccggc gtgattctcg aaccgctgcc cgcagacaaa atcatcgccg
    21901 cgctgcccaa aatgcagcct gccttctgga acgaagcggc acgcgccatc atgaccaccg
    21961 acaccgtgcc caaagccgcc tcgcgcgaag gcaaggtcgg cgacaaacac accgtccgcg
    22021 ccacgggcat cgccaaaggc tcgggcatga ttcatcccaa tatggcgacc atgctcggtt
    22081 tcatcgccac cgatgccaaa gtttcccaac ccgtcctcca actgatgacg caggaaatcg
    22141 ccgacgaaac cttcaacacc atcaccgttg acggcgacac cagcaccaac gacagcttcg
    22201 tcatcatcgc caccggcaaa aacagccaaa gcgaaatcga caacatcgcc gacccgcgtt
    22261 acgcccaact caaagaattg ttgtgcagcc tcgcgctcga actcgcccaa gccatcgtcc
    22321 gcgacggcga aggtgcgacc aagttcatca ccgtccgcgt cgaaaacgcc aaaacccgcg
    22381 acgaagcccg ccaagccgcc tacgccgtgg cacgttcgcc gctggtcaaa accgcctttt
    22441 tcgcctccga ccccaacctc ggcaggctgc tcgccgccat cggttatgcc ggcgttgtcg
    22501 acctcgatac tgacctcgtg gaaatgtatc tcgacgatat tttggttgcc gaacacggtg
    22561 gacgcgccgc aagctacacc gaagcacaag ggcaggcggt gatgtcgaag gccgaaatca
    22621 ccgtccgcat caagctgcat cgcggacaaa gtgccgccac cgtctatacc tgcgacctgt
    22681 cgcacggata cgtttccatc aacgccgact accgttcctg acccgacacg gcttcagacg
    22741 gcatacataa aatgccgtct gaaccgccgg acaacatgcc atgacctcca cattcccccg
    22801 ccgcctcgcc cgcaaaatcc gccaaacccg ccgcctgtcg cgcaaaagca tcgcctttct
    22861 gttccttttg gcaggttcgg cactcgtcgc cctgaccgcg ctgttttttg cccatcttgc
    22921 cgattttgcg ctggaactga acgccaaact ggttcaacaa tacccgtggt tcgcgtgggt
    22981 cgcgcttcct ttgggtttgc cgcttattgc gtggctcaca cgcaaattcg cccccttcac
    23041 cgccggcagc ggcatcccgc aggtcatcgc ctcactgtcg ctgccctacg gcgcacagaa
    23101 aacgcggctg atccgcctcg ggcagacgct gctgaagatt ccgctgacct ttttgggtat
    23161 gctgttcggc gtgtccatcg gacgcgaagg tccgtccgtg caggtcggcg cggcagtgat
    23221 gggcgcgtgg ggcgcgtggt gcaagaaaca cggcttggca ttcaaaggga tgcaggaaaa
    23281 cgatttgatg gcggcgggcg cggcgggcgg tttggcagcc gcgttcaacg cgccgctggc
    23341 gggcgtgatt ttcgccattg aggaactcgg gcgcggcatc atgttgcgct gggagaggca
    23401 aattcttttg ggcgtgctcg cctccggttt catacaggtc gccattcagg gcaacaaccc
    23461 gtatttttcc ggcttcaacg gcggcgtatt ggaacatatc tttctgtggg tcgcactgtc
    23521 cggcctggtt tgcggcgcgg cgggcggcct gttcggacgt ttgctctatc gcggtgcggc
    23581 ggcgtttgca ccgcgcaaga tacgcggctt catccgcaac cgtccgctgc tgctggcggc
    23641 actgatgggg ctgctgctcg ccctgctcgg cacgttctac caaggcaaaa cctacggcac
    23701 cggctaccac gaagccgccc aagccctgca cggcatctac gaagccccct tcggactcgc
    23761 cgccgccaaa tggctcgcca ccgtattcag ctattgggca ggcgttccgg gcggcatttt
    23821 cactccctcg ctgaccatag gcgcggtttt gggcgagcat atcgccgcca tcgccgacat
    23881 atcgcagggt gcaaacatca tcgtcctcat ctgcatggcg gcatttctgg cgggcgcgac
    23941 acaatccccg attacttccg ccgtcgtcgt catggaaatg acgggcggac aaagcctgct
    24001 gttttggatg ctaattgcct gcattttcgc ctcgcaggtt tcgcgccagt tttcgccgcg
    24061 tccgttctac cacgcatcgg gaatgcgctt ccgccagcgc gtgcttcaag aaaccgccgc
    24121 ccaaaccggc aatgcgcccg caagaccgca aacagcaaac agcaaaacgg gaatgccgtc
    24181 tgaaaattaa aacgcccccg atcaaacgcc ggcagccgcc ttgatttgaa taccgttccg
    24241 ccgccgcttg aaatttcagc aacaatgccg tctgaacgac agaatgcggt tttcagacgg
    24301 catttcccca tcccgatatt gcctaaacaa aaccgaagcg tttgctataa ttgcactttt
    24361 taccgcacac gcacgcccat gtttcccgat ttctcccaaa ccctctccaa agaccgccac
    24421 ttcctgcaat ccgccttcaa aaatcccaac aaatacggcg gcttgtccaa agtcgaagaa
    24481 aaataccgaa aatcgcacga aatctttttg aaacgtttgg cagccttgcc caaacccgaa
    24541 ttcgacaaca ccctgcccgt tcacgaaaaa cttgacgaaa tcaaaaaaac cgttgccgaa
    24601 catcaggtaa cgattatttg cggcgaaacc ggttcgggca aaaccacgca gttgcccaag
    24661 atttgtttgg aactcgggcg cggggtagcg ggtttgatcg ggcataccca gccgcgccgt
    24721 ttggcggcgc gttcggtggc agagcggatt gccgaagagc tgaaatccga aatcggcagc
    24781 gcggtcggct ataaagtacg cttcaccgac cacacctcgc gcgatgcctg cgtcaagctg
    24841 atgaccgacg gcatcctgct ggcggaaacg cagaccgacc gttatctcgc cgcctacgac
    24901 acgattatca tcgacgaagc gcacgagcgc agcctgaaca tcgacttcct tttgggctat
    24961 ttgaaacaac tcctgccgcg ccgccccgat ttgaaagtca tcatcacctc ggcaacgata
    25021 gacgcagaac gcttctcccg acacttcaac ggcgcgcccg ttttagaagt gagcggacgg
    25081 acgtatcccg tcgaaatcct ctaccgaccg ctgaccggca aagacgaaga cgacgcagaa
    25141 gtggagttga ccgacgcgat tgtcgatgcg gcggacgaat tagcgcgaca cggcgaaggc
    25201 gatattttgg tattcctgcc gggcgagcgc gaaatccgcg aaactgccga agccttacgc
    25261 aaatctacac tgcgccgcaa cgacgaaatc cttcccctgt tcgcacgcct gtcgcacgcc
    25321 gagcagcaca aaatcttcca cccttcaggc gcgaaacgcc gcatcgtatt ggcaaccaac
    25381 gtcgccgaaa cctcgcttac cgtgccgggc atcaaatacg tcatcgacac cggcctcgcg
    25441 cgcgtcaaac gctattccgc acgggcaaag gtggagcagc ttcatgtcga aaaaatctct
    25501 caagccgccg cccgccaacg ctccggccgc tgcggacgcg tctccgcagg cgtgtgtatc
    25561 agactgtttt cagaagaaga tttcaacagc cgccccgaat ttaccgaccc agaaatcgtc
    25621 cgcagcaacc tcgccgccgt catcctgcgc atggcatcgc tgaacctggg cgatgtggcg
    25681 gcattcccat ttttagaaat gcccgattcg cggtatatca atgacggttt tcaggtattg
    25741 ctggaattgg gggcggtaga ggccgtctga aaacaagtag gatatacact tctacctgac
    25801 aaagaccaac aaacgataaa actacggcac atctagatgc ccaacctaca acattgcaca
    25861 cggtaaaaac atgaaacact tactcatcga ttttgaaaac gtccagccgc aaaacttaga
    25921 caaattacca accgaaaata cccatatttg gctatttata ggtgtattac acaaaatgtt
    25981 acctattagt ctggtgcaat ccctactacg tttcggcgaa cgtgtccatc ttgtccagtt
    26041 acaaaaaacg gggaaaaacg cattggattt ttacctgtcc tattacctcg gacaaattac
    26101 cgccacagac cccaatgccc aaatcggcat actctcgcgt gatggaggat acgatgttct
    26161 ggtcgaacat attttgaaaa accaccaggc gaagggtatc gtgcgcctag ccaatataga
    26221 tgaagtacaa catcagaaaa ttactaccga accgccgtca gcattgctgg aaaacactcc
    26281 tcagcctgaa accaccctca aaccacagca accattaact tcctatttcc aagcagccct
    26341 aactgcactg cgccgccccg acgctttccg cccctgccgc ctgcataacc tgcgacaaaa
    26401 tctgcgtaag catattttga gtgatttgtt taaagaaaaa accgatgaag aatgcgaaat
    26461 aaccactgct aacgttatca ataaactcaa agcacaaaac ttcatcagca ttgatgaaca
    26521 ggaaaccgtt tcctaccatc tcagtgataa tgatttgtta caaagaatcc aacgccatat
    26581 tttaagccaa cgtcccaaaa cctacgctga ttttcaagcc gtcgtgcaaa accgagcaga
    26641 tgcacttcac ttaacagtcg gtaccaacga cattcaatcc tttgcgcgac atttgcgcga
    26701 ccaaaacctg atccgccaaa acaatgggaa aattgaatat gcaccgttta ctgaacctaa
    26761 accacagcca acgcccaagc agcctaaaaa aaccgcatgg gaacctgatg aaattatttg
    26821 gaaaaaagtg attgccgcgt tatcgttaaa gaaccgtcct aataaaacca aaactttacg
    26881 caatacaatc caggcactca caaaatccaa tgcacaagaa actgacaaac tgctacaaca
    26941 tttacaagat acccaagtcc tacgtattga cggtactaaa attgtgtata tcaagtagga
    27001 tgggcattta tgcctgacct acaaaaccaa aaacaaccta ccacccttaa tcaactccac
    27061 aaaccctttt cagacaacct cgttttttga aaaacaatct gtaaacagat agctgctgaa
    27121 gaataccgtt gccgagcccc aaaacccgtc ctgcaacttt tattgtgaac ttcccattat
    27181 gaaaaaatcc cttttcgttc tctttctgta ttcgtcccta cttactgcca gcgaaattgc
    27241 ttatcgcttt gtattcggaa ttgaaacctt accggctgca aaaatggcag aaacgtttgc
    27301 gctgacattt gtgattgctg cgctgtatct gtttgcgcgt tataaggcga cgcgtttgtt
    27361 gattgcggtg tttttcgcgt tcagcattat tgccaacaat gtgcattacg cggtttatca
    27421 aagttggatg acgggcatca attattggct gatgctgaaa gagattaccg aagttggcgg
    27481 cgcgggggcg tcgatgttgg ataagttgtg gctgcctgcg ttgtggggca tgttggaagt
    27541 catgttgttt tgcagccttg ccaagttccg ccgtaagacg catttttctg ccgatatact
    27601 gtttgccttc ctaatgctga tgattttcgt gcgttcgttc gacacgaaac aagagcacgg
    27661 tatttcgccc aaaccgacat acagccgtat caaagccaat tatttcagct tcggttattt
    27721 tgtcggacgc gtattgccgt atcagttgtt tgatttaagc aaaatccctg tgttcaaaca
    27781 gtctgcgcca agcaaaatcg ggcagggcag tgttcaaaat atcgtcctga ttatgggcga
    27841 aagcgaaagc gcggcgcatt tgaaattgtt tggctacggg cgcgaaactt cgccgttttt
    27901 gacccagctt tcgcaagccg attttaagcc gattgtgaaa caaagttatt ccgcaggctt
    27961 tatgacggca gtatccctgc ccagtttctt taacgtcata ccgcatgcca acggcttgga
    28021 acaaatcagc ggcggcgata ccaatatgtt ccgcctcgcc aaagagcagg gctatgagac
    28081 gtatttttac agtgctcagg ctgaaaacca aatggcaatt ttgaacttaa tcggtaagaa
    28141 atggatagac catctgattc agccgacgca gcttggctac ggcaacggcg acaatatgcc
    28201 cgatgagaag ctgctgccgc tgttcgacaa aatcaatttg cagcagggca ggcattttat
    28261 cgtgttgcac caacgcggtt cgcacgcccc atacggcgca ttgttgcagc ctcaagataa
    28321 agtattcggc gaagccgata ttgtggataa gtacgacaac accatccaca aaaccgacca
    28381 aatgattcaa accgtattcg agcagctgca aaagcagcct gacggcaact ggctgtttgc
    28441 ctatacctcc gatcatggcc agtatgttcg ccaagatatc tacaatcaag gcacggtgca
    28501 gcccgacagc tatctcgtgc cgctggtgtt gtacagcccg gataaggccg tgcaacaggc
    28561 tgccaaccag gcttttgcgc cttgcgagat tgccttccat cagcagcttt caacgttcct
    28621 gattcacacg ttgggctacg atatgccggt ttcaggttgt cgcgaaggct cggtaacggg
    28681 caacctgatt acgggtgatg caggcagctt gaacattcgc gacggcaagg cggaatatgt
    28741 ttatccgcaa tgagtggcgt aaaaaccaat aaagacaaat ttagatgatg tcggggaaga
    28801 tgcccgaccg acaagactat gcaaaatatg aaaaaccaag tacgcggatc aggcatggat
    28861 gcacgatcca atccggccaa tgtttcagac ggcctgcaaa acagttcggg tcatatcggt
    28921 accaacacgc gttaccgcct gaccaaactc ggcgaacaaa tggcgcgcct gcccatcgac
    28981 ccgaaaatcg cgcgcatttt gttggcggcg aagaagcacg actgcatggc ggaaatattg
    29041 gtgatcgcgt ccgcgctgtc gattcaagac ccgcgcgagc ggccgctgga agcgcgcgat
    29101 gccgccgcca aggcgcacga gcgttttacc gacaagcaat ctgactttct tgcctatctg
    29161 aacatttggg acagcttcca gcgcgagcgc gacaagggct tgtccaacaa gcagttggtg
    29221 cagtggtgcc gtcaatattt cctgtcgcac ctgcggatgc gcgagtggcg cgagctgcac
    29281 caccagcttg cccaaaccgc gattgaaatg ggtttgacca ccaaggaagc ggctttcaga
    29341 cgactttccg aaatcaagca gcttacgtcg tctgaaaacc aaggcgatca agacttatcc
    29401 gccaaacgca aacaaaaaca actggataag aaacaacacc gcgcccaaat ccgcgccgcc
    29461 aaagaagcgg gctacgaaca aatccaccgc gccctgctca ccggccttat cgccaacgtc
    29521 ggcatgaaat cgcccgacgg caacgactat accggcgcgc gcggcagccg tttccacctt
    29581 ttccccgcct ccgccctgtt caaagccaaa cccaaatggg tgatggcggc agaactcgtt
    29641 gaaacgacaa aactttatgc gcgcgacgtc gccgttatcc agcccgaatg gattgagcag
    29701 gaagccccgc acctcgtccg ctaccactat ttcgagccgc actgggaaca aaaacgcggc
    29761 gaagtcgtcg ccagcgaacg cgtgacgctt tacggcctga ccgtattgcc gcgccgcccc
    29821 gtgccttacg gcaaagttgc gcccgaagaa gcacgtgaaa tctttatccg cagcgcgttg
    29881 gtggcgcagg aatgcgattt gaaagcggat ttttttgtcc acaataaaaa gctgattaaa
    29941 gaaattaccg aactcgaaca caaatcgcgc aagcaagacg tattggtcga cgacgaagcc
    30001 ctgtttgcgt tttataacga acgcctgccc gaaatggctt ggaaagacgc gcaaggcagc
    30061 gtttggggaa gtgaagattc cgtacggatt attgaatctg acaaagccga gaggtcgtct
    30121 gaaaatgagc gcaacgagtt tcgtaaaaac aagcgtaatg ggtctcgcca aaatgaaaat
    30181 cacggcaaca ccgtaggttg ggttgaaaac ccaacatcag ccgcaactgc aaaaactgtt
    30241 gggtttgaca acccaaccta cgctactcag caacccaccc cctcccccgc gagggagggt
    30301 cggggagagg gcaaaacagt tgccgcacaa accaactttt ccgcaaccgc agcaaaccct
    30361 ctcccgcagg agagggagca gagtgccgca gcttcagcgg tttcaaacga cctgcatcct
    30421 gcaaatcccc aacaaaccgc cccctccccc gtgggggagg gctggggaga gggcaaaaca
    30481 gttgccaccc aaaccaactt ctccgcaacc acagcaaacc ctctccctaa ccctctccca
    30541 caggaggggg aacagagtgc cgcagcttca gcggtttcaa acgaccctca accccaaaag
    30601 cagccagcac cccaaaaaga ccgtctgaaa cccctccccc tcgccgacat ccgcaccttc
    30661 caagcctggc tcaaaaccgc cgaacgcgag aacccgcgcc tgctgttcct cagccgcgac
    30721 gatttgatgc aacacgccgc cgcacacatt accgaagaac aattccccaa attctggcaa
    30781 accgcagacg gcaagttcga actcagctac cgcttcgagc cgcaccaccc gctcgacggc
    30841 gttaccctca ccctgccgct taccgtgctc aaccgcatca gccccgccgc cctcgaatgg
    30901 ctcgtgcccg gtatgttgcg cgagaaaatc cagctgctga ttaaagcact gcccaagcaa
    30961 atccgccgca tctgcgtgcc cgtgcccgaa ttcatcaccc aatttttaag ccaaaacccc
    31021 gaccgcaacg cccccatcct gccccaactc gcccaagcca tcgccaaaac cgcaggcgac
    31081 atccgcatat tcgagcaaat caaccaagac gaatgggccg cgttcaggct gcccgaacac
    31141 tgctatttca acctccgcat catcgacgac ggcggacaag aattagccat agggcgcgat
    31201 ttaatccaaa tccaacaaca actcggccaa gccgccgccg ttaccttccg cgacaacacc
    31261 caagaattcg agcgcgacaa cgtgaccaca tgggacatcg gcatcctgcc cgaatccatc
    31321 aaattcgcac gcggcaaaca acagcttacc ggctatctcg gcctgcaaaa agaaaaagac
    31381 ggccgcatcg ccctgcgcct gttcgacaca atagaagccg ccgaacaggc acaccgtcaa
    31441 ggcgtgatag aactcatgaa actacaacta aaagaacaag ttaaagacct gaacaaaggc
    31501 atccaaggct tcacccaagc cgccatgctg ctcaaacaca tcaacgccga caccctgcgc
    31561 gacgacctca cccaagccgt ctgcgaccgc gcctttatcg gcgaagacga gctgccgcgt
    31621 aacgaaaaag cctttaaaga gcaaatcaaa cgcgcccgca gccgcctgcc tgccgtcaaa
    31681 gaagccctca gccgctacct gcaggaaacc gcagccgcct acgccgaact caacagcaaa
    31741 ctcggcaaac acccattgac ccacctccta cgccaacgcc tgcaaaccct gctcgccgcc
    31801 ggcttcgcca cccgcacccc gtgggcacaa tggccgcgcc tccccatcta cctcaaagcc
    31861 atgaccctgc gcctcgaaaa atacagcagc aaccccgccc gcgacgcagc ccgcgaagcc
    31921 gatatccaag agctggaaca aatgtggcag gaaaaaacag acagcctgat taaacaaggt
    31981 ctccccattt cagacggcct cgccgcgttt aaatggatga ttgaagaatt gagggtgtcg
    32041 ctgttcgcgc aggaattgaa gacaccgtat ccggtgtcgg tgaagcggtt gttgaagatg
    32101 tgggaggatc ttaattaaag gaagatgccg tctgattttt tcagacggca tcttttattt
    32161 ccctgaccaa ccgatttaat cgctccctac caatagcttt attttttaat tcgcactccc
    32221 aaacgacaat cactttgaaa ccgatctttt ccagctcggt ttcattttta atatcacgtt
    32281 cgcaattttt tgtgattttt tccaaccaaa aatccgtatt gcttttcggg atatgtcctt
    32341 tattacaaga atgcccgtac caaaaacagc cgtgtataaa cacgactgtt ttatatttcg
    32401 gcaaaacgat atccggtttg cctgcatagc gtttatcgtt tttccgataa cgaaaacctt
    32461 gggagaaaag aaatttcctt accaatattt ccggtttggt ttctttgcta tggatttttg
    32521 acatcacgaa agaacgtttg gatgtagtga aaatatcggt cataaattac ttggaagata
    32581 ccaccttcga tcgttttttt gtctgttcca cttttcttaa caaatacgaa accaagctta
    32641 ttaaatccaa agcatcctta tcattaaaaa tactaggaga taaatttgct cttaactcat
    32701 gttgtacagg atttctaaat ccagtccatg ttccgcatgc aagctgttca agaccatctt
    32761 ctaaattttg ttccgccttc gttttgttat tcgttaatag aagtatagaa tttttactcc
    32821 cgaaagcttg ttcaatcaat tctcttccgt ctatgctatg aagacctgtt tgcttctgaa
    32881 ccttattttc gaaaacttta actgcctcga ttgcagcact taaataatcc ttcttttcat
    32941 tgtaaaaatc attacaggca gtatgcaaat cctgatgcaa atgccgccaa tgatagtaag
    33001 gatattctgg aataatacta tgtaaggcag agattacttc cgcttgctct ttatttgtaa
    33061 gctccgaatc ttccaaacga ttcaaaataa cttctactgg ttccctttcc ttttctggca
    33121 atttgttttt ccaattttcg atatcaaccc cgctttcacc tttcacttcg tcatcttttt
    33181 ctttttttct tctttttctc caatcttgcc cgatggctcg aacgatttcc ccaaggaaaa
    33241 cccgtaactt tgaagtttta ggatgcttcc aatccaatga tgtcctatct gtagcaatta
    33301 aatcttcatc atcattatct ataaaatcaa tacttaacca tcctgtcaga taggaataga
    33361 aatggctgga ttcgctatca gtgaaaaact cgggcatatt taccattctg ccgttggcaa
    33421 acaaggtaat acctttcata ttattcttta aaggtttttc cgttgtaatg aacttacctt
    33481 gtattaatcc gctgtattca tactgttcga attttgaaga taacgatgaa atattggttg
    33541 ctagatcctg gtattcccat tcgaattgtg gggtaacaag atcatatttt agatttccat
    33601 caatgatttt gggttccgag ccgttcaagc ttactttgat tttaaaatcc tgagccggaa
    33661 aatcaaacaa gcgggaaaga tgctccacat aattatctaa cgggtatcct tgttttttcg
    33721 tcagttcggt taaagttatg gttgttccgt tttcggtatt gggttcaaca gattctttct
    33781 gaaactccgg ttgataaata cgctcacttt ttttaatctc tgcataatcc aaagtaaaag
    33841 taacccgttc gtttccttgg atagtagaaa tttcaatttt gttgccaagc ccgaataatg
    33901 ccaatttacc aaggcctttt ttacccgttg gaattcttcc gcacggggag gcttgttttt
    33961 cttcccttct gttccgaccg attctcaaat aaaaatcatt gatttcatcg aagctcattc
    34021 ctataccatt atctttaata acgattttat gctccggttt atcgaataac ctaacttcca
    34081 cttccgtagc acatgcatcg taggcattcg ctatcaactc ggcaatcgca ggaacagtgt
    34141 gcgaatacat ctttacaccc aaatgttcga ttacggttgg ctcgaaactc attttcaatt
    34201 tttcttcaga catgttttct ccttttctaa cattcgatat tatcaacaat tgccctgcct
    34261 attttttccg catacatcgg aggaacggca ttaccaatca aacgggctat cttgtccctg
    34321 ctgcccgctt taaagacata gttacgaggg aacgattgca atgttgcacc ttcgcgcagt
    34381 gataacgccc tatcttcttc aggatgggca aacctcccgt tggaaatact aaagaatttg
    34441 gtcgttatgg taggtgcggg cttatcccac catagcctac caaacgtgtc tttaaaacta
    34501 ttgtcttttc cgataaaaca ttccagctgt aattcgggaa tatgcgcaaa agccaaacgg
    34561 tttcctccgt ttttaggtat caaagccaat cgtttcaagt tgatatcaga taatcccgca
    34621 cagctatgca taaaatccgt ttcgtcttgg tgtcctgcaa taattttggg aaagccattt
    34681 tccattccca aaacatcgcg taccgtaagc cgtttgcccg aatacttgac tggttccagc
    34741 ttttctttgg ttattctgtt tgcaattaac gtaaatcttt tacggctttg gggaattccg
    34801 taatcagccg tattgtgaat accgaaatgg acggtaaatc ctttttcttc caataacttt
    34861 atgaaattat caagcctgct ttctttcatt ctgctcagaa ttcccggtac gttctctaca
    34921 acaacatatc cgggattgaa atattctaca aaccgctgaa actccaaaag caaactcttg
    34981 gatttttccg attttctttt gtctgtttga ataacactcc aatattgaca aggactacaa
    35041 cctataagaa tcaaatcatc atcattcttt tttaacccga gttctttttc caaggtttca
    35101 ggctgcaatt caaaaacatc agcctgtata aatttggcat ttatattggc ttcatatgtt
    35161 tctttgcagc tgggttcgta atctatcccg gctaaaacct gaataccggc ggattgcatt
    35221 ccatagctca ttccacctcc gccacagaaa aaatcaaccg cctttaactt actgtttttc
    35281 atttctattt aaataattag actagtgaga actaacttta tataacatat aatttattgc
    35341 ttatcaaaaa taatttgaga ttttattaaa attcatgcat ctaaataagc agaacttaat
    35401 ttcctccaaa cgagcggatg tcttcaaatg cacacttcac agaaaggtcg tctgaaaccc
    35461 attttcagac gacctttttc cacttcccaa aacaagaatt cccaccccct ccccaaacgt
    35521 cgcccgaacc agtaaactcc ccatatttca acaacttctt ggaagccaac catgccccgt
    35581 atccaccctc ctcacctgtt cccgccccat atcgccgaac gcggcctttt gtattttcag
    35641 cagggcaagg ttcgcgatgt ccgaaaaact tccgccgggc gttatcgggc ctggcgctgt
    35701 ttgctgccgg cggtctgaat aatggtggcg tcaacgacgg cagcggatgc tttctctatt
    35761 tttaagcctt tttcggtcag ttggcggtta atcagtttga gcaattcgga ca
//
LOCUS       DAXHKG010000005        32124 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.005, whole genome shotgun sequence.
ACCESSION   DAXHKG010000005 DAXHKG010000000
VERSION     DAXHKG010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32124
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.005"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..215
                     /locus_tag="ACFMWP_000186"
     CDS             <1..215
                     /locus_tag="ACFMWP_000186"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890853.1"
                     /translation="LHIENAAQANLQFASLVLALSHGERGLGCRLPLRFRQILTSLIP
                     RFSFAEAALSDDLLEHHRYTHLRNAV"
     gene            complement(226..549)
                     /locus_tag="ACFMWP_000187"
     CDS             complement(226..549)
                     /locus_tag="ACFMWP_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC5890854.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(629..1285)
                     /locus_tag="ACFMWP_000188"
     CDS             complement(629..1285)
                     /locus_tag="ACFMWP_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HFC5890855.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            complement(1387..1914)
                     /locus_tag="ACFMWP_000189"
     CDS             complement(1387..1914)
                     /locus_tag="ACFMWP_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HFC5890856.1"
                     /translation="MYATIGDVMHALHFSASDKAALYREVLPQIESVVADETDWVANL
                     ANTAAVLKEAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGT
                     VVVGDVDAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGEL
                     AKILEKRFEASRQAV"
     gene            2074..2847
                     /gene="tpiA"
                     /locus_tag="ACFMWP_000190"
     CDS             2074..2847
                     /gene="tpiA"
                     /locus_tag="ACFMWP_000190"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HFC5890857.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2854..3204
                     /gene="secG"
                     /locus_tag="ACFMWP_000191"
     CDS             2854..3204
                     /gene="secG"
                     /locus_tag="ACFMWP_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HFC5890858.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKYGLDFSNVQQTQQAPKPI
                     SNTEPSAPVPQQQK"
     gene            3218..3303
                     /locus_tag="ACFMWP_000192"
     tRNA            3218..3303
                     /locus_tag="ACFMWP_000192"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3252..3254,aa:Leu,seq:gag)
     gene            4104..4472
                     /locus_tag="ACFMWP_000193"
     CDS             4104..4472
                     /locus_tag="ACFMWP_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HFC5890859.1"
                     /translation="MRIFKNQWIVKFAKKHKISDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            4469..4780
                     /locus_tag="ACFMWP_000194"
     CDS             4469..4780
                     /locus_tag="ACFMWP_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC5890860.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            4890..5042
                     /locus_tag="ACFMWP_000195"
     CDS             4890..5042
                     /locus_tag="ACFMWP_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890861.1"
                     /translation="MPDRIKPSRNGDGADDIARQQGTAQTGAKPETSPTARHGDFLSP
                     LQGDWI"
     gene            complement(5550..6104)
                     /locus_tag="ACFMWP_000196"
     CDS             complement(5550..6104)
                     /locus_tag="ACFMWP_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890862.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRTLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYNINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            complement(6101..6910)
                     /locus_tag="ACFMWP_000197"
     CDS             complement(6101..6910)
                     /locus_tag="ACFMWP_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC5890863.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFSDPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            complement(6903..7715)
                     /locus_tag="ACFMWP_000198"
     CDS             complement(6903..7715)
                     /locus_tag="ACFMWP_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFC5890864.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEHYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKESFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            complement(7953..10583)
                     /gene="leuS"
                     /locus_tag="ACFMWP_000199"
     CDS             complement(7953..10583)
                     /gene="leuS"
                     /locus_tag="ACFMWP_000199"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HFC5890865.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKLLQVYTTRPDTLMGATYVAVAAEHPL
                     AAAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYADKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            10850..11365
                     /locus_tag="ACFMWP_000200"
     CDS             10850..11365
                     /locus_tag="ACFMWP_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC5890866.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNNRGTFPTYDELDLMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEGITTCQYKIIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            11372..11815
                     /locus_tag="ACFMWP_000201"
     CDS             11372..11815
                     /locus_tag="ACFMWP_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HFC5890867.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAVNAYIQKKKVIVNTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            11984..14041
                     /gene="ppk1"
                     /locus_tag="ACFMWP_000202"
     CDS             11984..14041
                     /gene="ppk1"
                     /locus_tag="ACFMWP_000202"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HFC5890868.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPIAAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            14066..14335
                     /locus_tag="ACFMWP_000203"
     CDS             14066..14335
                     /locus_tag="ACFMWP_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890869.1"
                     /translation="MPSETFPFQTAWFYSNLNRADWNQKHTFAIPAQALPLYAPNPNP
                     PHSRRHCLSDSRTKPRIRLHGSGHISNTGIVLRKTVKSASASQYI"
     gene            complement(14304..15407)
                     /gene="dnaN"
                     /locus_tag="ACFMWP_000204"
     CDS             complement(14304..15407)
                     /gene="dnaN"
                     /locus_tag="ACFMWP_000204"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HFC5890870.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(15487..17043)
                     /gene="dnaA"
                     /locus_tag="ACFMWP_000205"
     CDS             complement(15487..17043)
                     /gene="dnaA"
                     /locus_tag="ACFMWP_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HFC5890871.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            17336..17470
                     /gene="rpmH"
                     /locus_tag="ACFMWP_000206"
     CDS             17336..17470
                     /gene="rpmH"
                     /locus_tag="ACFMWP_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HFC5890872.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            17473..17838
                     /gene="rnpA"
                     /locus_tag="ACFMWP_000207"
     CDS             17473..17838
                     /gene="rnpA"
                     /locus_tag="ACFMWP_000207"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HFC5890873.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRSTAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            17903..18124
                     /gene="yidD"
                     /locus_tag="ACFMWP_000208"
     CDS             17903..18124
                     /gene="yidD"
                     /locus_tag="ACFMWP_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HFC5890874.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPLGGHGHDPVP"
     gene            18296..19933
                     /gene="yidC"
                     /locus_tag="ACFMWP_000209"
     CDS             18296..19933
                     /gene="yidC"
                     /locus_tag="ACFMWP_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HFC5890875.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGRQSVCAAGECNIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(20014..20724)
                     /locus_tag="ACFMWP_000210"
     CDS             complement(20014..20724)
                     /locus_tag="ACFMWP_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC5890876.1"
                     /translation="MSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTARA
                     HLKHLGVTTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGAN
                     LVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQAFRALEQR
                     SRQCGETQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQEIISQTIVQWRKR
                     KEMPNLKKRPTIFVMYAG"
     gene            complement(20786..21376)
                     /locus_tag="ACFMWP_000211"
     CDS             complement(20786..21376)
                     /locus_tag="ACFMWP_000211"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HFC5890877.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPEALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAIVLLNTVTGRMRRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCALKSEDL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            21524..22027
                     /locus_tag="ACFMWP_000212"
     CDS             21524..22027
                     /locus_tag="ACFMWP_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HFC5890878.1"
                     /translation="MSDPNLIDLEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            22061..22240
                     /gene="rpmF"
                     /locus_tag="ACFMWP_000213"
     CDS             22061..22240
                     /gene="rpmF"
                     /locus_tag="ACFMWP_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HFC5890879.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            22415..22942
                     /locus_tag="ACFMWP_000214"
     CDS             22415..22942
                     /locus_tag="ACFMWP_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HFC5890880.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            23030..24085
                     /gene="plsX"
                     /locus_tag="ACFMWP_000215"
     CDS             23030..24085
                     /gene="plsX"
                     /locus_tag="ACFMWP_000215"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HFC5890881.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENADGL"
     gene            24221..24472
                     /locus_tag="ACFMWP_000216"
     CDS             24221..24472
                     /locus_tag="ACFMWP_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC5890882.1"
                     /translation="MKTLEKRMKALDKQMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            24499..24915
                     /locus_tag="ACFMWP_000217"
     CDS             24499..24915
                     /locus_tag="ACFMWP_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890883.1"
                     /translation="MKTSTVVFGGFFMADNGERIQIPVLENPDIREINHFFSVSNFEK
                     KTGVLVFRIIPEPEFGNTELTVYFEKGYYLPMIQTILEGGDIEVKNLKTENYSGNTME
                     IWGDSYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            24935..25138
                     /locus_tag="ACFMWP_000218"
     CDS             24935..25138
                     /locus_tag="ACFMWP_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890884.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            25165..26127
                     /locus_tag="ACFMWP_000219"
     CDS             25165..26127
                     /locus_tag="ACFMWP_000219"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HFC5890885.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            26174..26545
                     /locus_tag="ACFMWP_000220"
     CDS             26174..26545
                     /locus_tag="ACFMWP_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HFC5890886.1"
                     /translation="MKRQAFFKPIACAAFLSAISLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLILIDYFVPPELFVKLGQHL"
     gene            26571..27497
                     /gene="fabD"
                     /locus_tag="ACFMWP_000221"
     CDS             26571..27497
                     /gene="fabD"
                     /locus_tag="ACFMWP_000221"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HFC5890887.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKQICAEAAQGEVVEAVNFN
                     SPGQIVIAGNAAAVGRAMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            27636..29501
                     /gene="msbA"
                     /locus_tag="ACFMWP_000222"
     CDS             27636..29501
                     /gene="msbA"
                     /locus_tag="ACFMWP_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HFC5890888.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            29601..31166
                     /gene="guaA"
                     /locus_tag="ACFMWP_000223"
     CDS             29601..31166
                     /gene="guaA"
                     /locus_tag="ACFMWP_000223"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HFC5890889.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPILGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDDTPNTLDVWMSHGDKVSKLPTGFTVIGDTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMEKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            31228..31974
                     /gene="fabG"
                     /locus_tag="ACFMWP_000224"
     CDS             31228..31974
                     /gene="fabG"
                     /locus_tag="ACFMWP_000224"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFC5890890.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         8085 a         9339 c         7734 g         6966 t
ORIGIN      
        1 gcctgcacat tgaaaatgcc gcccaagcaa accttcagtt tgccagcctc gtcctagccc
       61 tctcccacgg ggagagggga ttggggtgca ggctgccttt aaggttcagg caaattttaa
      121 cttcgttgat accgcgcttt agcttcgcag aagctgcact ttcagacgac cttttggaac
      181 accacaggta cacgcattta aggaatgccg tctgaaatgc ctgcctcaat aacgcatcat
      241 gttgccgtca atctcggccg cccatgcatc gatgccgccc tgaaggttgt acaggttttc
      301 aaaacccgcg tccgccaaat acatcgccgt atgcaggctg cggataccgt ggtggcaata
      361 caccacaagc ggcacatcat ccggcagctc gttctgccgc agcggaatca gattcatcgg
      421 gatatgcagc gcatttggca gcgaacaaac cgccgtttct tcatccgtac gcacgtccaa
      481 caaacaaaac atccgccctt cgtccatcca cgccttcaat tccgccgacc caagttgcac
      541 aatatccatc gcacccccca aaaaaaaacc aagcaaaatg ccgtctgaag ccccaaaccc
      601 gctttcagac ggcatcgcaa tccgaacatc aaaactgaaa accgccaaac ggatcggcat
      661 ccttatcatc caaatgcgcc accaaggtat cgaacagcac cttctcttca aacacatcgc
      721 ccttgcgcgt aatcaaaagc gcacgctgaa caggcttgcg gcctacgata accaccatgc
      781 gtccgccatc tttcaactgt tctttcaaca cttcaggcac aaggtttacc gcaccgccga
      841 cataaaccgc atcaaacggc gcacctgcgg aaagttcggt caacccgttg ttttgcacat
      901 aatcgatatt gtccaaaccc aagccgtcca acaccgcttt ggcgcggttt tgctgttcgg
      961 catcgatgtc gtccgacacc acacgaccag ccaattttgc caacagcgcg gtcgcatagc
     1021 ccgaacccgt gccgatttcc aaaaccgtat cgtttttcgt cagcttcaag ccctgcgcca
     1081 gccgcgccac gactttcggc tcgagcatct tatgaccgtt ggcaagcggc agcgccatat
     1141 ccgcatacgc caaaccctgc aagtcctcat cgacaaaaag ctcgcgcgga atctccgcca
     1201 aagcgtccaa aacgtcaaaa tccaatacat cccaaggacg gatttgctgt tcgaccatat
     1261 tgaaccgcgc tttttcaaaa tccatttagt gctccgtcaa ataattgttc caacaatagc
     1321 aggcattata aaaccacact cccgccgcgc caacttcggc acgcgccgcc cgcccctttc
     1381 cctcactcaa accgcctgac gcgaagcctc aaaccgcttc tccaaaatct tcgccagctc
     1441 gcccaaatac aaagcatctg tctcatcaaa ctgcgccaaa tgttcgctgt ccgcgtccaa
     1501 cacgccgata cagcggccgt ctgaaaacag cggcacgaca atctccgaac gcgacaaaga
     1561 cgaacaggca atatggtcgg gatgcgcgtc cacatccccg acgaccaccg tcccgccctt
     1621 cgcccaagcc tgaccgcaca ccccgcgacc gaacggaatc cgcgtacacg ccaaaggccc
     1681 ctgaaacggt gccaaaacca attcgtccga acgcgtatcg accaaataaa aacccaccca
     1741 aaaccaaccg aacgcctcct tcaaaaccgc cgccgtgttc gccaaattcg ccacccaatc
     1801 cgtctcgtcc gccaccacag actcaatctg cggcaacacc tcccgataaa gcgcggcctt
     1861 gtccgaagcc gaaaaatgaa gcgcgtgcat cacatctcct atagttgcat acatatcagg
     1921 cggccattat aaaacaacct gcccgaaaca acattccaaa ccgcccccgc agccgcccgc
     1981 cccaagttgc gaacccgccg catatccact aaacttcaca ttgcaacgcg ccacacgcgg
     2041 cagacagaaa aaacacgaca cggagcaaaa aagatgtatc accaaatcgg aatgtgggat
     2101 caaaaatggg tcatcggcaa ctggaaaatg aacggccggc tccagaacaa caattcgctc
     2161 atgcaccgct tccgcatcct ccccaccgcc gaacgcgtcc tcatcggact cgccgccccg
     2221 accgtttacc tgctgcaact gcacaacgcc atgcaaatcg tcttaaacaa ccgcatcctc
     2281 acctgcgccc aagacgtgag ccgcttcccc gacaacggcg cgtacaccgg cgaagtgtcc
     2341 gccgaaatgc tcgccgacac cggcacagac atcgtcctca tcggacactc cgaacgcagc
     2401 ctttatttcg gcgaaaaaaa cgaaatccaa cgccgcaaaa tggaaaacgt cctcaacgtc
     2461 ggactcatcc cgttattgtg cgtcggcgaa agcctcgaag agcgcgaagc cggcaaagaa
     2521 cacgaagtca tcgcccatca gctttccatc ctgcaagggc tggataccaa aaacatcgcc
     2581 gtcgcctacg aacccgtctg ggcgatcggc accggcaaag tcgccaccgt cgaacagatt
     2641 gccgatatgc acgcattcat ctacaaagaa atcttgtctt tgtgcggaag cgatgttaaa
     2701 atccgcgtcc tttacggcgg aagtgtgaaa gcggacaacg cggccgacat cttcgcagta
     2761 ccttatgtgg acggcgcact cgtcggcggc gcgtcattgt cgtacgactc ctttaccgcc
     2821 atcatcagtg ccgcacaaaa tgcgtagaaa aatatggaag ccttcaaaac cctaatttgg
     2881 attgttaata taatttccgc tttggccgtc atcgtgttag tattgctcca acacggcaaa
     2941 ggcgcggatg ccggcgcgac cttcggatcg ggaagcggca gcgcgcaagg cgtattcggc
     3001 tctgccggca acgctaactt cctcagccgt tcgaccgccg ttgcagcaac atttttcttt
     3061 gcaacctgca tggctatggt gtatattcac acccacacga caaaatacgg tttggacttc
     3121 agcaacgtac aacaaactca gcaagcaccc aaacccataa gcaataccga accttctgcc
     3181 cctgttcctc agcagcagaa ataacagttt ttcaaatgcc gacatggtga aattggtaga
     3241 cacgctatct tgagggggta gtggccgtag gctgtgcgag ttcaaatctc gctgtcggca
     3301 ccaacacaca aaacgcttag aaattctaag cgtttttttc gtttaatcct gtctaatgcc
     3361 gtcaaccaat cccaatcaat acaaggattt caggctgatt gttatcctgc cgtccccctt
     3421 cctgacagtg caatcccgtc caatccgccc taattgaact aacctgattt tttacagcat
     3481 ccgaaaatac cgcgagaaaa taccgtaaaa ataaagctga acgaccacca aagcaggaat
     3541 gccaagcggg aaatagcttg cggggaatac tgacgcaccg tagggaatga gggggaaacc
     3601 gtccaagatg cagagcggtt tttttttggg tttttggaaa aaacctatac tatagtggat
     3661 taaatttaaa ccggtacggc gttgcctcgc cttgccgtac cggtttaaat ttaattcact
     3721 ataaaataag aaaaagataa aaaattggta acaaatgcgg taacaaatgg taacgaatcg
     3781 gtaacaactt ttggggtttt ccggtttttc accgtcttgg cagtgggagc gtagcggaat
     3841 gaaaagccaa aacgcacgga accgcgccta ttttgagcag gaatggcggt taaaccgctt
     3901 ggttatatac ggggaatagg aagacagcga aacgcgctaa aaacgcaatt tgagccatta
     3961 aaagcgattg attaaaaaat aatcaggtta gccgccagtg tttcaggcgg cataaacgga
     4021 gaaattgcag ggtataaaaa ggcggcttgc cgtgttgtct gtctctggta taattccaag
     4081 tatcactaat caacggctac acaatgcgga tattcaaaaa ccaatggata gtgaaatttg
     4141 ccaagaaaca taaaatcagt gattccgagc tgctggaagc ggtagagcgg gcggataacg
     4201 ggctgataga cgcagattta ggcggcggtg tgattaagca gcgcatagca aggcaaggac
     4261 aaggcagaag cggcggctat cgcagcctga tattgttcaa acaggcagat agggcatttt
     4321 tcgtttacgc ctttgccaag aacgacaggg aaaacatttc ggataaagaa ctggacgttt
     4381 accgaaaagc cgccgcatat tatctgaaat acacgcgggc agagctggcg gctttgaaag
     4441 aagacggcat tatcacggag atagaatcat gaaatacaaa agcgaggcat tagccgccat
     4501 tcatgaaatg atggaagggg cttacaacat cggcgcaatc gacaaaaaga ctatgcgcgg
     4561 ctttgacaag tcctgcctga ccgaaatcaa accgttgagc ggcggagaca tcaaggcaat
     4621 cagggagaag gaggcactat cgcaagccgc tttcgccatc tatctcaacg tgggaaaaaa
     4681 tcacgtttcg gcttgggagc ggggcgttaa aaagccgagc ggcgcggcgt tgaagctgct
     4741 gaccatcgtc aaaaacaagg gtatcgaagc cattgcgtag ccgacttggc aaacggcaaa
     4801 atcagcaagt tcacaataga cacgctgctg aatatgcctg ccaaaacagg caagaccgcc
     4861 gaactgaata tcagggcgta gccgcataaa tgcccgaccg catcaaacca agccgaaacg
     4921 gcgacggtgc agacgacata gcccgacagc aaggcacggc gcagacgggc gcgaaacccg
     4981 aaacatcccc gaccgcgagg cacggggatt ttttgagccc gttgcagggg gattggattt
     5041 aagcggcgcg ggcttgaaag caaaacgggc ggggcgcaga actgtttaaa tgccgtctga
     5101 atctcaaacg atttcagacg gcattttgaa acaacggctc aaattctcga tccccttccc
     5161 ttaacgccga cgttttttat taacgcgccc cttatttctg acactttgct cataaaccgg
     5221 cataacggtc ggcaacaacc gttttagatt ttctatacgg gcattgttta cagcatcagc
     5281 ataagacacc gtactctgga ataccgccta aaccctgcgg atagttttgg atgtggtatc
     5341 gacattgtcg gcagacttgt ctaactcgac cgttttcaaa taatctttga cagatgctgc
     5401 attcagtgtc gcggaatccg cgtattttga acaaaaggtc gggctacttt atcacaatag
     5461 cagaaagatg gaaaacggcg gggattggtg aaaggtcgtc tgaaatgata ttcagacgac
     5521 cttgaacggc tgtgttttaa atatggtatt tattcatttg tttcaccatc aggcagtcca
     5581 aaccacctta agggaatcgt gttaaattgg taatggcagt taacactgat aatataatct
     5641 aaaacatctt tatattccgg ctttgtaaac caatcattca aaacatagac atattcaacc
     5701 cgccaaccta aagagtgaac caattttgta tattgttttc tcttaaaatc gcaagtttgt
     5761 aatttctcat ctactgaacc gggagtttgt tggaatttga tctcaataat aaataaggta
     5821 tcacggatga tgataaataa gccattgtcg ggtagtaatc ttttagacag atggtctttc
     5881 caattaatat tgtatcccgg tcttttcaaa aatcggtaaa actcatattt tttaaaacaa
     5941 taagccttca attctccatt gaaccaaact tcataacccg cattatcata tgtttttctt
     6001 aagtcgtacc cgggaatttc ttcaaacaac gttcgtaagt ctgtacgttc ttcgaatctg
     6061 agtcctgttt gtgtccttgc accaccgatt ccgccaataa tcatttttct aacctttttt
     6121 ttgctaattc aaaaaaatct tcttccagtt cgcaaccaca aaatttccga ccatgtttta
     6181 aggcggcaac gcctgttgtg ccgctgccca tgaaagggtc aaaaattaaa tctccgatgt
     6241 ttgaagctga gagtatgcag cgttcaagca aggggagtgg tttttgtgtc ggatgtttgc
     6301 cgaatgtttt ttcggctttg tttggaggag gaaatgtcca aacacatttc atctgtttgc
     6361 catcattttg tgctttcatc atttcataat gaaacgtgtg tttggctttt ttatttttct
     6421 ttgcccataa gattgtttct gtcgaatggg taaaaaaacg gcaggacaaa ttagggggag
     6481 gattgggttt ttcccaagta atattgttca aaatatggta tccgatagtt tgcatcaggt
     6541 agccgattaa ataaatatta tggaatgtgc cgcaaaccca aattgtgccg tttggtttta
     6601 ataaggcgta acacagtcgg agccattctt cgtagaattc caaatctgcc gccattcctt
     6661 tggatttatc ccagttgccc ttattgacgg aaaccatttg tccgttttga caactgaagc
     6721 cgtcattgga aagaaagtaa ggcgggtctg agaaaatcat atcaaaacag ccgtttggat
     6781 atttttccaa tatcttccgc atgacgttaa gggaattttc gttgtagagg acaaggtcgt
     6841 ctgaaacgat ttttttcaaa cgactttgat aaatggcgtc ttcttcagcc ggtttgtcaa
     6901 aatcaatcat aaattgccaa taattctccg acttttttac ggctgctgcc ttttgcggca
     6961 atattgcgtt gtacttcaat tgttttcaga atggcaaaag aataaatatc ccttgtgaat
     7021 tcagtatcat gatttgaaat caaaacgcct tgggaatcgg gcgcaatttg ttgggctgac
     7081 tgggcaagac ggatttgatt gtctaaattg aaactttctt tggcataagt ggtaaatgaa
     7141 gcggttgggc ttaaaggcgc gtaaggggga tcgcaataaa ccgtatcggt attgtctgtc
     7201 tgagatagaa tcatttgaaa atctccgcac attaattcaa ctctgtcaga tttctgaatg
     7261 aaaccttcca tttcttgttg gggaaagtac ggcgatttgt agcgtccgaa cggcacattg
     7321 aatacccctt tgctgttgta acggcataaa ccgttaaaag catgacggtt caaataaata
     7381 aatagtgctg agcgttcgtg cagatttttg ctgaagttga attgttcccg caattcatag
     7441 aatcttgaat cgctattgtt ttcggaaata aagaaagagc gggcgtagtc gatgaatccg
     7501 gatttttctt cttttaggat acggaataag ccgattaagt cagcgttaat atcattgagc
     7561 agataatgtt cgaagtccaa tgcaagagac aaagcggcag aaccgcaaaa gggttcaatc
     7621 aggcgttttc gtgtaggagt gggtagatta tgttcgataa aggggacaag tttatgtttg
     7681 ccgcctgccc attttaggaa gggttttgaa gccattagga tgcagagtat aagcgtggtt
     7741 gattggcttg gaattgtgcc aaaacatcgt gaggaataca acggatttat attttgggga
     7801 cgtgtgtaga gtgagtctaa atccaataga acctttccat tccaatatgt tattggactt
     7861 atcaactcca tctgccttaa aaaggccgtc tgaaaccctg tttcccagtt ttcagacggc
     7921 ctttatccgt atggctaaac cttaagagcg gtttagacga cgatattcac caagcgtccg
     7981 ggaacgacga tgattttctt cgccggtttg ccttccatga atttcaccgc gccttcggtg
     8041 gcgagtgcgg cggcttcgag gtcggctttg gatgcgtcgg cggcaacagt gattttgccg
     8101 cgcagtttgc cgttgacttg aaccatcact tcgatttcgg atttgaccaa ggcggcttcg
     8161 tcgactgtcg gccagcctgc ttcccacagt ttcgcgccgt tcaattcgct ccacagggtt
     8221 tcgcagatgt gcggcacgat gggccacaac aggcgtacgg cggtttccaa tacttcttgg
     8281 gcgacggcgc gtccttgttc gccgccggtg tcggttttgt cgtattggtt gagcaattcc
     8341 atcacggcgg cgatggcggt gttgaactgc tggcggcggc cgtagtcgtc gctgactttg
     8401 gcagtggtcg cgtgcagttt gtggcgcagg tctttgagtt ctttagacaa accgtcttgg
     8461 ctgcctgcga acgctttgac cgcttcgcct tgcttcaagt attcgtaaac ggtacgccac
     8521 aggcggcgca ggaagcggtg tgcgccttcg acgccgctgt cgctccattc gagggactgt
     8581 tcgggcggtg cggcgaacat cataaacagg cgggcggtgt ccgcgccgta ggcgttaatc
     8641 agttcttgcg gatcgacgcc gttgtttttg gacttggaca ttttttccgt gccgctgatg
     8701 acgacgggca gcccgtcggc tttgaggacg gcggaaatgg ggcggccttt gtcgtcgaac
     8761 gtcagctcga catcggcggg gttgatccaa tctttgccgc ctttgtcgtt ttcgcggtag
     8821 taggtttcgc aaacgaccat gccttgcgtc agcaggcgtt caaacggttc gtcaacattg
     8881 actagacctt cgtcgcgcat cagtttggtg aagaaacgcg cgtacaagag gtgcaaaatc
     8941 gcgtgttcga tgccgccgat gtattggtcg accgcgcccc agtatttcgc ggcggcagga
     9001 tcgaccatgc cgtctgaaaa ttttggcgac atatagcgga agaaatacca gctcgattcc
     9061 atgaaggtgt ccatggtgtc ggtttcgcgt tttgccgcgc cgccgcagca tgggcaggca
     9121 gtttcgtaaa actcgggcat ttttgccagc ggcgaaccca tgccgtcggg tacgacgttt
     9181 tcaggcaaaa cgaccggcaa ttggtcggca gggacgggta cgtcgccgca ttgttcgcaa
     9241 tggacgatgg gaatcgggca gccccagtag cgttggcgcg aaatgcccca gtcgcgcagg
     9301 cggtattggg ttttcggttc gcccgcgcct tggctttgca gcttggcggc aacggcatcg
     9361 aatgccgtct gaaaatccaa gccgtccaag tcgccgctgt tgaccaatac gccgttttct
     9421 ttgtcggcat accattcttg ccatcggttt gcgtcgaatg cgttgtcgcc gacggcaatg
     9481 acttgttttt taggcagatt gtatttggcg gcgaactcaa aatcgcgttc gtcgtgcgcc
     9541 ggaaccgcca tcactgcgcc gtcgccgtag ccccacaata catagttggc aatccacact
     9601 tccagcttgt cgccgttgag cgggttgacg acgtagcgac cggtcggcac gccttttttc
     9661 tccatcgtcg ccatatcggc ttcggcaacc gaaccggctt tgcattcggc aataaatgcc
     9721 tgcaattcgg gtttgtcggc ggctgcggcg gctgccagcg gatgctcggc ggcaacggca
     9781 acataagtcg cacccatcag cgtgtcgggg cgggtggtat aaacttgcag caatttcgcg
     9841 taatcgcctt ccaagccttg tttgctgtcg tctgaaacgg cgaagcgcac ggtcataccg
     9901 cgcgatttgc cgatccagtt gcgctgcatg gttttgactt gttccggcca gtgttccagc
     9961 ttgtccaagt cgttgagcag ctcttcggcg taatccgtga ttttgaagta atacatcggg
    10021 atttcgcgtt tttcgatcaa cgcgcccgaa cgccagccgc gtccgtcgat gacttgctcg
    10081 ttggcaagga cggtttggtc gaccgggtcc cagttcaccg tgccgttttt gcgatagacg
    10141 atgccttttt caaacagctt ggtaaacagc cattgttccc agcggtagta ttcgggtttg
    10201 caggttgcgg tttcgcgcgc ccagtcaatc gcaaaaccca ggcttttgag ctgggttttc
    10261 atgtattcga tgttatcgta cgtccaagcg gcaggggcga cgttgttttt catcgccgcg
    10321 ttttccgccg gcatgccgaa cgcgtcccaa cccataggct gcatgacgtt gaagccgttt
    10381 aaaagtttga agcggctcaa tacatcgccg atggtgtagt tgcgcacatg ccccatgtgc
    10441 agcttgccgc tgggataggg gaacatggag aggcaataat atttgggttt ggaagcgtct
    10501 tcggagacgt tgaaaatacg ggcgtcgtcc cattttttct gcgccgcagg ctcgatggcg
    10561 gcgggttggt aatgttcttg catggtcatt ctgtttttcg cttgaaaacg ttaggaattt
    10621 aaaggaggaa ttataacagg ttgccgatgt cggcgaatcg gcaaattgcc ggcaggatgc
    10681 gtaaattcgc acgcgcatca ttccgtatgc cgtacaaata caccgcgttt actgatacgc
    10741 acgtttttta tgctaatatt acaaaccaaa atcaaatgtt taaaactctc ctgatgcggc
    10801 tcttccgaac aaaaggcaga cgggcatcgg gtaaaagagg attctgcata tgaaaatcaa
    10861 acaaatcgtc aaaccgggct tggcagtatt ggcggcgggc gttctgtctg cctgcgcaac
    10921 caaaagcaac gtcaaagccg acggaacgac cgacaatccg gttttcccga aaccctattc
    10981 cgtaacgctc gacaacaatc gcggtacatt cccgacctat gacgaattgg acttgatgcg
    11041 tcccggtctg accaaagacg acatctacaa aatcctgggt cgtccgcatt acgacgaagg
    11101 tatgtacggc gtgcgcgaat gggattatct gttccacttc cacaccccgg gcgtaggcat
    11161 cgaccctgaa aacacttccg gcgtagaagg cattaccacc tgtcaataca aaattatttt
    11221 cgataaagac aaatttgccc gcagcttcta ctggaacccc gtcttcccga aagatgccgc
    11281 ctgtccgccg cccgcaccca aagccgagcc gcaagtcatc atccgcgaaa tcgtgccggc
    11341 aaaaccgaaa cgtatccgcc aataatccga catgccgttc cgcctgtttt tagggatatt
    11401 atgcggcctg tcaatggttg cccccgtata tgcacagggg caaccggatg cggtcaacgc
    11461 ttatattcaa aagaaaaaag tcatcgtaaa cacatccaaa gcggaactct gttttgccga
    11521 tgacaggcag tgccaccccg tcctcatcgg tgttgccacg cccaagggga cgttcgggct
    11581 gacgctgaac agtaccgaca agcctggata cggcggcgaa gtcatcggtt tcaagcagga
    11641 gggtgatttt cttttcgccc tgcaccgcgt ttggaatcag ataccgtcgg aaaggcggaa
    11701 cgaacgcatc gcctccccgt ccgtgtccga caggattatg accaacggct gcatcaacgt
    11761 cagcgatgcg gtgtacgaaa aactgcgtca ttattttgtg ttggaagtga tttgaaacag
    11821 acggataccg cacgcgccgg tatctgtttt cacattgccc cgatgcctga aacagactgt
    11881 ccgccacgtc atgccgtctg aaaccggcgc agatgccgcc aagccttcag acggcattgc
    11941 ctgcccgctc cgaccgaaca acaaccatct ttgggagaac cttatgcccg aacaaaaccg
    12001 catcctctgc cgcgaactaa gcctgctggc attcaaccgc cgcgtgttgg cacaggcgga
    12061 agacaaaaac gtcccccttt tggaacgcct gcgcttcctg tgcatcgtgt cgtccaatct
    12121 tgacgagttt ttcgaagtcc gcatggcgtg gctcaagcgt gaaaacaagc tgcacccccg
    12181 gcgcaggctg gacaacggca aaatgccgtc tgaaaccatc gccgacgtta ccgaagcggc
    12241 gcgctccctg atacggcatc agtacgacct gttcaacaac gtccttcagc ccgagttggc
    12301 gcgggaaagc atccattttt accgccgccg caactggacg ggcacgcaga aaaaatggat
    12361 cgaagactat ttcgaccgcg aactgctgcc gatcctgacc cccatcggac tcgacccgtc
    12421 ccaccccttc ccgcgaccgc tgaacaaatc gctcaacttc gccgtcgaac tcgacggcac
    12481 ggacgcattc ggcaggcctt cggggatggc gattgtgcag gcaccgcgca tcctgccgcg
    12541 cgtcgttccc ctgccgtccg aactgtgtgg cggcggacac ggcttcgtct tcctgtcgtc
    12601 catcctccac gcccacgtcg gcaaactctt cccgggcatg aacgtcaaag gctgccacca
    12661 gttccgcctg acgcgcgaca gcgacttgac cgttgacgaa gaagacctgc aaaacctccg
    12721 cgccgccatc caaaacgaac tgcacgaccg cgaatacggc gacggcgtgc ggctcgaagt
    12781 cgccgacacc tgtcccgcct acatccgcga ctttctgctc gcgcaattca aactgaccgc
    12841 cgccgaactc tatcaggtca aaggcccggt caacctcgtg cgcctcaacg ccgtccccga
    12901 cctagtcaac cgccccgatt tgaaatttcc cacacacacg ccgggcagac tgaaagcctt
    12961 gggcaaaacc gcgtccatat tcgatttggt gcgccaatcg cccatcctgc tgcaccaccc
    13021 ctaccaatcg ttcgaccccg ttgtcgaaat gatgcgcgaa gctgccgccg accccgacgt
    13081 gcttgccgtc aaaatgacga tttaccgcac cggcacgcgt tccgaactcg tccgcgccct
    13141 gatgaaggcg gcactcgccg gcaaacaagt aaccgtcgtc gtcgaactga tggcgcgttt
    13201 tgacgaagcc aacaacgtca actgggcgaa gcagctcgaa gaggcgggcg cgcacgtcgt
    13261 gtacggcgtg ttcggctaca aagtccacgc caagatggca ctggtcatcc gccgcgaaga
    13321 cggcgtactc aagcgttacg cccacctcgg cacgggtaac taccaccaag gcacatcgcg
    13381 catctacacc gacttcggca tcattaccgc cgacgaacaa atcaccgccg atgtgaacac
    13441 attgtttatg gaaatcacag gcttgggcaa acccgggcgg ctgaacaaac tctaccaaag
    13501 cccgtttacc ctgcacaaaa tggttatcga ccgcatcgca cgcgaaaccg aacacgcaaa
    13561 agccggcaaa ccggcgcgga ttaccgccaa gatgaattcg ctcatcgaac cgaccgtcat
    13621 cgaagccctg tatcgggcaa gcgcggcagg cgtacaaatc gatttgattg tgcgcggtat
    13681 gtgcaccttg cgcccgggtg taaaaggctt gtccgaaaac atccgcgtcc gctccatcat
    13741 cggcaggcag ctcgaacacg cgcgcgtgta ttgcttccac aacaacggcg cggacgatac
    13801 ctttatctcc agcgcggatt ggatggggcg caacttcttc cgccgcatcg aaaccgccgc
    13861 gccgattgcc gcgcccgaac tcaaaaaacg cgtcatccgc gaaggtttgg aaatggcact
    13921 ggcagacaat acgcacgcgt ggctgatgca gcccgacggc ggctatatcc gcgccgcgcc
    13981 tgccgagggc gaaagcgaag ccgacctgca aaacgatttg tggacactgc tcggaggctg
    14041 acccgcaccg ccccaatcaa aaaccatgcc gtctgaaacc tttccgtttc agacggcatg
    14101 gttttacagc aatctaaaca gggcggactg gaatcaaaaa cacaccttcg ccattcccgc
    14161 acaagcactt cccctatacg ctcccaaccc caatccgccg cattccagac ggcattgcct
    14221 ttccgacagc cgaacaaaac cccgaatccg tctgcacggt tcggggcata tctccaatac
    14281 gggcatcgtg ctccggaaaa ccgtcaaatc cgcatcggca tcacaatata tttgaaattc
    14341 ggattgttcg gcacggtaaa cagcgtcgag cggttggcat cgccgaaggc aagctgcata
    14401 tcgtcggaat ggatgttgcg caacacgtcc atcagatagc cgatattgaa accgacttcg
    14461 agttcgccgc cctgataggc aatctcgatt tcttcgcgcg cttcttcctg ctcgttgttg
    14521 ctgcacacga cgctcaacag gccggattgc aggaacaggc gcgcgccacg gaatttttcg
    14581 ttggcaagaa tggacacacg ttccagcgcg cccaaaagtt cggcacggga caaaacgaaa
    14641 atcttgtcgt tgtccaaagg gatgacgcgg ttgaaatcgg ggaatttgcc gtcgataacc
    14701 ttgctgacga tggtcgtgcc gttgcattgg aaacgcacct gcttgtccag cagctcgatt
    14761 tgaatcggat cgtcggggtt gttcaacagt ttgaacagtt ccagcaccgt tttgcgcggc
    14821 aaaatcactt cggcgcgcgg caaatccgca tcaatcgcgc aggctgcata ggcaaggcgg
    14881 tgtccgtcgg tcgccacaag gcgcaactgg ctgccctcaa cctgcatcag cagaccgttg
    14941 agataatagc ggatgtcctg caccgccatg ctgtactgca cttgcgacag catggttttg
    15001 aaacgctcct gctccagcga gaaagtcgcg ctgatgtcct cgccgacatt catcatcgga
    15061 aaatcggcgg caggcagggt ctgcagggca aaacgcgatt tgcccgcctt cagcgtcaga
    15121 cggctgtcgt cccaatccag cgacaccagc gcaccggcag gcagcgcgcg caaaatgtcc
    15181 tgaaatttct tggcattggt ggtgatgcgg aagtcgtccg cgccgccctc gggacccgca
    15241 gtgtcgattt ggatttccaa atcggttgcc aagagtttgg tctgaccgcc ttttccctca
    15301 atcaggacgt tggacaggat gggcagggtg tggcggcgtt cgacgatgcc ggtaacggct
    15361 tgcagcggct tgagcaggct gtcgcgttcg gcttgtaaaa tcaacatgtt cgctccttta
    15421 aatcggttgg attttttacc cttcggacgg catgggcaat atcatgccgt ctgaaaacgt
    15481 tttccatcag ttttgaatca gaatcagcag cttttcataa tcctgagcca attccggatc
    15541 ttcttcgcgc agtttcgcca ctgccctgat gccgtgcata acggtcgtat ggtcgcgccc
    15601 accgaacgaa tcgccgatag acggcaggct caaagtggtc agttctttgg tcaggctcat
    15661 cgccacctgg cgcggacggg caatgttgcg cgtgcgtttt ttgccgagta cgtcgctgat
    15721 tttgatgcgg taatatttgg caacggcatc aataatgata tcggcggtaa tgaccttatg
    15781 cttctcggca ataatgtcct gcaaagcggt acgcgccaaa tcgatgtcga tgacgggacg
    15841 gttcataaag cggctgctcg ctccgacacg gttaaacgcg ccttcaagct cgcgcacgtt
    15901 ggaacggatc agattggcaa tgaacagcgc ggcttcgtct tcaatactga tgcccgccgc
    15961 ttccgccttt ttctgcaaaa tggcgatgcg catttccaat tcgggcggct cgagttccaa
    16021 agtcagtccc catgaaaaac gggatttgag gcggtcgtcc atgccttcga ttttggcggg
    16081 taaaacatcg caagtgagga tcagctgttt tttctcgttg tggaaatggt tgtacagata
    16141 gaaaaactct tccatcgtac ggtcttttcc tttaataaac tgaatatcgt cgataatcag
    16201 caggtcgtat tgcttgtatt gctgcttgaa tacgtcatag gtattgttgc gaaccgcctt
    16261 cataaagctg cggatatagt cgtccgaatg catatagcgc actttggcat cgggacggtt
    16321 tttcaaaagc tcgttgccga ccgcctgtac caggtgggtt ttgcccaaac ccgtgctgcc
    16381 gtacaggaaa aacgggttgt agctctgccc cgggctttcc gcaatcgcct gcgccgcagc
    16441 cgccgcaagg cggttgccct tgccttcgac caatgtgtcg aacgtatagt ccggcgacag
    16501 attggtctgc tcgtaacgtg cctcttccgc atcgcgctgc gcatccgtcc gcgctttcgc
    16561 aagcacctcc gattccggac gggaagcagg ttcggcagta tggcgcggct catgcgggag
    16621 gtttttcata cgttccgcca gaatatccgc cgccgttttc gacgcagcgg gtttgacagg
    16681 ctcttcagac ggcagctcgt ccaacagaac ctcctgcaca ggcatctcct ccgaccccgc
    16741 gtgcaaggac ggctcggcag gttcgacagc accttcaacc gccgccatct cataacgcac
    16801 gccttctcct ggtttgaata cgaaggcgga acggccagca gccaactctt ccctcaccgc
    16861 ttctattttc ccggcaaact ggctcttaag catattgcag gcaaactggt tcttgccgta
    16921 caccacccat acgccaccct cctcaccgac ggtaaggggc gcaatccatt gcgcaaactg
    16981 cccttgaggc aacatatcgt gaagacggcg gaggcacagc ggccaaaact ctgctaatgt
    17041 catggataag ctcgaatcgg taaaaatgaa atcgaaaaca aagaaaatat aatattttca
    17101 aaaagaaaac aaatctgttg aacacacatc ggttcaaaat gcagcgaacc gaattatacc
    17161 gactcgccga tattttatcc acaacccgtg caaaatttat ccacagaaag gcggcagaaa
    17221 tccgcaggca atcgggcaat cctcctgcaa agtttctata ttgattgaca aaagcggcaa
    17281 attggagtgt aattcacggt ttaattatct acccattcta tttttaggaa acatcatgaa
    17341 acgcacttat caaccttccg ttaccaaacg caaacgcacc cacggcttcc tggtgcgctc
    17401 caaaacacgc ggcggccgcg cagtattggc tgcacgccgc gccaaaggcc gcaaacgcct
    17461 ggcggtataa ttttggacta ccgcttcgga aggcagtacc gcttgttgaa aacggatgat
    17521 ttttcatccg tttttgcatt cagaaaccgc cgcagccgcg acctgctgca agtttcgcgt
    17581 tcaaacggca acgggctgga ccatccccgc atcggtctgg tggtcggcaa aaaaaccgcc
    17641 aaacgcgcca acgaacgaaa ttatatgaag cgcgtcatcc gcgactggtt cagattgaac
    17701 aaaaaccggc tgccgccgca ggatttcgtc gtgcgcgtcc accgtaaatt cgacaggtct
    17761 accgcaaaac aggcaagggc ggaactggca caactcatgt tcggcaaccc cgcaaccgga
    17821 tgcaggaaac aggcatgatc agaacggtac tctgcaggca aggttcagac agcaacgggt
    17881 ttcccataca aggaacatcc cgatgaactt cctattgtcc aaactcctgc tgggactgat
    17941 acggttctac caatattgca tcagcccgct gattccgccg cgctgccgct atacgccgac
    18001 ctgttcgcaa tacgccgtcg aagcagtcaa aaaatacggc gcattcaaag gcggccggct
    18061 cgccatcaag cgcattgcac gctgccaccc cctcggcgga cacggacacg accccgttcc
    18121 ctgacccgac gcaatattca aattgcacgc tttcctttta tttcccatcg gtttctatat
    18181 aatgccgtct gaagcttcgg gcaggcggca cgaccgtcgg gtatgaaacc cgcccttatt
    18241 ccccgtctat cggaacacgc aacctgcggc atttccgacc attcaggaaa ctcttatgga
    18301 ttttaaaaga ctcacggcgt ttttcgccat cgcgctggtg attatgatcg gctgggaaaa
    18361 gatgttcccc actccgaagc ccgtccccgc gccccaacag gcagcacaac aacaggccgt
    18421 aaccgcttcc gccgaagccg cgctcgcgcc cgcaacgccg attaccgtaa cgaccgacac
    18481 ggttcaagcc gtcattgatg aaaaaagcgg cgacctgcgc cggctgaccc tgctcaaata
    18541 caaagcaacc ggcgacgaaa ataaaccgtt catcctgttt ggcgacggca aagaatacac
    18601 ctacgtcgcc caatccgaac ttttggacgc gcagggcaac aacattctaa aaggcatcgg
    18661 ctttagcgca ccgaaaaaac agtacagctt ggaaggcgac aaagttgaag tccgcctgag
    18721 cgcgcctgaa acacgcggtc tgaaaatcga caaagtttat actttcacca aaggcagcta
    18781 tctggtcaac gtccgcttcg acatcgccaa cggcagcggt caaaccgcca acctgagcgc
    18841 ggactaccgc atcgtccgcg accacagcga acccgagggt caaggttact ttacccactc
    18901 ttacgtcggc cctgttgttt atacccctga aggcaacttc caaaaagtca gcttttccga
    18961 cttggacgac gatgccaaat ccggcaaatc cgaggccgaa tacatccgca aaaccccgac
    19021 cggctggctc ggcatgattg aacaccactt catgtccacc tggattctcc aacctaaagg
    19081 cagacaaagc gtttgcgccg caggcgagtg caacatcgac atcaaacgcc gcaacgacaa
    19141 gctgtacagc accagcgtca gcgtgccttt agccgccatc caaaacggcg cgaaagccga
    19201 agcctccatc aacctctacg ccggcccgca gaccacatcc gtcatcgcaa acatcgccga
    19261 caacctgcaa ctggccaaag actacggcaa agtacactgg ttcgcctccc cgctcttctg
    19321 gctcctgaac caactgcaca acatcatcgg caactggggc tgggcgatta tcgttttaac
    19381 catcatcgtc aaagccgtac tgtatccatt gaccaacgcc tcttaccgct ctatggcgaa
    19441 aatgcgtgcc gccgcaccca aactgcaagc catcaaagag aaatacggcg acgaccgtat
    19501 ggcgcaacaa caggcgatga tgcagcttta cacagacgag aaaatcaacc cgctgggcgg
    19561 ctgcctgcct atgctgttgc aaatccccgt cttcatcgga ttgtattggg cattgttcgc
    19621 ctccgtagaa ttgcgccagg caccttggct gggttggatt accgacctca gccgcgccga
    19681 cccctactac atcctgccca tcattatggc ggcaacgatg ttcgcccaaa cttatctgaa
    19741 cccgccgccg accgacccga tgcaggcgaa aatgatgaaa atcatgccgt tggttttctc
    19801 cgtcatgttc ttcttcttcc ctgccggtct ggtattgtac tgggtagtca acaacctcct
    19861 gaccatcgcc cagcaatggc acatcaaccg cagcatcgaa aaacaacgcg cccaaggcga
    19921 agtcgtttcc taaatgccgc agcatgaaaa atgccgtctg aaacctgttc agacggcatt
    19981 tttattgccc accccctatc ggggcggaaa tcttcaaccc gcatacatca caaaaatcgt
    20041 cgggcgtttt ttcagattgg gcatttcttt tctttttcgc cactgcacga ttgtttgact
    20101 gatgatttcc tgtgtcggca aggtcaaatc cgtagccgtg cataaacgcg tttcaggatg
    20161 caggttttcc accgcatcgg caagcagcgc atcattgcgg taaggcgttt caataaaaat
    20221 ctgcgtctcg ccgcactggc gcgaacgctg ttccaaagcc cgaaaagcct gaatccgctc
    20281 gtttttttca gacggcagat agcctttaaa cgcaaaactc tgcccgttcg cacccgaagc
    20341 catcaaagcc agcagcaggc tggaaggccc gaccagcgga cgcacttcaa aaccgtgttt
    20401 atgcgccaat gccaccaaat tcgcacccgg atcggccaca gccgggcaac ccgcctcact
    20461 gacaatgccc atactgcgcc cttcttgcaa aggtttcagc aattccggca aagtcttcaa
    20521 atccgtatgt tcattcaacg tttgcagatt cagctcgcgg ataggcgtag tcacgcccaa
    20581 atgtttcaaa tgcgcacgcg ccgttttttc cgcctccacg acaaaatccg tcagcccgac
    20641 aatcgcctgt tgttcatgcg gcaacaggca cggcgtgtca ggcgtaccca aaggcgtagg
    20701 aatcaaatac aaaacaggag acatcattcc ctcactcatc ggttaaaaat gccgtctgag
    20761 cctttcagac ggcataaacg ggcagttaca gaacctccac gccctcattt ttcaagaaat
    20821 cgaccagacg gaaaaccggc aaaccgatta aagcattcgg atcggtactc tcaatccttt
    20881 caatcagcaa tgcacccaaa tcctcactct tcagcgcaca cgaacaataa accgcatcag
    20941 gctcgcgctc caaatagcgg aggatatgca actcgtccaa ctgcctcatc acgaccaccg
    21001 tcttatcgat atgccgccgc atcctgcccg taaccgtatt caacagcacg atcgcgctgt
    21061 aaaactcaat ctccctgccg ctcaagtgca tcagcatctt ttgcgcattg gcaaggttca
    21121 tcggcttgcc ccactgcctg ccgtcgcacc acgccacctg gtccgcaccg acaatcaacg
    21181 cctctgggaa acgcccggtc aacgaccgcg ccttaccctc ggcaaggcgc aatgccgtct
    21241 gaggggcgga ttcccccaac atcggcgttt cgtcaaaatc gggggacgcc gcctgaaagg
    21301 caatgccgag cctttccatc tgttcgcggc ggaaaaccga actcgtaccc aaaatcaaag
    21361 gcagttccaa acccatccca tcctccttac cgttgaaaac acgcccgaag gggcagtaaa
    21421 atccagccat gcgccgaaac acggataccc gccttcggcg taccgcaaca tttttcttaa
    21481 aaatattgac gttagaacat ctaaattata tcatatcccg tttatgtcag accctaattt
    21541 gattgacttg gaaatttttg ccgccgaagg gcagaacctg caaggcagtt ttctgctgga
    21601 agaattggat gaacgcgtca gttcgcacga ttatcccgcc gacaggcaga ccaaaatatc
    21661 gtttacactg accggcggtc gcgaccggct gcaacgcctg ttcctcgacc tgaacgtcaa
    21721 agccgatatg cccctgattt gccagagatg tatcaaaccc atgccgttca tgcttgatga
    21781 aagcagccgt atcgtcctgt tttccaacga agagtccttg gacgaatcca tgcttgccga
    21841 cgaagaactc gaaggcatac tgattgaaaa agaactcgac gtgcgcacat tggtagaaga
    21901 ccaaatcctg atgtccctgc ccttttcgcc gcgacacgaa gactgcggcg acaatgggac
    21961 actggaagaa gtcaatcggg acaaacccaa cccctttgct gttttggcag gtttgaaaag
    22021 caattgatta ggacacagtt tatttatcta ggagcttgaa atggccgttc aacaaaacaa
    22081 aaaatcccct tccaaacgcg gtatgcaccg ttcgcacgac gcgctgaccg cgcctgcact
    22141 gtctgtcgac agcacaaccg gcgaagtaca ccgcccgcac cacatctccc ccaacggtat
    22201 gtaccgcggc cgcaaagtgg tcaaagccaa aggcgaataa tccctattcg actgactgaa
    22261 aaagccagaa cattgccatg caattactgg ctttttttgc attggacgca ccatccgtcc
    22321 aaactttcgc catacgtcaa cacacagggg caaagcgttc cgtataatac cccgtgaaaa
    22381 tattccaaaa gccccaacca ccaaggaaat tccgatgaaa cagaaaatct ggtacaccta
    22441 cgatgacatc caccgcgtca tcaaagcatt ggcagaaaaa atccggaacg ccgacatcaa
    22501 atacgatgcc atgattgcca tcggcggcgg cggctttatt ccggcacgta tgctgcgctg
    22561 ttttctggaa attccgattt atgccgtaac caccgcctat tacgacagcg acaacgaagg
    22621 acaggttacc gaagaagtca aaaaagtcca atggctagac cccgtccccg aagccttacg
    22681 gggtaaaaac gtccttgttg tcgacgaagt ggacgacagc cgcgtaacca tggaattttg
    22741 cctgacagag ctgctcaaag aagacttcgg caccatcggc gtcgccgtac tgcacgaaaa
    22801 aatcaaagcc aaagcaggta aaatccccga aggcattccc tatttcagcg gcatcaccgt
    22861 agaagactgg tggatcaact atccgtggga cgcactcgac atcgacgaac acaaccgcct
    22921 tgccgaggcc ggccgaggct gaccctttca gacggcatat tttccgaacc gatgccgtct
    22981 gaagcccgca cgacccctgc cgcagaccga aaacctaccg gagaacccta tgattacact
    23041 tgccgtagat gccatgggcg gcgaccaagg acttgccgtt accgtacccg gcgcaaccgc
    23101 attcctccaa gcacaccccg atgtccgcct gattatgacc ggcgacgaaa cgcaactgcg
    23161 ccaagccctg accgcggcag gcgcaccgat ggaacgcatc gacatctgcc ataccaccca
    23221 agttgtcggc atggatgaat cccctcagtc cgccctaaag aacaaaaaag actcctccat
    23281 gcgcgttgcc atcaaccaag ttaaagaagg caaagcccaa gccgccgtat ccgcaggcaa
    23341 cacgggcgca ctcatggcaa ccgcacgttt cgtcctcaag accatacccg gtatcgaacg
    23401 ccccgccatc gccaaattcc tcccgtccga caccgaccat gttaccctcg ccctcgacct
    23461 tggcgcgaac gtcgactgca cgcccgaaca gctcgcccaa tttgccgtta tcggcagcga
    23521 actcgtccac gcactccatc ctcaaaaagg acagccgcgc gtcgggctgg tcaacgtcgg
    23581 cacggaagac atcaaaggta cggacaccgt caaacaaacc tacaaactgc tgcaaaacag
    23641 caaactcaac tttatcggca acatcgaaag caacggcatc ctgtacggcg aagcagatgt
    23701 cgtcgtcgcc gacggctttg tcggcaacgt catgctcaaa accatcgaag gcgcggtcaa
    23761 attcatgagc ggagccatcc gccgcgaatt ccaaagcaac ctgttcaaca aacttgccgc
    23821 cgttgccgcc ctacccgccc tcaaagggct gaaaaacaaa ctcgatccgc gcaaattcaa
    23881 cggggccatc ctgctcgggc tgcgcggcat cgtcatcaaa agccacggcg gcacagacga
    23941 aaccggtttc cgctacgcac tcgaagaagc ctaccacgaa gccaagtccg ccggcctttc
    24001 caaaatcgaa caaggcgttg ccgaacaact cgccgcactc gaaactgcca aagccgtcca
    24061 aaacgaaaat gccgacggtc tgtaacacac acgatgccgt ctgaacgccc ccgccccttt
    24121 cagacggcat ccgcccgcac caaacctgcg ggcgcggacg gcgatgcgcc tgtccggcac
    24181 ttcccaaata cttccctgta aaataaggag tatttgaaaa atgaagacat tagaaaaacg
    24241 gatgaaagct ctagacaaac agatgatgaa gttcggaaaa tcccttgaag gcaggcttga
    24301 tgcccgtctg attgaatccg cattggatta tattcattat tcggaacgtt ttttggcttt
    24361 tgaaatcctg tgtacttata tcgaagattt cgatgtccgg ctgacggaac aagaatcccg
    24421 ggaaatttct tttatcaaca aggaatttga gatagaaagc acgtccgatt aaccaataaa
    24481 gccaatgggt tgataaacat gaaaacatcg acggtcgttt ttggcggatt ttttatggca
    24541 gacaacggag agcgaatcca aatccccgtt ttggaaaatc ctgacattag ggaaatcaat
    24601 cacttttttt ccgtatcaaa ttttgagaaa aaaaccggcg tccttgtttt cagaatcatc
    24661 cccgagccgg aatttggcaa taccgaatta actgtctatt ttgaaaaagg atattatttg
    24721 ccaatgattc aaacaatttt agaaggcggg gatattgaag tcaaaaacct taaaacggaa
    24781 aattatagtg gaaatacaat ggaaatttgg ggagattcct accctattga gcatatctct
    24841 aaaaatattt ctacaattca aaatataatt tctgaattta tgatacaaaa acaaacaccg
    24901 gcaccaataa tttgatggaa aaccaacaat caaaatgccg tctgaagcat gtttggtttt
    24961 cagacggcat ttccttcgct taaaacagcg tatcggcaac cccgccctgc ctgtccacgg
    25021 caatctgcat ctgaaaacca tctgtatccc aaaccacacc cccatccctg tttccgtcat
    25081 ttgcaccctg cccgtattgg gcaatcatcg gtttttcgct tacaatagcc gaatctgaac
    25141 caactatcca aaaaggccgt tcccatgcag tatgccaaaa tttccggcac gggcagctat
    25201 cttcccgcca accgcgtcag caatgacgac cttgcccaaa aagtggatac ctcggacgag
    25261 tggattaccg cgcgtacggg catcaagttc cgccatattg cagccgaaaa tgagaaaacc
    25321 agcgatcttg ccgccgaagc agcccgccgc gcactggatg cagccggatt agacagcggc
    25381 gaaatcgatt tgattatcgt ggcgacggca acgccggata tgcagtttcc ttctaccgcc
    25441 accatcgtgc agcaaaaatt gggcatcacc aacggctgtc ccgcgtttga cgtacaggca
    25501 gtgtgcgcag gctttatgta cgcgctgacc actgcaaacg cctacatcaa aagcggcatg
    25561 gcaaaaaacg cgctggtcat cggcgcggaa accttcagtc gcattgtaga ctggaacgac
    25621 cgcacaacct gcgtattgtt cggcgacggc gcgggcgcgg tggttttgag cgcggcggac
    25681 aaaccgggca tcatccacag caaactcaaa gccgacggca attatctgaa actcttaaac
    25741 gtccccgggc aaatcgcctg cggcaaagtt tccggttcgc cgtacatttc gatggacggt
    25801 cccggcgtgt tcaagtttgc cgtcaaaatg ctgtccaaaa tcgccgatga cgttatcgaa
    25861 gaagccggtt ataccgccgc tcaaatcgac tggatcgtgc cgcatcaggc aaaccgccgc
    25921 attatcgaat cgaccgcgaa acatttaggt ttgagtatgg acaaagtcgt cctgaccgtc
    25981 caagaccacg gcaacacatc cgccgcatcg attccgctgg ctttggatac gggcatccgc
    26041 agcggacaaa tcaaacgcgg tcaaaacctg ctgctcgaag gcatcggcgg cggtttcgcg
    26101 tggggcgcgg tattgctgca atattgaata ccatgccgtc tgaagcaggt tttcagacgg
    26161 tatttcccat atcatgaagc ggcaggcttt cttcaaacca attgcgtgtg cggcatttct
    26221 gtctgccatt tcgctgcgcc tccccgtatt gggcgcgtgt tacgcaatat tgtccctcta
    26281 tgcgtttgca ctttacggca tcgacaaacg gcgtgccgtg cggggaaaac gccgcattcc
    26341 cgaacaccgc ctgctgctgc ctgccttgtt cggcggttgg gcgggcgcat acttgggcag
    26401 caggatattc aggcataaaa cggcgaaaaa gcgttttgtt gtgctgttcc gtctgactgt
    26461 ttcaggtaat gtcctggcga ccctcatcct gattgattat ttcgttccgc ccgaactttt
    26521 tgtcaaactc gggcaacatc tctgacaatc caaccaaaca aaggaatacc atgtcttttg
    26581 cattcttctt tcccggacaa ggttctcaaa gcctcggcat gatgaacggc tttacagggc
    26641 aggccgtcgt caaaaacaca tttgacgaag catccgccat attgggtcaa gacttgtggg
    26701 cgatgattaa cggtagcgat gccgaaatca tcggtcaaac cgtcaatacc caacccatca
    26761 tgctcgccgc cggcgttgcc gtttaccgcg cctatttgga agcgggcggc aaaacgcctg
    26821 ccgccgttgc cggacacagc ctcggcgaat ataccgcact cgttgccgcc ggcgcattgg
    26881 attttgccga cgcggtcaaa ctcgtgcgcc tgcgcgccga actgatgcag tctgccgtac
    26941 cgcaaggcgt gggcgcaatg gcggcgattc tcggcttgga agatgagcag gtaaaacaaa
    27001 tttgcgccga agccgcccaa ggcgaagtgg tcgaagccgt caacttcaac tcacccggac
    27061 aaatcgtgat tgcaggcaat gccgccgccg tcggacgcgc catggctgcc gccaaagaag
    27121 ccggtgccaa acgcgccctg ccgctgcccg tgtccgtacc ttcccattgc agcctgatga
    27181 aacccgccgc cgacaaactc gccgaagccc tcaaaaccgt cgaaatcaag cagccgcaaa
    27241 tccgcgtcat ccacaacgcc gacgttgccg cctacgatga tgccgacaaa atcaaagacg
    27301 cgctcgtccg ccagctttac agccccgtac gctggacaga aaccgtcaac gcccttgttt
    27361 cagacggcat tgccgaatcc gccgaatgcg gcccgggcaa agtgttggcg ggcttggcaa
    27421 aacgcatcaa caaggccgcc gcgtgcagcg cactgaccga tgccggacag gttgccgcct
    27481 ttatcgaagc gcactgactt cgttccgcaa aaagcagcct gccctcttca ggctgctttt
    27541 cacgtccgaa cggcaaacag ccgcatattt gcgctataat tgatgacgac caaaccaccg
    27601 acagcggctg ccgttgcagt tcccgcccta ccgatatgat agaaaaactg actttcggac
    27661 tgtttaaaaa agaagacgcg cgcagcttta tgcgcctgat ggcgtacgtc cgcccctaca
    27721 aaatccgcat cgttgccgcc ctgattgcca ttttcggcgt tgccgccacc gaaagctacc
    27781 ttgccgcctt catcgccccc ctgattaacc acggcttttc cgcacctgcc gcgccgcccg
    27841 agctgtctgc cgccgccggc atcatttcca ccctgcaaaa ctggcgcgaa cagtttacct
    27901 atatggtttg ggggacggaa aacaaaatct ggaccgtccc cctcttcctc atcatcctcg
    27961 tcgtcatccg tggcatctgc cgctttacca gcacctatct gatgacttgg gtctccgtga
    28021 tgaccatcag caaaatccgc aaagatatgt ttgccaaaat gctgaccctt tcctcccgct
    28081 accatcagga aacgccgtcc ggcaccgtac tgatgaatat gctcaacctg accgaacagt
    28141 cggtcagtaa cgccagcgac atcttcaccg tcctcacgcg cgacacgatg atcgttaccg
    28201 gcctgaccat cgtcctgctt tacctcaact ggcagctcag cctcatcgtt gtcctgatgt
    28261 tccccctgct ctccctgctc tcgcgctact accgcgaccg tctgaagcac gtcatttccg
    28321 actcgcaaaa aagcataggc acgatgaaca acgtgattgc cgaaacccat cagggacacc
    28381 gcgtcgtcaa gctgttcaac gggcaggcgc aggcggcaaa ccggtttgac gcggtcaacc
    28441 gcaccatcgt ccgcctcagc aaaaaaatca cgcaggcaac ggcggcacat tccccgttca
    28501 gcgaactgat tgcctcgatt gccctcgccg ttgtcatctt catcgccctg tggcaaagcc
    28561 aaaacggcta caccaccatc ggcgaattta tggcattcat cgtcgcgatg ctgcaaatgt
    28621 acgcacccat caaaagcctt gccaacatca gcatccctat gcagacgatg ttcctcgccg
    28681 ccgacggcgt atgtgcattt ctcgacaccc cgcccgaaca ggacaaaggc acgctcgcac
    28741 cgcagcgtgt cgaagggcgc atcagcttcc gcaacgtcga tgtcgaatac cgttcggacg
    28801 gcatcaaagc cctcgacggc ttcaacctcg acatcagaca aggcgaacgc gtcgccctgg
    28861 tcggacgttc cggcagcggc aaatccaccg tcgtcaacct gctgccccgc tttgtcgaac
    28921 cgtctgccgg caacatctgc atagacggta tcgacatcgc cgacatcaaa ctcgactgcc
    28981 tgcgcgccca atttgccctc gtctcccaag acgtattcct gtttgacgac accctgtttg
    29041 aaaacgtccg atatagccgt cccgacgcgg gcgaagccga agtcctatcc gccctccaag
    29101 ccgctaacct gcaaagcctg atcgacgcat caccgctcgg actgcaccag cccatcggat
    29161 cgaacggcag caacttatcc ggcggacagc ggcaacgcgt tgccattgcc cgcgccattt
    29221 tgaaagacgc gccgatatta ttattggacg aagccaccag cgcattggac aacgaatccg
    29281 aacgcctcgt ccaacaggcg ctcgaacgcc tgatggaaaa ccgcaccggc atcatcgtcg
    29341 cccaccgcct gaccaccatc gaaggggccg accgcatcat cgtaatggac gacggcaaaa
    29401 tcatcgaaca aggcacacac gaacaactga tgtcccaaaa cggctactac acgatgttac
    29461 gcaatatctc aaacaaagat gccgccgtcc ggacggcata aacaaaatgc cgtctgaaat
    29521 ggtacaatcg ccccgaccct ttcagacggc atcatatccg ccgacccatc cgattatctt
    29581 caatcactgt aaaacccatt atgacccaag acaaaatcct catccttgac ttcggttcgc
    29641 aagttaccca gctcatcgcc cgccgcgtgc gcgaagccca cgtttactgc gagctgcatt
    29701 ccttcgatat gcctttggac gaaatcaaag ccttcaaccc caaaggcatc atcctttccg
    29761 gcggccctaa ttccgtttac gaatccgact atcaagccga taccggtatc tttgacttgg
    29821 gcattccgat tttgggcatt tgctacggca tgcaatttat ggcgcaccac ttgggtggtg
    29881 aagtgcaacc cggcaaccag cgcgaattcg gttacgcgca agtcaaaacc atcgacagcg
    29941 agctgacacg cggcattcaa gacgatacgc caaacacgct cgacgtatgg atgagccacg
    30001 gcgataaagt ttccaaactg cctaccggtt tcaccgtcat cggcgacacg ccgtcctgcc
    30061 cgattgccat gatggaaaac gccgaaaaac aattctacgg catccaattc caccccgaag
    30121 taacccacac caaacaaggc cgcgccctgt tgaaccgctt tgtcttggat atttgcggcg
    30181 cgcaacctag ctggacgatg ccgaactaca tcgaagaagc cgttgccaaa atccgcgaac
    30241 aggtcggcag cgacgaagtg attttgggtt tgtccggcgg cgtggactct tccgtagccg
    30301 ccgcgctgat tcaccgcgcc atcggagacc aactgacctg cgtgttcgtc gatcacggcc
    30361 tcttgcgctt gaacgaaggc aaaatggtga tggatatgtt cgcccgcaat ttgggtgtga
    30421 aagtgattca cgtcgatgcc gaagggcagt ttatggagaa actcgccggc gttaccgatc
    30481 ccgagaaaaa acgcaaaatc atcggtgcgg aatttatcga agtatttgat gctgaagaaa
    30541 aaaaactcac caacgccaaa tggctggcgc aaggcacgat ttaccctgac gtaatcgaat
    30601 ccgcaggcgc gaaaaccaaa aaagcccacg ccatcaaatc ccaccacaat gtcggcggcc
    30661 tgcctgaaaa catgaagctc aagctgcttg agccgttgcg cgatttgttc aaagacgaag
    30721 tgcgcgaact gggcgtggct ttgggtctgc cgcgcgaaat ggtgtaccgc catcccttcc
    30781 ccggtcccgg tttgggcgtg cgcatcttgg gcgaagtgaa aaaagaatac gccgacttat
    30841 tgcgtcaagc agacgatatt tttattcaag aattacgcaa caccaccgac gaaaacggca
    30901 cgtcttggta cgacctgacc agccaagcct tcgccgtgtt cctgcctgtg aaatccgtcg
    30961 gcgtaatggg cgacggacgc acttacgact acgtcgtcgc actgcgcgca gtcatcacca
    31021 gcgactttat gaccgcacat tgggctgagt tgccttactc actgctcgga cgcgtgtcca
    31081 accgcatcat caacgaagtc aaaggcatca accgcgtggt gtacgatgtc agcggcaaac
    31141 cgcctgccac catcgagtgg gaataaccag caaacagggc tgcaccgtcc ggcgcagtct
    31201 ttcgattatc ggaaaaaagg aaaaaatatg agcacacaag atttaagcgg caaaatcgct
    31261 ttggtaacag gcgcctcgcg cggtatcggt gcagcaattg ccgacacact ggcggcagcc
    31321 ggtgccaaag tcatcggtac ggcgaccagt gagagcggtg cggcggcgat tagcgagcgg
    31381 ttggcgcaat ggggcggcga aggccgcgta ttaaattccg ccgaacccga aaccgtcgaa
    31441 aacctgattg ccgacatcga aaaaacgttc ggcaaactcg atattctggt caacaacgcc
    31501 ggcatcaccc gcgacaacct cctgatgcgt atgaaagaag aagagtggga cgacatcatg
    31561 caggtcaacc tcaaatccgt ctttcgcgcc tccaaagccg tcttgcgcgg catgatgaag
    31621 cagcgcgccg gccgtatcat caacatcaca tccgtcgtcg gcgtgatggg caatgccggt
    31681 caaaccaact atgccgcggc aaaagcaggc ttaatcggtt tctccaaatc catggcgcgc
    31741 gaagtcggca gccggggcat taccgtcaac tgcgtcgccc ccggctttat cgataccgac
    31801 atgacccgcg ccctgccgga agaaacccgc caaaccttta ccgcccaaac cgccttgggc
    31861 agattcggcg acgcgcaaga cattgccgat gcagtcttgt tcttggcttc cgatcaggca
    31921 aaatacatta ccggtcaaac gctgcacgtc aacggcggca tgctgatgcc ctgacgggca
    31981 gccgtaccga caatgccgtc tgaagccctt tcagacggca tttgcattct caggcaaaat
    32041 gaacacacgc cacaccccgc cctgcccctg cggatcaggc acaagctgag acctttgcaa
    32101 aattcctttc cctcccgaca gccg
//
LOCUS       DAXHKG010000006        28456 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.006, whole genome shotgun sequence.
ACCESSION   DAXHKG010000006 DAXHKG010000000
VERSION     DAXHKG010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28456
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.006"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            24..1106
                     /gene="mraY"
                     /locus_tag="ACFMWP_000225"
     CDS             24..1106
                     /gene="mraY"
                     /locus_tag="ACFMWP_000225"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HFC5890891.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIASLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYA
                     SGHSQFAQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1221..1493
                     /locus_tag="ACFMWP_000226"
     CDS             1221..1493
                     /locus_tag="ACFMWP_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HFC5890892.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1583..2920
                     /gene="murD"
                     /locus_tag="ACFMWP_000227"
     CDS             1583..2920
                     /gene="murD"
                     /locus_tag="ACFMWP_000227"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HFC5890893.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATKDIPLQGLHN
                     AANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGKKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3046..4371
                     /locus_tag="ACFMWP_000228"
     CDS             3046..4371
                     /locus_tag="ACFMWP_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HFC5890894.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGLLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4375..5442
                     /gene="murG"
                     /locus_tag="ACFMWP_000229"
     CDS             4375..5442
                     /gene="murG"
                     /locus_tag="ACFMWP_000229"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HFC5890895.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRTRGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPVTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDDARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5596..7005
                     /gene="murC"
                     /locus_tag="ACFMWP_000230"
     CDS             5596..7005
                     /gene="murC"
                     /locus_tag="ACFMWP_000230"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HFC5890896.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7118..8032
                     /locus_tag="ACFMWP_000231"
     CDS             7118..8032
                     /locus_tag="ACFMWP_000231"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HFC5890897.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRNDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAESCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8022..8750
                     /locus_tag="ACFMWP_000232"
     CDS             8022..8750
                     /locus_tag="ACFMWP_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HFC5890898.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8836..10080
                     /gene="ftsA"
                     /locus_tag="ACFMWP_000233"
     CDS             8836..10080
                     /gene="ftsA"
                     /locus_tag="ACFMWP_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HFC5890899.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            10199..11377
                     /gene="ftsZ"
                     /locus_tag="ACFMWP_000234"
     CDS             10199..11377
                     /gene="ftsZ"
                     /locus_tag="ACFMWP_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HFC5890900.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11516..12826
                     /locus_tag="ACFMWP_000235"
     CDS             11516..12826
                     /locus_tag="ACFMWP_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HFC5890901.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13452..14327
                     /gene="prpB"
                     /locus_tag="ACFMWP_000236"
     CDS             13452..14327
                     /gene="prpB"
                     /locus_tag="ACFMWP_000236"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HFC5890902.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14413..15567
                     /gene="prpC"
                     /locus_tag="ACFMWP_000237"
     CDS             14413..15567
                     /gene="prpC"
                     /locus_tag="ACFMWP_000237"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HFC5890903.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            15660..16382
                     /locus_tag="ACFMWP_000238"
     CDS             15660..16382
                     /locus_tag="ACFMWP_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HFC5890904.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQDIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINSVLLRRSVADRLTQVVSLLPEVYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            16408..17613
                     /locus_tag="ACFMWP_000239"
     CDS             16408..17613
                     /locus_tag="ACFMWP_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HFC5890905.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            17716..20322
                     /gene="acnD"
                     /locus_tag="ACFMWP_000240"
     CDS             17716..20322
                     /gene="acnD"
                     /locus_tag="ACFMWP_000240"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HFC5890906.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELNGKRKAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATVDLAAKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRFGLKRKPWVKTSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRVHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLSGMRPLAILPDNITTDHLSPSNAILASSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVRNEDGSVRQGSLARVEPEGQTMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVVGERKPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            20675..21844
                     /gene="prpF"
                     /locus_tag="ACFMWP_000241"
     CDS             20675..21844
                     /gene="prpF"
                     /locus_tag="ACFMWP_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HFC5890907.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRMPEDCF"
     gene            22258..23457
                     /locus_tag="ACFMWP_000242"
     CDS             22258..23457
                     /locus_tag="ACFMWP_000242"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC5890908.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            23565..24185
                     /locus_tag="ACFMWP_000243"
     CDS             23565..24185
                     /locus_tag="ACFMWP_000243"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC5890909.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(24312..24755)
                     /locus_tag="ACFMWP_000244"
     CDS             complement(24312..24755)
                     /locus_tag="ACFMWP_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HFC5890910.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            24929..25297
                     /locus_tag="ACFMWP_000245"
     CDS             24929..25297
                     /locus_tag="ACFMWP_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC5890911.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            25342..26496
                     /locus_tag="ACFMWP_000246"
     CDS             25342..26496
                     /locus_tag="ACFMWP_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC5890912.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKSVPFAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(26553..27425)
                     /locus_tag="ACFMWP_000247"
     CDS             complement(26553..27425)
                     /locus_tag="ACFMWP_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HFC5890913.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVEELWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICIANKDSLLQLVQGLGKQLDVLADILTADDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            27510..28322
                     /locus_tag="ACFMWP_000248"
     CDS             27510..28322
                     /locus_tag="ACFMWP_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HFC5890914.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGDVPHLSAEGVSVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         6557 a         7234 c         7905 g         6760 t
ORIGIN      
        1 acaaaacaaa aaaaggaagc cccatgtttt tatggctcgc acatttcagc aactggttaa
       61 ccggtctgaa tatttttcaa tacaccacat tccgcgccgt catggcggcg ttgaccgcct
      121 tagcgttttc cctgatgttc ggcccgtgga cgatacgcag gctgaccgcg ctcaaatgcg
      181 ggcaggcagt gcgtaccgac ggtccgcaaa cccacctcgt caaaaacggc acgccgacga
      241 tgggcggttc gctgattctg accgccatta ccgtgtccac cctgttgtgg ggcaactggg
      301 caaacccgta tatctggatt ctcttgggcg tattgctcgc cacgggcgca ctcggttttt
      361 acgacgactg gcgcaaagtc gtctataaag accccaacgg cgtgtccgcc aaattcaaaa
      421 tggtgtggca gtcaagcgtt gccattatcg ccagtttggc attgttttac cttgccgcca
      481 attccgccaa caatattttg attgtcccgt tcttcaaaca aatcgccctg ccgctgggcg
      541 tggtcggctt tttggtgttg tcttacctga ccatcgtcgg cacatccaat gccgtcaacc
      601 tcaccgacgg cttggacggc cttgcgacct tccccgtcgt cctcgttgcc gccggcctcg
      661 ccatcttcgc ctatgccagc ggccactcac aatttgccca atacctgcaa ttaccttacg
      721 ttgccggcgc aaacgaagtg gtgattttct gtaccgccat gtgcggcgcg tgcctcggtt
      781 tcttgtggtt taacgcctat cccgcgcaag tctttatggg cgatgtcggt gcattggcat
      841 tgggtgccgc gctcggtacc gtcgccgtca tcgtccgcca agagtttgtc ctcgtcatta
      901 tgggcggatt atttgtcgta gaagccgtat ccgttatgct tcaggttggc tggtataaga
      961 aaaccaaaaa acgcatcttc ctgatggcgc ccatccatca ccactacgaa caaaaaggct
     1021 ggaaagaaac ccaagtcgtc gtccgctttt ggattattac catcgtcttg gtgttgatcg
     1081 gtttgagtac cctcaaaatc cgctgaacct atgccgtctg aacacctttc agacggcatt
     1141 tgaacgcgca ataaacctgc ggcgacaatc cgcccagccc tatcgttaac ggcggcttat
     1201 actaaaacag aagtaaaacc atgaaacaga cagtcaaatg gcttgccgcc gccctgattg
     1261 ccttgggctt gaaccaagcg gtgtgggcgg atgacgtatc ggattttcgg gaaaacttgc
     1321 aggcggcagc acagggaaat gcagcagccc aatacaattt gggcgcaatg tattacaaag
     1381 gacgcggcgt gcgccaagac cttgtgctcg ctcaagaatg gtttggtaag gcttgtcaaa
     1441 acggagacca agacggctgc gacatttacc aacgcctgaa ggcaggttat tgaacagccc
     1501 gcgatgccgt ctgaaagcgg cttgggcagg ggcggacatc cccccacctg cccaatatga
     1561 tttgttttag gacaaaacca aaatgacgct tgaaaacaaa aaaatcctcg tcgccggact
     1621 cggcggtacg ggtatttcca tgattgccta tctgcgcaaa aacggcgcgg aggtggccgc
     1681 ttatgatgcg gagttgaagc ccgagcgcgt gtcgcaaatc ggtaagatgt ttgacgggct
     1741 ggtgttttac acaggccgtc tgaaagatgc gctggacaac ggtttcgata ttttggcact
     1801 cagccccggc atcagcgagc gtcagccgga tattgaggcg ttcaagcaaa acggcggacg
     1861 cgtgttgggc gacatcgaat tgctggcgga cattgtgaac cgccggggcg acaaggtaat
     1921 tgcgattacc ggcagcaacg gcaaaaccac ggtaacgagc ctggtcggct atctctgtat
     1981 caagtgcggg ctggataccg ttatcgcggg caatatcggc acgccggttt tggaggcgga
     2041 atggcagcgc gaaggcaaaa aggcggacgt gtgggtgttg gagctttcca gcttccaact
     2101 ggaaaacacc gaaagcctgc gcccgacggc ggcgacggta ctgaatattt ccgaagacca
     2161 tctcgaccgc tacgacgact tgctcgacta cgcgcatacc aaagccaaga ttttccgtgg
     2221 cgacggtgtg caggttttga atgcggacga tgcgttctgc cgtgccatga aacgtgccgg
     2281 gcgcgaggta aaatggtttt cgttggaaca cgaagccgat ttttggttgg aacgtgagac
     2341 aggccgcctg aaacaaggca atgaagattt gattgccacg aaagacattc cgttgcaagg
     2401 cttgcacaac gccgccaacg tcatggctgc cgtggctttg tgcgaagccg tcggtttgcc
     2461 gcgcgaagca ttgcttgaac acgtcaaaac cttccaaggc ctgccgcacc gcgtggaaaa
     2521 aatcggcaag aaaaacggcg tggtattcat tgatgacagc aaaggcacga atgtcggcgc
     2581 gaccgccgcc gcgattgccg gtttgcaaaa tccgctcttc gtgattttag gcggcatggg
     2641 caaagggcag gacttcacgc ctctgcgcga cgcgcttgcc ggcaaggcaa aaggcgtgtt
     2701 cctgatcggc gttgatgcgc cgcaaatccg ccgcgatttg gacggctgcg gtctgaatat
     2761 gaccgactgc gccactttgg aagaagccgt tcagacggca tatgcccaag ccgaagcgtg
     2821 cgatatcgtg ctgctcagcc cggcttgtgc gagttttgat atgtttaaag gctacgcgca
     2881 ccgttcggaa gtgtttatcg aagcgtttaa ggctttgtga tgccgtctga aatgcaaacg
     2941 ccgtcattgt tgggcggcaa gtaaagattt agaataccga tttgggatgt atcgtatgtt
     3001 cggacggcat tgtctgccgt ctgaaatttt tgccctttgc ggcaggtgca aacagactgg
     3061 caggtggttt ttttgaagat ttcggaagta ttggtaaaag tgggcgacgg tgtccacact
     3121 ctgctgctcg acaggccgat tgtgcgcgac ggcaggaaat tcgacgcgcc gcttttgtgg
     3181 atggtggtgc tgatgacggc gttcagcctg ctgatgattt attcggcttc tgtgtatttg
     3241 gcatcaaaag aaggcggcga tcagtttttc tatttgacca gacaggcggg gttcgtcgtt
     3301 gccggcttga tagcgagcgg tttgttatgg tttctttgca ggatgaggac atggcggcgg
     3361 cttgtgccgt ggatttttgc cctatccggc ctgttgctgg tagtcgtatt gattgccggg
     3421 cgcgaaatca atggcgcgac ccgttggata cctttgggtc cgttgaattt ccagccgacc
     3481 gagctgttca agctggcggt catcctttat ttggcaagcc tgttcacgcg ccgtgaagaa
     3541 gtgttgcgca gcatggaaag tttgggttgg cagtcgattt ggcgggggac ggccaatctg
     3601 atcatgtccg ccaccaatcc gcaggcacgt cgtgaaacat tagaaatgta cggccgtttc
     3661 cgggcgatca tcctgccgat tatgctggtg gcgttcggtt tggtgctgat aatggtacag
     3721 ccggatttcg gttcgtttgt cgtcattacc gtcattgccg ttggaatgct gtttttggca
     3781 ggattgccgt ggaaatattt tttcgtcctg gtaggcagcg tcttgggcgg gatggtgctg
     3841 atgattaccg ccgctcccta ccgtgtgcag cgggtagtgg catttttgga cccgtggaaa
     3901 gacccgcagg gtgccggcta ccagcttacc cactctctga tggcaatcgg gcgcggagag
     3961 tggttcggta tgggtttggg tgcgagtttg agcaaacgcg gctttctgcc ggaagcgcat
     4021 accgatttta tttttgccat catcgccgaa gaattcggtt tcttcggtat gtgcgtgctg
     4081 atattctgtt acggctggct ggtggtgcgg gcgttttcca tcggcaagca gtcgcgcgat
     4141 ttgggtttga ctttcaacgc ctatatcgct tcgggtatcg gcatttggat cggtatccaa
     4201 agtttcttca atatcggtgt gaacatcggt gctttgccga ccaaaggtct gacgctgccg
     4261 ttgatgtcct atggcggttc gtcagtcttt ttcatgctga tcagcatgat gctgctgttg
     4321 cgtatagatt atgaaaaccg ccggaaaatg cgcggttatc gggtggagta aatcatgggc
     4381 ggtaaaacct ttatgctgat ggcgggcgga acgggcggac atattttccc cgcgctggcg
     4441 gtggcggatt cattgcgcac gcgcggccat catgtgattt ggctgggcag caaggattcg
     4501 atggaagagc gtatcgtgcc gcaatacggc atacgcttgg aaacgctggc gattaaaggc
     4561 gtgcgcggca acggcatcaa acgcaaactg atgctgccgg ttactttgta tcaaaccgtc
     4621 cgcgaagcgc agcggattat ccgcaaacac cgtgtcgagt gcgtcatcgg cttcggcggc
     4681 ttcgttacct ttcccggcgg tctggcagcg aaactcttgg gcgtgccgat tgtgattcac
     4741 gagcaaaacg ccgtggcagg cttgtccaac cgccacctgt cgcgctgggc gaagcgggtg
     4801 ttgtacgctt ttccgaaagc gttcagccac gaaggcggct tggtcggcaa ccccgtccgc
     4861 gccgatatta gcaacctgcc cgtgcctgcc gaacgcttcc aagggcgtga aggccgtctg
     4921 aaaattttgg tggtcggcgg cagtttgggc gcggacgttt tgaacaaaac cgtaccgcag
     4981 gcattggctt tgctgcccga cgatgcgcgt ccgcagatgt accaccaatc gggacggggc
     5041 aagctgggca gcttgcaggc ggattacgac gcgctgggcg tgaaagccga atgcgtggaa
     5101 tttattaccg acatggtgtc cgcctaccgc gatgccgatt tggtgatttg ccgtgccggc
     5161 gcgctgacga ttgccgagtt gacggcggcg ggattgggtg cgttgctcgt tccgtacccc
     5221 cacgcggttg acgatcacca aaccgccaac gcgcgtttta tggtgcaggc agaagcagga
     5281 ctgctgttgc cgcaaaccca gttgacggcg gaaaaactcg ccgaaatcct cggcagcctg
     5341 aaccgcgaaa aatgtctcaa atgggcagaa aacgcccgta ctttggcatt gccgcacagc
     5401 gcggacgacg ttgccgaagc cgcgattgcg tgtgcggcgt aaactgccga accatgccgt
     5461 ctgaaaagcc gttcagacgg catggatgtt ttttatttca atccgctata tatttgtcag
     5521 aaaactatgg cgcgcaaacg gtcagccctt taaaataacg cctttacgca tcgaaatcca
     5581 ccggaacgca acattatgat gaaaaatcga gtgaccaaca tccattttgt cggtatcggc
     5641 ggcgtcggca tgagcggtat cgccgaagtc ttgcacaatt tgggttttaa agtttccggt
     5701 tcggatcagg cgcgaaatgc cgctaccgag catttgggca gcctgggcat tcaagtttat
     5761 cccggccata ccgcagaaca cgttaacggt gcggatgtcg tcgttacctc taccgccgtc
     5821 aaaaaagaaa atcccgaagt tgtcgctgcg ttggagcagc aaattcccgt tattccgcgc
     5881 gccctgatgt tggcggagtt gatgcgcttc cgtgacggca tcgccattgc cggcacgcac
     5941 ggcaaaacca cgaccaccag cctgaccgcc tccatcctcg gcgcggcagg acttgacccg
     6001 actttcgtta tcggcggcaa actcaacgcc gcaggcacca acgcccgctt gggcaaaggc
     6061 gaatacatcg ttgccgaagc cgacgagtcg gatgcatcct ttctgcacct gacaccgatt
     6121 atgtccgtcg ttaccaatat cgacgaagac catatggata cctacgggca cagcgtcgaa
     6181 aaactgcatc aggcgtttat cgatttcatc caccgtatgc ccttctacgg caaagccttt
     6241 ttgtgtattg acagcgaaca cgtccgcgcg attttgccca aagtgagcaa accttatgct
     6301 acttacggtt tggacgatac cgccgacatc tacgccaccg acatcgaaaa cgtcggcgcg
     6361 caaatgaaat tcaccgtcca tgttcaaatg aaaggacatg agcaggggtc gtttgaagtc
     6421 gtgctgaata tgcccggcag acacaacgtg ctgaacgcat tggcagccat cggcgtggcg
     6481 ctggaagtcg gcgcatcggt tgaagcgatc caaaaaggct tgctcggctt tgaaggtgtc
     6541 ggccgccgct tccaaaaata cggcgacatc aagttgccaa acggcgggac cgcgctcttg
     6601 gtggacgact acggacacca ccccgtcgaa atggcggcga cccttgccgc cgcacgcggc
     6661 gcgtatccgg aaaaacgttt ggtactcgcc ttccagccgc accgctatac ccgcacgcgc
     6721 gatttgtttg aagactttac caaagtcctc aataccgttg acgcgctggt gctgaccgaa
     6781 gtttatgccg ccggtgaaga gccgattgcc gccgccgatt cccgcgctct tgcccgcgcc
     6841 atccgcgtgt tgggcaaact cgagccgatt tactgcgaaa acgttgccga tctgcccgaa
     6901 atgctgttga acgttttgca ggacggcgac atcgtgttga atatgggtgc gggaagcatc
     6961 aaccgcgtcc ccgccgcgct gctggaattg tcgaaacaga tttgaggcac acccgcctga
     7021 cagacggaac atcatataaa ggtcgtctga aaccgcaaat caggtttcag acgacctctg
     7081 gcaacaagca taaagcaatc aggaaagaac aaaaacaatg cagaattttg gcaaagtggc
     7141 cgtattgatg ggcggttttt ccagcgaacg agaaatctcg ctggacagcg gcaccgccat
     7201 tttgaatgct ttaaaaagca aaggcataga cgcatatgcc ttcgatccta aagaaacccc
     7261 attgtctgaa ttgaaggcac aaggttttca gacggcattc aacatccttc acggtactta
     7321 cggcgaagac ggggcggttc agggtgcatt ggaactgttg ggcattccct ataccggcag
     7381 cggtgtcgcc gcatccgcca tcggcatgga caaataccgc tgcaaactga tttggcaggc
     7441 attgggactg cccgttcccg agttcgccgt cctgcacgac gacactgatt tcgatgccgt
     7501 cgaagaaaaa ttgggcctgc cgatgtttgt gaaaccggcg gccgaaggca gcagcgtagg
     7561 cgtggtaaaa gtcaaaggaa aaggccgtct gaaaagcgtt tacgaagaat tgaaacacct
     7621 tcagggcgaa atcattgccg aacggtttat cggcggcggc gaatattcct gccccgtctt
     7681 gaacggcaaa ggcctgcccg gcatacacat catccccgcg accgagtttt atgactacga
     7741 agccaagtac aaccgcaacg acaccattta tcaatgtcct tcggaagatc tgaccgaagc
     7801 cgaagaaagc ctgatgcgcg aactggcggt tcgcggcgcg caggcaatcg gtgcggaaag
     7861 ctgcgtgcgc gtcgatttcc tcaaagatac cgacggcaaa ctctatctgt tggaaatcaa
     7921 caccctgccc ggtatgacga gccatagttt agtaccgaaa tccgctgccg ttacgggcgt
     7981 gggttttgcc gatttatgta ttgaaatttt gaagaccgca catgtgggat aatgccgaag
     8041 cgatggaacg gctgacgcgc tggctgcttg tcatgatggc gatgctgctt gctgcgtccg
     8101 ggctggtttg gttttacaat tcgaatcatc tgcccgtcaa gcaggtgtcg ctgaagggca
     8161 acctggttta ttccgataag aaggcattgg gcagtttggc gaaagaatac atccatggga
     8221 atattttgag gacggacatc aatggcgcac aggaggccta ccgccggtat ccgtggattg
     8281 cgtcggtcat ggtgcgccgc cgttttcccg acacggttga ggtcgtcctg accgagcgca
     8341 agccggtcgc gcgttggggc gaccatgcct tggtggacgg cgaaggcaat gtttttgaag
     8401 cccgcttgga cagacccgga atgccggtat tcagaggcgc ggaaggaacg tctgccgaaa
     8461 tgctccgccg ttatgacgaa ttttcgactg ttttggcaaa acagggtttg ggcatcaaag
     8521 agatgaccta tacggcacgt tcggcgtgga ttgtcgtttt ggacaacggc atcaccgtca
     8581 ggctcggacg ggaaaacgag atgaaacgcc tccggctttt taccgaagcg tggcagcatc
     8641 tgttgcgtaa aaataaaaat cggttatcct atgtggatat gaggtataag gacggatttt
     8701 cagtccgcta tgcttccgac ggtttacccg aaaaagaatc cgaagaatag tgggaacagg
     8761 tatcggacag attacgaccg tgccgtctga aacggtgcga cgcaaatttc aatcagtttt
     8821 aagagcagac gaacaatgga acagcagcaa agatacatca gcgtactgga tatcggtacg
     8881 tctaaagtcc tcgcactgat cggggaagtt caagatgacg acaaaatcaa catcgtcggt
     8941 ttggggcagg ctccttcacg gggcttgcgc gcgggcatgg taaccaatat cgatgccacc
     9001 gtccaagcca tcaggcaggc ggtcaatgat gccgagctga tggcggatac caaaattacc
     9061 cacgttacca caggtatcgc aggcaaccac atccgcagtc tcaattcgca aggtgtggtt
     9121 aaaattaaag acggggaagt cacgcaggca gacatcgacc gcgccattga aacggcaaag
     9181 gcaatcaata tcccgcccga tcaaaaaatt ctcgatgccg tggttcaaga ctacattatc
     9241 gacacccaac ttggcgtgag ggagcccatc ggtatgagcg gtgtgcgtct ggatacgcgg
     9301 gtgcacatca ttaccggtgc aagtacggca gtgcagaatg tccaaaaatg tatcgagcgg
     9361 tgcggtttga aaagcgatca gatcatgctt cagccgttgg caagcgggca ggcggtgctg
     9421 actgaagatg aaaaagacct cggcgtatgc gtcatcgaca ttggtggcgg aacgaccgat
     9481 attgccgttt atatgaacgg tgccatccgc catacgtccg tcattccggc cggtggtaat
     9541 ctgattacca aagatttgtc caaatcgttg agaacacctc tcgatgccgc cgagtacatt
     9601 aaaatccatt atggcgtggc atcatgcgat acggaaggct tgggtgagat gattgaagtt
     9661 ccgggcgtgg gtgaccggac atcgcgtcag gtttccagta aggttttggc agcaatcatc
     9721 agcgcacgta ttcaggagat ttttggcgta gtgctgggcg agctgcaaaa atcgggtttc
     9781 cccaaagaag tgctgaatgc gggtatcgtt ctgaccggcg gtgtgtccat gatgaccggg
     9841 attgtggaat ttgccgaaaa aatcttcgat ttgcctgtac gcaccggtgc gccccaagaa
     9901 atgggcggtt tgtccgaccg cgtccgcaca ccgcgctttt ctaccgccat cgggctgctt
     9961 catgcagcat gcaagctgga aggaaacttg ccgcagccgg aaaacggtgc agtgcaagag
    10021 agggaagggg gcggcggttt gttggcaaga ttgaaacggt ggattgaaaa cagcttctga
    10081 acaggtggat tgccgtttga caggtgagaa gtattttgcc agcagcaaga tacttcttat
    10141 ataatgaata ataatttatt taaaccgtcc tctgaatggg gcgagcagga gtttttgaat
    10201 ggaatttgtt tacgacgtgg cagaatcggc agtcagccct gcggtgatta aagtaatcgg
    10261 cttgggcggc ggcggttgca atgcaatcaa taacatggtt gccaacaatg tgcgcggtgt
    10321 ggagtttatc agtgccaata cggatgcgca gtctttggca aaaaaccatg cggcgaagag
    10381 aatccagttg ggtacgaatc tgacacgcgg tttgggcgcg ggcgcgaatc ccgatatcgg
    10441 ccgtgcggca gcccaggaag accgggaagc cattgaagaa gccattcgcg gtgcgaatat
    10501 gctgtttatc acgaccggta tgggcggcgg taccggtacc ggttccgcgc cggttgttgc
    10561 tgagattgcc aagtctttgg gcattctgac cgttgccgtg gttacccgac cgttcgcata
    10621 tgaaggtaag cgcgtccatg tcgcacaggc agggttggaa cagttgaaag aacacgtcga
    10681 ttcgctgatc atcatcccga acgacaaact gatgactgca ttgggtgaag acgtaacgat
    10741 gcgcgaagcc ttccgtgccg ccgacaatgt attgcgcgat gcggtcgcag gcatttccga
    10801 agtggtaact tgcccgagcg aaatcatcaa cctcgacttt gccgacgtga aaaccgtgat
    10861 gagcaaccgc ggtatcgcta tgatgggttc gggttatgcc caaggtatcg accgtgcgcg
    10921 tatggcgacc gaccaggcca tttccagtcc gctgctggac gatgtaacct tggacggagc
    10981 gcgcggtgtg ctggtcaata ttacgactgc tccgggttgc ttgaaaatgt ccgagttgtc
    11041 cgaagtcatg aaaatcgtca accaaagcgc gcatcccgat ttggaatgca aattcggtgc
    11101 ggctgaagac gagaccatga gcgaagatgc catccggatt accattatcg ctaccggtct
    11161 gaaagaaaaa ggcgcggtcg attttgttcc ggcaagggag gtagaagcgg ttgctccgtc
    11221 caaacaggag caaagccaca atgtcgaagg tatgatccgc accaatcgcg gtatccgcac
    11281 gatgaacctt accgctgcgg atttcgacaa tcagtccgta cttgacgact ttgaaatccc
    11341 tgcgattttg cgtcgtcaac acaattcaga caaataatgt gctgtttgcc cgtaaacctg
    11401 ctgcctcccg aatcggtttg tccggtttgg gaggtatgtt tttcaagatg ttgcaatttc
    11461 gtacggtttg cggtcggcgg attcagattt ttccacttga tacagacttt cagatatgga
    11521 cacttcaaaa caaacactgt tggacgggat ttttaagctg aaggcaaacg gtacgacggt
    11581 gcgtaccgag ttgatggcgg gtttgacaac ttttttgacg atgtgctaca tcgttatcgt
    11641 caaccctctg attttgggcg agaccggcat ggatatgggg gcggtattcg tcgctacctg
    11701 tatcgcgtct gccatcggct gttttgttat gggttttgtc ggcaactatc cgattgcact
    11761 cgcaccgggg atggggctga atgcctattt cacctttgcc gtcgttaagg gtatgggcgt
    11821 gccttggcag gttgcgttgg gtgcggtgtt catctccggt ctgattttta tcctgttcag
    11881 cttttttaaa gtcagggaaa tgctggtcaa cgcactgcct atgggtttga aaatgtcgat
    11941 tgctgccggt atcggtttgt ttttggcact gatttccctg aaaggcgcag gcattatcgt
    12001 tgccaatccg gcaaccttgg tcggtttggg cgatattcat cagccgtccg cgttgttggc
    12061 actgttcggt tttgctatgg tggtcgtatt gggacatttc cgcgttcaag gcgcaatcat
    12121 catcaccatc ttgaccatta ccgtcattgc cagcctgatg ggtttgaatg aatttcacgg
    12181 catcatcggc gaagtaccga gcattgcgcc gacttttatg cagatggatt ttgaaggcct
    12241 gtttaccgtc agcatggtca gtgtgatttt cgtcttcttc ttggtcgatc tatttgacag
    12301 taccggaacg ctggtcggca tatcccaccg tgccgggctg ctggtggacg gtaagctgcc
    12361 ccgcctgaaa cgcgcactgc ttgcagactc taccgccatt gtggcaggtg cggctttggg
    12421 tacttcttcc accacgcctt atgtggaaag cgcggcgggc gtatcggcag gcggacggac
    12481 cggcctgacg gcggttacag tcggcgtatt gatgctcgcc tgcctgatgt tttcaccttt
    12541 ggcgaaaagt gttcccgctt ttgccaccgc gcccgccctg ctttatgtcg gcacgcagat
    12601 gctccgcagt gcgagggata ttgattggga cgatatgacg gaagccgcac ccgcattcct
    12661 gaccattgtc ttcatgccgt ttacctattc gattgcagac ggcatcgcct tcggcttcat
    12721 cagctatgcc gtggttaaac ttttatgccg ccgcaccaaa gacgttccgc ctatggtatg
    12781 gattgttgcc gtattgtggg cactgaaatt ctggtatttg ggctgattga ttcgatatta
    12841 aaaatgccgt ctgaaaggtt ttcagacggc attttgtttg ccgatatatt taatttttat
    12901 taaattatat aaaaatcaaa tacataataa aatacatcgg attgcttaaa aataatacat
    12961 tgtttttatg tataaaatat tttataagtt ttcaggattt tgattatcga aaatttttct
    13021 tgatttcctg acaattttat tgaaacaaat aattcaaaat taatctagtt taatcatgga
    13081 attaaaataa aatattaaaa ttatgtaatg agtctcctta aaaatgtttg acattttcag
    13141 tcttgtgttt tagattatcg aaaaataaaa ctacataaca ctacaaagga acattactat
    13201 gaaaccaatt cagatgtttt ccccttttct gaataatccc cttgttttct tcttgtctgc
    13261 ggttttgccg cataattccg aacggtctgc tgtttttctt tgattcgttt taaatatcaa
    13321 taagataatt tttcccatat atttttaatg attggattgg gatgcccgac gcgtcggatg
    13381 gctgtgtttt gccgtccgaa tgtgatggaa gcctgtccat actgaaaaaa agtctataaa
    13441 ggagaaatat gatgagtcaa cactctgccg gagcacgttt ccgccaagcc gtgaaagaat
    13501 cgaatccgct tgccgtcgcc ggttgcgtca atgcttattt tgcacgattg gccacccaaa
    13561 gcggtttcaa agccatctat ctgtccggcg gcggcgtggc agcctgttct tgcggtatcc
    13621 ctgatttggg cattaccaca atggaagatg tgctgatcga cgcacgacgc attacggaca
    13681 acgtggatac gcctctgctg gtggacatcg atgtgggttg gggcggtgca ttcaatattg
    13741 cccgtaccat tcgcaacttt gaacgcgccg gtgttgcagc ggttcacatc gaagatcagg
    13801 tagcgcaaaa acgctgcggc caccgtccga acaaagccat tgtatctaaa gatgaaatgg
    13861 tcgaccgtat caaagctgcc gtagatgcgc gcgttgatga gaacttcgtg attatggcgc
    13921 gtaccgatgc gctggcggta gaaggtttgg atgccgctat cgaacgcgcc caagcttgtg
    13981 tcgaagccgg tgcggacatg attttccctg aagccatgac cgatttgaac atgtaccgcc
    14041 aatttgcaga tgcggtgaaa gtgcccgtgt tggcgaacat taccgagttt ggttccactc
    14101 cgctttatac ccaaagcgag ctggctgaaa acggcgtgtc gctggtgctg tatccgctgt
    14161 catcgttccg tgcagcaagc aaagccgctc tgaatgttta cgaagcgatt atgcgcgatg
    14221 gcactcaggc ggcggtggtg gacagtatgc aaacccgtgc cgagctgtac gagcatctga
    14281 actatcatgc cttcgagcaa aaactggata aattgtttca aaaatgattt accgctttca
    14341 gacggtcttt caacaaatcc gcatcggtcg tctgaaaacc cgaaacccat aaaaacacaa
    14401 aggagaaata ccatgactga aactactcaa accccgacct tcaaacctaa gaaatccgtt
    14461 gcgctttcag gcgttgcggc cggtaatacc gctttgtgta ccgttggccg taccggcaac
    14521 gatttgagct atcgcggtta cgacatcttg gatttggcac aaaaatgcga gtttgaagaa
    14581 gtcgcccacc tgctgattca cggtcatctg cccaacaaat tcgagctggc cgcttataaa
    14641 accaagctca aatccatgcg cggcctgcct atccgtgtga ttaaagtttt ggaaagcctg
    14701 cctgcacata cccatccgat ggacgtaatg cgtaccggcg tatccatgct gggctgcgtt
    14761 catcctgaac gtgaaagcca tccggaaagt gaagcgcgcg acatcgccga caaactgatc
    14821 gccagcctcg gcagcatcct cttgtactgg tatcaatatt cgcacaacgg caaacgcatt
    14881 gaggttgaaa gcgacgaaga gaccatcggc ggtcatttcc tgcaactgtt gcacggcaaa
    14941 cgcccaagcg aatcacacat caaagccatg cacgtttcac tgattctgta tgccgaacac
    15001 gagttcaacg cttctacctt taccgcccgc gtgatcgccg gtacaggctc tgatatgtac
    15061 tccagcatta ccggagcaat cggcgcgttg aaaggtccga aacacggcgg cgcgaacgaa
    15121 gtggcttacg atattcaaaa acgctaccgc aatgccgacg aagctgaagc cgacatccgc
    15181 gaacgcatcg gccgcaaaga aatcgtgatc ggtttcggtc atccggtgta taccatttcc
    15241 gacccccgca acgttgtcat taaagaagtg gcacgcggtt tgagcaaaga aaccggcgat
    15301 atgcgcctct ttgacattgc cgaacgtttg gaaagcgtga tgtgggaaga gaaaaaaatg
    15361 ttcccgaatc tggactggtt ctctgccgtt tcctaccaaa aattgggcgt accgaccgct
    15421 atgttcacac cgctgttcgt aatttcccgt acaaccggtt ggagcgcaca cgttcttgag
    15481 caacgcaaag acggcaaaat catccgtccg agcgcaaact acacgggccc tgaagatttg
    15541 gcgtttgtgg agattgaaga acgctgatga ttttcagacg accttgtttg tacaaggtcg
    15601 tctgaaaaaa gaaatttaat gaatttattg gcacactaat tattaatgcg gaacatttga
    15661 tggataagga caaggggtct tatgcgggta ttcctgtaca aaataccaaa gagttagttt
    15721 ggcagaaaat acaagacata cctatttctg aatgtgggga accgttggtc agtgttggta
    15781 ataccggacg cattcgtgtc aatcctgttt atttttctca gggtattgaa ggggcgataa
    15841 atagtgtttt attgcgtaga agtgttgctg ataggctgac tcaggttgtc tctttgctgc
    15901 cggaagtgta cgggttggaa atttttgatg gttggcgtcc tgtcatagtg caaagagcat
    15961 tacgagaaaa tatgaagcaa gaaattgaaa aacgccatcc ggaatatgat gaagttcaag
    16021 ttagagaagc actggactgt tttgctgctg atccagatcg ggcaggaatg cctctgcccc
    16081 atttgacagg cggatctgtt gatgtcggat tgtttgatat aaaaagtggc aaaagtttgg
    16141 atatgggaag tgagtttgat gcaactggac atttatctta tagcgatgct ttagagaaag
    16201 aaggtgagta tttctcctct gctcgtaatt tacgccggat tttgattcat gcgatgaaag
    16261 aggcaggatt tagtaatttg ccaaccgaat ggtggcattt cgattatggc aaccaaaatt
    16321 gggcttattt tacccaacaa agcaacgcag tttttggggc ggtagaagag caggatactt
    16381 aaattaaaat aaaaattggg aggaaaaatg caaactttaa tttcagcaga taatcatttg
    16441 ctgctgtggg cttttgttat gttagctgcc gctgctgcga tttttattga gcaaaacagt
    16501 cgcttggctg ggaaagtccc tggtgcagta ttagctttat tgattgcgtt gattgcttct
    16561 aatttgggtg ttattccgac ggatgctcca gtatttgatg ctgtatggtc ttatattgta
    16621 cctcttgcta ttccgttgtt attgtttcaa ttagatcttc atgctctatt taaggaaagt
    16681 ggacgtatgc tgtttatttt cctgattagt tcactaggga cggtcattgg aacgcttgtc
    16741 tcatttgcac tattgaaaaa ctatattcct gaactagata aggtagctgg catgatttca
    16801 gcatcttata cgggaggtgg tgttaatttt gcagctatgt cagctaagct taaccctgct
    16861 aaagatgtta ttgcagcaac aattgttgct gataatttga tgatggcttg ttactttttt
    16921 attttgattg gtatctcttc ctcatattgg gtcagaaaag tttggggaag tccatatcag
    16981 gataaattgg agcaggaata tcatgatccg agtgtgaata aggctgccga gtattggaaa
    17041 cctaaatcca tttcgctaca gagtatagcc ttatctttgg ctgcctcgat tttgttggtc
    17101 gcagtttcat tctcattatc cagttttttg caaaatcatt ttcaaagtgt tgatggtgtt
    17161 gcattaaaaa tgctgacagg tttaattagt gacaaatatt tgctgttaac gacatttaca
    17221 ttggcagttg ttttattttt ccgtaaaggc attcaaaaac tagatggcag tcaagaatta
    17281 gggacatatt gtatttatct gttttttgtt gtgattggtg ttcctgcctc tataccgtta
    17341 attattaaaa cagcaccatt actctttgtt tttactttga ttattgcggt attgaatttg
    17401 ttactgacgt tagtgttagg caagctgttc aaattcagta ttgaagaaat tgtattggct
    17461 tgtaatgcca atattggagg gccgactact gcagcagcct tagccatcag taaaggttgg
    17521 cgtgatttag tcggtgcaat tttgttaatt ggtactgtag gctacattat cggtaactat
    17581 ataggttcgt ttgtatatgc cctattgagc tgaagactaa tctaacaatc catgaacatt
    17641 ttcagacgac ccccttccaa aaacgtcggc tgaaacctca aaccacaaga aaaacagatc
    17701 cccaggagaa ccgacatggc tgccaaccaa cgttaccgca aaccgctgcc cggtacggat
    17761 ttggaatact acgacgcgcg tgcggcgtgt gaggacatca agcccggctc ttacgacaag
    17821 ctgccttata caagccgtat cttggctgag aacttggtca accgcgcgga caaagtcgat
    17881 ttgccgacgc tgcaaagctg gctgggccag ttgatagaag ggaagcagga aatcgacttt
    17941 ccgtggtatc ccgcgcgggt ggtgtgccac gatattctgg ggcagaccgc gctggtggat
    18001 ttggcgggct tgcgcgatgc gattgccgaa aaaggcggcg atcctgccaa agtgaatccg
    18061 gtggtgcaaa cccagcttat cgtcgaccac tctctggcgg tggagtgcgg cggttacgat
    18121 cctgatgcct tccgcaaaaa ccgcgaaatc gaagatcgac gcaacgaaga ccgtttccac
    18181 ttcatcaact ggacaaaaac cgcgtttgaa aatgtggacg tgattccggc gggcaacggc
    18241 atcatgcacc aaatcaatct agaaaaaatg tcgccggttg ttcaagttaa aaacggcgtg
    18301 gctttccccg atacctgcgt cggcacggat tcgcacacgc cgcacgtcga tgcgctgggc
    18361 gtgatttccg tgggcgtggg cggattggaa gcggaaaccg taatgctggg acgcgcgtcc
    18421 atgatgcgcc tgcccgatat tgtcggcgtt gagctgaacg gcaaacggaa ggcgggcatt
    18481 acggcgacgg atattgtgtt ggcactgacc gagtttctgc gcaaagaacg cgtggtcggg
    18541 gcgtttgtcg aattcttcgg cgagggcgcg agaagcctgt ctatcggcga ccgcgcgacc
    18601 atttccaaca tgacgccgga gttcggcgcg actgccgcga tgttcgctat tgatgagcaa
    18661 accattgatt atttgaaact gaccggacgc gacgacgcgc aggtgaaatt ggtggaaacc
    18721 tacgccaaaa ccgcaggctt gtgggcagat gccttgaaaa ccgccgttta tcctcgcgtt
    18781 ttgaaatttg atttgagcag cgtaacgcgc aatatggcag gtccaagtaa cccgcatgcc
    18841 cgttttgcca ccgtcgattt ggcggcgaaa gggctggcga agccttacga agagccttca
    18901 gacggacaaa tgcccgacgg cgcggtcatc atcgccgcga ttaccagttg caccaacact
    18961 tccaacccgc gcaacgtcgt tgccgccgcg ctcttggcgc gcaacgccaa ccgcttcggg
    19021 ctgaaacgca aaccgtgggt caaaacctcg tttgcccccg gttcgaaagt ggcggaaatt
    19081 tatttgaaag aagcaggcct gctgcccgaa atggaaaaac tcggcttcgg tatcgtcgcc
    19141 ttcgcctgca ccacctgcaa cggcatgagt ggcgcgctgg atccgaaaat ccagaaagaa
    19201 atcatcgacc gcgatttgta cgccaccgcc gtattatcag gcaaccgcaa cttcgacggc
    19261 cgtgtccatc cgtatgcgaa acaggctttc ctcgcttcgc ctccgttggt cgttgcctac
    19321 gcgctggcag gcagtatccg tttcgatatt gaaaacgacg tactcggcgt tgcagacggc
    19381 aaggaaatcc gcctgaaaga catttggcct gccgatgaag aaatcgatgc cgtcgttgcc
    19441 gaatatgtga aaccgcagca gttccgcgat gtgtatgtac cgatgttcga caccggcaca
    19501 gcgcaaaaag cacctagtcc gctgtacgat tggcgtccaa tgtccaccta tatccgccgc
    19561 ccaccttact gggaaggcgc attggcaggg gagcgcacat tgagcggtat gcgtccgctg
    19621 gcgattttgc ccgacaacat caccaccgac cacctctcgc catccaatgc gattttggca
    19681 agcagtgccg caggcgaata tttggcgaaa atgggtttgc ctgaagaaga cttcaactct
    19741 tacgcaaccc accgcggcga ccacttgacc gcccaacgcg caacctttgc caatccgaaa
    19801 ctgtttaacg aaatggtgag aaacgaagat ggcagtgtac gccaaggttc gctggcacgc
    19861 gttgaacccg aaggccaaac catgcgcatg tgggaagcca tcgaaaccta tatgaaccgc
    19921 aaacagccgc tcatcatcat tgccggtgcg gactacggtc aaggctcaag ccgcgactgg
    19981 gctgcaaaag gcgtacgcct cgccggtgtg gaagcgattg ttgccgaagg cttcgagcgt
    20041 atccaccgta ccaacttgat cggtatgggc gtattgccgc tgcagttcaa accgggtacc
    20101 aaccgccaca ccttgcaact ggacggtacg gaaacctacg acgtggtcgg tgaacgcaaa
    20161 ccgcgctgcg atctgaccct cgtgattcac cgtaaaaacg gcgaaaccgt cgaagttccc
    20221 gttacctgcc gcctcgatac tgcagaagaa gtattggtat atgaagccgg cggcgtgttg
    20281 caacggtttg cacaggattt tttggaaggg aacgcggctt agaggtcgtc tgaaaagcaa
    20341 gacgtagcgt gggtcgggtt caacattttg ctcattcacg taattctcga tatggcaggc
    20401 atctactgta aatcgtcatt cccgcgcagg cgggaatcca gaaagtggaa ttgaggaaac
    20461 cttatttatc cgatgagttt ctgtgcggac aaatttggat tcccgcctgc gcgggaatga
    20521 cggggtttaa taatctgccg tatcacaaca cagtagccgt agattgtggc gaaccccgac
    20581 agtttgcgga atcaaacggc tttggtcgga gtggcagcct aatccactat aaaaatcgtg
    20641 ggcagagccc acgctacata aggagaatct agaaatgccg caaattaaaa ttcccgccgt
    20701 ttactaccgt ggcggtacat caaaaggcgt gtttttcaaa cgttccgacc tgcccgaggc
    20761 ggcgcgggaa gcgggcagcg cacgcgacaa aatcctcttg cgcgtactcg gcagcccgga
    20821 tccctacggc aagcagatag acggtttggg caacgccagc tcgtccacca gcaaggcggt
    20881 gattttggac aagtccgaac gcgccgatca cgatgtcgat taccttttcg ggcaagtttc
    20941 catcgacaaa ccttttgtcg attggagtgg caactgcggc aacctcaccg ccgccgtggg
    21001 cgcatttgcc atcgagcaag gcttggtcga taaaggcaag attccttcag acggcatctg
    21061 cacggtcaaa atctggcaga aaaacatcgg caaaaccatt attgcccatg taccgatgca
    21121 aaacggcgca gttttggaaa caggcgattt tgagctcgac ggcgtaacgt tcccggcagc
    21181 cgaagtacaa atcgaatttc ttgatccagc cgacggtgaa ggcagtatgt tcccaaccgg
    21241 caatttggtc gatgaaattg atgtgccgaa tataggccgt ttgaaagcca cgctcatcaa
    21301 cgcgggcatt ccgaccgttt tcctgaatgc cgccgacttg ggctacacgg gcaaagagtt
    21361 gcaagacgac atcaacaacg atgccgcggc tttggaaaaa ttcgagaaaa tccgcgctta
    21421 cggtgcgctg aaaatgggtc tgatcagcga cgtatccgaa gctgccgctc gcgcgcacac
    21481 gccgaaagtc gccttcgtcg cgcccgccgc cgattacacc gcctccagtg gcaaaaccgt
    21541 gaatgccgcc gacatcgatt tgctggtacg cgccctgagc atgggcaaat tgcaccacgc
    21601 gatgatgggt accgcctctg ttgccattgc gaccgccgcc gccgtgcccg gtacgctggt
    21661 caaccttgcc gcaggcggcg gaacgcgtaa agaagtgcgc ttcgggcatc cttccggcac
    21721 attgcgcgtc ggtgcagccg ccgaatgtca ggacggacaa tggacggcca ccaaagcggt
    21781 tatgagccgc agcgcacgcg tgatgatgga aggttgggtc aggatgccgg aagattgttt
    21841 ttaaattgac gtagcatggg tttgcccgcg agccataaac aggtcgtctg aaaaacaagt
    21901 aaacatcaaa tcactgacca ttcctttccc ttgccctgtg gcggaaggcg gcaaatcaca
    21961 aggaagaaca cggaaacccc gataaaagac agcttcccgt attaccgtca ttcccgcgca
    22021 ggcgggaatc tagacctgtc aatatggagg attggtaggg gaaaacaggt ttcgtgagtt
    22081 ctacattctg gattcccgcc acagcctgtc ctcgcgtagg cggggacgga ataacgatag
    22141 aaaatgcggc atacgctttg cccaaagagg ccgtctgaaa caccttgcgc ctgatgtctg
    22201 cctttttcag acgaccccac accaaaaaaa caaccacaaa ctacaaggag aaacatcatg
    22261 tccgaccaac tcatcctcgt tctgaactgc ggcagttcat cgctcaaagg cgccgttatc
    22321 gaccgaaaaa gcggcagcgt cgtcctaagc tgcctcggcg aacgcctgac cacgcccgaa
    22381 gccgtcatta cgttcaacaa agacggcaac aaacgccaag ttcccctgag cggccgaaat
    22441 tgccacgccg gcgcggtggg tatgcttttg aacgaactgg aaaaacacgg tctgcacgac
    22501 cgcatcaaag ccatcggcca ccgcatcgcc cacggcggcg aaaaatacag cgagtctgtt
    22561 ttgatcgacc aggccgtaat ggacgaactc aatgcctgca ttccgcttgc gccgctgcac
    22621 aaccccgcca acatcagcgg catccttgcc gcacaggaac atttccccgg tctgcccaat
    22681 gtcggcgtga tggatacttc gttccaccaa accatgccgg agcgtgccta cacttatgcc
    22741 gtgccgcgcg agttgcgtaa aaaatacgct ttccgccgct acggtttcca cggcaccagt
    22801 atgcgttacg ttgcccctga agccgcacgc atcttgggca aacctttgga agacatccgc
    22861 atgattattg cccacttagg caacggcgca tccattaccg ccatcaaaaa cggcaaatcc
    22921 gtcgatacca gtatgggttt cacgccgatc gaaggtttgg taatgggtac acgttgcggc
    22981 gacatcgatc cgggcgtata cagctatctg acttcccacg ccgggatgga tgttgcccaa
    23041 gtggatgaaa tgctgaacaa aaaatcaggt ttgctcggta tttccgaact ttccaacgac
    23101 tgccgcaccc tcgaaatcgc cgccgacgaa ggccacgaag gcgcgcgcct cgccctcgaa
    23161 gtcatgacct accgcctcgc caaatacatc gcttcgatgg ctgtgggctg cggcggcgtt
    23221 gacgcactcg tgttcaccgg cggtatcggc gaaaactcgc gtaatatccg tgccaaaacc
    23281 gtttcctatc ttgatttctt gggtctgcac atcgacacca aagccaatat ggaaaaacgc
    23341 tacggcaatt cgggcattat cagcccgacc gattcttctc cggctgtttt ggttgtcccg
    23401 accaatgaag aactgatgat tgcctgcgac actgccgaac ttgccggcat cttgtagcca
    23461 aaaaagggac gagtccgcaa aaatgccgtc tgaaattttc agacggcatt ttgtttggcg
    23521 tttgggcgta caatacggaa aacatgacga taaggaaaca aaccatggca cagtttttcg
    23581 ccgttcatcc cgacaacccc caagaacgcc tcatcaagca ggcggtcgaa atcgtcaata
    23641 aaggcggcgt ggtcgtttat ccgaccgatt cctgttatgc cttgggctgc aaactcggcg
    23701 ataaggcggc gatggaacgc atactctcca tccgcaaaat cgatttgaaa caccacctga
    23761 ccctgatgtg cgcagatttg agcgagttgg gcacatacgc caaagtcgac aacgtacagt
    23821 ttcgtcagct taaagccgcc acacccgggc cttatacttt tattttacag gcgacgaagg
    23881 atgtgccggc gcgcacgctg cacccgaaac gcaaaaccat cgggctgcgt attcccgata
    23941 atgccattgc acaagccctg ctgggggaat tgggcgagcc gcttttaagc tgcaccctga
    24001 tgctgcccga agacggcgaa ccattgaccg atccttatga aatccgcgag cgtttggaac
    24061 acgccgtcga tttggtgatt gacggcggct ggtgcggaac cgagccgacc accgtcgtcg
    24121 atatgaccga cggcacggaa ttggtgcgcc aaggttgcgg cgatacggcg gtgttcggtt
    24181 tgtagggaaa ccgatgccgt ctgaagcatc ggctgttcag acggcattgc gcgccttgcc
    24241 ggcggcagtc cgaaatgccg gcgcgtatcg cgctcggtcg gaatatccgt ttgaaacggc
    24301 attttgatgc attactgcac cgcaatcgga attctcggtt cgtagagcag gtcgtaggtc
    24361 ggcttgttga gcaggtcttg gagcgtgaaa ccgtccagat acgtgaaaaa cgacttcatc
    24421 gcgccgccga gtatgcccgt cagccggcag gacggtgtaa tcaggcattc gttgttctcg
    24481 cccatgcact cgaccagctg catcggttcg aggtggcgga caaccgagcc gatgttgatg
    24541 cggtcgggcg gtgcggcaag ccgcagaccg ccgccttttc cgcgcacact gtggaggaag
    24601 ccgcctttga ccagcgcggt aacgaccttc atcagatggc ttttggaaat gccgtaggtt
    24661 acggcgatgg tactgatgtt gaccagcgca tcgtcgttga tggcagtgta gataaggacg
    24721 cgcagcccgt agtccgtatg ttgtgtcaaa tacatgattt tctcggtatg gattgttatt
    24781 cttatcggta cggtttaagg ttcacggaca ataccttaat ggttgaaacc ctgtccgtcg
    24841 gggcggtaga atgcagcctg tctgcggcgg tatgccgtct gaaacatccg cgctaccgtt
    24901 tgataatttg ttattgtaac tcaaaatcat gaaaccgttg aaacgacatc ccgcccttat
    24961 cgggctttcg cgtgaccacc accattcgct ttccctgtgc gtgcgtctgt tgcggacgcc
    25021 ggaagaaagg catcgggacg aactcgaacc gcatttttcc gaattggaaa cccattttcg
    25081 cgaagaagaa gccaagtttg ccccaatttg gcagaatgtc gcccccgaat tgaaacaacg
    25141 tttcgagaaa gaccacgccc gactgcggca gatgatggca agccccgaat acggtaacgc
    25201 ggcgtggaat accgcttttg ccacaaccct gcgcgaccac gcgcgctttg aagaacgcga
    25261 gctgtttccc gccgccgaac cgtttttgcc ggcatgattc cgttttgcgg caaatatatt
    25321 aatgataaac aaggaacaca catgaaattt accaagcacc ccgtctgggc aatggcgttc
    25381 cgcccatttt attcgctggc ggctctgtac ggcgcattgt ccgtattgct gtggggtttc
    25441 ggctacacgg gaacgcacga gctgtccggt ttctattggc acgcgcatga gatgatttgg
    25501 ggttatgccg gactggtcgt catcgccttc ctgctgaccg ccgtcgccac ttggacgggg
    25561 cagccgccca cgcggggcgg cgttctggtc ggcttgacta tcttttggct ggctgcgcgg
    25621 attgccgcct ttatcccggg ttggggtgcg tcggcaagcg gcatactcgg tacgctgttt
    25681 ttctggtacg gcgcggtgtg catggctttg cccgttatcc gttcgcagaa tcaacgcaat
    25741 tatgttgccg tgttcgcgct gttcgtcttg ggcggtacgc acgcggcgtt ccacgtccag
    25801 ctgcacaacg gcaacctagg cggactcttg agcggattgc agtcgggctt ggtgatggtg
    25861 tcgggtttta tcggtctgat tggtacgcgg attatttcgt tttttacgtc caaacggttg
    25921 aatgtgccgc agattcccag tccgaaatgg gtggcgcagg cttcgctgtg gctgcccatg
    25981 ctgaccgcca tgctgatggc gcacggcgtg atgccttggc tgtcggcggc tttcgcgttt
    26041 gcggcaggtg tgatttttac cgtgcaggtg taccgctggt ggtataagcc tgtgttgaaa
    26101 gagccgatgc tgtggattct gtttgccggc tatctgttta ccggattggg gctgattgcg
    26161 gtcggcgcgt cttatttcaa acccgctttc ctcaatctgg gtgtgcatct gatcggggtc
    26221 ggcggtatcg gcgtgctgac tttgggcatg atggcgcgta ccgcgctcgg tcatacgggc
    26281 aatccgattt atccgccgcc caaatccgtt ccgtttgcgt tttggctgat gatggcggca
    26341 accgccgtcc gtatggttgc cgtattttct tccggcactg cctacacgca cagcatacgc
    26401 acctcttcgg ttttgtttgc actcgcgctt ttggtgtatg cgtggaagta tattccttgg
    26461 ctgattcgtc cgcgttcgga cggcaggccc ggttgagaca aaccgccgca gatttcgggt
    26521 ctgggcggtt tgcttttcag acggcagggc ggtcagttgc cgtccagcca gcggtcgcgt
    26581 gtggttttgg cttcttcaaa atagcggtac agggcttcgc ggtcgtcggc ggtcaggatg
    26641 tctgccaaaa cgtccaactg tttgcccaag ccttgaacca gttgcagcag gctgtctttg
    26701 ttggcaatgc agatgtccgc ccacacggcg ggatgaccgg aggcgatacg ggtgaagtcc
    26761 cgaaagcccg tggcggcgaa tttcagatat tcctgtccgt cggggtggtc gagaatctgg
    26821 tggacatagg cgaaggcggt caggtggggc atatgggaga cggcagcgaa aaccgcgtcg
    26881 tggcgttgcg cgtccatcgt ataaatttcc gcaccgaccg cgtgccacag ttcttctacc
    26941 aaggcaatgc cgtctgaatg ttcgccgccg tgtggcgtga tgatgagttt tctgtggcgg
    27001 aacagcccga actgcgcggc ttgcgcaccg cttctgtccg aaccggcaat cgggtgggcg
    27061 gcgatgcagc ggtgcaggcg gtcgggcaga cagcggcgga aggcttcgat gaccgaagat
    27121 ttggtgctgc cgacatcgga aatccaagtg tgttccggca aaacggggcg cagcgcggtc
    27181 aaaatggcgg gaaaggtggc gacgggcgtg gcaatcagta ccaagtccgc accgccgatg
    27241 ctgtccgcgt cgatggcaac ggacgcacgg tcaatcacgc cgcgttccaa tgcacgttcg
    27301 aggttgtcgc ggtcggtgtc gataccggta acggtgcgga cgagtccctg ccttttgagg
    27361 tcgagaacga acgaaccgcc gatcagccct acaccgatga gggcaatatg gttcaaaatg
    27421 ggcatttgtg taaacggttt tcgcaaagta ccgtcatggt agcctatcgg cggaatatgc
    27481 cgcaaggtcg gcaggaaaaa ggagaagaaa tggacaaaat cagagttgcc gccgtgcaga
    27541 tggtgtcggg cgtgtcgccg gaaaccaacg tcgccgccat gaaacgcctg gtcgcacggg
    27601 cggcggagca gggtgtggat tgggtgctgc tgcccgaata ttgggtgctg atgggcgcaa
    27661 acgataccga caaactcgcg cttgccgagc ctttgggcgg cggacgcttt cagacggcat
    27721 tgagcgaaac ggcgaaagaa tgcggcgtgg tgctgttcgg cggaaccgtg ccgctgcaaa
    27781 gccccgaggc gggcaaggtc atgaatactt tattggtgta cgggcgcgac ggcaaacgga
    27841 cggggctgta ccacaaaatg cacctcttcg gcttttccgg tttgggcgaa cgctatgccg
    27901 aagccgatac catccgcgcg ggcggggatg tgccgcactt gtcggcagaa ggcgtgtcgg
    27961 tggcggcggg catttgttac gatgtccgct ttcccgaatt tttccgccgc cagctgccgt
    28021 ttgacgtatt gatgctgccc gctgcgttta cgcacacgac gggcaaggcg cattgggagc
    28081 tgctgctgcg cgcgcgtgcc gtcgaaaacc aatgttacgt cgtggcggcg gcacagggcg
    28141 gtttgcacga aaacggacgg cgcacgttcg gacacagcat gattgtcgat ccgtggggcg
    28201 acgtgttgga cgtattgccc gaaggcgaag gcgttgttac ggcagacatc gatgccaacc
    28261 gcctgaacag cgtccgcaac cgcctgcccg ccttgaaata ccgggttttg gatgccgtct
    28321 gaaggttcag acggcatcgg tgccggggaa tcagcgggct gtaggatggg cttcagcctg
    28381 ccatttccat caatcccaca tttctaccgt tttcatcgaa tccatcgaat ccgccccttt
    28441 cgacgaccca gtccta
//
LOCUS       DAXHKG010000007        27630 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.007, whole genome shotgun sequence.
ACCESSION   DAXHKG010000007 DAXHKG010000000
VERSION     DAXHKG010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27630
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.007"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..285)
                     /locus_tag="ACFMWP_000249"
     CDS             complement(<1..285)
                     /locus_tag="ACFMWP_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890915.1"
                     /translation="MRHKTGVAMAFEQMGQFVDDDVLSGADTRTAPLGGNTLMCRFLI
                     AFLRISTFRLPIFILSSVFRVPDNQLKHCINIQPFFINEQLKLDFKAFLLH"
     gene            247..354
                     /locus_tag="ACFMWP_000250"
     CDS             247..354
                     /locus_tag="ACFMWP_000250"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HFC5890916.1"
                     /translation="MLERHRNARFMAHMDNFLPNWQSIKQQLNALELGV"
     gene            complement(423..752)
                     /locus_tag="ACFMWP_000251"
     CDS             complement(423..752)
                     /locus_tag="ACFMWP_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890917.1"
                     /translation="MLSQSQWLDAVKGRLRVRSDYALSKRWAVTPSEVSQYRRNRLRF
                     PFAVVLDIADVMDIDPIEIIAGLEYRRCREKDMERVKGAYFKAHCAHFVYPNNPGFFR
                     RKKRFFG"
     gene            complement(834..1151)
                     /locus_tag="ACFMWP_000252"
     CDS             complement(834..1151)
                     /locus_tag="ACFMWP_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890918.1"
                     /translation="MKKALKWIAVFIAFSVWSFGIFLYGFNNGTEAGMQCAQIKGNGL
                     CAMSFDGSASKIEFSDLNEKNDKQTLCFQSLWEFNDECEKKESNSIYYIDLPENNPKD
                     IKQ"
     gene            complement(1153..1341)
                     /locus_tag="ACFMWP_000253"
     CDS             complement(1153..1341)
                     /locus_tag="ACFMWP_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890919.1"
                     /translation="MKALRIKEEQEESIRRLAINANKKLIQLGREPLRDSELAHILLN
                     EAIRCAKIDDDGKITIGN"
     gene            1798..2970
                     /locus_tag="ACFMWP_000254"
     CDS             1798..2970
                     /locus_tag="ACFMWP_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC5890920.1"
                     /translation="MEFSRDTNSCIQPQEYERYEKVVMDAKGNLKVVPLRRGKGDSAF
                     IDTISFTFHESSVAKFFLITREFFPIKGVSDRDVLVRFSDILEWIFGFGISSHQPVGK
                     GRFYESRWQMERDGVLYGQVYIGGQQETILVEMTGKGCAVAEEGWEERLYRFLTADTT
                     YNAKITRCDVAKDFYENEISPDTAWEMYEQGKFDKRGKRPLVGKLGDDWLNPTEKGKT
                     LTIGSKHSSVFCRIYDKAKEQGDTSGVFWCRFEQQYMGRNCYLSLDILLSPGSFWGGA
                     FEICASLQQKGVTEHRCVSAKKRLELSIERSKQVASQQVGRAINMMVFMGMSDYEIVD
                     YLRRKDGAMPHRLNPASFMIKEKRACEYIHDYEKEIEIIKFDEYGMVLDSLGDLND"
     gene            2963..3247
                     /locus_tag="ACFMWP_000255"
     CDS             2963..3247
                     /locus_tag="ACFMWP_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890921.1"
                     /translation="MIRVREKQYPCLVLDDYFQSGLITRRMYFSLDKFHHIPVSGAVI
                     YKDDPIYFRRLEKVLKANAKELDCYAYRVLADGRLFLVDRLITDFFDERK"
     gene            3251..3553
                     /locus_tag="ACFMWP_000256"
     CDS             3251..3553
                     /locus_tag="ACFMWP_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890922.1"
                     /translation="MKMIARVTGMKRSKGITEKGQSYDSTKLFIEIQFPESQDMCGYA
                     SQEFAYGTYENYEKLLASGVKMPFKAEIDFDFVTNGKAVKQIVTNVVPVFEKPKNS"
     gene            3725..3952
                     /locus_tag="ACFMWP_000257"
     CDS             3725..3952
                     /locus_tag="ACFMWP_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HFC5890923.1"
                     /translation="MFKSIKTNVRKAGAVLALATLSAPTWADGIEGVANGIVTEINKV
                     VPVVSSVGVALLSVYVLVKAFRLVSGFVAGR"
     gene            3962..4264
                     /locus_tag="ACFMWP_000258"
     CDS             3962..4264
                     /locus_tag="ACFMWP_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890924.1"
                     /translation="MMGYRVGMQCFSKKEQAEDYSVSKIVPVISPDGKLYAPYKSGGN
                     WYFEGYRIDLSFPQCSQESQFAQGAMLASSFLILFVIVWAFKTVGNMIKGSFANDG"
     gene            4333..4617
                     /locus_tag="ACFMWP_000259"
     CDS             4333..4617
                     /locus_tag="ACFMWP_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890925.1"
                     /translation="MKFKRMAVAFVMSAFFVPAFSEDIEIHRVEEGFKKLNMTGKLYE
                     SVSNAPFGTVFPMRSRDGEIQYTMHKLGCFFNTCYFNVNKVPDNLKKKKT"
     gene            4614..5603
                     /locus_tag="ACFMWP_000260"
     CDS             4614..5603
                     /locus_tag="ACFMWP_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor TspB C-terminal domain-related
                     protein"
                     /protein_id="HFC5890926.1"
                     /translation="MTVFDISDLNLKDPDQQDADDLGMTLADYKKMIQEDNDYGRIWQ
                     KIQLKKAEQLQKEKEEAVKRKRKRKIFSDYRGHRFKSVKELCYDVYKGLTYGRGWNGS
                     YQHIEVKGVDSGLYENNAELGRCNAVWPDGKVAHTLDYSVLYEDIPEGEKPEEEKKEP
                     EKDHPKPVEKPDSSNPKPSENPNVGTLGGGASPAVGNAPGGGSLGASDGGGSTGAGNG
                     GNNGSTAQGSGKGKGDGEDSEKMPDVPKYGEPDWGSLKSDGRFGSYATATAFSTGGHC
                     INDIRLDMGQFGSHTLQMGFLCDVLKKLRYVFIAMAYLYSAILVFKTVNSLKG"
     gene            5606..5896
                     /locus_tag="ACFMWP_000261"
     CDS             5606..5896
                     /locus_tag="ACFMWP_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC5890927.1"
                     /translation="MPRLIVALFMALVPMLKDLFFKILAGLGASFVSYEALSLSTDAI
                     LKYFQNAYGNIPPDILNMFALAGIPEALNIIFGGFSFSFGIWSSYRVLKFLK"
     gene            5967..7010
                     /locus_tag="ACFMWP_000262"
     CDS             5967..7010
                     /locus_tag="ACFMWP_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HFC5890928.1"
                     /translation="MAKKINNEWKDRKIFIEGIPELTIETTPIPEGHSINDMHVWLQY
                     PENNGSVVIIDEAQNVFPPRSPAVKAPPLVEWLHVHRHSGIDIILITQMPQRIDKHVR
                     DLVGAHYHIHKTPLGIFMRYFWDYCANNPRSEFANARPEVYKLDKKAFGLYKSAEIHT
                     KVKTPKSRVLYIIPIALVLFALFFYLGYKLLLGLGNKDGTEEGEAKTQTIVSEEQLEQ
                     VRGMAYKASGEAGRNIGNQLGSDKENQNLTKEMLEPTIDGHPESKPIYNGVRQVRQME
                     FPVACVKSSNSCNCYSGQATILKEIDKKTCIDYVDNGMPFNPYKEEQREIKIDTDEQK
                     PLKKQVLVMDAAK"
     gene            complement(7491..7907)
                     /locus_tag="ACFMWP_000263"
     CDS             complement(7491..7907)
                     /locus_tag="ACFMWP_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890929.1"
                     /translation="MTEEMMKKQRHILCVGCLYIILKVNVFPNTGWMEASKGMQGMSF
                     STFGYADAPGYTFSRIGHTLIFLLGKTTGTRTTVSDSSHNDKLRLFLRILQVLAKVSV
                     ATRMSYFFRRISVRYHSVSGFPVLKNSSEKRKRGYS"
     gene            complement(7940..8455)
                     /locus_tag="ACFMWP_000264"
     CDS             complement(7940..8455)
                     /locus_tag="ACFMWP_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890930.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILETELSNERKALVEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(8521..8958)
                     /locus_tag="ACFMWP_000265"
     CDS             complement(8521..8958)
                     /locus_tag="ACFMWP_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC5890931.1"
                     /translation="MKLKSRNSLPSDKEARAGCLSLPANNGIIRALSPPFTGINIRLF
                     AALGLLSLSGAAAQASVYHCNSNGKSVYTSAPAGSCADADLPKISSHQGGGYRLKIKK
                     LSQEAKIHIESKKKNKKPAGKKNRQAAKAPKENQKQPTEKKSP"
     gene            complement(8921..10843)
                     /locus_tag="ACFMWP_000266"
     CDS             complement(8921..10843)
                     /locus_tag="ACFMWP_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC5890932.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGKITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPKVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(10920..11291)
                     /locus_tag="ACFMWP_000267"
     CDS             complement(10920..11291)
                     /locus_tag="ACFMWP_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HFC5890933.1"
                     /translation="MLFEENPIDEHFAEYDRRTGEIRLSGRHFNKPVLLHRDSAGLSK
                     WQSLSELTPDNLLSDVKADDYPEILIIGTGAAQEFIHPKIMADFSRIGIGVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            11489..12796
                     /locus_tag="ACFMWP_000268"
     CDS             11489..12796
                     /locus_tag="ACFMWP_000268"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HFC5890934.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            12789..13223
                     /locus_tag="ACFMWP_000269"
     CDS             12789..13223
                     /locus_tag="ACFMWP_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890935.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(13282..13551)
                     /locus_tag="ACFMWP_000270"
     CDS             complement(13282..13551)
                     /locus_tag="ACFMWP_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HFC5890936.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(13733..16183)
                     /gene="lon"
                     /locus_tag="ACFMWP_000271"
     CDS             complement(13733..16183)
                     /gene="lon"
                     /locus_tag="ACFMWP_000271"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HFC5890937.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHIHVP
                     EGATPKDGPSAGIAMTLAAVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEPSGAE
                     AAAESASKPKPRSRATKH"
     gene            16434..17537
                     /locus_tag="ACFMWP_000272"
     CDS             16434..17537
                     /locus_tag="ACFMWP_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC5890938.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLGLRPADFLEKAFIRAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            complement(17565..19310)
                     /gene="recD"
                     /locus_tag="ACFMWP_000273"
     CDS             complement(17565..19310)
                     /gene="recD"
                     /locus_tag="ACFMWP_000273"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HFC5890939.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQPFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFDPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGEAHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNKAYCSHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(19378..20073)
                     /gene="lolD"
                     /locus_tag="ACFMWP_000274"
     CDS             complement(19378..20073)
                     /gene="lolD"
                     /locus_tag="ACFMWP_000274"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HFC5890940.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(20066..21313)
                     /locus_tag="ACFMWP_000275"
     CDS             complement(20066..21313)
                     /locus_tag="ACFMWP_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HFC5890941.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            21518..21796
                     /locus_tag="ACFMWP_000276"
     CDS             21518..21796
                     /locus_tag="ACFMWP_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890942.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(21852..22469)
                     /gene="recR"
                     /locus_tag="ACFMWP_000277"
     CDS             complement(21852..22469)
                     /gene="recR"
                     /locus_tag="ACFMWP_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HFC5890943.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(22536..24074)
                     /locus_tag="ACFMWP_000278"
     CDS             complement(22536..24074)
                     /locus_tag="ACFMWP_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HFC5890944.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAMQNEQADGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(24129..24503)
                     /locus_tag="ACFMWP_000279"
     CDS             complement(24129..24503)
                     /locus_tag="ACFMWP_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HFC5890945.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAGTQQKVLSSTAEAVKLMSEMPSLIKRPVLECGGRV
                     YVGFSEETYDGIFNRQALCRQG"
     gene            24653..26281
                     /locus_tag="ACFMWP_000280"
     CDS             24653..26281
                     /locus_tag="ACFMWP_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HFC5890946.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQDGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            26353..27606
                     /locus_tag="ACFMWP_000281"
     CDS             26353..27606
                     /locus_tag="ACFMWP_000281"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HFC5890947.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYTLARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWFALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKTFRAAQDKTEKH"
BASE COUNT         6687 a         6848 c         7057 g         7038 t
ORIGIN      
        1 atgaagcaaa aacgccttaa agtccaactt aagctgctca ttgatgaaaa agggctggat
       61 attgatgcag tgtttgagct gattatcagg cacgcggaat acggagctta atatgaaaat
      121 cggcaatcta aatgtagaaa tccgcaggaa agcgattaaa aacctgcaca tcagcgtgtt
      181 gccgccaagt ggcgcggttc gggtgtccgc accgcttaat acgtcgtcgt ccacgaactg
      241 acccatttgc tcgaacgcca tcgcaacgcc cgttttatgg cgcatatgga caactttctc
      301 ccaaactggc aaagcatcaa acaacagctt aatgccttgg agttaggggt gtaacgcaag
      361 gacgaatccg aagcagaccg tttgcacaaa tatataattt aacataatat acattatgcg
      421 aactagccga aaaaccgttt tttacggcgg aaaaagcccg gattgttcgg atagacaaaa
      481 tgcgcgcaat gggctttgaa atacgcccct ttgacgcgct ccatgtcctt ttccctgcac
      541 cgcctatatt ccaaacctgc aataatttca atcggatcta tatccatcac gtcggcaata
      601 tccaagacga cggcaaaagg aaaccgcaac cggttgcgcc gatattggga cacctcggac
      661 ggcgtaaccg cccatctttt ggaaagcgcg taatcggaac gcacccgtaa ccgccctttg
      721 acggcatcca gccattggga ttgtgaaagc ataataaaat caaagccttt gcgaaaacct
      781 gtaatttaat gatacagatt tttgcaaagg ctctctattt gagcatatgc tccttattgt
      841 tttatgtctt tgggattgtt ttcgggtagg tctatataat atatagaatt agattctttt
      901 ttttcgcatt catcgttaaa ttcccataat gattgaaagc aaagggtttg tttatcattt
      961 ttctcattaa ggtctgaaaa ttcgattttt gaagccgaac catcaaagga cattgcacaa
     1021 agtccattac ctttgatttg ggcgcattgc attcctgctt cagtcccgtt attgaatccg
     1081 tacagaaata tgccgaatga ccaaacggaa aaagcgataa agacggcaat ccatttcagg
     1141 gcttttttca tatcagttac ctatagtgat ttttccgtcg tcgtcgattt tggcgcatcg
     1201 gattgcctcg tttaaaagta tgtgtgcaag ctcgctgtcc ctaagcggtt cgcggccaag
     1261 ctgaatgagc ttcttgttgg cattgatggc aagccttctg atgctctctt cttgctcttc
     1321 tttgattcgt agtgccttca ttttttcaat ttcctttcat atttcaaatt taaaacatta
     1381 caagcagtgt taacaagtaa tttgtgattg acttaacaag ttaactggtt aataattact
     1441 caaaatgtta acgcattaac tcattaactc gaatctgttg taaaagtgca aatgggtcta
     1501 aaaatgaaca aacgacgagc agaaataata tttgtaaacg gcaaatggct ggttaattgt
     1561 tattcatacg gaatttttgt aacagaagcc gaatttgata cgcttttttt ggctttgggt
     1621 tctgcccgcc aatatatcga atcgggcgaa attgtttctt tgtccgtttg cgatgttttt
     1681 ttagctttgg gcagtcgaga atcacgccgc tcgttcggct tgtgtaactg atgtttttat
     1741 gccccccctt atctaacagg gggggtcgaa aatcgaaggg cgacgggaat ctaaaacatg
     1801 gaattttcaa gagacacaaa ttcatgcatt caacctcaag agtacgagcg ttatgaaaag
     1861 gttgttatgg atgcaaaggg aaatttaaag gttgttccct taaggcgtgg caaaggcgat
     1921 tccgcattta tagacacaat cagctttacg tttcatgaaa gttctgttgc aaagtttttt
     1981 ttaataacaa gggaattttt tccgattaaa ggcgtatcag atagggatgt attagttcgt
     2041 ttttcagaca ttcttgaatg gatattcggt ttcggaattt cgtcgcatca acctgtcggc
     2101 aaaggtcggt tttatgagtc gcgctggcag atggaaagag acggagtttt gtacggtcag
     2161 gtttacatcg gtggacaaca ggaaaccata cttgtagaga tgacgggtaa aggttgtgca
     2221 gttgcggagg aaggctggga agaacgtttg tataggtttt taacggcgga tacgacttat
     2281 aacgcaaaaa taacccgttg cgacgttgca aaagactttt acgaaaatga aatctcgcct
     2341 gataccgctt gggaaatgta cgaacagggc aagtttgata aacgcgggaa acgtccgctt
     2401 gtcggcaagc tcggggatga ctggcttaac cctactgaaa aaggcaaaac ccttaccatc
     2461 ggttctaaac attcttcggt tttttgccgt atctatgaca aagcaaaaga acagggagat
     2521 acaagcggcg ttttttggtg ccgttttgaa cagcagtata tgggcagaaa ctgttatttg
     2581 agtttagata ttttgttatc gccggggtct ttttggggcg gcgcgtttga gatttgcgct
     2641 tcattgcaac aaaaaggcgt gacggagcat aggtgtgtaa gtgccaaaaa aagattggaa
     2701 ttgagcattg aacgctctaa gcaggttgca tcgcaacagg tcgggcgcgc cataaatatg
     2761 atggttttta tgggtatgtc tgattacgaa atcgttgatt atctgcgccg gaaagatggt
     2821 gcaatgcccc atcgtttaaa tcccgcatca ttcatgatta aagaaaaacg cgcttgcgaa
     2881 tatatccatg attatgaaaa agaaattgaa attattaaat ttgatgagta cggaatggtt
     2941 ttagacagtt tgggagattt aaatgattag ggtaagagaa aagcaatatc cttgtttggt
     3001 tttagatgat tattttcaaa gcggcttaat tactcggcgt atgtatttct ctttggacaa
     3061 attccatcat ataccagtat ctggagcggt tatttataag gatgacccta tatatttcag
     3121 acgcttggaa aaagttttaa aagctaatgc taaagaactt gattgttatg cgtatagggt
     3181 tttagcagat ggaaggttgt ttttagtaga taggttaata accgattttt ttgacgaaag
     3241 gaaatagcaa atgaagatga ttgcacgtgt aaccggtatg aaacgaagca aaggcattac
     3301 ggaaaagggt caatcttatg attctacgaa gctctttatt gagattcagt ttcctgaaag
     3361 ccaagatatg tgcggatatg ctagccaaga gttcgcatac ggcacatatg aaaactatga
     3421 aaaactgctt gcttcaggcg taaaaatgcc gttcaaggca gaaattgatt ttgatttcgt
     3481 caccaacggc aaagcagtaa aacagattgt aactaacgtt gtccctgttt ttgagaaacc
     3541 taaaaactca tgaaatatca cgtaagtgcg tggcttccgg ctgcttcaac aggcggatcg
     3601 ccgataattc agtaatttca ttttgacgat gaatcggaag attatgaaga actctactcc
     3661 gatgttccat tttaaggctg tgcggtttgc ctccgaaaac cgtaattttt aaaaaggaaa
     3721 ttttatgttt aaaagcatca aaacaaatgt tcgtaaagcg ggtgcggttt tagcactggc
     3781 taccctttcc gctccgactt gggcggacgg catcgaaggc gttgcaaacg gcatcgtaac
     3841 cgaaatcaat aaagttgttc cggtcgtttc aagcgtcggc gtcgccctgc tctccgttta
     3901 tgtgctggtt aaagcattcc gcctcgtctc cggctttgtt gctggtcgtt aaaaaggtgt
     3961 gatgatggga tacagggtag gaatgcagtg tttttccaaa aaagaacagg cagaggatta
     4021 ttctgtatcc aaaatcgtgc ccgttatatc tcccgatggg aaactgtacg cgccatataa
     4081 atcaggcgga aattggtatt ttgaaggcta tcggatagat ttgtctttcc cgcaatgctc
     4141 ccaagaatca cagtttgcac aaggggcaat gcttgcctct tcgttcctga ttttattcgt
     4201 gatcgtatgg gcatttaaaa cggtaggaaa catgattaaa ggaagttttg caaatgatgg
     4261 ttgatttcta ttttcttatt ggattttttg cagtgatttc attggtttat tttttcaaat
     4321 agggggtatt agatgaaatt taaaagaatg gcggtcgctt ttgtgatgtc cgcttttttt
     4381 gttcctgctt tttcggaaga tattgagatt catcgtgttg aagaaggttt taaaaagtta
     4441 aatatgactg ggaaattgta tgaatctgtt tcaaatgctc cttttggcac tgttttcccg
     4501 atgagaagta gggacggcga aatacaatac acaatgcata agttaggatg tttttttaat
     4561 acatgttatt ttaatgtgaa taaagtacct gataatttaa aaaaaaagaa gacatgacgg
     4621 tttttgacat atcagattta aatttaaaag accctgacca acaggatgcc gatgatttgg
     4681 gtatgacgct ggcggattat aagaagatga ttcaggagga taacgattac ggcaggattt
     4741 ggcagaaaat ccaattaaaa aaggcagaac aattacaaaa agaaaaagag gaagcggtaa
     4801 agaggaagcg gaaaaggaag attttttcag attatagggg gcatagattc aagtctgtca
     4861 aagaactctg ttatgacgtt tacaagggtt tgacttatgg acgtgggtgg aacggcagtt
     4921 accagcatat cgaagtaaaa ggcgttgatt ccggtttgta tgagaataat gcggaattgg
     4981 ggagatgtaa cgctgtttgg ccagatggca aagttgccca tactttagat tattccgtct
     5041 tgtatgaaga tatacccgaa ggggaaaagc ccgaagaaga aaaaaaagaa cccgaaaaag
     5101 accatccgaa gcccgtagaa aagcccgatt cgtccaatcc caagccgtct gaaaacccga
     5161 acgttgggac actggggggc ggtgcttccc ccgctgtcgg aaatgcgccg ggtggcggaa
     5221 gcctcggagc atccgacggc ggaggaagca caggcgcggg gaacggcggt aataacggtt
     5281 caacggcaca aggaagcggc aaaggcaaag gggacggcga agacagtgaa aaaatgcccg
     5341 atgttcccaa gtatggcgag cctgattggg gaagccttaa aagtgacgga cggtttggaa
     5401 gttatgcaac tgcaaccgcg ttctcaacgg gagggcattg cataaatgat ataaggttgg
     5461 atatgggaca gttcggcagc cacacgcttc aaatgggctt tctgtgcgat gtattgaaaa
     5521 agctgagata tgtttttata gccatggctt acctctattc cgcaatcttg gtttttaaaa
     5581 ccgtaaacag tttgaaaggt taaaaatgcc aagattgatt gtcgcattgt tcatggcatt
     5641 ggtgccgatg cttaaagact tgttttttaa aattctcgca ggtcttggcg cgtcgtttgt
     5701 ctcatatgag gcgttaagcc tttcaaccga tgccattttg aaatattttc aaaacgccta
     5761 tgggaatata ccgcccgata ttttaaatat gtttgcactg gcaggcattc ccgaagcatt
     5821 aaacatcata ttcggcggtt tctcgttctc gttcggcata tggtcttcct accgcgtttt
     5881 aaaattccta aaatgaaagg caaagaatga ttacattaat tacaggcgtt cccggttcgg
     5941 gcaaaacttt atccgtcgtt tcggacttgg cgaaaaagat aaataatgag tggaaagaca
     6001 ggaagatttt tattgaaggc attccggaat taacgataga aacaacgccc attcccgaag
     6061 gtcattccat taatgatatg cacgtttggc ttcaatatcc cgaaaataac ggctctgtcg
     6121 tcatcataga cgaagcgcaa aatgttttcc cgccgcgctc ccctgccgta aaagcaccgc
     6181 ctcttgtcga atggttgcac gttcacaggc attcgggcat agatattatc ctgataacgc
     6241 agatgcccca acgcatagat aagcacgtcc gcgatttggt aggggcgcat tatcatatcc
     6301 ataaaacccc gctgggcatt tttatgcgtt atttttggga ctattgtgcg aataatccaa
     6361 ggtcagagtt cgccaatgca cgccccgaag tctataagtt ggataaaaag gcgttcgggc
     6421 tttataaatc agcggaaatc catactaagg taaaaacccc gaaaagccgc gttttatata
     6481 tcatccccat cgcattggta ttgttcgccc tattctttta tttgggctac aagctattat
     6541 tggggctggg taataaggac ggaacagagg aaggagaagc taaaacgcaa acaatcgttt
     6601 cggaggaaca attagaacaa gtcaggggca tggcgtataa ggcatcgggc gaagccggaa
     6661 gaaatatagg caatcagttg ggctcggaca aagaaaatca gaatttgacg aaagagatgt
     6721 tagaacccac aatagacggt catcccgaat caaaaccgat ttataacggg gtcaggcagg
     6781 tcagacaaat ggagttcccc gttgcctgtg tcaaatcgtc aaattcatgc aactgctatt
     6841 cagggcaggc aaccatttta aaagagatag acaaaaaaac ctgtatcgat tacgtcgata
     6901 acggaatgcc gttcaatccg tataaagaag aacaaagaga aattaagata gataccgacg
     6961 aacagaaacc tttaaaaaaa caagtattag tgatggatgc ggcaaaatag aaaaccgccc
     7021 ttaatcgggc ggttatagtc gtgggttatt gacttatcag tatgataacg gctagaataa
     7081 gccgtatatc aatcgttata gtcaaaagca gtttaccaat tcgcaaagtg atctgcattt
     7141 tgatttatcc tgtaaagttt aaaaactagg caggaatgca aaaatcccct tgttgtcagc
     7201 ttggggattt ttgtttgtcc ccaccgctct tttaggtttc tcgcctctcg cgcctgaatc
     7261 tatgtcataa agttcctttc attcaaaata aaaatctttc ggtttcagcc cccgccctct
     7321 caggatggct tgagcggagt gaagggggtt aactgctaga atggctgttt tttttaaagt
     7381 gtctcagtct ggtatcgctt cgttcggggg ttgtaggtgc aggaaaatag ggcagaaaaa
     7441 aggaaaaggg ggaagctttg taaagattgg gcgcgctttt tgcccaatct ttacgaatac
     7501 ccccttttcc ttttttctga actgtttttc aataccggaa acccactaac ggagtgatac
     7561 cggactgaga tacgcctaaa aaaataagac attcgggtcg caacagaaac ctttgccaaa
     7621 acctgtaata ttcttagaaa aagacgtaac ttgtcattat gcgaactatc ggaaacagtt
     7681 gtacgtgtcc ctgtggtctt tccaagtagg aaaattaaag tatggccaat gcggctgaat
     7741 gtatagcccg gagcatccgc gtatccgaag gtactgaacg acatgccctg catccctttc
     7801 gacgcttcca tccagccggt attgggaaat acgttgacct tcaatataat atacaggcag
     7861 ccgacacaca ggatatgccg ctgctttttc atcatttctt ctgtcaaatc cttggaacgg
     7921 tcgatttgaa aacacggctt tacatacgcc ccagttccct ttgcagggct tgaatatttt
     7981 gctgcctgtc caatacattg ctttgtaatg catttatttc ttgatggttg atgttgccgc
     8041 cctttgccag acgtgcttgt gataacattt tttgggcttc aaccaatgct ttgcgttcgt
     8101 tgctcaattc tgtttcgaga atggagcgtc tgctgttgtt tgagggtgct tgttgcggcg
     8161 gcggcgtatt ggattttgcc ggcttggata ctgttttgac cggggcttta tatttgacaa
     8221 cctgtccgcc gtttgacggt gatgataccg gttcgggcgt ttggggcggg atatagcgtt
     8281 cgctgctgta gttgccgatt gggggcaaat cggttgagtg gcagcttttg gacggcttgg
     8341 tggtgtaaac ggtttctccg ttgattgtgc aggtgtagat tttggccgca ttcgcaccca
     8401 atgggcttga aatcagggaa aagttgatta ggattaaggg gagttttgat ttcataatgt
     8461 gcttgatttt cggataatca tttgattttt tggtattttt tataatgctt tcttggcgtt
     8521 ttacgggctt ttcttttcgg ttggttgctt ttgattttct ttcggggctt tggcagcctg
     8581 cctgttcttt ttcccggcag gttttttgtt tttcttttta ctttctatgt gtattttggc
     8641 ttcttgactg agttttttaa ttttcaggcg gtatccgcct ccctgatggc tgctgatttt
     8701 aggtaaatcc gcatcggcgc acgatcctgc tggggctgat gtatatacgc ttttgccatt
     8761 tgagttgcaa tggtatacgg aggcttgcgc cgccgcgccg gaaagggaca ggagacccaa
     8821 ggcggcaaaa agtctgatgt ttataccggt aaaaggcggt gataacgccc gaattatacc
     8881 gttattggca ggcaaagata agcaccctgc ccgcgcttct ttatcgctcg gcaaactgtt
     8941 tctcgatttc agtttcaatc cgttccaatt cttcttgaca agccagccaa acctcttcga
     9001 tttgggcaag ttgtgttttg acttttgcca gctgggataa ggtattttgc aatttttctt
     9061 tgtttgcttc aaggtaagcg tcttcttgtg ctaaaaatgc ttcacatgcc gtctgaattt
     9121 cggaaagctg cgccatttct ttttcggcac ggtctatttt ctgctgtatc ggcttgccgc
     9181 gtcgggcttt ttcctgacgg atttgcgctt cgatgcgctt ggtgtctttg cggctttggc
     9241 tttgtgcgga tgctgcgggt gcggcggcgg cgttttcctg tgccaaacgc cattggcggt
     9301 aatcgttcaa atcgccgtcg aagttcttca gacggccttt gtcgatcagg aggaagctgt
     9361 cggtagtcgc ttcaagcagg ctgcggtcgt gcgatacgat gattaaggcg ccttggaaac
     9421 tttgcagagc gagcgtcagg gcgtggcgca tatccaagtc cagatggttg gttggttcgt
     9481 caagcagcaa caggttcggc ttttgccaga taatcatggc aagggcaagg cgggcttttt
     9541 ctccgccgga aaaaggttcg gttttctgta acgccatatc gccaacaaaa ttgaagccgc
     9601 cgaggaaatt tcggatttct tgttcgcgta ctttgggaga aagctgctga atatgccaaa
     9661 cagggttttg gtcggcgcgg atggtgtcga gttggtgttg ggcaaaatag ccgatattga
     9721 gtttttcgga acggacgatg ctgccggaaa gcaaatcgat tttgcccgcc aaggctttga
     9781 taaaggtaga tttaccgctg ccgttgacac ccaatagccc gtagcgtgcg ccgctttcca
     9841 gcgacagggt aatgtcatgc agaacggttt tgccttcgta acccaaatca gcgtgttcta
     9901 gctttaacaa aggattgggc agatggtcgg gatggtaaaa ctcaaaggaa aactcgctgt
     9961 ccagatgcgc gggcgcaacg cgttctagct ttgccaaagc cttcatgcgg ctttgcgctt
    10021 gaacggcttt ggtggctttg gctttgaagc ggtcgataaa ggattgcaga tgtttgattt
    10081 gcgcctgctg tttgacatag gcagcttgtt gttgcgcgag acgctgcgcg cgttcgtttt
    10141 ggtaaaaatc gtaattgccg ccgtattgcg tgagtttttg ctgcgataat tcaatggttt
    10201 gggtagttgc cgcgttgaga aaatcgcggt cgtgggaaat gatgatttgc gtgcagggta
    10261 aagaggcaag gtggttttcc agccacaaga cggtttctaa atccaagtgg ttggtcggtt
    10321 cgtcaagcaa gagcaaatcg gcgcggcaaa tcagggcttg cgcaagattc aagcgcatac
    10381 gccagccgcc ggaaaaggat ttgacggggc ggctgtgttc ttcttgcgaa aaacccagcc
    10441 cgttcaacaa ttttgccgcg cgggccggcg cggtataagc gtcgatttct tccaatttgg
    10501 catgatattc cgcctgcttc atgccgtcat tttgcgcttc cgcctgcctc aatgccgtct
    10561 gaaaagcctg caactcggca tcgccctgca aaacgtaatc caaagcggaa atatccaaat
    10621 cgggcgtttc ttgggaaacg gaagcgagcc gccagttttt cggaatcgag acatcgccgc
    10681 cgtcctgagt gattttaccc ttgattaagg caaacaggct cgatttgccc gttccgtttt
    10741 tgccgatcaa accgacgcgc tgaccgggat tgacggtagc gttggctttg tcgagcagga
    10801 ctttcaaacc gcgttgcagg gtgaggtttt tgatttcaat cataacggaa acatcgtcgg
    10861 gcgggaaaag cccgtatttt acctgaaagt cagtgccgat gccgtctgaa acgggaaatt
    10921 tacggctgaa gccaagccca agccctgcgc ccttccgagt gcaggaaaac caatgtcctg
    10981 aatgccgaat cggtattcat acattccacg ccgattccga ttcgggaaaa atccgccatg
    11041 attttgggat ggataaactc ctgagccgcg cccgtcccga taatcaatat ttccggatag
    11101 tcatccgctt tgacatcaga caacagatta tccggagtca gttctgacaa tgactgccat
    11161 ttcgagaggc cggcagaatc cctatgcagc agcacaggct tattgaaatg tctgccggac
    11221 agccggattt cacccgtgcg gcggtcatac tctgcaaaat gttcgtctat cggattttct
    11281 tcaaataaca tttttttatc ctgttgccgc ttcatctgta tcaggagggg tgcaaaatca
    11341 gacaaattca tgtaggatta gcggatttca tctgacctct cctgctgatt tcagacggca
    11401 tttgattcaa agtgcggcac aattatatcg gcagcggata ttttcgtctt tcaatattta
    11461 catttcagtc ggcttacaag gagacacaat gaagccagta aacatcggtc ttttaggttt
    11521 gggtacggtc ggcggcggta cggctgccgt gttgcgggac aacgcggagg aaatttcccg
    11581 ccgcttgggg cgcgaagtgc gcatcagtgc cgtatgcgac ttgagcgaag aaaaagcccg
    11641 ccaaatctgc ccgtccgcag cctttgtcaa agatccgttc gaactggtcg cgcgtaaaga
    11701 cgtcgatgtc gtcgtcgaat tgttcggcgg cacgggcatt gccaaagatg cggtgttgaa
    11761 agccattgaa aacggcaaac acatcgttac cgccaacaaa aaactgctcg ccgaatacgg
    11821 caacgaaatc ttcccgctgg cggaagaaaa aaatgtcatg gtgcaatttg aagcggcagt
    11881 agcgggcggt atcccaatca tcaaagccct gcgcgaaggt ttggcggcaa acaggattaa
    11941 atccatcgcc ggcattatta acggcaccag caacttcatc ctctccgaaa tgcgtgaaaa
    12001 aggcagcgcg tttgccgatg tactgaaaga agcgcaggca ctgggctatg ccgaagccga
    12061 cccgaccttc gacatcgaag gacatgacgc gggccataaa atcaccatca tgagcgcgct
    12121 ggcattcggc acgccgatga acttttccgc ctgctacctc gaaggcatca gcaaactcga
    12181 cagccgcgac atcaaatacg ccgaagaact tggctaccgc atcaaactgt tgggcatcac
    12241 ccgcaaaacc ggcaaaggca tcgagctgcg cgtccaccct accctgattc ccgaaagccg
    12301 cctcttggca aacgtcaacg gcgtgatgaa cgccgtgcgc gtcaacgccg atatggttgg
    12361 cgaaacctta tattacggcg cgggcgcggg cgcattgccg accgcttccg ccgtggttgc
    12421 cgatatcatc gacatcgccc gcctggttga agccgatacc gcccaccgcg taccgcatct
    12481 ggcgttccaa cccgcgcaag tccaagcgca aaccatcctg cctatggacg aaattaccag
    12541 cagctactac ctgcgcgtcc aagccaaaga cgaaccgggc acgctggggc aaatcgccgc
    12601 gctgttggca caagaaaacg tgtccatcga agcactgatt caaaaaggcg tgattgatca
    12661 gaccactgcc gaaatcgtga ttctgaccca cagcacggtc gaaaaacaca tcaagtcggc
    12721 aatcgcagcc atcgaagcac tggattgcgt ggaaaaaccg attaccatga tccgcatgga
    12781 aagcctgcat gactgagccg aaacacgaaa tgccgacgga agagcaggtt gccgcgcgca
    12841 aaaaagcaaa agccaaaatc cgcaccatcc gcatttgggc atgggtcatt ttggcgttgc
    12901 tcgcttcaac cgccctgctc tcccaatgcg cgatgtccaa accgcaggca aaacagaaaa
    12961 ttgtcgagtc ttgcgtgaag aatattccgt ttgccgaaaa atggcaaaac gatttacggg
    13021 cccgcggttt agattcaaac aatacccgcc ttaccgtcga ctactgcaaa tgtatgtggg
    13081 agcagccttt ggacagattg agcgagaaac agattagatc cttcggcaaa ctcggcgcac
    13141 aagaacagct tgacctgctc ggcggcgcaa atgcctttga agcacgtgac aagcagtgtg
    13201 ttgccgattt gaaatcagaa taatgtggac cgataaaaaa gccgattctt taaagaatcg
    13261 gcttttttca taaaaaacgg cttacagtgc gtctttcaaa gctttgccgg cgcggaattt
    13321 aggcgttttg gcggcggcaa tggtcagagg ctcgccggtt ttggggttgc ggccttggcg
    13381 ttccgcacgt tcgcccacgt agaaagtacc gaaaccgacc aaagtaacgg tgtcgccttg
    13441 tttcagggcg gtggttactg cattggtagt ggcatccaaa gctttttgtg cggcggcttt
    13501 ggaaatgtcg gcttcttgag caatcgcttc gatcaattca gacttgttca caatcagtcc
    13561 cttcctgtct taaaaaatga tgaaatgccc gaatactcgg ggtttgtact gcttgagcaa
    13621 ctttcgcttt atagcaattc tgaaattgcc gtgtcaagca aaaaatacgg aatcacccta
    13681 tttgacaggc tttcaggacg aaaccgcatt tttacaacac atttcctgcg tttcaatgtt
    13741 tggttgccct gctgcggggt tttggttttg aagcggattc cgccgccgct tccgcaccag
    13801 aaggttctgc ccaaggctca ggctggcttt ccaaacccag agccaatacc tcgtctatcc
    13861 atttgaccgg atggatggtc aggccggttt tcacgttttc agggatttct tccaagtctt
    13921 tgaggttgtc ttttggaatt aaaacgtgtt tgatgccgcc gcgaagcgca gccaacagtt
    13981 tttccttcag accgccaatc ggcaggactt cgccgcgcag ggtaatttcg cccgtcatcg
    14041 ccacatcggc gcgtaccggg attttggtaa aggcagatac cgccgccaag gtcatcgcaa
    14101 tacccgcact agggccgtct ttcggcgtcg cgccttcggg aacgtggatg tggatgtctt
    14161 ttttctcgta aaaatcagga gccaaaccca ctgattccgc acgggagcgg acaaccgacc
    14221 acgctgcgga cacggattcc ttcatcacat cgcccaactg gccggtgcac tgaatcacgc
    14281 ccttacccgg caatgctgcg gcttcgacgg tcagcaattc gccgccgact tccgtccacg
    14341 ccaaaccggt tacttgtccg atacggtttt cgctttcggc aacgccgtaa tcgaagcggc
    14401 gcacacccaa atagtcgtgc agatttttct catttacttt aaccgccctg ggcttggctt
    14461 ttccggtttt tttggttttt gagtcttcgt ccaaggtaat ctgcatcacc accttgcggc
    14521 agattttggc aatctcgcgg tcgagcgaac gcacgcccgc ctcgcgggtg tagtaacgga
    14581 taatatcgcg caccgcgctt tcttcgattg ccaattcccc ttcttttacg ccgttgcgct
    14641 tcatttgctt cggcacgagg tactgcatcg cgatattgat tttttcgtct tcggtatagc
    14701 cggacagacg gatgatttcc atacggtcga gcagcggtgt cgggatattc aggctgtttg
    14761 aagtcgcaat aaacatcaca tcgctcaaat cgtaatccac ttcggcataa tgatcggcga
    14821 acttgttgtt ttgctcggga tcaagcactt cgagcaacgc gctggcggga tcgccccgga
    14881 agtcgctacc caatttgtcg atttcgtcga gcaggaacaa tgggtttttt acgccggctt
    14941 ttgccatatt ctgcaaaatc ttaccgggca tggagccgat ataggtgcgg cggtgtcccc
    15001 ggatttcgct ttcgtcgcgc acgccgccca aagccatgcg gacatatttc cgccccgttg
    15061 ctttggcgat ggattcgccc aaagaggttt tgcccacgcc tggagggccg accaggcaca
    15121 gaatcgggcc tttgagtttg tccatacgtt tttggacggc gaggtattcc aaaatccgtt
    15181 ctttgacttt ttccaggccg tagtggtcgg tatccagcac caatccggct ttggcgatgt
    15241 ctttgctgac gcgggatttt ttcttccacg gcagttcgag cagggtgtcg atgtagttgc
    15301 gtacgacggt ggattcggca gacatcggcg gcatcatttt gagttttttc agttcggaca
    15361 ggcatttttc ttccgcttct ttgctcatcc ccgccttttt gatgcctgct tccaaggcat
    15421 ccagttcgcc gttttcgtct tcttcgccca attctttgtg tatcgcttta atctgttcgt
    15481 tcagataata ttcgcgctgg gatttttcca tttggcgttt gacgcgtccg cgtatgcgtt
    15541 tttcggcctg cataatgtcg agttcggatt ccagctgtgc cagcaggaat tccatccgtt
    15601 tgccgatttc gggaatttcc aaaatctgtt ggcgttgcgc cagtttcaac tgcaaatgcg
    15661 ctgcgaccgt atcggttagc cggctgtttt cggcaatgcc gttgatgctg ccgataattt
    15721 cggcggggat ttttttattg agtttggcgt attgttcaaa ctgcgccaac agggtgcggc
    15781 gcacggcttc gaggtcggta ttgccgcccg tgtcttcttc cacgaccgcc tctatatggg
    15841 aaacgaacag accgcccgtg tcttcgatgg tcagaacacg tccgcgatac agaccttcga
    15901 ccaatacttt taccgtgccg tccggcagtt tcaatacctg taagacttgt gcgacggtac
    15961 cggtctgata caggtcggcg gcaaccggtt cttctagcgc cgcatcggtt tgtgccaata
    16021 ggaaaaccgg ttcctcgcgg gtaatggcgt tttccagtgc ggcgatggat ttcggcctgc
    16081 cgacaaacag cggcagaacc atatgcgggt aaacgacgac atcccgcaaa ggaagggttg
    16141 ccaaggcggc atattcctca aaatgctttt ctttttgtgt cataggtact ctcttgtgtc
    16201 tgacagattg ccgattttcg cgtacattgg ggttgaaggt attatttcaa gcatatgtgg
    16261 tttatttatg gagtttgatg cgatgccgtc tgaaacattc cggcttcaga ctgcatgggc
    16321 ttggaaagac aaggcgggaa caaaaaactg ttctgtgttg ccgctccttg ctgtaccatc
    16381 cgtatggttt acggttctgc cgccctattt tcaaaacatg acgcaggtat cccatgtctt
    16441 cttttatttt tcccgataac ggggccgaat ggcgcaacga aagtgtgcaa aagccgccca
    16501 aaggttggca ttatgtccgc gaaagcggtg cagacggcat tttgaaggct gcctatcaaa
    16561 atattgcaac tgtctggcag ggcgatttcc acaatgccaa acaggtgctt tctgcaatga
    16621 agaagagggc tcgcaaacct gccgccgtcc gttccgatgc ggatatcgcc gcccttttcc
    16681 atgcccaccg tatgaagcag gcgcagcaga gccgtattct gaatatgctt gccgttgaaa
    16741 tccgccccgg ttttgtgttg gacaacaaac gcgcgcccga tatacgcgcc gccctgctcg
    16801 acgtgtacgg agaggcggac ggcaaaccgt ttttcctgcc gctcaatctg ctgctggggt
    16861 ttatgggtgc gcacgagtgg cataagaaag gggttgccgt tccgcagctg ggcggcagca
    16921 tacacgttcc tttcggcgta ttctcgccgt tgcgcggcga atacctcgac ctgctcgccc
    16981 atgcgccgtc aacgggtttt cagacggcat tcgatatcgg gacgggctcg ggcgtgcttg
    17041 ccgccatttt ggcgaaacag ggcattcctt ccgtcatcgg cacggatacc aatccgaaag
    17101 ccgtcgcctg cgcccgtgcc aatattgccc gtttgggctt tgaaaaacag gttgagatac
    17161 gggaaaccga tctgtttccc gaagggtttg ccgatctgat tgtctgcaat ccaccctggc
    17221 ttcccgccaa gccgacttcc gccgtcgaat ccgcgttata cgaccccgaa tctgcgatgc
    17281 tggctgcgtt tttgcgggat gcgccgaaac atctgaatcc cgacggagaa atccgcctga
    17341 ttatttccga ccttgcagag catttggggc tgcgccctgc cgattttttg gaaaaggcat
    17401 ttatccgggc gggtttgcgt gttgccgata tgatgaaaac caagccgaag cacaaaaaag
    17461 ccgcgaatcc gagcgatccg cttgcttttg cgcgaacccg ggaaaccact ttcctatacc
    17521 gtttgaaaaa ggcataaggg gcggcggcgc ggcattcggg cggattattc ttgtgaaaat
    17581 acccgctcga gcatactgcc caatgccgtc tgacgcgttt tgacagtggc ggcagcttgc
    17641 cggaaggttt cttctccgcc gaagaatacg aacttctccc tcgcgcgggt aatggcggta
    17701 tataacagct ccttactcaa tccggacaat gcatcgtccc cttcgtccga aggtgcggcg
    17761 gaaggcggca gcagccagac ttcccgatat tccgaacctt ggcttttgtg gacggtcatg
    17821 gcgaatgcgg gttcgaaatc gggcaggcag cttaccgcta cctttttaaa tccgtccgca
    17881 tcggcaaaat aggcggcaag gctgccctgc cgtccgacat cttccataat cagtccgatg
    17941 tcgccgttga acagttcaag cgcgtagtcg ttctgcctga tcataatcgg ctctccggcg
    18001 aaataggcca gatgttccgg tatgttcatt ttgcggcgta catggctgca ataggctttg
    18061 ttgaagtctt ccgcatcctg ccgccaagct gccaggacca cgatatccga gatgcctgcg
    18121 tatgcggctt cgatattgcc gtcttttacc gcctgccaat aggctttgtg cgcccggtac
    18181 aacctttcga ctcgagcgtt cggactgcat tccgaatgtt ccagttcatc cggaaaccgg
    18241 tcaaacaatg cccacgcccc ctcatcgccc gatacggcgg cacgggcaag gcagccgatg
    18301 ccgctgttgt cgccgaaacg gtggctgaac gacagatggg cggtgttttg cgccaacacg
    18361 ggcggatttg cgctgacgct gaaaccgtgt tccggaagga agccggccag cctttggtgc
    18421 gcttctccgt ccaaaacggt tttttgcgac aaaacggaca gcaccgcccc gattccgacg
    18481 gacgggagct ggttttcatc ccccagcaga atcacgcgcg cgccggtttt gaccgctttt
    18541 aaaagttgca gcatcaatgc cgtatccagc atagaggctt catcgataac caatacgtca
    18601 aacggcagcg ggtaaacagg gtcgaacgcc gcctgcattt tgggcgggcg cagcttcagc
    18661 agtcggtgga cggtttgccc ttccagtttg agcaaatggc ggcggacggc ctccggcgcg
    18721 tcaaaaccgt tgattgcacg gtgcagcgcg cgcgccatat gtgccgccgc tttgcccgtc
    18781 ggtgcggcaa gcgcgatgtt gggaagattt tcgtcttcac cgcaaatcag cgccagcagt
    18841 ttggcaaccg tcgtcgtttt acccgtcccg ggtccgccgg taatcaccat aaaaggctgc
    18901 aacagtgcca aggcggcggc atcgcgctgc ccttcgctgc ccgtgccttg aaaccatttt
    18961 gcgaggtttt gccgcgcgcc tgccgcgtcg ggggcggacg tgtcggctgc cgccaagcgt
    19021 tttatctcgg cagccaaatc gtattccaac tgccacatcc tgcccaaaaa cagccttctg
    19081 ccttccaaaa tcaaaggcgc ggcggatgtt ccgaccacgg gtgcgagtgc cgacagcgcg
    19141 tcagcctcgc caccgctcaa acggataaac gaatgaccgt tttgcaatgc ctgaaacagg
    19201 cgttcggtgc agtttgcaag cacttcgctg cctgaacccg catagcgtgc caaaaaccag
    19261 attgccgccc ttgccgccgc ttgggcaaat tcatctgtct gccgttccat tgtattcctt
    19321 gtcgaaatgc cgtctgaagg cgtggggctt cagacggcgc ggtgttgttt cggctgttta
    19381 ggcgtttgcg ccctgtttgg ggtgcaggct gccgtctttc atgaccatca cgcgctcgaa
    19441 gcggccggcg agttcgtcgt cgtgcgttac gaccaccagc cccgttccca attccgtttt
    19501 cagttccagc atcatatcca aaacattcct ggcgttcgca cggtcgaggt tgccggtcgg
    19561 ttcgtcggca agcaggcatt ttggttgcgt aaccaaggcg cgcgcaatgg cggcacgctg
    19621 gcgttcgccg ccggacagtt cgcccgcgcg gtgcgtcgaa cggtgtttca gtccgacctt
    19681 ttccagcatc gccattgccg tttctgccgc ctcttcccgt tttttcttgc cgatcagaag
    19741 cggcatcatc acgttttcca gtgccgaaaa ttcaggcaga agatggtgga actggtacac
    19801 gaaaccgaga tggcggttgc gcaggatgcc cagttgtcgc tggcttaatg tacgcaaatc
    19861 ctcgcccatc agcagcaccc tgccttcaga cggcatatcc agcccgccca gaatatgcag
    19921 cagcgtcgat tttccgctgc ccgaagaacc gatgatgccg gtgctttccc ccgcgcggat
    19981 ttccaaatcc aagccgtgca gcacccgaac gtccaaaccg ccgtcgcggt agcgtttgcc
    20041 cacgccttcg catttcaaaa tcaactcact cataacgcaa agcctccgcc ggttgggttt
    20101 ttgaggcacg ccagctcggg tagagcgtgg caacgaaaga cagtcccaag gaaatgcagg
    20161 caatcagggc aacgtcgccc atatcgacat cgctgggcag gtagtcgata aaataaacct
    20221 gcgaattgat gaggtggaca ccgagcaggt tttcaaaaaa tgccacgact ctgccgacgt
    20281 tccaacccaa aagcacgccg cagaccacac ccgccagcgt gccgaaaaag cctgaaaacg
    20341 cgccctgcac cataaaaatc ttcatcacgc cgccagggga aaggcccaaa gtccgtaaaa
    20401 tcgcaatgtc cgcctgcttt tccgtaaccg ccatcaccaa ggaagagaca aggttgaacg
    20461 ccgccacggc gataatcagc gtcaggatga tgaacatcat ccgtttttcc aactcgaccg
    20521 cctcaaaata gcttcgattg ctgaacgtcc aatcgcgcac ccaaaccgta tccctttgcg
    20581 cctccggaat cagtgttgcc gtcaaggcgg gggcgttttg cgggtcggcg agtttcagcc
    20641 gcagccccgc aacttcctta tccaagcggt acagtacgcg cgcgtcttgg atatgcgtca
    20701 tcgccaatga gttgtccact tcgtaaacgc ccgtcttaac cagaccgacc acggtaaact
    20761 gcttcaggcg cggcacgact ccggcagggg taacgttgcc ctccggcgtg atgacggtaa
    20821 ctttattgcc gacttccgcc cccaaagcct ccgccaagcc gacaccgagg ataatgtcaa
    20881 actcgcccgg aatcaggtct tcaaatttgc ctgccggcat tttgtcgcca tattccacca
    20941 ctttgcgttc ttcagacggc aaaatgccgc gcatctgcac gcccctgatt tcgcccgcgt
    21001 ttgccagcag agcctgattg gaaacatagg gcgcggcagc caaaatacct ttgcggtttt
    21061 ccgtaaaccg aagcaggttg cgccaatccg tatccgtatt gtcgatatag ccgatttcgg
    21121 cgtgcggcgc gacattcagg agctgcccgc gtatttcttt ctgaaagccg ttcataaccg
    21181 acaagacgac aatcagcgcg gttacgccca aggcgattcc ggcaatcgaa accatcgtga
    21241 taaacgacat aaagccgttg cgctttttcg ccctgagata cctcaagcct atccaagcct
    21301 ctagagaaaa cataacgcta ccttaaaaat gtctgcaaac gtgccgcccc ggacggcggt
    21361 ttgggggcgg cggcaaaagt ttattgtacc gtaaaaccca ggcagcgtcc gaacgcccga
    21421 gtgcggggga cggggcggca gagcgggcgg aaaacttgca caacgcgtca aactgcccta
    21481 tcctttcctt cagaaaaacc gtttcttgag gaaaacaatg aatatccgaa ctgcttttgc
    21541 tttgtgcgcc atcgccttat ccgccgctgc ggctgcctac gccaaagaaa tcaaaatcga
    21601 tgccaacaac acgccttatt ccgaagccga cgcgcaaaag ctggcggcaa cggcagtcgg
    21661 tatgggtgtt aaggaaccta tcagcctgaa cggcggcagc ggcagcatta ccgtgtccgg
    21721 cagcagcgcg acgcagtgcg tgttcaaagt cggcaacgga ggcgcgttgc agattcaagg
    21781 gctaaactgc aagtaaaccg cccggaaaaa tgccgtctga agccttcaga cggcattttg
    21841 cattggcggc gttatgcccc gccttcttta atcaggcggc gttcgtacac cgcctgcgcc
    21901 agcgttcccg catcgacata ttccaattcg ccgcccaagg gaatgccctg cgacagcctg
    21961 ctgactttgt aaggcaggtt tttaaaaaac tcggacagga catacgccgt cgcattgcct
    22021 tctgcggtaa aagcggttgc aataatgatt tcttcgactt ccccgccgcc cagccgttgc
    22081 gccagcctgt ccaatgcgat ggcggatacg tccattccca atgccgtatt gatttgcccc
    22141 atcaggacga aatacagccc gtcgtggcag tttgccgctt ccatattcga cacgtcggca
    22201 ggcatatgca ccaccatcag ccgccgcccg tcgcgtgttt catcggcaca aatatcgcac
    22261 aatccgcctt cgcaaaacgt gttgcacatc gcgcaatggt aaacctgctt caatgccgtc
    22321 tgcaaggcat ccaccagttt ttcagcctct ttgcgcttgt gttggagcaa atgatacgct
    22381 atccgctgtg ccgatttcgg cccgacgttg ggtaaaacct tcagcgcgtc gatcaatcct
    22441 tggaaggcat cttgtttttt gtggctcatc atattccgcc gtatgggaaa acggccggaa
    22501 tattccgacc gttattttgt caacaaaagt gtcaattact gaccgtcgcc gttgtcgacc
    22561 gattgcgctc ctttggtctg tttgattttg ccgttgaaat aacgtatcaa caagtcgaaa
    22621 gtattggcag actgctgttg cgccaaagcc tgttttgcaa gcggaagctg tgcggcgata
    22681 tcatccggcg gggttacagc ctgtacttcg acaatcacgg gtgccggcag accgatcagc
    22741 ctgacgtagg cgggtttgcc gtttgccggt tttgctttca gcagttccgc ataagcctcg
    22801 ggcggcatgg actgccttgc ctgctgtgcg cccaaaacgg acacttccga ccatttcacg
    22861 tcaacagcct tgccgccgtt cagttgggta agcacgtctt ttgccttgtt ttcggcaagt
    22921 ttggcggctt cggtacggat ataagcctga cgtaccgcgt ctttggcttc ggcaaacggc
    22981 agggttttct cttcgcggac ttctttggcg cggacgaccc acgcggtttc gctgttgatg
    23041 gtcagcactt ctgaattgtg ttttttcttc aatacgtcgt cgctgaaaac ggcattgatc
    23101 aggttttcgg gcataccgga catttgcgca tcctgcctgc tcagccaagt ttcttgggtt
    23161 tcgactttca aaccgctgtt tttggcggct tcggcaagcg aggaaggatg gttgaacgcg
    23221 tcatcgccca gcttttcttt tgccttattg aagtcggcaa ccgccttttt cattttcaat
    23281 tcgttttcta cggcggcttt ttcctgctcg aaagaaggtt tggcttcatt tgccggcaaa
    23341 cgcgccacgc gctcttcaaa cgcatttttc acttctgttt cgctgacggt ctgtttgtct
    23401 gcaaagtctt tcagattcaa ggcgacatat tccaatttga ccgctttggg aagcaggtag
    23461 tcttttttgt ttgcgttata aaacttctgc aaatcggctt cagacacttt gacttgggcg
    23521 atgaattcgt cggggttgaa agtgtgcgaa cggatggtgc ggttgacctg cgtcagcctg
    23581 atcagctgtt ccgcctgcgc gtcgccgacc aatacgccgt tttggacgag gtttaccaaa
    23641 ttctgcaagg caaactgatc gcggatttct tcgacaaact ggtcttcaga catatgacgt
    23701 tgggaaaggt agcggtttaa aagcgcgtgg tcgaatttgc cgtttgcgtc gtggaaattg
    23761 ggatcgtcca cgataatctg cttgatttgt tcggaagaaa ccgaaatgcc catcagcttc
    23821 gcgccctgtt tcaggtaggc gcgttgcagc agggattgga acaccgcgtc gcgcgaaggg
    23881 ctgccgccgt ccgcctgttc attttgcata gcgttgttga tggagtggtc gctgattttt
    23941 tcgtcgccca cttggacgat gtagtcggca cccggatggg ataccgtgct gaccccgaag
    24001 ccgacgaagg ttaatgcaat cagccccaaa aggacttggg cgggcgttct gtatttttcg
    24061 atggaatgga acatattttc agattggaaa tgggattggg aaattcaagt cgggtattgt
    24121 aacggttttt atccctgtct gcacagggct tgccgattga agatgccgtc gtaggtttct
    24181 tcgctgaagc cgacataaac cctgccgccg cactccaata cgggacgctt gatcaggctc
    24241 ggcatttcgg acatcagttt gacggcctcc gccgtcgagg acagcacttt ttgctgtgtt
    24301 ccggcatcaa gtttgcgcca gctcgtcccg cgtttgttga gcagggttgc caaaggcact
    24361 tgttccagcc acgagcagat ttccgcttca gacggcctct gttttttaaa atcccgaaat
    24421 tcaaactcca agccgtatcc ggcaagcctg tttttggctt ttttgactgt gtcgcaattt
    24481 ggaatgccgt gaaggattat catttggaaa ccttttgtct gaaataataa aacggatatt
    24541 ttactataag tgtctgaaaa tttgcccgtc tgtttcagac agcggggcgg ttatgttaca
    24601 atccgaaaat tcgaaaaatt taatctcttg ttcaataaag gctttaccaa tcatgatttc
    24661 taccaacggc atcaccatgc agttcggcgc gaagccgctg tttgaaaacg tatccgtaaa
    24721 attcggagaa ggcaaccgtt acggcctgat cggcgcgaac ggttcaggca aatccacctt
    24781 catgaaaatc ctcggcggcg atttggaaca gacggccggc gaagtggcga ttgaaaacgg
    24841 cgtgcgtttg ggtaaattgc gccaagacca gtttgcctac gaagacatgc gcgtgctgga
    24901 cgtggtgatg atggggcata ccgaaatgtg ggcggcgatg accgaacgtg atgcgattta
    24961 cgccaatccc gaagccaccg aagacgacta catgaaagcc gccgaactgg aagccaagtt
    25021 cgccgaatac gacggctaca ccgccgaagc gcgtgccgcc gaactgttga gcggcgtggg
    25081 catttccgaa gatttgcaca atgcgaaaat ggcggaagtc gccccgggct tcaaactgcg
    25141 cgtattgctg gcgcaggcgc tgttctccaa gccggatgta ttgctcttgg acgaaccgac
    25201 caataacttg gacattaata ccatccgctg gttggaaggc gtgttgaacc aatacgactc
    25261 cacgatgatt atcatcagcc acgaccgcca ctttttgaac gaagtctgca cacacatggc
    25321 ggatttggac tacaacacca tcaccatcta tccgggcaac tacgacgact acatgctcgc
    25381 ttctgcccaa tcgcgtgagc gcgccctgaa agacaatgcc aaggcgaaag aaaaattgca
    25441 ggaattgcaa gaatttgtgg cgcggttcag tgccaacaaa tccaaagccc gtcaggcaac
    25501 cagtcgtctg aagcaggcag acaaaatcaa atcggaaatg gtcgaagtca aaccctctac
    25561 ccgtcaaaac ccgtatatcc gttttgaagc cgatgaaaaa gccaagctgc accgtcaggc
    25621 tgtggaagtt gaaaaactgg cgaaacgctt tgaaacccag ttgtttaaaa acctgaactt
    25681 catccttgaa gcgggacaac gcctcgccat catcggcccg aacggcgcgg gcaaatccac
    25741 cctgctgaaa ctcttggccg gcgcgtacaa ccccgaatat tcagacggtc tgctgccgga
    25801 cgaaggcagc atcaaatggg cggaaaaagc cagcgtcggc tactatccgc aagatcacga
    25861 aaacgacttc gatgtcgata tggatttgag cgaatggatg cgccaatggg ggcaggacgg
    25921 cgacgacgaa caagtcatcc gcggcacttt ggggcgtttg ctcttcggca gtaacgatgt
    25981 cgtgaaaaaa gtgaaggttc tctccggcgg cgaaaaaggc cgtatgcttt acggcaaact
    26041 gttgctgttg aaacccaatg tcttagtcat ggacgaaccg accaaccaca tggatatgga
    26101 aagcatcgaa tccttgaaca tggcgctgga aaaatacaac ggcacgctga ttttcgtctc
    26161 ccacgaccgt cagttcgttt cttccctggc aacccaaatc atcgaactgg acggcaaagg
    26221 cggatatgaa cactacttgg gcgattacga aagttacttg gagaaaaaag gcgtagcata
    26281 accgccggtt ggaacaatgc cgtctgaagc cgcttcagac ggcattgttg ataactttaa
    26341 aataggaagc atatgcagac ttacctcgtc ggcggcgccg tccgcgatta tcttttgggc
    26401 ttgcccgtca aagaccgcga ttgggtggtc gtcggcgcag acgcacaaac catgctggcg
    26461 caaggcttcc agccggtcgg caaagatttt cccgtgtttc tccatcccga aacgcacgaa
    26521 gaatacaccc tcgcccgcac cgagcgcaaa accgccaaag gttacgtcgg tttcagtttc
    26581 cacgccgaca aagacgttac gctggagcag gacttgatgc gccgcgacct gaccatcaac
    26641 gcgatggcgc aagatgcgga cggcaagatt atcgaccctt tcggcggaca acgggatttg
    26701 gcggcaggca ttttgcgcca cgtttccccg gccttcgccg aagaccccgt ccgcatcctg
    26761 cgtactgccc gctttgccgc gcgttacagg tttgaaatcg ccgaagaaac cataaagctg
    26821 atgcggcaga tggtggaaaa cggcgaagcg gacgcattgg ttgccgaacg cgtctggcag
    26881 gagtttgcga aaggtttgat ggaaaaaaat ccgcgcaaaa tgattgaagt gttgcgcgaa
    26941 tgcggcgcgc tcaaagtctt gctgcccgaa gtcaatgccc tcttcggcgt gccgcaacgc
    27001 gccgactacc atcccgaaat cgacagcggc atccataccc tgatgacgct gcaacgcgcc
    27061 gccgatatgg gtttgagcct gcccgaacgc tatgccgccc tgctgcacga cttgggcaaa
    27121 gccaaaacac cgtccgacat cctgccgcgc caccacggac acgacctcgc cggtgtcgaa
    27181 cccgtgcgcg aagtcaatca gcggctgcgt gcgccgaaac attgcgccga gcttgccgaa
    27241 ttggtttgcc gttggcacat tattttccac caagtcggac agcttaaaag ccaaaccatt
    27301 ctgaacgtat tgaaaaaaac cgatgccttc cgccgtcccg aacgctttca gacggcattg
    27361 aacgtctgca ttgccgacac gcaaggccgt ctgaaccgcg aacacacgcc ctacccgcaa
    27421 cgcgcacact ggttcgccct gctcgaagcc gccaatcagg cggattcggg caaaatcgcc
    27481 gccgaatgcc gcgcgcaggg aaaagcgcac cttatcgccg aacaaatcga ccgggcgcgg
    27541 ctggcacaaa tcgccccatt gcaaaaaacg tttcgagcgg cgcaagacaa aacagaaaaa
    27601 cattaaaacg tccaatgcag ccacttttat
//
LOCUS       DAXHKG010000008        26763 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.008, whole genome shotgun sequence.
ACCESSION   DAXHKG010000008 DAXHKG010000000
VERSION     DAXHKG010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26763
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.008"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            1097..2545
                     /gene="gnd"
                     /locus_tag="ACFMWP_000282"
     CDS             1097..2545
                     /gene="gnd"
                     /locus_tag="ACFMWP_000282"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HFC5890948.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTGIIGAYSLQDLVDKLEKPRKIMMMVRAGSVVDDFIEQLLPLLEKGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGMGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2608..3879
                     /gene="waaA"
                     /locus_tag="ACFMWP_000283"
     CDS             2608..3879
                     /gene="waaA"
                     /locus_tag="ACFMWP_000283"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HFC5890949.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRGERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGVLMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRSLIRPAVASLTGCLVQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGDRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTAFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKTLSYEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3920..4369
                     /locus_tag="ACFMWP_000284"
     CDS             3920..4369
                     /locus_tag="ACFMWP_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HFC5890950.1"
                     /translation="MSIYALAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGVVMAANRYLPILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            4402..5376
                     /locus_tag="ACFMWP_000285"
     CDS             4402..5376
                     /locus_tag="ACFMWP_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFC5890951.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNLGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            5445..5520
                     /locus_tag="ACFMWP_000286"
     tRNA            5445..5520
                     /locus_tag="ACFMWP_000286"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5478..5480,aa:Lys,seq:ttt)
     gene            5740..6993
                     /gene="murA"
                     /locus_tag="ACFMWP_000287"
     CDS             5740..6993
                     /gene="murA"
                     /locus_tag="ACFMWP_000287"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HFC5890952.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
     gene            7074..8252
                     /locus_tag="ACFMWP_000288"
     CDS             7074..8252
                     /locus_tag="ACFMWP_000288"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HFC5890953.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFTADAEAV
                     VKDIADVAEDDMILDIGPKSAAELADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(8319..8567)
                     /locus_tag="ACFMWP_000289"
     CDS             complement(8319..8567)
                     /locus_tag="ACFMWP_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC5890954.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8658..9575)
                     /gene="ftsX"
                     /locus_tag="ACFMWP_000290"
     CDS             complement(8658..9575)
                     /gene="ftsX"
                     /locus_tag="ACFMWP_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HFC5890955.1"
                     /translation="MSIIHYASLHIESARTALKELLRQPFGTLLTLLMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRIANVRFIGKEDG
                     LAELQSNLDQNLVSMLDGNPLPDAFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSTVRPLVDAIFKPYGLNIGWRFFYPEEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(9572..10222)
                     /gene="ftsE"
                     /locus_tag="ACFMWP_000291"
     CDS             complement(9572..10222)
                     /gene="ftsE"
                     /locus_tag="ACFMWP_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HFC5890956.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(10416..10898)
                     /locus_tag="ACFMWP_000292"
     CDS             complement(10416..10898)
                     /locus_tag="ACFMWP_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HFC5890957.1"
                     /translation="MKYLNLAAIALAATFAAHTASADELAGWKDGTAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            11022..11375
                     /gene="arsC"
                     /locus_tag="ACFMWP_000293"
     CDS             11022..11375
                     /gene="arsC"
                     /locus_tag="ACFMWP_000293"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HFC5890958.1"
                     /translation="MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIAEHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            11372..12028
                     /locus_tag="ACFMWP_000294"
     CDS             11372..12028
                     /locus_tag="ACFMWP_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HFC5890959.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            12144..13538
                     /gene="gltX"
                     /locus_tag="ACFMWP_000295"
     CDS             12144..13538
                     /gene="gltX"
                     /locus_tag="ACFMWP_000295"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HFC5890960.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWADL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITTNEKLAEMVKPRLA
                     LRDIHETSKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEASAR
                     MLRFAERLEGLEDWNTEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            13559..13954
                     /locus_tag="ACFMWP_000296"
     CDS             13559..13954
                     /locus_tag="ACFMWP_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890961.1"
                     /translation="MPSDVGIRLQTAFKRKLKMKKIFYFLMVVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQAAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            13958..14449
                     /locus_tag="ACFMWP_000297"
     CDS             13958..14449
                     /locus_tag="ACFMWP_000297"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC5890962.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGILLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(14572..17166)
                     /gene="mutS"
                     /locus_tag="ACFMWP_000298"
     CDS             complement(14572..17166)
                     /gene="mutS"
                     /locus_tag="ACFMWP_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HFC5890963.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17610..18614
                     /gene="gap"
                     /locus_tag="ACFMWP_000299"
     CDS             17610..18614
                     /gene="gap"
                     /locus_tag="ACFMWP_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC5890964.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(18684..18803)
                     /locus_tag="ACFMWP_000300"
                     /pseudo
     CDS             complement(18684..18803)
                     /locus_tag="ACFMWP_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18872..19552)
                     /gene="tsaA"
                     /locus_tag="ACFMWP_000301"
     CDS             complement(18872..19552)
                     /gene="tsaA"
                     /locus_tag="ACFMWP_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HFC5890965.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEVCIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLNRIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEIRFQIEENRATV
                     IDLSPTPL"
     gene            19667..20302
                     /locus_tag="ACFMWP_000302"
     CDS             19667..20302
                     /locus_tag="ACFMWP_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HFC5890966.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGNWQVIVNEAACRGIAPDTIETAWQEMSSAGAVILKNAEEIKKYINNQ"
     gene            20340..21308
                     /gene="waaC"
                     /locus_tag="ACFMWP_000303"
     CDS             20340..21308
                     /gene="waaC"
                     /locus_tag="ACFMWP_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HFC5890967.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFTDI
                     ARLHPFVKKIHVMKWRQWRKHLFQAETWREMGHLKQTLRQEAFNFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGLAALAYAKTYAVPKGKNAVWRNRELFAQVFGYAMPETQV
                     FGLTVPEVGRLKNLAQPYYAALHATSRDSKLWPMENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQTLMDCVAADKG"
     gene            21534..22283
                     /locus_tag="ACFMWP_000304"
     CDS             21534..22283
                     /locus_tag="ACFMWP_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HFC5890968.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIECGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            22294..23229
                     /locus_tag="ACFMWP_000305"
     CDS             22294..23229
                     /locus_tag="ACFMWP_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HFC5890969.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAVDYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            23292..23903
                     /locus_tag="ACFMWP_000306"
     CDS             23292..23903
                     /locus_tag="ACFMWP_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HFC5890970.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFTYPIRTLADVKKYLDLLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILERDLQLDCRLTVSLSLVNYEACVAAWKNTRQIEVNTEKPFE"
     gene            complement(23955..24272)
                     /locus_tag="ACFMWP_000307"
     CDS             complement(23955..24272)
                     /locus_tag="ACFMWP_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HFC5890971.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKYVVTLIRDMDNFYT
                     HEYQACHQAIEDGVELDLSTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            24430..25701
                     /gene="purD"
                     /locus_tag="ACFMWP_000308"
     CDS             24430..25701
                     /gene="purD"
                     /locus_tag="ACFMWP_000308"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HFC5890972.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDIISGLDAANQIGKVFHAGTTAKEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            25735..26337
                     /locus_tag="ACFMWP_000309"
     CDS             25735..26337
                     /locus_tag="ACFMWP_000309"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC5890973.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(26409..>26763)
                     /locus_tag="ACFMWP_000310"
     CDS             complement(26409..>26763)
                     /locus_tag="ACFMWP_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5890974.1"
                     /translation="RVYTVVVDNAKSETLLPVIKKKIMPDSIVYTNSLSSCDKLDVSG
                     FIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFPLFLKECEFRFNFG
                     TPSQQLKILRDWCGI"
BASE COUNT         6449 a         6154 c         7503 g         6657 t
ORIGIN      
        1 cccgcgcagg cgggaatcta gaacgtaaaa tctaaagaaa ccgtgctgta aacggcagac
       61 tgatgccgtc attcccacga aagtgggaat ccagaacgta aaatctaaag aaaccgtttt
      121 cccgataagt ttccgtaccg acaaggctgg attcccgcct gcgcgggaat gacggcggag
      181 cggtttctgt tgctcccgat aaattcctaa aacttaaatt ttcatcattc cctcaaaaac
      241 agaaaaccaa aaacagaaac ctaaaatccc gtcattccca cgaaagtggg aatctagaac
      301 gtaaaatctc aagaaaccgt tttcccgata agtttccgta ccgacaaggc tggattcccg
      361 cctgcgcggg aatgacggca gagcggtttc tgttttttcc gataaatgcc gcaatctcaa
      421 atcccgtcat tcccactttc gtgggaatga cggaatgtag gttcgtggga atgacgcggt
      481 acaggtttcc gttacgtatc cccatccgaa agtttattta tacacaagca atccaaagtt
      541 atctgactga aatattgtga gatttacccg caaatctcat tttttccacc acttaataca
      601 caaattcgga tgcgtactct gccaatatgc agaaaaaaga tatttgtatc gacacattct
      661 cattcctaca agttccaaac acacttccct ctcaaatctc cacaacattc ccgttcttaa
      721 aggcatcggc agccattcgg taaagaaaag cggaatgcca tctgcacaac aagcaaactg
      781 tccacaaaaa ctattcttca tgaaaaacaa tccacaggta tgcacaaaag ggaatccgcc
      841 ttaccgacac ccttttaaaa cggaaatccc aatgattttt aaaataaaaa aaagttaccc
      901 acagaaaatt tctcctatca atataatcat cgttttttta tttaattttt atattttatt
      961 tataagcctt cagggaaacg cacggtaaag cgtaaaggca tcttttcaaa aaattaaaaa
     1021 gttaaggatt gttaaacaag tgtaaatcag gtagagttgc ggtcgataaa ttaaatctat
     1081 aacggagctt cctgcaatga aaggcgatat tggcgtaatc ggtttggcgg ttatggggca
     1141 aaacctgatt ttgaatatga acgattgcgg atttaaggtt gtcgcctaca accgaacaat
     1201 cggtaaggtg gacgaatttt taaacggcgc ggcaaaaggg acgggcatta tcggcgcgta
     1261 ttccctgcaa gacttggtcg ataagctgga aaaaccgaga aaaatcatga tgatggttcg
     1321 cgcaggttcg gtggttgacg actttatcga acaactgctt ccgttgttgg aaaaaggcga
     1381 catcattatc gacggtggca atgccaatta ccccgacacg acacggcgga cacattacct
     1441 tgccgaaaaa gggattttgt ttgtcggcat gggggtctcc ggcggagagg aaggtgcgcg
     1501 gcacggcccg tctatcatgc cgggcggaga tgagcgcgca tgggaagctg ttaaaccgat
     1561 tttccaggcg attgctgcga aaacccctca aggtgagccg tgttgcgatt gggtcggcag
     1621 ggatggtgcg ggacatttcg tcaaaatggt gcataacggc atcgaatacg gcgatatgca
     1681 gttgatttgc gaagcgtacc agttcatgaa agacggtttg ggactgtcct acgacgaaat
     1741 gcaccgcgtg tttgccgagt ggaacaaaac cgagctggat tcttatctga ttgaaatcac
     1801 agcggcaatt ttgggctata aggacgaagg cggcgaaccg ctggtcgaga aaatcctcga
     1861 tacggcaggg caaaaaggca cgggcaaatg gacgggcatc aatgctttgg atttgggtat
     1921 tccgttgacg ctgatttccg aagcggtatt cgcccgctgc gtttcgtcgt tcaaagaaca
     1981 gcgcgtgcag accggcaagc tgttcgcccg aaccgttacg cccgtcgaag gcggcaaaca
     2041 agaatgggtt gaggcgttga gacaggccct gcttgcatcc aaaatcattt cctacgcaca
     2101 aggctttatg ctgatccgcg aagcgggcga aagctacggc tgggatttgg actacggcaa
     2161 cactgcgctg ctgtggcgcg aggggtgcat cattcgcagc gcattcttaa gcaatatccg
     2221 cgacgcgtat gaaaacaatc ccgatttggt gttcttgggt gcggatccgt atttcaaaaa
     2281 tattttggaa aactgcctgc cggcgtggcg caaggtggtt gctaaggcgg tcgaatgcgg
     2341 catccctatg ccttgcatgg cttcggcgat tacgttcttg gacggctaca cgaccgaacg
     2401 tctgcctgcc aatctcttgc aggcacagcg cgactacttc ggcgcgcaca cttacgaacg
     2461 caccgacaaa ccgcgcggcg agtttttcca taccaactgg acgggcaagg gcggagatac
     2521 cgcttcgaca acctacgata tttgattccg ttgccgaaat gccgtccgaa ccgttcggac
     2581 ggcatttgtt ttgcaggaaa tagaaagatg ttccaatggc tttatgatgt attgtggctg
     2641 cttgcgccga tatggatacg gcgttatttg gacaaacgct ccggaagtgc cccggcatat
     2701 cgggcgcatc ggggcgagcg tttcggcaag ccgtatccga atcccgttac cggcgcggtt
     2761 tggatacacg ccgtttcggt cggggaaacg cgtgccgccc aacctttgat acgcgagttg
     2821 cggcagcgtt ttcccgatgc gccgctgctg atgacgcaga tgaccccgac gggacgggaa
     2881 accgcgcaag ttctgtttcc cgatgcgcaa tgccgctatc ttccgtatga caaaaaaacg
     2941 tgggtacggc agtttttgcg cgaacaccgc ccgatgttcg gcgtattgat ggaaacggaa
     3001 atctggccca acctaatgaa ggaatgccgg cgcgcgggtg tgccgctgtt tttggcgaat
     3061 gcgcggctgt cggaaaaatc gttgaacggt tatctgaaag tccgcagcct gatccgtcct
     3121 gctgtcgctt cgctgacggg ctgtctggta cagacggagg cggatgcggc gcggttggcg
     3181 aaattgggcg cggcatccgt gcaggtgtgc ggcaatacca aatacgacct gatgccgtcg
     3241 gaacagatga aaacgctggc ggggcagttt gaaaaacgca tcggagaccg gccggttgcc
     3301 gtgtgcggca gcacgcgcgt ttatcggggt gaagacgagg cggagaaact gctggcggcg
     3361 tggcaacaat atcgcggcga tgccctgctg gtcgtcgtgc cgcgccatcc cgagcatttt
     3421 cagacggcat ttgaaacggc aaaacgcttc gggtttaagg ttcagcggcg cagcgacggt
     3481 ttgccggtcg aacccgatac gcaggtgtgg ataggcgaca gtatgggcga gctgtatgcg
     3541 tattacctgt gcgccgatgt tgcttttgtc ggcggcagtc tggtcgattc gggctgtcag
     3601 aacatcatcg aaccgctttc ctgcggcgtt ccgacgatat tcggcttttc gacctacaat
     3661 ttttccgaag cctgccggca cgccttggca tcgggtgcgg cggttcaagt cgaatcggcg
     3721 gacgcgtggc gggaagccgt tgaaaaaacc ttatcgtacg aggggggcgg aatgcagatg
     3781 caggcgcgcg tggacggctt tatcgcacaa catcgcggag cgggcgcgag aatcgccgag
     3841 gcggtgcggg aagcggtatg cggacatcgg gggcgatagt gatacaatcc gcatccgagt
     3901 tttccggttg gagtaccgta tgagtattta cgcacttgca cacatcgtcc atctgtattg
     3961 cgccattgcc tttgtcggcg gcgtgttttt tgaagtgctg gttttgtccg tcctgcatac
     4021 gggacgggtg tcgtgcgagg cgcggcgcga agtggaaaag gcaatgtctt accgcgccgt
     4081 cagggtgatg ccgtttgtgg tcggactgct gttcgccagc ggcgtcgtga tggcggcaaa
     4141 ccgctacctt cctatattgg gcgaaccgtt tgccacttcc ttcggtacga tgctgacgct
     4201 gaaaatcctg ttggcgttca gcgtgttggc gcacttcgcc atcgccgtcg tcaaaatggc
     4261 gcgttccaca ctgacggtcg gctggtcgaa atacatacac gccgtcgtct ttacccatat
     4321 gctgctgatt gtctttttgg caaaagcgat gttttatatc agctggtaac acaactacat
     4381 ttcaaatcag gagattgaac catgacagaa tatcccggca tcgggtcgcc gttgttttac
     4441 ggcgtttttt ttgcggcagt gctggtcatg attgccttgg atatgttttc gctgaagaaa
     4501 aacggcagcc ataaagtcgg cgtcaaagaa gccttggcat ggagcggctt gtgggttgcc
     4561 gtatcctgcc tgttcgcggg ctggctgtat ttcgaactcg ccggcaatct cggctacggc
     4621 gcggcagtcg caaaagaaaa agtattggaa ttctttaccg gctacatttt ggaaaaatcg
     4681 ttggcagtcg acaatatttt cgtgttcctg atgatattcg gctacttcaa agtcgcacca
     4741 cagtttcagc accgcgtgct gctgtacggc gtattgggcg cattggtatt gcgcactgtc
     4801 atgattttcg tcggcgcggc actggttcgg cagttcgagt ggattctgta tctgttcggc
     4861 gcgttcctgc tctataccgg catacacatg atgaagcccg aaggcgatga ggaagaggat
     4921 ttggcaaaca gcaggctgct gaatgccgtc aagaaagtcg ttccggtcgg cacggaattt
     4981 cacggcgaga aattttttac cgtcgaaaac ggcaaaaaaa tcgccacgcc gctgtttttg
     5041 gtgctagtca tgattgaatt gagcgatgtc gtgtttgccg tggacagcat ccccgccgtc
     5101 tttgccgtta ccaccgatcc gtttatcgtg ctgacctcca atattttcgc cattttgggt
     5161 ttgcgggcga tgtatttcct gctggcggat gtggcggaac gctttatctt cctgaaatac
     5221 ggcttggcat tcgtgttggg ttttatcggt gtgaaaatgc tggtaatgca ttgggtgcat
     5281 atcccgattt ccgtttcact gtcggtcgtg ttcggcgcgt tgggtgcatc gatactgacc
     5341 tcgttaattt atacgaaaaa acagcctgat aaataaaatg ccgtctcaac gccgacaaaa
     5401 tggttgacag catcaggctt gatgtataga atttcgagct tgtcgggtcg ttagctcagt
     5461 cggtagagca gcggactttt aatccgttgg tcgagcgttc gaatcgctca cgacccacca
     5521 gataaaacaa aaaaagctga gttttcaaaa ctcggctttt tttgttttcc gacaatcctt
     5581 gttcggaaag cgcggcattt cgtcaaattc tttggtgcgg cttccgtatt tttcccgaaa
     5641 atcccttata attccgcctc tgcaaccttc atcgggtgat gctttatgcg ttgtcccgag
     5701 aattgaaata ttacaagtac ccaccaggaa agaacaaacg tggacaaact gaaaatctcc
     5761 gcaaacggcc cactcaacgg ggaaataacg gtctcgggcg cgaaaaacgc ggcattgccg
     5821 ctgatgtgcg cgggtttgct gacatcgggt acgttgcgcc tgaaaaacgt ccctatgctg
     5881 gcagatgtga aaaccacgca aaagctgctt caggggatgg gcgcgcgcgt cctgaccgac
     5941 aatatcagcg aatttgaaat taacggcggc acggtaaaca atacctgcgc cccttacgaa
     6001 ttggtacgga cgatgcgcgc ctcgattttg gtgctgggcc cgacgctggc gcgtttcggc
     6061 gaggcgcaag tcagcctgcc gggcggctgc gccatcggtt cgcgccccgt cgatcagcat
     6121 ttgaagggct tggaagcgat gggggcggaa atcgtcatcg aacacggtta cgtcaaggcc
     6181 aaaggcaaac tcaaaggtac gcgcgtggcg atggatgtcg ttaccgtcgg cggcacggaa
     6241 aacctgctga tggcggcgac tctggcggaa ggtacgacgg ttttggaaaa ctgcgccatc
     6301 gagcccgagg tggtcgattt ggcggaatgc ctggttaaaa tgggcgcgaa aatcagcggc
     6361 atcggaacat cgaccatgat cgtggaaggt gtggacgagc tgcacggctg cgaacacagc
     6421 gtcgtccccg accggatcga ggcggggacg ttcctgtgcg cggtggcgat aaccggtggc
     6481 agggtggttt tgcggaatgc cgcgccgaaa acgatggaag tggtgttgga caaactggtt
     6541 gaggcaggtg cggtgattga ggcgggcgac gattggatcg ccatcgatat gcggcagcgt
     6601 ccgaaggcgg tggacatccg cacggtcgtc caccccggct tccccacgga tatgcaggcg
     6661 cagtttatgg cattgaatgc cgtggcggag ggaagctgcc gcgtggtgga aacgattttt
     6721 gaaaaccgct ttatgcacgt ccccgagttg aaccggatgg gggcgaacat tacaaccgag
     6781 ggcaatacgg catttgtgca gggtgtggaa cggctttccg gcgcagtcgt caaggcgacg
     6841 gatttgcgtg cgtccgcaag cctcgttatc gccggtttgg cggcgcgcgg cgaaaccgtg
     6901 gtcgaacaga tttaccactt ggatcgcggt tatgaaaata ttgaaaaaaa actcggcagc
     6961 gtcggcgcga aaatcgagcg cgtatccggc tgatcgggtt gcgatgccgt ctgaagcctt
     7021 cagacggcat caattgtttc tgtatcgcaa acactgattg aaaaggactg attatggcat
     7081 ttttaaaact gaccgaacaa aacgtgcagg gcaaaaccgt cctcatccgc gccgatatga
     7141 acgtgccgtt caaagacggc aaaatcagcg acgacacccg tatccgcgcc tcgctcgcgt
     7201 ccatccaata ctgcatggac aacggcgcat ccgttatcgt gatgacccac ttgggccgcc
     7261 cgaccgaagg cgagttccac cccgaagacg acgttgcgcc cgttgccgcg catttgggcg
     7321 gcctgttggg caaaaacgtg aaagtattga acgactggcg cgaaaacaaa ccggctttga
     7381 acgcgggcga tgtcgtgatg ctgcaaaacg tgcgtatcaa caaaggcgag aagaaaaacg
     7441 atttggaact gggcaaagcc tacgcttctt tgtgcgacgt gttcgtcaat gacgcgttcg
     7501 gcaccgcgca ccgcgcccaa gcctcgaccg aagccgtcgc ccaagccgct cccgttgcct
     7561 gcgccggcgt attgatggcg ggcgaactcg acgctttggg caaagccttg aaacagcccg
     7621 cgcgcccgat ggttgccatc gttgccggca gcaaagtgtc caccaagctg accatcctcg
     7681 aatcgctggc ggacaaagtc gaccaactca tcgtcggcgg cggcattgcc aacaccttcc
     7741 tgttggcgga aggcaaagcc atcggcaaat ctttggcgga acacgatttg gtggaagaat
     7801 ccaaaaaaat tatggcaaaa atggcggcca aaggcggttc tgtgccgctg ccgaccgatg
     7861 tcgtcgttgc caaagccttt accgccgatg ccgaagcggt cgtgaaagac attgccgacg
     7921 ttgccgaaga cgatatgatt ttggacatcg gcccgaaatc cgccgccgag cttgccgatt
     7981 tgctcaaagc tgccggtacg gttgtatgga acggccctgt cggcgtgttt gagttcgatc
     8041 aattcgcagg cggcacgaaa gctcttgccg aagccattgc tcaaagcaaa gcattctcga
     8101 ttgcaggcgg tggcgacacg ctggcggcga ttgctaaatt cggcgttacc gaccaaatcg
     8161 gctatatttc taccggcgga ggcgcgtttc ttgagttctt ggaaggtaaa gagttgcctg
     8221 ccgtagccgc tttggaaaaa cgcggcgcgt aagcggtttg atataaaaaa tgccgtctga
     8281 aacgttgtgc tgtttctgac ggcatttttg tgtggcgatt attgtgcttt ggctgcccat
     8341 tccgccggag tggcggcaac cgaaatggaa agtgcgtgca gttcgttact ttccagttgg
     8401 gctttgagtc cgtctttaat caggcggtgg cgcgcgaggc gtgccttgcc ttcaaattct
     8461 gatgaaacga tgacggcgaa aaaatggtgt ccgtcgcctt ctacttcgat atgttcgcat
     8521 tttgccacgc cttcaatcat ggcttttact tgttccgagg tcagcatggt aggttccttg
     8581 ttggaaaaat gcgccattat actggcaaat tgaaatgccg tctgaaaacg ggttcggacg
     8641 gcatttttga cggtgtttta ttttttggct ttgaagccga gcaggtgctg ggtggtggca
     8701 agccacgcgc cgaatacgcc caacgcgatg acgaagccga acaccagcgc gatttcttca
     8761 ggataaaaga aacgccagcc gatattgagc ccgtagggtt tgaagatggc atcgaccaag
     8821 gggcgcactg tggaaagcag ccaaccgcaa agccccaggc tgacggcggc ggaaaggatg
     8881 ctctgccaca ttgcctgata aaggaagggg cggcggatga acgatgcggg cgcgcccaag
     8941 agtttggtga tttcgatttc ttctttgcgg ctgaggattt gcaggcggat ggtgttgtgt
     9001 gcgacaagga cgaacgccat acccagcgtc agggaaagaa accataaaat tttacggata
     9061 aattcgttga tttggtacag cgtttgcacc cattcggtat ccatagacgc ggattcgacc
     9121 ataggcagtt tggtaatgtc ccggtagatt gcctgcattt gcgcgggcgt tgtcgcgggg
     9181 tcgggggtaa cgataaatgc gtcgggcagc gggttgccgt cgagcatcga aaccaaattt
     9241 tggtcgaggt tggactgtaa ttccgccaag ccgtcttcct tgccgatgaa gcggacgttg
     9301 gcgatccgtt tgtcgcgcgc cagcaggctg cggacggtat cgctgtcgct ttgtgcggcg
     9361 gcggtttcca tatagacggt gatttgcggc gactcgttga gtttgcccaa cacgctttgc
     9421 ccgctttgaa tgcccaaata cataaacagc ggcagggtca tcgcgacggc gagcatcagg
     9481 agggtgagca gcgtgccgaa gggttggcgc agaagctctt tgagcgcggt gcgggcggat
     9541 tcgatgtgca gcgaggcgta gtggatgatg ctcatgcgag tcgtcctttc gagaggcgca
     9601 ggatgcggtg tccgtagtcc gccatcaggg tttcgtcatg ggcggcaacg atgacggttg
     9661 ttcccgcttc gtggaaggtt ttgaacaatt ccatgatgtc gagcgcgtag gcgcggtcga
     9721 ggttggcgga gggttcgtcg gcaatcagca ggccgggctg gtgaacgacg gcgcgggcga
     9781 tgcacaggcg ttgttgttca ccgccggaga gggttacggg atcgtccaat tctcgtcctt
     9841 tcaggccgac tttttcgatg gcgatgcggg cgcgttcttc ggctttgcgc ggcggatagc
     9901 cgataatccg aagcggcagg atgacgtttt gcaggacgtt gcggtcgtag aggattttgt
     9961 ggtcttggaa cacgatgccg atgtgttggc gcataaagcc gatttggttg tcggtcagtg
    10021 tgccgaggtc ttggttgttg aagtggactt tgcccctgct tggtttggta atgcccgaaa
    10081 tcagcttgag gacggtggat ttgcctgaac cggagtgtcc tgcgataaaa atcatctcgc
    10141 ctttgttgat ttggaagctg acgtttttca gggcttcaaa accgccggga taggttttgg
    10201 aaacttgttc gaaacggatc ataggaggtc ctgtaaggaa gggcggcata tcgtttcggg
    10261 cggttgcgtc cgcagggata tgccgtctga acaataggta agacagtgcc gattataaag
    10321 attccgcctg cttttagata gtggataagt ttggcggata tgaaggtcgg gcgggaaaaa
    10381 tgccgtctga agcggcttca gacggcatcc ggcgtttaac ggcattttga atgggcgagt
    10441 ttgacggctt cggtcaggct tttttcgttc acttccccgg taatggtctg cctgtatccg
    10501 catttcggtg cttcgacgac ggtaaagggc agtacgccga cagtgtttcc gtaggttttc
    10561 ataaagtttc ggctgttcgc cccggtgtaa cgccaaatcg ggtaggaaac aggagtttgt
    10621 ttgaggaagt tgccgatatt gtcggatgtg tcgagcgcga tgccgaccat atcgacgctg
    10681 ccttttttct gcgctttgta ccatttggac atggcgggca tctcttttcg gcacgggccg
    10741 caccaagtcg cccacaggtt gacgatgcgt acgggggctt tgagcgattg caggctttgc
    10801 gcggtaccgt ctttccatcc ggcaagttcg tctgccgagg cggtatgtgc ggcaaatgtg
    10861 gcggcaaggg cgattgcggc aagattcaag tatttcatcg ttttgtcctt tgtatgttga
    10921 ttcgggtatt gtaaaccgtt tggtacggtt gggggcggga tattgagtaa aaccctgcgt
    10981 aagccgataa taaggggatt gttgagaagc aaggaaatgt catgcctgaa atcaaaattt
    11041 tccacaatcc gcgttgcagc aaatcgcgtg ccgccttgtc cctattggaa gaacgcggca
    11101 ttgctgccga agtggtcaaa tatttggata cgccgcccga cttgtccgaa ttgaaggata
    11161 ttttcaacaa attgggcttg gcatcggcgc gcgggatgat gcgtgtgaaa gatgatttgt
    11221 acaaggaatt gggtttggac aaccccgatt tggacaatga cgcgctgctg cgtgccatcg
    11281 ccgagcatcc cgccctgttg gagcgtccga ttgttttggc gaacggtaag gcggctgtcg
    11341 gcaggcctct ggaaaatatc gaagcgatat tgtgaacaaa cggctgtttt gcagccgcaa
    11401 cggcttgcgc tattacctgt tgggcggttt ctgtttgagt gtttttccgc ttttgctggt
    11461 gtttgcctca tccgtttggg cggtttatcg gacgggcggg caggttttgc cgccgtatgt
    11521 ccgggcggat gccgcgctgg tgttgggcgc cgccgcgtgg gacaaacgcc cttccccggt
    11581 tttccgcgaa cgcatcaacc acgccatcgc gctttatcag agccgcaggg taggcaaaat
    11641 cgtgtttacg ggagggcgaa ccaaaaaagg ctatatgacc gaagccgagg tcgggcggcg
    11701 gtacgcgctc aaacaggggg ttccggcgcg caacatcctg tttgaaaaca cttcgcgcaa
    11761 cacttatgaa aacctgaaca acatccgtcc ggttttgcgt gccaacggta ttgacagcgt
    11821 ggtgattgtc agcgatccct accatttggc gcgggcggcg gaaatggcgg aggatttggg
    11881 tgtccgcgtt tatatgtctg ccaccccgac cacgcggttt gatgcgggaa ataagaaaaa
    11941 aatctttatg ctgcaagagg gatatgcgtt atccctctac cgtttggaaa aatggggcag
    12001 ccgctttttg ggatggctgt ctgattgaag cggtagaaaa tgccgtctga aacttatccg
    12061 caggcagggt tcggacggca tttttgatgc ccaagcacgg taaaaccagt aaaataaacg
    12121 ctttcaaaga tttcggagcc atcatgaccg tcaaaacccg tttcgccccc agccccaccg
    12181 gctacctgca cattggcggc gttcgcaccg ccttgttttc gtgggcgttt gcccgccatc
    12241 ataaaggcga atttttattg cgcatcgaag acaccgactt ggcgcgttct accgccgaat
    12301 ccgtcaacat catcctcgac ggcatgaaat gggtcggcct gaactacgac aacgccgaca
    12361 atgtcgtgta ccaaacccgc cgtttcgacc gctacaaaga agtcattgcc gaacttttag
    12421 aaaaaggcca tgcctactac tgctattgca gcaaagaaga gctggaagcc atgcgcgaga
    12481 aagccgaaaa agaaggcacg gcgacttacg accgccgctg gcggccggaa gcgggcaaaa
    12541 ccctgcccga aatccctgcc ggcgtgcaac ccgtcgtccg cttcaaaacg cctttggatg
    12601 gcgtaaccaa gtgggcggac ttggtcaaag gcgaaatttc catccccaac gaagccctcg
    12661 acgacctgat tatcgcacgc gccgacggca caccgaccta caacttctgc gtcgtggtgg
    12721 acgactacga catgggcgtt acccacgtta tccggggcga cgaccatgtg aacaacaccc
    12781 cgaaacaaat caacatctta aaagccatcg gcgcaaacct gcccgaatac ggacacctgc
    12841 ccatgattct caacgaacaa ggcaaaaaaa tctccaaacg cagcggcgat accgtcgcca
    12901 ttaccgattt cggcgcaatg ggcatcctgc ccgaagccat gctcaactat ctggcgcgct
    12961 tgggctgggc gcacggcgac gacgagttct ttacgatgga acaattcatc gaatggtttg
    13021 atttgaaaga cgtttccccg tctccaagcc gtatggactt gaaaaaactc tactggatca
    13081 acggcgaaca catcaaaatc accaccaacg aaaaactggc cgaaatggtg aaaccgcgcc
    13141 tcgccctgcg cgatatccat gaaacaagca agcctgcttt ggaagacgtg ttggcattgg
    13201 tcaaagaccg cgcccaagat ttgaacgcct tggcagacga atgcctgtat ttctacaaaa
    13261 aacaagtccc tgccgaagcc gatgttgcca aacactggga cgacgaagcc tccgcccgta
    13321 tgctgcgctt tgccgaacgc ctcgagggtt tggaagactg gaataccgaa gccatccacg
    13381 acctgttcaa acctttctgt gacgaagaag gtattaaaat gggcaaactc ggcatgcctt
    13441 tgcgcctcgc tgtctgcggc acggcgaaga ccccaagcgt cgatgccgtg ttggcattaa
    13501 tcggcaaaga agaagtgttg aaacgcatcc gcgcttaagt tatccacagg cgtgggtgat
    13561 gccgtctgat gttggaatac ggcttcagac ggcatttaaa cggaagttaa aaatgaaaaa
    13621 aatattttat tttctgatgg ttgttttttc tacaagcgta tgggccgggg atgcggaaga
    13681 caatctgctc agcatccaat ccggttatcg tgccttactg caaaaacaaa acaatctgga
    13741 cggaaaaatc atcgggatgc agtcggattt ggaagatgcg cgcagacggt tgcaggcggc
    13801 tcaggcagac atcgcccgtt tggaagcgga aattcctgca gcaatggcgc aaaaagcccg
    13861 gcaggctgaa gagctgaggc aaatcggagt gcgtttggac catgcttgga atgcggttta
    13921 cggcgcaggg ggaacgaaag cgtcggggaa ttgaccgatg aattccctct ttgtggacaa
    13981 tactgttttc attacacggc tgaaagccgg gcatatcggc aggttggttc aggcgttgtt
    14041 tgaggagtgg cacggatttg aaccgtggtc ttctgtggat aagattcatg cctattacgg
    14101 caggtgtttg aaggatgacg aactgccgct ggcatttgcg gctgtggatg attccggaat
    14161 cctgttgggt tcggctacgg tcaagcggca tgatatggaa agttttccac agtatgaata
    14221 ttggttgggt gatgtctttg ttttacctga atatcgcgga aaaggcattg gcaggaggct
    14281 ggtcgcccat tgcataggcg cagcgcgttc gctggggata aagttcttgt atctttatac
    14341 gcctgatgtg caaatatttt atgaatcatt cggctgggcg gttgtcgggc gacatttcca
    14401 taacggtgaa tgggttacgg ttatgcgttt ggatatggat aaggtttaag ccgaatggac
    14461 aaatgccgtc tgagctgttc ggacggcatt tttatgtttg gaaacttctt gtcagataat
    14521 gtttatccac agatttttcc atatggtttg atgctgttcc gccaacggaa attaagatac
    14581 ggatttgcac aaatctttca gacggtacag ttctgacaat gcttcgcgcg gggtcaggct
    14641 gtcgggatcg agtttttcca aggctgctgc caatatacct tcaaaatgtt tttcctctgc
    14701 tttgtccaca aagttgccca cattcggttc atctcctttt tcagacggca tggtactgaa
    14761 aatatccagt tggggacggt ttgcggcggc ttggttttcc agtccgttca aatgcttttg
    14821 ggcggatttc aatgcgcgta caggcaggcc ggcgagtttg gcaacggcga tgccgtagct
    14881 tttgccggcg ggacccggtt ggatttggtg caggaaaacg atgtcctgtc cctgttcgag
    14941 cgcggaaagg tgcatattga cggcggcggc gtgggcttcg ggcaggtagg tcagctcgaa
    15001 atagtgggta gcaaacaggc tgaaggattt gtttttttgc agcaggtgtt cggcaacggc
    15061 gtgcgcgagg gcgaggccgt cgaaagtgga agtaccacgt ccgacttcgt ccattaaaac
    15121 aaggctttgt tcggtggcgt gatgcaggat gtaggcggtt tcgctcattt cgaccatgaa
    15181 agtggagcgg ttggaggcga ggtcgtccga tgcgccgatg cgggtgaaga tttgatcgat
    15241 gggcccgatt gtggcggcat cggcaggcac aaaacagccg gtgtgtgcca ataaaacaat
    15301 cagcgcgact tggcgcatgt aggtggattt gccgcccata ttggggccgg tgagcagcat
    15361 gaggcggtgt ttgtggtcaa ggtcggtgtg gttggcggtg aagtggcgta cctgctgttc
    15421 gacaacggga tggcggccgt tttcgatgtg gataaccgga tagtcggcaa actcggggcg
    15481 gacgaagttc cgctcttttg ccaaggctga aaatgtggac aacacgtcca gcgcggcggc
    15541 ggctttggcg gctttttgaa gctgcggcaa tgccgtctga aggtttttca atacgccgtc
    15601 aaagagttgt ttttctaagg cgagggcttg ctcttgagca gtcagcactt tgtcttcaaa
    15661 ggctttcaac tccggcgtga tgaagcgttc ggcgtttttg agggtttgcc ggcgttggta
    15721 gtcggcaggt gcttgttcgg cttgggtttt ggacaattca atgtaaaagc cgtgaacgcg
    15781 gttgaactcg actttgagtg tggacaaacc ggtacgttcg cgttccttgg cttccaaatc
    15841 cagcaaaaat tcgtcgccat ggttttgaat gcggcgcaat tcgtccagtt cgggatgaaa
    15901 accgtggttg atgacattgc cgtctttcag ccagacggaa ggttcgggca aaatggcttg
    15961 gcggagctgt tcggctgtgg ataggttttc agggaaaacg gctttgaggg tttccaacag
    16021 gctgctgccg tttgcggaca agtcgatttg tgccaactcg aacagactgt cgcgtaaaga
    16081 tgccaaatcg cgcgggcggg cgttgccgac ggcgatgcgg gcagcaatgc gttcaatgtc
    16141 cgcaatgttt ttcagacggc attggagggg tttgtattgg ctttccagcg cggcaacggc
    16201 ttcttggcgc gctcggatgt gggcgcggtt gcgtaaaggg tggtgcagcc agagagccaa
    16261 gaggcggctg cccatatggg tagcgcaaag gtcgagcgtg gacatcaggg tcggcgattt
    16321 tttgccggag agggtttgcg tgatttcgag attgcggcgc gtggcggcat ccataccgat
    16381 atattggctg tcggtttcga gcgacaggcc gtccaaatgt tgcggcatca ggttttgcgt
    16441 cagacggata tagttcaaca gtgcacctgc cgcgccaatc gcaacggcgt gttctttgcc
    16501 gtccaaaccg aagccgcgca aatcctggca gccgaaatat tccgtcagca gtttttcccc
    16561 cgcgtcggcg gcaaactgcc acgcgttcag gcgcgtaaca cccgatgccg tctgaagttg
    16621 cggtgcgttt ttactgtcag gcaacagaat ttccgccgcc tgcaggcgcg ccagttcgtc
    16681 gtccaattta tccacagttg tcagcttggt tttgaattcg ccgctttgca gcgatgccca
    16741 cgccaaaccg atgtattttt tgtcggggga cacggcaacg atgcggttgg tttccttgtc
    16801 ttccagcaat gcggaatcgg tcagcgtgcc gggcgttacg atgcgcacga ctttgcgctc
    16861 caccggtcct ttgcctgcgc cgacttcgcc gacctgttcg caaatcgcca cgcttttgcc
    16921 caacttgacc aggcgcgcca gatattgttc ggcggcgtga aacggcacgc ctgccatttt
    16981 gaccggctcg ccatccacct gtccgcgcgt ggtcagggta atatccaaaa gttttgccgc
    17041 ttctaccgca tcgtcgaaaa acatctcgta aaaatcgccc atacggtaaa acaccagttt
    17101 gtcggtatgt tgcgctttga tgccgaggta ttgctgcatc attggggaaa cggcggattt
    17161 ggacatgggg ctgccttatc attaggaaaa cggtattgta gcaaaaggtt ttgtcttcga
    17221 cggaatgaga ctgaccgtaa gcctgtcaat aaggttgtgg agacaactag gaaaacagca
    17281 aagttatcca cagaaatatt attaagtcaa aaaacatcca cgcttatctg tcttatacag
    17341 caagtcttaa actcaaactt atttgacaaa aaggtaatga aaatattgga tatttgctac
    17401 ttacgcacaa gcaggttggc aatcatcaaa atcatcatta aaattttaaa ttcaaatatt
    17461 gatggtaaaa gttttggaaa tctgtgcaaa cagtaaaatt catctatatc aaataagcat
    17521 caagtagtta gatgtaatag tggaatgtaa ctttatttca gaatacaata caggtattga
    17581 aatttcgttt cacagcttgg agtatataca tgagcattaa agtagcgatt aacggtttcg
    17641 gccgcatcgg ccgcctcgca ttgcgtcaaa ttgaaaaagc ccacgacatc gaagtcgtcg
    17701 ccgtcaacga cctgacccct gccgaaatgc tgctgcacct tttcaaatac gacagcacgc
    17761 aaggccgttt ccaaggtact gccgaattaa aagacgatgc catcgtggta aacggcaaag
    17821 aaatcaaagt tttcgccaat ccgaatcccg aagaattgcc ttggggcgag ttgggtgtgg
    17881 atgtcgtcct cgaatgtacc ggcttcttta ccaataaaac caaagccgaa gcccacatcc
    17941 gtgccggcgc gcgcaaagtc gtgatttccg cacctagcgg caatgatgtg aaaaccgtcg
    18001 tatatggcgt aaaccaagac attttggacg gcagcgaaac cgttatctcc gctgcttcct
    18061 gcaccaccaa ctgccttgcc ccgatggcgg cagtcctgca aaaggaattc ggcgtagtcg
    18121 aaggcctgat gaccaccatc cacgcctaca ccggcgacca aaacaccctt gacgcgccgc
    18181 accgcaaagg cgatttgcgc cgcgcccgcg ccgccgcgct caacatcgtg cccaacagca
    18241 ccggtgccgc caaggccatc ggtctggtta tccctgaatt gaacggcaaa ctcgacggct
    18301 ccgcccaacg cgtccctgtt gccaccggct cgctgaccga attggtttcc gtcctcgaac
    18361 gccctgtaac caaagaagaa atcaacgccg cgatgaaagc cgccgccagc gaatcttacg
    18421 gctacaacga agatcaaatt gtttcttccg acgttgtcgg catcgaatac ggttcgctct
    18481 tcgatgcgac ccaaacccgc gtgatgaccg tgggcggcaa acaattggtg aaaactgttg
    18541 cctggtacga caacgaaatg tcctacacct gccaactcgt ccgcactttg gaatacttcg
    18601 caggcaaaat ctaaggcttg aacaaacctg tggataagta aatgccgtct gaacacattg
    18661 cgttcagacg gcattgttta tctgtatagt ggattaaatt taaaccagta cggcgttacc
    18721 ttgccttgcc gtactatttg tactgtctgc ggcttcgttg ccttgtcctg atttaaattc
    18781 aatccgctat aacttgatat tgcggcttat ggcgaacaaa caacagccgt ttgttcaact
    18841 gctatgcggc aaaaccggat ttttgcccga tttaaagcgg ggttggggaa agatcaataa
    18901 cggttgcacg gttttcctcg atttgaaatc tgatttcgta atccgcaata ttcatcacat
    18961 aaatccgttc gggaatattc tgataggcgg ggcgcggatc ttgggcaatg ctttggctga
    19021 taaggttttt ggtgtttgca gataaatttt ccgcgccgat gttttcctgc caaacgactt
    19081 ccaactctac gggtttgccg ctgacgaaac cagatgcggc atcgggtttg gattcgacaa
    19141 aggggatata aggcttgatg tccacaatcg gcgtgccgtc gagcaggtct gcgccgctgc
    19201 aataaaggcg gacgggtttg ccggtttcga tgcggttgag ttttaagagt gatagtccga
    19261 gatggttggg gcggtggggg ctgcgcgtgg cgaatacgcc cattttttgt ttgccgccga
    19321 gccgtggtgg gcgcaccatt tgtgcccagc cttcatccaa tacgccgtga aaaataaaac
    19381 ttatccacac ataatcgaaa tcttccagcc cgcgcacgct gtctgcggta aattcgggat
    19441 tcagctcgat gcatacttct gcggcggaga ctaaaccggg ctggcgggcg atgccgaatt
    19501 tctgtttgta gggcgatcgg gcggtgccga tgggggtaat ggtataagtc ataaggttgt
    19561 ggataagttt ttttggaaaa accttatctt atcacaatcg gttttaccgt ttttgggcag
    19621 taatttgtta taatacaggg cattttaatc gcgttgaaat aatgagatga ttgtttccat
    19681 tgatgttgat gcacaaaaaa cgtttacgcc actgtgtcct gacgaactgc ccgtgaacga
    19741 ggggcatttg attgtcgagg agttgaatgc tcaagccgct ttggcggatt tgcgcgtgat
    19801 gacgaaagat gcgcatcata tggtagcgaa atggcttgtg gataaccctg ttgatatgtt
    19861 gaagccgaca ggtttgcctg atgcggattt gacttgggtg gctcatgcga tggtcggtac
    19921 gcgcggctat gaattattgg acggactgcc ttctgctaaa gaatatgatt attgcgtttg
    19981 gaaaggtgtt gatcctgaat tgcatcctta cggcgcgtgt tttcacgata ttgaggaaaa
    20041 actaagcaca gggctgattg aatggctgcg ttgtcaaaat acggatacgg ttattatcgg
    20101 tgggttagct acggattatt gtgttaaaac aacggttttg cagttactta aaggtggtaa
    20161 ttggcaggtt atcgtcaatg aagcggcttg tcggggcatt gcgccggata ccattgaaac
    20221 ggcatggcag gaaatgagtt ctgccggtgc agtcatctta aaaaacgctg aagaaattaa
    20281 aaaatatatt aataatcaat aagttaaaat tgtttcacgt gaaacatact tcttaaaata
    20341 tgaaaatttt gcttgtccgt ttgtctagta tgggcgattt aattcacact ttgcccgcaa
    20401 ttgaggattt ggcgcgacaa tgccctgatg tagaactcca ttggctgtgt gaagctggat
    20461 ttacagatat tgcgcgcctg catccgtttg tgaaaaaaat ccatgtgatg aaatggcggc
    20521 aatggcgcaa acatctcttt caggctgaaa cttggcggga aatgggtcat ctgaaacaga
    20581 ctttgcggca ggaagcattt aattttgtat tggacagtca aggtctgatt aaaagcgcgt
    20641 gtttcgctaa aatggcgaaa tcccctattt atggtttgga taaaaatagc gcgcgcgagg
    20701 gactggctgc gctggcgtat gcgaaaacat acgctgtacc gaaagggaaa aatgctgttt
    20761 ggcgcaatcg tgagctgttc gcccaagtat ttgggtatgc gatgcctgaa acgcaggtat
    20821 ttggcttgac tgttcctgag gtaggccgtc tgaaaaattt agcgcagccg tattatgcgg
    20881 ctttgcatgc gaccagtcgg gacagtaagt tatggcctat ggaaaactgg cggtcgttgc
    20941 tgcaaaagtt gaatgaagaa cagcaatgca atatttacct gccttgggga aatgaagatg
    21001 aaaaaacgcg tgccaaacag attgcagacg gactgccgtt tgctattgtg tgcgacaaaa
    21061 taaatttatt gcaggcagcg tatctgctga aatacgcggt cggaattgtc ggcgtggata
    21121 ccggtttgct gcatttggca aatgccttgg aaaaacctgt ggtcggcatt tataccgata
    21181 ccgatccgat taaaacaggc gttcaggttt cgccaattgc aaaaaatttg ggcaatatcg
    21241 ggcagattcc gaccgcagat ttggtttatc aaacgttgat ggattgtgtt gcagcagaca
    21301 aaggctaaag ggttgtctga aactgatata gcacctgata tttttcagtt tgttaagcat
    21361 aagaatgtat atctaccagc ctgagtaaat gctttaaaaa tggtataatc ggcaagcatt
    21421 atccgaaaga tttttgaatg aattcgtttt taaggaaaac ggatttggtt ttatagggaa
    21481 gaaggtttgg tttcgctgga tggtgaaagc agcgttcttt ttaggagggt tcaatgaaag
    21541 cactggtcgc agtaaagcgc gtagtggact acaacgtcaa agttcgtgta aaagccgatg
    21601 gttcggatgt ggatatcggc aatgtcaaaa tgtcgatgaa tccgtttgac gaaatcgctg
    21661 tggaagaagc tgtccgtttg aaagaagccg gaaaagtaag cgaaatcgta gcggtttctt
    21721 tgggtgagaa aaaatgcgaa gaaaccttgc gtacagcttt ggcgatgggt gccgaccgtg
    21781 ccattcatgt tgaaaccgat actaaactgg agtctctggc cgttgctaag ttgctgaaag
    21841 ccgttgcgga caaagaaaat ccgcaaattt tctttttggg caaacaagcg attgatgatg
    21901 atgccaatca agtggcgcaa atgctggcag ctttgctgaa tgcggcgcaa ggtacgtttg
    21961 cttcaaaagt acacattgaa tgtggtgaag tacagattgt gcgcgaaatt gatggcggcg
    22021 aagaaaccat agcattaaaa ctgcctgctg ttatcagtgc tgatttgcgt ttgaacgagc
    22081 cgcgctttgt caaactcccc aatattatgg cggcaaagaa aaaacctttg gaaaaactga
    22141 ctcctgacga tttggttgcc gacatttcac ctcgtttgaa aacggtgaaa tttgccgaac
    22201 ctaaggcgcg tcaggcaggc gtaaaagtag caagcgttgc cgaattggtt gaaaaattga
    22261 aaaacgaagc caaagtgatt tgaggaggct gaaatgagtg tattgattat tgtcgaacac
    22321 gacaacaaac agttgaatcc taccactttg catgctgtta ccgctgccgc taagctgggt
    22381 aaaatcgatt tattggttgc cggaagcggt gcatctgctg tggtagagtt cgcaaaacaa
    22441 gtggcgggtg tggaaaaagt tttggttgca gatgctgccc attatgccga aggtttggct
    22501 gaagagttgg ctccgctggt tgttaaattg gcagtggatt actgctatgt tgcagcaacg
    22561 gcaactacat tcggtaaaaa ccttttgcct cgcgtagcag ccttattaga cgtaccgcaa
    22621 atttctgatt tgaccgaaat tgtggataac acgacttttg tgcgccccat ttatgcgggt
    22681 aatgcatttg aaaccgtgca agctgattca gaaaaattgg tgctgacctt ccgtgcgacg
    22741 gtttttgacg cagtggcggc gcaaggtggt aatgctgagg taattaatgt tgaagcaacc
    22801 cctgcccaaa acctgagtcg ttttgttaac cgtcagcttt cccattccga tcgtcctgaa
    22861 ctgactcagg caaaagtgat tgtttccggt ggtcgtgcgt tgggtagtgc ggaaaaattc
    22921 aatgaagtgc tgacaccgtt ggcggatgtt ttaggtgcgg caatcggtgc atcccgtgca
    22981 gcagttgatg ccgaatatgc gccaaacgat gctcaagtcg gacaaaccgg taaagtggtt
    23041 gcgccgcaac tctattttgc aatcggtatt tcaggtgcaa ttcaacacgt tgccggtatg
    23101 caagacagta aggtgattgt tgcaatcaat aaagatgctg atgcgccgat tttcaatgta
    23161 gccgattacg gattggttgg cgatttattt gaaatcgttc cacaattaac agaagtattg
    23221 aaaaattgat gtttcacgtg aaactttcag acgaccttgt tattaatgag gtcgtctgaa
    23281 aacatttcag catgattacg acttataaaa ccattacttc ctcgacgcag gctgagttta
    23341 aagataaagg cagccgtttt attgcattta cctatccgat tcggacattg gctgatgtga
    23401 aaaaatacct cgatctgtta aaggaagagc atcataaagc acgacactgg tgctatgcct
    23461 atcgtttggg tgtggatggt gtgcaatttc gtgccaacga tgatggagag ccatcaggaa
    23521 gtgctggacg accaattttg ggacagattg attcggtggg tattaccgac gttttggttg
    23581 tggtcgtccg ctatttcggt ggtactttgt taggtgttcc aggtctgata catgcgtaca
    23641 aagaggcgac ggctcaagcg ttggcagttg cagaagtagt tgaaaagaat attgaaaaaa
    23701 ctgtttggct gaaatgtgaa tatccgtttt tgaatgaagc gatacgcatt gccaaacaat
    23761 atcaggcgga tatattggag cgggatttgc agttggattg ccgattgacg gtcagtttgt
    23821 cgttggtaaa ttatgaggcc tgtgttgcgg cttggaagaa tactcggcag attgaagtaa
    23881 atacggaaaa gccttttgaa tgaaaggtcg tctgaaatgc tttgtgatgg tatttcagac
    23941 gacctcttcg ctgactaatc ttcttgtgta tatttgtcta aggcatcgac gctggagcgc
    24001 aaatataacc aagccaattg atggaattcg cccagcgcgt tccatagcgc atcttcactc
    24061 ataatgctgt attcgccttc cgtactcaaa tccagttcta ccccgtcttc aatagcctga
    24121 tgacacgcct gatactcgtg ggtatagaaa ttgtccatgt cgcgaattaa agtgacgaca
    24181 tatttccaac ggcggatgtc ttcttccagt tgcggtagta aatgacacca ttcgcggtat
    24241 ttgctttgga tttcatcaat acgtttttgc atggttgctt gtcctttttt aatttatgga
    24301 taagttgaat aggttgcaga gtggaatgaa gcggtctttt gtttgattct actaaaattt
    24361 cttcagatgg gataaaagtc cctttgtatc gagttttcgt taaaagtaca tatttgtcaa
    24421 ggagatggta tgaaactgct ggttatcggt aatggcggtc gcgaacacgc gctggcttgg
    24481 aaattggcgc agtcgcctaa agtggaaaca gtatttgttg cgcctggtaa tgccggtaca
    24541 gcgattgaac ccaagttgca aaacatcgac ttgactgcgc atcaggattt gattgaattc
    24601 tgtcgtaaag aaaatattgt ttttaccgtc gtcggccctg aagcgccttt ggcggcaggt
    24661 attgtggatg atttccgtgc tgcaggacta aaaatattcg gtccgacaca atatgcggcg
    24721 cagttggaaa gttccaaaga tttcgccaaa gcatttatgg cgaaatacaa tattccgacc
    24781 gcgcaatatc aaacctttga aaacgccgat gccgcacatg attacgtcaa tcagaaaggt
    24841 gcgcctatcg ttatcaaagc cgatggtttg gcggcaggta aaggcgtgat tgtggcgatg
    24901 actttggatg aagcgcatgc tgcgattgat gatatgctgc tggacaacaa aatgggcaat
    24961 gccggcgcgc gtgttgtaat tgaagatttc ctgcaaggcg aagaagcgag ttttatcgtc
    25021 atggttgatg gcaataatgt actgcctatg gcaaccagcc aagaccacaa gcgtctttta
    25081 gacggcgaca aaggtctgaa tacgggcggt atgggtgcgt acagccctgc gcctgtggta
    25141 acgcctgttg tgtacgaacg cgcgatgaat gaaattattt tgccgaccgt agcagggatg
    25201 aaagcggagg ggcatgagtt caccggtttc ctgtacgcag gtttgatgat tgatcaaagc
    25261 ggtgcaccct atacgattga gtttaactgc cgtttcggcg atcctgaaac ccagccgatt
    25321 atgagccgac tgaacagcga cttatcggat ttggttgaag cggcaataga cggcaaactc
    25381 gatagcgtaa ccgcggaatg gagcccgcaa actgccgtgg gcgtggtact ggcggcgcaa
    25441 aattaccccg aaacgcccaa aaaaggcgat attatttccg gtctggatgc tgccaaccaa
    25501 atcggcaaag ttttccatgc aggtacaacg gcaaaagaga aaggtgacgt attgaccaac
    25561 ggcggacgcg tattgtgtgt tgtgggattg ggcgacaatg tggcgcaagc gaaagctaag
    25621 gcatatggcg cgttggaaaa aatcagtttc gacgggatgc aataccgtaa agacattgcc
    25681 gataaagcga ttaaccgtta actagaaaga ggatgatgcc gtctgaagcc aagtatgact
    25741 gatgtgcttc agacggtatt ttatattatg ttatttccga gaattatcgc agcatcagcg
    25801 caacgtaagt taagcgttta tttgaaaaaa ggcggtttgg tcgcttatcc gaccgaatct
    25861 tgttatggct tggggtgtct tccgacatta gccaaagcac tcggtaagtt ggcgcatttg
    25921 aaaaaaagac cgcaacacaa gggtatgatt gtcatcggga atcaatttga gcaattgcag
    25981 cctttacttc aaatgccgtc tgaaaatctg caggatatgc ttagaaaaga atggcccgcc
    26041 cctaaaacgt tcctattatc cgccaaatcc tgtgtcttac ctgagttgcg cgggaaacag
    26101 cgcagcaagt tggcggtcag ggttcccgcc catgtaggtg cgcgccgctt gtgtcaggct
    26161 ttgcaaacgc ctttggtctc gacttcgtgc aaccgcgcag gcaaacgcgc gtgtcggacg
    26221 gagagggaag tcagaaggca attcggacgc gatgtgtgga ttgttggtgg gagaatcggc
    26281 aggcagaaat cgccgagtca gattattgac ggggaaacag gtaaacgttt gcgttagata
    26341 tgggtatttg aatgaaaact ttttttgcat acacaaagaa aaaattttgg ggctgtacta
    26401 gattagccct aaatcccaca ccaatcccgc aggattttaa gctgttgaga cggtgtgccg
    26461 aagttaaatc gaaattcgca ttctttcaag aacagcggga aagatttgcg atcgattcca
    26521 ttgtattttc gcaagacgcg ttttgcctga ttccaaaagt tctcaatgcc gttaatgtgg
    26581 ttttgacggt ctgcaaactc cttggaatgg ttaatgcggt aatggataaa accgctcacg
    26641 tccaacttgt cgcagctgct cagactattg gtataaacaa tgctgtccgg catgattttc
    26701 tttttgatga cagggagtaa cgtttcagac ttggcattat ccaccacaac ggtatagacc
    26761 cgt
//
LOCUS       DAXHKG010000009        26525 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.009, whole genome shotgun sequence.
ACCESSION   DAXHKG010000009 DAXHKG010000000
VERSION     DAXHKG010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26525
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.009"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            124..2151
                     /gene="uvrB"
                     /locus_tag="ACFMWP_000311"
     CDS             124..2151
                     /gene="uvrB"
                     /locus_tag="ACFMWP_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HFC5890975.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDGGKGRRQGKNKVKV
                     SEIHNEEDAVKEIAKLEKAMQQAARDLQFEEAAVLRDRIRGIKEGLLFGSE"
     gene            2263..2550
                     /locus_tag="ACFMWP_000312"
     CDS             2263..2550
                     /locus_tag="ACFMWP_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5890976.1"
                     /translation="MTYSFRVENINDISDIPENHLEIVRAALPSNRSNALSREPDGAQ
                     AVFVYEIDGEFRAKLFDRIKDTDSYLQATEDNYSNDPRSIGVVYVLEQQQG"
     gene            complement(2731..3447)
                     /gene="trmB"
                     /locus_tag="ACFMWP_000313"
     CDS             complement(2731..3447)
                     /gene="trmB"
                     /locus_tag="ACFMWP_000313"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HFC5890977.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVIENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYARQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRMG"
     gene            complement(3569..4973)
                     /locus_tag="ACFMWP_000314"
                     /pseudo
     CDS             complement(3569..4973)
                     /locus_tag="ACFMWP_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            complement(5090..6976)
                     /gene="uvrC"
                     /locus_tag="ACFMWP_000315"
     CDS             complement(5090..6976)
                     /gene="uvrC"
                     /locus_tag="ACFMWP_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HFC5890978.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPDPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPHSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(7031..9193)
                     /locus_tag="ACFMWP_000316"
     CDS             complement(7031..9193)
                     /locus_tag="ACFMWP_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC5890979.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQAEAEHHIGWRLWLLSAINIPFLVG
                     MAGMMIGRHDWMIPPLWQFALASIVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRDGEWKQLPIDQVQIGDLIRANHGERIAADGVIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDKDDLYRI
                     AAAVEQNAAHPLARAIVSATQARGLEIPAAQNAQTVVGAGIAAEVEGAGLVKAGKAEF
                     AELTLPEFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAQQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            9332..10282
                     /gene="trxB"
                     /locus_tag="ACFMWP_000317"
     CDS             9332..10282
                     /gene="trxB"
                     /locus_tag="ACFMWP_000317"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HFC5890980.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            10437..10805
                     /gene="rpsF"
                     /locus_tag="ACFMWP_000318"
     CDS             10437..10805
                     /gene="rpsF"
                     /locus_tag="ACFMWP_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HFC5890981.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            10806..11108
                     /gene="priB"
                     /locus_tag="ACFMWP_000319"
     CDS             10806..11108
                     /gene="priB"
                     /locus_tag="ACFMWP_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HFC5890982.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            11115..11345
                     /gene="rpsR"
                     /locus_tag="ACFMWP_000320"
     CDS             11115..11345
                     /gene="rpsR"
                     /locus_tag="ACFMWP_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HFC5890983.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            11362..11814
                     /gene="rplI"
                     /locus_tag="ACFMWP_000321"
     CDS             11362..11814
                     /gene="rplI"
                     /locus_tag="ACFMWP_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HFC5890984.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEVRRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            11828..11935
                     /locus_tag="ACFMWP_000322"
     CDS             11828..11935
                     /locus_tag="ACFMWP_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HFC5890985.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKVGMVVFIVD"
     gene            complement(12602..13408)
                     /locus_tag="ACFMWP_000323"
     CDS             complement(12602..13408)
                     /locus_tag="ACFMWP_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC5890986.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKRAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGRQTASRPLPKLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(13409..14155)
                     /gene="pssA"
                     /locus_tag="ACFMWP_000324"
     CDS             complement(13409..14155)
                     /gene="pssA"
                     /locus_tag="ACFMWP_000324"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HFC5890987.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            14738..15220
                     /locus_tag="ACFMWP_000325"
     CDS             14738..15220
                     /locus_tag="ACFMWP_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HFC5890988.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSFSYYGGTVRSLIQNLK
                     "
     gene            complement(15272..16483)
                     /locus_tag="ACFMWP_000326"
     CDS             complement(15272..16483)
                     /locus_tag="ACFMWP_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HFC5890989.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            16706..19144
                     /locus_tag="ACFMWP_000327"
     CDS             16706..19144
                     /locus_tag="ACFMWP_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC5890990.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPSPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDSPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            19353..20663
                     /gene="tig"
                     /locus_tag="ACFMWP_000328"
     CDS             19353..20663
                     /gene="tig"
                     /locus_tag="ACFMWP_000328"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HFC5890991.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NSDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDIFKEQAERRVSLGLILAKLVDENKLEPTEEQVKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            20759..21373
                     /gene="clpP"
                     /locus_tag="ACFMWP_000329"
     CDS             20759..21373
                     /gene="clpP"
                     /locus_tag="ACFMWP_000329"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HFC5890992.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(21430..22695)
                     /gene="ispG"
                     /locus_tag="ACFMWP_000330"
                     /gene_synonym="gcpE"
     CDS             complement(21430..22695)
                     /gene="ispG"
                     /locus_tag="ACFMWP_000330"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HFC5890993.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(22711..23472)
                     /gene="pilW"
                     /locus_tag="ACFMWP_000331"
     CDS             complement(22711..23472)
                     /gene="pilW"
                     /locus_tag="ACFMWP_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HFC5890994.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLIGQ"
     gene            complement(23475..24569)
                     /gene="rlmN"
                     /locus_tag="ACFMWP_000332"
     CDS             complement(23475..24569)
                     /gene="rlmN"
                     /locus_tag="ACFMWP_000332"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HFC5890995.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(24712..25137)
                     /gene="ndk"
                     /locus_tag="ACFMWP_000333"
     CDS             complement(24712..25137)
                     /gene="ndk"
                     /locus_tag="ACFMWP_000333"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HFC5890996.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            complement(25196..26347)
                     /gene="zapE"
                     /locus_tag="ACFMWP_000334"
     CDS             complement(25196..26347)
                     /gene="zapE"
                     /locus_tag="ACFMWP_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HFC5890997.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
BASE COUNT         6292 a         6627 c         7222 g         6384 t
ORIGIN      
        1 ttgggtagcg attgggtttc agacggcata cattcaggat ttcaccgcct tatgccgtct
       61 gaaagacgtt tccgacccat ccctactaca cgctttgtcc gcaaacgcat cacaggcaag
      121 attatggaag tcatccgata ccccgattcc cctttcaaac tccaccaacc cttcccgccc
      181 gcaggcgacc agcctaccgc tattgccggc ttgctcgaag ggctttcaga cggccttgcc
      241 taccaaaccc tgctcggcgt aaccggttcg ggcaaaacct acaccatggc gaacgtcatc
      301 gcccaaagcg gccgacccgc catcatcatg gcgcacaaca aaacccttgc cgcccagctt
      361 tatgccgaaa tgcgcgagtt tttccctgaa aacgcggtgg aatatttcgt ctcctactac
      421 gactattacc aacccgaagc ctatgtgccc agccgcgacc tgttcattga aaaagacagc
      481 gcgatcaacg aacatatcga gcagatgcgc ctttccgcca ccaagaacct gatgacgcgc
      541 gacgacgtga ttatcgtcgc caccgtgtcc gccatctacg gtatcggcga cccgaccgag
      601 tatcagcaaa tggtgttgtc cgttaaagaa ggcgacacca ttgagcagcg cgacatcatc
      661 gccacgctcg tttccatgca gtacgagcgc ggcgatttgg actttaaacg cggcagcttc
      721 cgcgtgcgtg gcgacgtgat tgacgtgtac cccgccgaaa gctccgaaaa cgccttgcgc
      781 atcagcctgt ttgacgacga aatcgaccgc ctcgatatgt tcgacccgct ttcaggcagc
      841 cttatccagc gcgtcggccg ctacaccgtc ttcccgtcca gccattacgt taccccgcgc
      901 gataccgtct tgcgcgcctg cgagtccatc aaagaagaat tacgtgaacg cattgatttc
      961 tttaccaaag aaaaccgtcc cgtcgaacaa caacgcatcg aacagcgcac ccgctttgac
     1021 ctcgaaatgc tctacgaaat gggcttctgc aaaggcatcg aaaattactc ccggcacttc
     1081 tctggcaaaa aagaaggcga accgccgccc acgctgatgg actacctgcc tgacaacgcc
     1141 atcatgttca tcgacgaaag ccacgttacc gtcacccaaa tcggcggcat gtacaaaggc
     1201 gacgcatcgc gcaagcaaaa cctcgtcgac tacggcttcc gcctgccttc cgcccgcgac
     1261 aaccgcccgc tcaaattcca tgaatttgaa aaagtcatgc cgcaaactgt cttcgtttcc
     1321 gccactccag ccaaatacga agaagaacac gccggacaag tggtcgaaca agtcgtccgc
     1381 cccacagggc tggtcgaccc ccaaatcatc atccgccccg tcgccaccca agtcgacgac
     1441 ttaatgagcg aaatcaacga ccgcatccaa aaaggcgaac gcgttctcgt taccaccctc
     1501 accaaacgca tggcggagca actcaccgac tattacagcg aactcggcat caaagtgcgc
     1561 tacctgcaca gcgacattga taccgtagag cgcgttgaaa tcattagaga tttacggctc
     1621 ggcctgtttg acgtactcgt cggcatcaac ctcttgcgcg aaggcctcga tatccccgaa
     1681 gtctccctcg tcgccatcct cgacgccgac aaagaaggct tcctgcgctc acaccgcagc
     1741 ctgattcaaa ccataggccg cgccgcgcgc aacgtgaacg gcgtcgcgat tctgtacgcc
     1801 gacaaaatca ccgactctat gaaagccgcc atcgacgaaa ccgaacgccg ccgtgaaaaa
     1861 caaattaaat tcaacgaaga acacggcatc gtgccgcaac agattaaaaa acaggtcaaa
     1921 gacatcattg acggcgtgta ccacgaagaa gacggtggta aaggccgtag acaaggcaaa
     1981 aacaaggtta aagtcagcga aattcacaac gaagaagacg cggttaaaga aatcgccaaa
     2041 ctggaaaaag ccatgcagca ggcagctagg gatttgcagt ttgaagaggc ggctgtactg
     2101 agggatagga tacgggggat taaggaaggg ttgttgtttg ggagtgagta ataaaagcac
     2161 ttgaaagttt agttgatgac cacaatgttc ttaaaagatc tggagaaaca aaagatgtgg
     2221 agaaacatcg taacttgatc aattacattc tgaggactga aaatgacata ttcttttcgt
     2281 gtagaaaata taaatgatat atctgatatt cctgaaaatc atttggaaat agttagagct
     2341 gctctgccta gtaatagaag taatgcctta tctcgtgagc cagatggggc acaagctgtt
     2401 tttgtttatg aaattgatgg tgaatttaga gctaagttat ttgaccgcat aaaagataca
     2461 gacagttatt tacaagcaac agaggataat tactctaatg accctcgcag tataggagta
     2521 gtatacgttt tggagcaaca gcaagggtag cctgagggcc gcacaaactc tcaagctgac
     2581 gtgcagtatg tgtgatacgc acgcatgcgt tttttcgttc aaaccattgt tttaaacctt
     2641 gtatcgaaac atcactcgct gctttatctt gaaaaaatgc cgtctgtaag caaacatgct
     2701 tcaaacagca tttttttatc cggcggtttg ttagcccatc cgtttgaata ccaagtccca
     2761 aacgccgtgc ccgaggcgtt tgccgcgcgc ttcgaatttg gtttcggggc ggtagtccgg
     2821 ggtgggggcg tagtctgccg ccgtattttg caggctgtcg aagctactga ggacttcaag
     2881 catctgccgt gcatattctt cccagtctgt cgccaggtgg atatagccgc cggttttgag
     2941 tttgggcagc agtttggcga tgaagggggc ttgtatcaga cggcgtttgt ggtggcgttt
     3001 tttgtgccac gggtcgggga agaatatgtg gatgccgtcg agcgagccgt cttgcagcat
     3061 attttcgata acttctacgg catcgtgccg catcacgcgg atgttttcca aatggttttc
     3121 gttgatgagt ttgagcagat tgcctacgcc gggaccgtgt acgtcgatgg cgaggaagtc
     3181 ggtttcgggc aggcggcggg cgatttctgc ggttgccgtc cccataccga agcctatttc
     3241 gaggattttg ggtcggttgc ttccgaaatt ggcatcaaga tcggccggtg ttgcttggta
     3301 atcgatgccg aagctgtccc ataaggtatc gatggcgcgt tgctgtgcgg cggtcatatg
     3361 gctttggcgg aggacgaagc tgcggatgct gcggggatgt tcggcttgcc agttgttttg
     3421 tgtttggttt tcggcggtgt ctgtcataat gcttccgtgc gcttgtgcaa tcaggatgcc
     3481 gtctgaatgt gaaaggcctg ttcggacggc gggaagggaa aggggcgatt atacctgttt
     3541 cgtttcggca gggtaggtgt aacgctgttc agacggcatt ttgccattgt tgcagcagtt
     3601 cttgcaggac gcttttttgc ccgtatccgt tgtttatggc ttcttgcagg tagcggcagg
     3661 ctttttcttt gtccggcccg acaccgtgtc cgctgtaatg gatgcaggcg aggttgtaga
     3721 acgccatact gtctttttgc gcggcggctt gttcaaacca tttgcgggct ttgccgtagt
     3781 cggcggctat gccctgtccg aagtagtaca tactgcccag attggtttgg gctttgctgt
     3841 gtccgagttc tgcggcttct gtgtagagtt tgagcgcggc tgcgtattcg ggcgcacatt
     3901 gtaatccgta atgcagggct tgggcttttt gataaagctg ttctgccctt tgccgcctga
     3961 tggcggaatc tttgatgccg ccgtattggt cgggatggtt taacgcgctg tcggatatga
     4021 gtttctgata ggcggaaagg ctgccggctt cggctgcctg ccggtaataa tgccgggctt
     4081 tttccgtatc gggggctatg cccaaaccgt agcggcagat gtcgcccagt atccgcaaac
     4141 cttcgggatg gcgttctgct gcggctgctt cggcatgatg cagggcaagt ttgtggtttc
     4201 tttcctgata tttgccttgt aggtagatgt cggccagtgc ggcatgggca tcggggtcat
     4261 tttcctgtgc cgcctgttgg aaccggtaaa cggcttcatc gggagccgta ggtaggatga
     4321 gttcggcaag cggggtgtag gcgggaatgt atccttgttg cgcggcggcg cgcaaatgat
     4381 tgacggcctg tgccgtgtcg actttcgtcc cttgcccgaa acggtattgc agcccgagct
     4441 gccaatgtgc ttccggcaag ccttgtgccg ccgcttttcg gtagagcagg tgcgccgttt
     4501 caaaatccgg cggtgtgccg taccggcagt attgggcgag cagatattgt ccgtgggggt
     4561 tgttgttttt tgcgctggtt tttgcccatt cgagtgcttc ttcaaaatgc cgggacgcgt
     4621 acagcaggta catcaggcgg acttgcgctt cgggcactcc tgcttctgcc ggaggcctgt
     4681 aaagcgatat cagggtttca ggggggcgcg ccttccaatt cttggatata tgccagattg
     4741 taacgcgcgt agggatgccc ctgttcggcg gcgatgcgga gcatttccat accttgttcg
     4801 cggtcttggt aggggctgtc cgcatccatc aggtgttttg ccaactcgaa tgcggcggcg
     4861 ggatgacctg ccaaggccgc ttctgtcagc agtcggcgga cttcggtaaa gttatattgt
     4921 ttttgagaaa ggcattctaa ggtctgccga tagggtaagt cgggattgtt catatcagat
     4981 cgttttccgt tttgtcgaat catcgttata tgttatgaag ttaggtttat atcggcacgc
     5041 gggcctgctg tatcatattt ttacagacgg tttttgtttt ggcggcatac taatgcagat
     5101 gattataaat ggtttccgcc aatgccttgc tgatgccttc cactttttcc aagtcctcgc
     5161 ggctggcggc aatcacgccg cgcaggccgc cgaagcgggt gagtagggct tggcggcgtt
     5221 tgctgcccac gccggggatg tcgctgaggg acgaggtaac gcgtgctttg tcgcgttttt
     5281 tgcggtggcc tgtaatggca aagcggtgtg attcgtcgcg cacggtttgc agaaggtgca
     5341 gggcggggct gtgcgggggc aggcggaaga cttcgccggt aaaaggcagt atgagctcct
     5401 ccataccggc tttgcgctcc gggcctttgg cgataccgac caaaggaatg tgcagcccga
     5461 gttcttccca taccgatacg gctacgccga tttgcccttt gccgccgtca attaacacgg
     5521 catccggcca tttgacggtc tcgccgttgg cttcggcctc ctgcattttg ccgtaacggc
     5581 gcgtcaacac ttcgcgcatg gcggcgtagt cgtcgccggg tttggcggtc gtgatgttgt
     5641 agcggcggta ttgcgaaggc tggatgtttt gctcatcgta cacaacgcag gacgcaatag
     5701 tggcttcgcc ttgtgtgtgg ctgatgtcga aacattcgag gcggttgagg ccgtctgaat
     5761 ccataccgag gattttggcg agttcgtcga tgcggtgttg ctggctgctt tgttgcaggc
     5821 ggcgttgtgc aatcgccatt tgtgcgtttt gttccgccat tttcaaccag actttgcgtt
     5881 cgcctatggt tttggtgaca aattgcatct gcttgccgtg ttcgccttcc aaagcctctt
     5941 tcagcgcatc gggaacggaa aagttgctaa taatgatgtc gggtttgctt ttgcccaaat
     6001 aatgttgggc gacgaaggct tcggcgtaat cttgtccgtt tggatcggga tcgtttttgg
     6061 tgtcggggaa aaagcttttg tcgccgacgt gccgcccacc gcgtatgctg acccagtgta
     6121 cgcagacgat gccgtctgaa accgccagcg cgagcaaatc gatatcgttg gggttgttcg
     6181 ggtttttgct gtcgatgaac tggttgctct gcataatgcc gagtgcttgg atttggtcgc
     6241 ggtagcgggc ggcttcttca aattgcagat tcgcggcggc agtttgcatt ttgtgttgca
     6301 gggtgcgggt cagttcgtcg gttttgccgt tgagaaaagt ggcggcttga cgcacgctgt
     6361 cgcggtagtc ttcttcgctg atgtgtccga cgcagggcgc ggtacagcgt ttgatttggt
     6421 acagcaggca agggcggtcg cggtgttcga acacgctgtc ttcgcaggta cgcagcataa
     6481 agactttttg caggacttgg atgctgtcgc gcacggcgtt gctgttggga tacgggccga
     6541 agtattggtt gggctttttc agcgtgccgc ggtaatacgc catttgcgga tattgatggc
     6601 cgctgagcat cagataagga tagcttttgt cgtcgcggaa aagaatattg tatttgggcg
     6661 acagggcttt gatgaagttg ttttcgagaa tcagggcttc ggattcggag cgggtgatgg
     6721 tggtttcgat gtggcgaacc tgttttacca tcaatgcgat gcgcggcgaa tggtcgtttt
     6781 tttggaaata gccggacacg cgccgcttga ggttgaccgc tttgccgacg tataagactt
     6841 tgccgccttc gtcaaaaaaa cggtacacgc ccggcagctt gggcaggttt ttgaggaaga
     6901 gcgggatgtc gaattgttcc ggagaacggt tttctgtatt catatcaatc atttgaaaaa
     6961 cggcttcaga cggcatatcg gcagcggcag ccttatccgt tcggaaaagc tgtcgggtgg
     7021 ttatatgcgg tcaatcgatt tttacccgtt tcaggcgcaa ggcattgctc aacacggaaa
     7081 ccgagcttgc cgccatggcc gcgcctgcga tgacgggatt taaaaagcca agcgcggcga
     7141 gcggaatgcc caagatattg tagaagaagg cgaaaaacag gttttgcttg atgtttttca
     7201 aagtggcttg cgacaccagc agggcatcgg cgagctgatt aaccgaatgc tgcatcagcg
     7261 tggcggacgc ggtgtgttcg gcaacgtccg caccgccttt catggcgaag ctgacgtttg
     7321 cggcggcgag cgcgggcgcg tcgttgatgc cgtcgccgac catcgccacg gttttgccgg
     7381 cggctttgag tttctgcact tcggcggctt tgtcgcgcgg actcatattg ccgaaggcgt
     7441 gagcgatacc cagttgttgg gcgacgtatt cgaccgtgcc ttggttgtcg ccgctcatga
     7501 tgtaaacatc gatattgtgt tttttcagac ggcctatggc ttcggcggta tcggctttca
     7561 acgcgtcggc aagtgcgaat gcaccgatag gtttgttatc gactgagact gcaacaatgc
     7621 ttgcaatgtc ccaaacgccg tctgagaact cgggcaaggt cagttcggca aattcggctt
     7681 tgcccgcttt caccaatccc gcaccttcca cttcggcggc aatgcctgcg ccgacaacgg
     7741 tttgcgcgtt ttgtgcggcg ggaatctcca aaccgcgcgc ttgggtggcg gaaacgatgg
     7801 ctcgggcaag cggatgggcg gcgttttgtt cgacggcagc ggcgatgcgg tacaaatcgt
     7861 ctttgtcaaa gccgctgtcg ggaacacaat aaacggcggc aacctgcggc ctgccttcgg
     7921 tcagcgtgcc agttttgtcc aacacaacgg catcgacgtg ggcggcttct tccattgccg
     7981 ctgcgtcttt aaaccaaatg ccgtgtttca ctgctttacc catgccgacc ataatcgcgg
     8041 cgggtgtagc cagaccgagc gcacacgggc aggcaatcac caaaacggcg acggcgtgca
     8101 tcagcgcaac cgtccaatcg cccttaatca gccaagtaac aataaaagtc aacaacgcga
     8161 tgcccacgac ggcaggcacg aacaccgccg ccgccttgtc cgccacgcgc gcaatcggtg
     8221 ctttactgcc ttgcgcttca gagagtgcgt tcatcatgtc gccgagcagg gtttggctgc
     8281 cgagctgcgc ggcgcggtac accacgctgc cttcggtcat cagcgcgccc gccaacactt
     8341 tgccgcccgc ctttttctct tcgggattgg attcgccggt aagatggctc tcgtccgccc
     8401 agccgctgcc gctttcgata acgccgtcgg cggcaatgcg ttcgccgtgg ttggcgcgga
     8461 taaggtcgcc gatttgcact tggtcgatgg gaagctgttt ccattcgcca tcgcgctgca
     8521 cgttgacttg ggtcggcgtg agtttgagca gcaagcccaa gctgttcagg ctggattttt
     8581 tggtacggtg ttccaaaaat ttgcccagcg acacaaaacc aatcaccatc acgcccgctt
     8641 caaaatacac gtgcgccatt ccgtgtgccg cgtgcggact gaaaaacaac atataaacgg
     8701 aatacaggta aatcgacacc gtgccgatag taaccagcac gtccatattc gccagcccgc
     8761 ctttaatgct cgcccacgcg cttttgtaaa acgggattgc cagccaaagt tgcacaatgc
     8821 ttgccagcgc aaactgccac aacggcggaa tcatccaatc gtgcctaccg atcatcatcc
     8881 ccgccatacc gacaaggaac ggaatattga tggcggacag cagccacagc cgccagccga
     8941 tatggtgttc tgcttcagct tgcggcaatg tatcttccgt tttttccttc gcgccgtaac
     9001 cggttttctc aatgattttg gcaatgtcgg ctactgaggt tttgctgtcg tcaaacacta
     9061 cctgcgcctc ttcgctggcg aagtttaccc ccgccgattc gacaaaatct tttttgttca
     9121 acactttttc aatgcgcgaa gcgcaggcct ggcaggtcat gccttcgatt tggaaacgga
     9181 ttttttgttg cataagcgtg attcctgctt tgatattcag acggcagtta aggctgcggg
     9241 atgccgtctg aacgccggta tggtcgaaat ttctcaaacg cgccgataat tcgagtagaa
     9301 tccgaaaact tgacacagca aaggaaaaac aatgtcccaa caccgcaaac tgattatttt
     9361 gggttccggc cccgccggat acaccgccgc cgtctatgcc gcgcgcgcca atttaaaccc
     9421 cgtcattatt acaggtatcg cgcaaggcgg gcaactgatg accaccaccg aagtggacaa
     9481 ctggcctgcc gatgccgacg gcgtgcaagg gccggaattg atggcgcggt ttctcgccca
     9541 cgccgaacgt ttcggaacgg aaatcatttt tgaccaaatc aacgccgtcg atctgcaaaa
     9601 acgcccgttt acactcaaag gcgatatggg cgagtacact tgcgatgccc tgattgtcgc
     9661 aacaggcgcg tccgccaaat acctcggttt gccgagtgag gaagcgtttg caggaaaagg
     9721 cgtttccgct tgtgccacct gcgacggttt cttctacaaa aaccaagatg ttgccgtagt
     9781 tggcggcggc aatacggcag ttgaggaagc gctctacctt gccaatatcg ccaaaaccgt
     9841 taccctgatc caccgccgca gcgagttccg tgccgaaaaa atcatgatcg acaaactgat
     9901 gaaacgcgtg gaagagggca aaatcatcct caagctggaa agcaacctgc aagaagtact
     9961 gggcgacgat cggggcgtaa acggcgcatt attaaaaaac aacgacggtt ctgagcaaca
    10021 aattgccgtc agcggcattt ttatcgccat cgggcacaag ccgaataccg atattttcaa
    10081 aggtcagttg gaaatggacg aagccggtta cctgaaaacc aaaggcggca cggcggacaa
    10141 tgtcggcgca accaatatcg aaggcgtatg ggcggcgggc gacgtaaaag accataccta
    10201 ccgtcaggcg attaccagcg cggcttccgg ctgtcaggcg gctttggacg cggaacgctg
    10261 gctgggcagc caaaacattt gaatgccgtc tgaaaccgaa attttcggcg gaatgcaaat
    10321 ttttcgcacc aaatccttga ttccgtcggc aaaccccaat ataatgcctg ctctttgaac
    10381 cttgccttct gctttcgcat ggcagaaggc tgttttacca tccataagga gataacatgc
    10441 gtcattacga gatcgtgttt atcgttcatc ctgatcaaag cgagcaagtg cctgctatgg
    10501 ttgaacgtta caaaaccatg attgccgaag caaacggtaa gattcaccgt ttggaagatt
    10561 ggggtcgccg ccaactggct tacccgatta acaaaatcca taaagcccat tacgttttga
    10621 tgaacatcga aaccactccc gaagtggttg aagagctgga aaccgcattc cgcttcaatg
    10681 atgccgtatt gcgccatcta accatcaaaa ccaaacacgc cgttactgaa gcatccccta
    10741 tgttgggtgg tgaaaaggct aagaacctgt tgagcggtgc gtctgaagaa gcggtcgccc
    10801 aataattggg attcaataat cttgtttcgc ttgccgcgtt aattgaaaag gttttcccta
    10861 ttcgatatac gcctgccgga atccctgttt tagatattat tttaaagcac gaatcgtggc
    10921 aggaggaaaa cgggcagcaa tgccttgtcc aattggaaat tccggcacgg attttaggca
    10981 ggcaggcgga agagtggcag tatcggcaag gtgtatatgt tcacgtcgaa ggttttttag
    11041 ctcaaaaaag cagacgttcc cttatgccga tgctcaggat acaaaatatt caagaatata
    11101 aaggttaaac gacaatggct cgtcaatcat tcaaacgtag aaaattctgc cgtttcacgg
    11161 ctgaaaaaat ccaagaagtc gattacaaac aagttgattt gctgaaagac tttatctctg
    11221 aaaacggtaa aatcattcct gcacgcatca caggaacgaa ggcattctac caacgccaat
    11281 tggctgttgc cgtaaaacgc gcacgcttcc tggctctgct gccttacacc gaccaacaca
    11341 aataattttg gagattgaat catgcaaatt attctgttag aaaaaatcgg cggtctgggc
    11401 aacttgggcg atatcgtaac cgttaaaaac ggctacgccc gcaactttct aattcccgca
    11461 ggtaaggcaa aacgtgcgac cgaagcgaat atgaaagagt ttgaagtacg ccgcgccgaa
    11521 ttggaagcca aacaggctga aattttggca gatgcccgag tccgtcagga aaaattggac
    11581 ggtcaaaccg ttaccgttgc tcaaaaagcc ggtgtggacg gtcgcctgtt cggttccgtt
    11641 accaatgccg acattgctgc tgcaatcgtt gctgccggca tcgaagccgt gaaagcaaat
    11701 gtacgtctgc cgaacggtcc tctgaaagcc gttggcgagt acgaagtgga agtggctttg
    11761 cacactgatg ccgttgctaa aattaccgtt gccgtcgttg ccgcaaccga gtaattgaaa
    11821 ttatcagatg ccgtctgaaa ccctgccgat tgtcggaatg tggtttcaga cggtatttgt
    11881 tttgttttcc gtatattctg caaaagtcgg gatggttgtt tttatagtgg attaaattta
    11941 aaccagtaca gcgtacctgg cttcaatata ctcaatagga taggtctctt cctaaccgaa
    12001 aaaataattg tcttttccct tgcaaataat tgaaatcaac agattactaa aacacagcca
    12061 aaatattcaa ttgacaaaaa cttttctgat tttgagaaat ctgtgaaaat caggggatta
    12121 tttattttga aaatggtatc gggcataaaa tttggctgtg tttcaatatg gtgctgataa
    12181 catactttgt ttcaaaatgt tcaataggat aacttcctga ttgaccgaaa aataatggcc
    12241 ttttcccttg caagcagttg aaatcaacag attgtcaaaa tacatcctaa aaatttaata
    12301 acttatatat atgattgcaa aggttgcggc ttgtatgccg gtcattatgg cggaaatacc
    12361 gtttgggagg cagccgcatc gcgtggaatc ggcacggcag gcgatgcgcc gatgccttcg
    12421 ggcgtgaagg cggggcaatc ggcagtttgg aaaaaggcaa tggaatctgt gggcagaaga
    12481 agttaagggt aaaagtcggg cgcacggtca ggttgtctgt ccttttgtcg gaacaggaga
    12541 ctgggcagct ttgtcctgat taattgcttg tgcaaacggt aaaaaggttt tttcgtgtgt
    12601 tttaaagcag gttgtacagc atttttccgg caatcaaaag cagcataatg ccgaaggatt
    12661 ttttgagttt ggcagaagaa agtttgtggg cggttttgac accgagcggg gcaaaggcaa
    12721 tggttgccgc gctgaggacg gcgacggcgg gcaggtaaag gaagcccagt gacccttcgg
    12781 gcaatcctgc aatattcagg ccgttgagca gatacgatat tgcgccggag agtgcaatcg
    12841 gccaggcaag gccggatgat gtgccgatgg ctttatgggc ggggaagccg cagtggatta
    12901 agaaggggac ggaaagtgaa ccgccgccta tgccgaccca gctcgacatt gtgccgaaca
    12961 gtgtggaaac cgcagtcagt ccgggcagct tgggcagcgg gcgggatgcc gtctgacgac
    13021 cggtatgcag tgttttgaat gcgacggcgg ttaaaaacag gatgaagaaa atttgaagcc
    13081 cgaacgcggg gatatatttt gcggagagtg cgcccgtgaa tacgccgaat atcatacccg
    13141 gcatcatcgc aaatacggtt ttccagtcga ccgcccgttt tttgtgctgc cccaacatac
    13201 tggaaaaggc ggtgaagacc atgacggcga aggatgtgcc gacggcgagg tgttgcgcgt
    13261 aaggatgttg tgccaaaccc tgcaaatcaa gcacccataa aacgacaggg acaatcagcg
    13321 tgccgccgcc tacgccgaac agaccggcaa taaaacctgc cgcactgcct acggcaagca
    13381 ggattaagat aatgtcccaa tgccacattt aatccgcctt tctgtatttt ttccaaaatc
    13441 ggcgtgccgc cataatgtag ccggacaggc tgtatccgag aaagaacagg aagaggacga
    13501 gcgacggttc ccaagtgacc agaagcagca gtaagacggc aagcagcatt ccgacaaagg
    13561 ggacttgtct gcggatgttg atttctttaa aactccaaaa agggatttgg acaatcatcg
    13621 acaggccggc aaacagtgtg atgcccaatg cccaccagtg gacggcgggg aatttttcga
    13681 cgctgtggtt gacccaaatc agcccgacaa tcagcgcggc ggcagtcgga ctgggcacgc
    13741 cgataaacca gcgtttgtcc accttgccga tgagtgtgtt gaacagggcg aggcgcaggg
    13801 cggcgcaggc gcagtagatg aaggcgacgg aataaccgat tttgccgaac tgccaaagct
    13861 gccatttgta ggcaatcaga gcgggagcaa cgccgaagct gaccatatcg gcaaggctgt
    13921 cgagctgctc cccgaacgcg ctttggctgt tggtcagccg cgccacgcgc ccgtccatac
    13981 cgtccagcaa catagagatg aataccgcga tggcggcggt ttcataacgt ccgtgcatgg
    14041 attgggtgat tgcataaaat gcggaaaaca gcgcggcgat ggtaaaggag ttgggcagca
    14101 ggtagatact gttttgacgc agggagcgtt gcggggtgtt ggtcggggtt tccatagctg
    14161 aagtgtctca cggacgtgga gaatcgatag gggattataa cccaaaccat tatcgaacaa
    14221 tacgcccttt aggatgaagc cctcggaggc ggtttgtttt tctgatggcg gatgctttgc
    14281 ggggcggttt gactctgcct gccaccgggt gtgttgtttc ggatttttgc cggatggata
    14341 ttgttgccgg gcatttctgg gcttgccgga aggtatcggg gggagggcat cggaatatgc
    14401 ggcgcaccgt tcaaaccggg gcggcgtttc cctattttca gggggttgca ggtttcaaca
    14461 aattgaaaga tattttttgc atttccgacc gtatgctgat tttgaagcgg gataaattat
    14521 aggacaaggt ttttcgcccg ccgcaaaggt tggccgcaat gccgtctgaa aacaacggct
    14581 tgccgctaag gcggcggtat gcggatttgc gctgccgaaa tcggtttgcc atacccggcg
    14641 gtgcaatctg cggggaggga taagccgata aggcgggact tatcctgttt tttgtttata
    14701 atgcaacaga atttggacga accgtcggga atttatcatg atgaaaaaga tactggccgt
    14761 atcggcacta tgcctgatga ctgcggcggc acgggctgcc gatacttacg gctatctcgc
    14821 cgtttggcag aatccgcaga atgcggacga tgttttgcag gttaaaacca caaaagaaga
    14881 ttcgacgaaa agcgaagcgt ttgccgagtt ggaagccttc tgcaaaggtc aggacacgct
    14941 tgcgggcatt gccgaagacg agccgaccgg atgccggtcg gtcgtgtcgc tgaacaatac
    15001 ctgtgtcgcg ctggcatacc cgaaagcctt gggcgcgatg cgcgttgaaa acgccgtcgt
    15061 gattacttct ccgcgtttta cgagcgttca tcaggtcgca ctcaaccagt gcatcaaaaa
    15121 atacggcgta cagggacaat gcggcttgga aacagtgtat tgcacatctt tttcttatta
    15181 cggcggaact gtgcgctctt tgattcaaaa tctcaaataa aacggaaaat gccgtctgaa
    15241 agatgttcag acggcatttc tatatcgacg gtcaggattc tttcggatcg ggcagcaggc
    15301 tgttcaacat aatggcaagt acggcgcaca agcccacgcc ggcaaagctg aagctgccca
    15361 atttgagcgt catgccgccg atgcccgtgg tcagtaccga gctgacgatg accaggtttt
    15421 tcggcagcat caaatcgact ttggcatcaa tcaacgtttt cacgcccaaa gaagcaatcg
    15481 tgccgaacag cagcagcata atgccgccca ttactggcat cggaatggaa gccaaaaacg
    15541 cattgaattt gccgaaaaac gccatgcaga cggcaaaaac cgccgcccaa gtcatgatga
    15601 cggggttgct gtttttggta atcatcaccg cacccgttac ttcgccgtag gtcgtaaccg
    15661 gcgggccgcc gatcagaccc gcaacgcata cgcccaaacc gtcgcctgca agggttttgt
    15721 ccaagcccgg gtctttcgta tagtctttcc ccgtcacatt gccgattgcc atgatgccgc
    15781 cgatgtgttc gatggcgggg gcgacggcaa cgggcagcat aaacagtgca gcctgccagt
    15841 tgacctgagg cgtttcaaaa tggggaacgg cgaaccaggg cgcgtgtgca atgcttgccg
    15901 tgtccaccag tcccatcagc agtgccaaaa cataacccga agcgacaccg atcaagatgg
    15961 gaatcagctt catcatcctg ctgccgaaaa ccgatacgat ggcggtaacg gcaaaggtaa
    16021 agccggaaag aatcagcgaa tcggtatagt cgatgacctg tttgccgtcc gcctgaccca
    16081 ttgccatgct gcttgccgcc acggcaacag acagaccgat gaccatgatg acggggccga
    16141 tgacgaccgg aggcagcagt ttgtgtaccg ctgccagtcc gcgccaacgg atcagcgcgg
    16201 caaacacaaa atacataaag ccggcggcaa acagtccgaa catggtggaa ggcagccccc
    16261 attcgccgac ggagtagata atcggtgcga taaaggcaaa cgaagaacca agaaaaatcg
    16321 gcactttgcg tttggttgtg atttggaaca gcagcgttcc caagcctgcg cccaaaagcg
    16381 caagagccgg attcagaccg gtcagcaggg gaaccagcac cattgcgccg aatgccacaa
    16441 ataaaatctg cgcgccggaa acggcaagtt tcagttggtt cataccatct tctttcaatc
    16501 ggttcaaacg gcacggatta tactggtttg ccgagggtct gcgtaaaaat acatatggcg
    16561 ggcaacagat atgccgtctg aaaggcaatg tctgtctgtt gcaggatgaa agcaggagaa
    16621 atggagtata atccgacact ttccatattc aatccgcaag ccgtccggct tccttatttc
    16681 agacggcatt ttccggtaat acggcatgac agaaaaatcc cataaaaaaa cagcaaaagg
    16741 cagggcggga agcccgtccc caacgtccgc acgcaacaag aaagccgaca acggcgcacg
    16801 gggcaataaa gtttccgagc ggctcaaggc ggtcaaagag ttgcagaaaa ccgaaaccaa
    16861 aaaggcgcgt cccgaacatg tcgtcaacct tatcggcgac gcactgtggc tgatgggttt
    16921 ggcggcaacc ttgtatttgg cgatttccct gattagtttc gatatgggcg atccgtcttg
    16981 gtcgcacagt tcgccggttg tggaagatgt cgccaattgg ggcggactgt tcggcgcgta
    17041 tgttgccgat gtcggctatt atcttttcgg ctggtcgttc tggtggtgga tagcggctgc
    17101 ctgcgtcatg ctgtataaaa attttcgtct gcacgcaaaa cagacggaaa acgaggcata
    17161 caaccacaaa atcgctgccg ccgcgctgtt tgtcctgacg gtcttcagcc ccgtcttgga
    17221 gtattttgtg ctgggcggaa aatatgccga ctccctgcct gtcggagcag gcggtatggt
    17281 cggcatacgc gtcggcgcag tgtttgcgtg gctgctgggg aaatcgggca gcctgctgat
    17341 tatcttggtt gttctgctgt tgtcgttgtc cctgctggtg cagatttcat ggctggaatt
    17401 tttgaacggt gcgggcaggg cggttcaaaa ccgcctgagt gccttatccg gcaaggtcat
    17461 ggctttggga aaacgccggc cgaataccaa aacagacggt gtcgataccc aaaatacacg
    17521 gcgcatggta aaagaagcca agaatattac ggccaaaccc gttgccttgc ccgaaggcag
    17581 cagcagcaac cgcaaatccg tcgcggtttc cgtcgcgccg tcgcccaaaa ttcaggtttc
    17641 tctgtttgaa gatgacgaac ctcggcaggc gggcgaatac cacaagccta cattgaacct
    17701 attgcggatt cctgacagcg aacccgtcag catcaatccc gccgaattgg agcgcactgc
    17761 cgaactgatc gaatccaaac tggcagaatt cggcatcggc gtacaagtcg tatccgccac
    17821 atccggtccc gtcatcacgc gctacgaaat cgaacccgcg caaggtgtta aaggcagcca
    17881 aattgttgcc ttgtcgaaag atttggcacg ctctatgtcg ctgcaatccg tgcgtatcgt
    17941 cgaaaccatc gcaggtaaaa acacgatggg catcgagttg cccaacgaca aacgccaaga
    18001 cgtgatgttg agcgaaatct tgtcctcgcc cgtgtttgcc gaagccaaat ccaagctgac
    18061 cgtcgcgctg ggcaaagaca ttgccggtac ccccgttgtc ggcgacttgg cgaaaatgcc
    18121 gcaccttttg gtcgccggta tgactggttc gggcaagtcc gtcggcgtga acggcatgat
    18181 tatgtctatg cttttcaaag ctacgcccga cgaagtccgc tttatcatga tagacccgaa
    18241 aatgcttgag ttgagcattt acgacggcat tccgcacctg ctctgtcccg tcgtgaccga
    18301 tatgcgcgaa gcggggcagg cgttgaactg gtgcgtcgcc gaaatggaaa aacgctaccg
    18361 cctgctttcc cacgccggtg tacgcaatct ggaaggcttc aaccaaaaag tcgaagccgc
    18421 aaaagcggca ggcaagccgc tgctcaatcc gttcagtctg aaccccgaca gccccgagcc
    18481 tttggaaaaa ctgccgatga ttgtggtcgt tatcgacgaa cttgccgacc tgatgatgac
    18541 cgaacgcaaa gccgtcgagc agcaaatcgc ccgtctcgcc caaaaagcgc gcgccgccgg
    18601 tatccatatg attgtcgcca cccaacgtcc cagtgtcgat gtcgttactg gcctgattaa
    18661 agccaacatc ccgacgcgta tggcgtttac cgtgcaaagc aaaatcgaca gccgtaccat
    18721 cctcgaccaa atgggcgcgg acgaactgct caaatatggc gattcgctgt tcctccagcc
    18781 cggcagtgcc gaaccgaccc gcctgcaagg cgcgtttgtt tcagacgacg aagtacatca
    18841 agtcgtcaac tacgtcaaat cgcaagcccc agccgactat attgaaggtc tgctcagcgg
    18901 cgaggccgcg ctggaaactg ccaatatcgt taatccgaat gcagacagcg acgaattgtt
    18961 cgatcaggca gtcgcctatg ttttggaaag caaaaaaacc tccatttcgt ctttgcagcg
    19021 gcagttgcgt atcggctata accgcgcggc aaacctgatg gaggcactgg aaaatgcggg
    19081 tgtcgtttct cccaccgacc tcaacggcag ccgtaaaatt ttggcgcaca aggaccattt
    19141 gtagctcgta ttgcaaaatg ccgtctgaac ggcggaattg gcgtttcaga cggcatatta
    19201 tgtttcaggc ggaacattgt gatatacttg ccagctaaaa tctccccttt gcggcaatgc
    19261 ggttcaaata tccgtaccgt tgcgctgttt gcttccccat gcagggaaga aagtttacca
    19321 ttttatcaac acaacaaatt taagggctta tgatgagcgt aactgttgaa actttagaaa
    19381 atctggaacg caaagtagtg ttgtccctgc cttggtccga aatcaacgca gaaaccgata
    19441 aaaaactgaa acaaacccag cgccgtgcaa aaatcgacgg tttccgcccg ggtaaagcac
    19501 ctttaaaaat gattgcccaa atgtacggtg cgagcgcgca aaacgacgtg atcaacgagc
    19561 tggtgcaacg ccgcttccac gatgttgccg ttgcccaaga gttgaaagtg gcaggcttcc
    19621 cccgttttga aggcgttgaa gaacaagacg ataaagaatc tttcaaagtt gccgccattt
    19681 ttgaagtgtt ccccgaagtc gttatcggcg atttgtctgc acaagaagtt gaaaaagtaa
    19741 ccgcttccgt cggtgatgcc gaagtggacc aaaccgtaga aatcctgcgc aaacaacgca
    19801 cccgcttcaa ccatgtcgaa cgcgaagccc gaaacagcga ccgcgtcatc attgactttg
    19861 aaggcaaaat cgacggcgaa ccttttgcag gcggcgcatc caaaaactac gccttcgtat
    19921 tgggcgcagg tcaaatgctg cctgaatttg aagccggcgt agtcggcatg aaggctggcg
    19981 aaagtaaaga cgttaccgtc aacttccctg aagaatacca cggcaaagac gttgccggta
    20041 aaactgccgt gttcaccatt acgctgaaca acgtttccga agcgactctg cctgaagtcg
    20101 atgcagattt tgcaaaagcc ttgggtattg cggatggcga cgttgccaaa atgcgcgaag
    20161 aagtgcagaa aaacgtaagc cgcgaagtgg aacgccgcgt aaacgaacaa accaaagaat
    20221 ccgtaatgaa cgcgctgctc aaagccgtag agctgaaagc acctgttgct ttggtcaatg
    20281 aagaagccgc acgcttggca aacgaaatga aacaaaattt tgttaaccaa ggtatggctg
    20341 atgctgccaa cttggatctg cctttggata tattcaaaga acaagccgaa cgccgcgtat
    20401 ctttgggtct gattttggcc aaactggttg atgaaaacaa actggaaccg actgaggagc
    20461 aagtcaaagc cgttgtcgcc aacttcgcag aaagctacga agatcctcaa gaagtaatcg
    20521 actggtacta cgcagagcct tcccgcctgc aagccccgac ttctttggcg atagaaagca
    20581 acgtcgttga tttcgttttg ggtaaagcca aagtaaacga aaaagctttg tcttttgacg
    20641 aagtgatggg cgcgcaagcc tgattatcct gaaaatgccg tcttagggca gtttttgaaa
    20701 gcaccgaagc cgcttttaaa gcccgctttg gtgcttttac atcatgaaag gagacgaaat
    20761 gtcttttgat aactatcttg tccctaccgt tatcgagcag agcggtcgcg gtgagcgtgc
    20821 attcgatatc tattctcggc ttttgaaaga gcgcatcgta ttcttggtcg gcccggtaac
    20881 cgacgagtcc gccaatctgg tggttgccca actgttgttt ttggaaagtg agaatccgga
    20941 taaggatatt ttcttctata ttaactcgcc aggcggttcg gtaacggccg gtatgtcgat
    21001 ttacgacacc atgaatttta tcaagcccga tgtatcgact ttgtgcttgg ggcaggcagc
    21061 aagtatgggc gcgttcttat tgtcggcagg cgaaaaaggc aaacgtttcg ccctgcccaa
    21121 cagccggatt atgattcacc agcctttaat cagcggcggc ttgggcggtc aggcatccga
    21181 tattgaaatt cacgcacgcg aactgttgaa aatcaaagaa aaactcaacc gcctgatggc
    21241 gaaacattgc ggccgcgatt tggcagattt ggagcgcgac accgaccgtg ataatttcat
    21301 gtccgccgaa gaggctaaag aatatggtct gattgatcaa atcttggaga accgtgcttc
    21361 tttacagttt taataagaaa tctgagagaa acaaatgtcg tctgaaaaca gttcaggacg
    21421 gcatttgtct tatagggact gtatagggat gattttgttc tggttgcgtt tggagccgtt
    21481 ttcaccatag ttggttttga catattcctc tacaatagct aggaattcag ttgcaatatt
    21541 atcacctttc agtgttattt tgcgctcccc gtccacataa accggcgcga cgggtgtttc
    21601 tcccgtaccg ggaaggctga tgccgatgtc ggccaatttg ctttctccgg gcccattgac
    21661 aacgcagccc attacggcaa cgttcaggga ttcaacccca ggataaaggg tacgccatat
    21721 agacattttt tggcgcaggt aattttgaac atcttgtgcc agctcttgaa atacggtact
    21781 ggtggtacgc ccgcagccgg ggcaggcggt aaccatcggc gtaaacgaac gcaatcccat
    21841 agtttgtaaa atctcttgcc cgacgacgac ctcctgagta cgcgggctgc caggttccgg
    21901 agtcagtgaa atgcggatgg tgtcgccgat tccttcttga agcaagacgg ataatgccgc
    21961 cgttgatgcg acaatgcctt tgctgcccat accggcttcg gtcaaaccca aatgcagcgg
    22021 ataggcgcaa cggctgccca gttcgcggta aacctgaatc aaatcctgaa ccgcgctgac
    22081 tttgcacgac aggatgattt tgtcttcggg cagtcccaat agaacggctt tttcggcaga
    22141 ttccaaagcg gagacaatca gtgcttcctt cgtcacttct tcgggcggtt tcggcgcgga
    22201 agaagcgagg ttggcatcca tcatacgttt ggcgaggctt tgatccaaag aaccccagtt
    22261 tacgccgatg cggacggctt tatcgttttc agcagcagtc cgaatcataa aggcaaattt
    22321 ttcatcgcct tttacgcctt tgccgacatt gccgggattg atgcggtatt tggacaatgc
    22381 tttgccgcat tcgggaaatt ccgccaacag gcgttcgccg ttgaagtgga aatcgccgat
    22441 aagtggtgtg gcatagccca tatcgtccaa gcggcggcgg atttcggcaa ctttggacgc
    22501 ggcttcgggg ctgttgacgg taatacgcac catttcggat ccggcatcgc tcaattcctt
    22561 aatctgcaat gcggtggctt ttgcatcggc agtgtcggtg ttggtcatag attggataac
    22621 gacgggtgct tctgaaccga cggtaatatg atcgatgcgg acttgatgcg tcttgcggcg
    22681 ttggagtgtg ttcatatggt ttgaatctgt ttattgaccg atgaggacgg tttgcaattc
    22741 ttccgagtag gggaaattcg cctgcaattg tgcttcatat tcgtatgccg cctgtgcgtt
    22801 gccgagggct ttggcaattt tccagcctag cagcaaatca tcggcctgaa ggacttctac
    22861 cctgctttgg tattttttaa agtagtaatc ggcatcgccc aactgcccgg ccagcatttt
    22921 ggtgcgcgcc agttctttaa atgcgggtgg gaactgcggc tgggcggcga gggaacgttt
    22981 caaataggct tccgccaatc cgaattgccc ctgttttgcg ctgcatatgc ctttattcag
    23041 gttggcaata taaggggtcg ggtaggtggg gtcggccagg gctttgtcga aatatgccat
    23101 agattcggca gggcggttga gcctgccgca caggaaccag ccgtagttgt tgttgatttc
    23161 ggcactgtcg ggtttgatgg agagggcttg ccggaaactt tcctgcgcct tgtcgttaac
    23221 tttcaggtat tgatagattt cggcacggac cagccaggca agctcgtttt tagggtccga
    23281 tttcagggcg tcttcaatac ttgccgtcgc ctgacggtag tcctgaccgc gcatatattc
    23341 cattgccaac tgggttttga tattggaaac ctgattggct ttttctgccc gcgaggggcg
    23401 gtaggaagtg ctgcacgcgc ccaaggcaag gacaagtaat aaagagattc gtttggatgg
    23461 cttaaaaggc ataattaccc ctgttgtccg attaaaatct gctgccattt ttgttggcgg
    23521 cgcgttttat cctgaacctg ccccgccaac tgtccgcagg cggcatcgat gtcgtcgccg
    23581 cgcgtttttc gtacggtaac gacaaatcct gcctgctgca aaatatcgcg gaacacacgg
    23641 atgttctcat tgctggagcg ttcgtatcca gagtttggaa agggattgaa cggaatcaga
    23701 ttgaacttgc agggaacatc tttgaccagt tcgatcagtt cgcgcgcatg ttgcgcctta
    23761 tcgtttattc cgtccaacat gacgtattcg aaagtgatga aatccctggg tgctttgact
    23821 agatagcgtt ggcatgcagc catcaattct ttcaagggat attttttgtt caacggtacg
    23881 atttggttgc ggacttcgtc attggaagcg tggagggaaa ccgccaaagc caccggcatg
    23941 acatcgcgca acctgtccat ttggggaacc atacccgaag tggaaacggt tacgcggcgg
    24001 cggctcaaac cgtagccgtg gtcgtccagc atgatgctta aggcggtaac gacattgtcg
    24061 aagttcgcca tcggctcgcc catacccatc atcactacat tggaaattac gcgttcgttt
    24121 ttcggtgtaa cacccatcgc tttgtttgcc caccacaatt gcccgatgat ttcggcagca
    24181 gtcaaattgc ggttgaagcc ctgccggccg gtcgaacaaa atgtacattc caaagcgcag
    24241 ccgacttgtg aggaaatgca gagcgtgccg cgatccgatt cggggatgaa gacggtttcc
    24301 accccgttgc ccgtaccgac atccaaaagc cattttcgag tgccgtctga agatttttga
    24361 gacatcatca gcttgggaat ttcgatgcct gcctgttcgt tcagtttatg gcgcaacgat
    24421 tttgccaaat cggtcatttc gttaaaattt tgcgcgccgg attggtgcat ccaacgcata
    24481 acctgtttgg cacggaaggg tttttcgccc atatcggcaa aatgtcgggt cagcccttga
    24541 aggtcgtagt tgagcagatt ggttttcatg tgtttgtgtt tttcttaaat taaggcttca
    24601 aataaaaaat tgcagggcag gcaagtttga tttgaagcct tttgcgacag agttttcaga
    24661 cggcatggat atatttatgc cgtctgaaga ggagttgtgc ggtgtattgt atcaacgggg
    24721 gcagatttcg gtttggctga aaaagtaggc aatttccaaa gcggcatttt ccacgctgtc
    24781 ggaaccgtgt acggcattaa tgctgaccga agtggcaaag tccgcgcgta tcgtgccttc
    24841 ggcggcttcg gaaggattag ttgcacccat cagttcgcgg tttttcagga cggcgttttc
    24901 accctctaat acctgaatca taaccggacc gccggtcata aattcaacca atccggcgta
    24961 gaaggggcgg tctttatgaa ccgcataaaa ttcttgcgcc tctttgagag taagctgctt
    25021 cattttggcg gcaacgattt tcagaccgtt ctcctcaaag cggctgtata ttttgccgat
    25081 aacatttttg ccgacggcat cgggtttgat gatggagatg gtacgttcaa tcgccatgct
    25141 atatccttat ttttacttaa gaagaatcaa atcggtattc tatcaaaaaa ataacttatc
    25201 cgcctgaagc cttgggagat agggtcaggt gcggctgttc caaataaact tcggactgca
    25261 tttcgaccat ccggctggcg gtgcgggtaa attcttcggc aaaatcgcct tccgtataga
    25321 tatggttgac atctaccgcg ccggtggcac acagtttgac ccggaaatcg tagagtacgt
    25381 caatcagcca agtcagccgc cgcgcctccg ccttttcttg cggtgagagt tgttccaaac
    25441 ctgaaataaa aaccatttca taatgttcgg ccaaatacag atagtcggac tgtgagcggg
    25501 ggccgaagca cagtgcgcgg aaatcaaacc atatggcacg gccggactcg gctttgtggg
    25561 gaatctcccg accatggatg gtgctgatgc cggggttcaa atcggtaatg cctgtcattt
    25621 ctttgaacag ttttgccagt tttgcctcat tttcttcatt ggcaggcgta aagaaaatct
    25681 cggcggggcg gagggtacgc agtcggtagt cttcaccgcc gtcaacgttt aagacggtca
    25741 ggctggactc gatgagcgcg attgtgggaa gaaaactgct ccggttttga ccttgcgggt
    25801 agagttcgga aggcgcgtag tttgaagtcg ccaccaaaac aacgccctcg ttaagcaggt
    25861 tttccagcag acggcctaaa atcattgcat ccgcaatatc gctgacatga aattcgtcaa
    25921 aacataatac gcgggtttct ttggcaatct cggcggcaac ggatttcaac gggttgcttt
    25981 cgcttttcag ggttttcagc ctctggtgga tttctgccat aaaggcatga aagtggacgc
    26041 ggcgtttgcg gcggtaaggg aggcagccga aaaaagcgtc catcagaaag cttttgccgc
    26101 gtccgacccc gccatagaaa taaagccctt tggggacttg cggggaacgc aaactcctgc
    26161 ctaaaaaacg gtttcttttg cgtttgaaca tcatcaattc ggtccaaagc cgatcgaggt
    26221 gttcgatggc ggctgcctgc gcgtcgtcgc ggatgaagtt gggcagttgt gaggcagcct
    26281 gataccaggt cagcgggctg tggttttcaa acggcggggc tttaaaaagt tggtctctat
    26341 tactcatatt taaccttgtt atacttcttg cggcggagaa agaaaatgct taccgtcggt
    26401 attataaatg atttccttca aacttggcat tttccgtgga aaagaataat gacgcgcaca
    26461 agggggtata agcaaaggcg gcgtttcaat atggtgcaga tatgagctca aatgcctttt
    26521 atagt
//
LOCUS       DAXHKG010000010        26280 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.010, whole genome shotgun sequence.
ACCESSION   DAXHKG010000010 DAXHKG010000000
VERSION     DAXHKG010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26280
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.010"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            182..538
                     /locus_tag="ACFMWP_000335"
     CDS             182..538
                     /locus_tag="ACFMWP_000335"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HFC5890998.1"
                     /translation="MLSAYFPVFVFILVGLAASVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            529..1011
                     /locus_tag="ACFMWP_000336"
     CDS             529..1011
                     /locus_tag="ACFMWP_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HFC5890999.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1024..1617
                     /locus_tag="ACFMWP_000337"
     CDS             1024..1617
                     /locus_tag="ACFMWP_000337"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HFC5891000.1"
                     /translation="MASIQNLYETVSRVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEELHFELLVDLCGVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1607..2863
                     /gene="nuoD"
                     /locus_tag="ACFMWP_000338"
     CDS             1607..2863
                     /gene="nuoD"
                     /locus_tag="ACFMWP_000338"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HFC5891001.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2863..3336
                     /gene="nuoE"
                     /locus_tag="ACFMWP_000339"
     CDS             2863..3336
                     /gene="nuoE"
                     /locus_tag="ACFMWP_000339"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HFC5891002.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            3726..5027
                     /gene="nuoF"
                     /locus_tag="ACFMWP_000340"
     CDS             3726..5027
                     /gene="nuoF"
                     /locus_tag="ACFMWP_000340"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HFC5891003.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEIKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5027..5464
                     /locus_tag="ACFMWP_000341"
     CDS             5027..5464
                     /locus_tag="ACFMWP_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891004.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            5754..8015
                     /gene="nuoG"
                     /locus_tag="ACFMWP_000342"
     CDS             5754..8015
                     /gene="nuoG"
                     /locus_tag="ACFMWP_000342"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HFC5891005.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIIQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAN
                     GLGVKNFATRLRQQDKRLSDDLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLSQEAAHPDEWAGRLKKLSGNAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANAPKQAVLLLNVEPEIDTADGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPLWKVLRVLGNLFDLQGFEYHDTAAI
                     LKDALDAESLPSKLDNRVSSTQKDFQTASSRLVRVGGVGIYHTDAIVRRSAPLQATVH
                     AAVPAARVNPNTLARLSLQDGQIAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8018..9094
                     /gene="nuoH"
                     /locus_tag="ACFMWP_000343"
     CDS             8018..9094
                     /gene="nuoH"
                     /locus_tag="ACFMWP_000343"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HFC5891006.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            9175..9654
                     /gene="nuoI"
                     /locus_tag="ACFMWP_000344"
     CDS             9175..9654
                     /gene="nuoI"
                     /locus_tag="ACFMWP_000344"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HFC5891007.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            9666..10337
                     /locus_tag="ACFMWP_000345"
     CDS             9666..10337
                     /locus_tag="ACFMWP_000345"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HFC5891008.1"
                     /translation="MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTVNPKRMEPADQVKVRADQGRMRLVKMEAVKPQTESAEESEVSDDLKPK
                     EEGKA"
     gene            10334..10639
                     /gene="nuoK"
                     /locus_tag="ACFMWP_000346"
     CDS             10334..10639
                     /gene="nuoK"
                     /locus_tag="ACFMWP_000346"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HFC5891009.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            10673..11248
                     /gene="fic"
                     /locus_tag="ACFMWP_000347"
     CDS             10673..11248
                     /gene="fic"
                     /locus_tag="ACFMWP_000347"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HFC5891010.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            11372..11713
                     /locus_tag="ACFMWP_000348"
     CDS             11372..11713
                     /locus_tag="ACFMWP_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891011.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVSPK"
     gene            11762..13786
                     /gene="nuoL"
                     /locus_tag="ACFMWP_000349"
     CDS             11762..13786
                     /gene="nuoL"
                     /locus_tag="ACFMWP_000349"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HFC5891012.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKIGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQTATIQ
                     LFPSVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMMIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPVTWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYVAI
                     EPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQAFRPIYVLFESKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGVIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            13875..15371
                     /locus_tag="ACFMWP_000350"
     CDS             13875..15371
                     /locus_tag="ACFMWP_000350"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HFC5891013.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFAILAILAVVVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            15381..16826
                     /gene="nuoN"
                     /locus_tag="ACFMWP_000351"
     CDS             15381..16826
                     /gene="nuoN"
                     /locus_tag="ACFMWP_000351"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HFC5891014.1"
                     /translation="MNWSDLNLMPAMPEIVLLALLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKVAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRAHPTVGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            16938..17237
                     /locus_tag="ACFMWP_000352"
     CDS             16938..17237
                     /locus_tag="ACFMWP_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HFC5891015.1"
                     /translation="MTASMYILLLLALIFANAPFLTTRLFGIVPLKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(17346..18242)
                     /locus_tag="ACFMWP_000353"
     CDS             complement(17346..18242)
                     /locus_tag="ACFMWP_000353"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC5891016.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEANALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSRGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGATACPDLSDAELSVLDAYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(18226..18534)
                     /locus_tag="ACFMWP_000354"
     CDS             complement(18226..18534)
                     /locus_tag="ACFMWP_000354"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HFC5891017.1"
                     /translation="MPSEILLFQTASGFQKCYNSVFTETPDTMKKITPKSFEEALSRL
                     ESLTQSMQGEMPLEDALAAYQEGNELVRYCQTKLAQVEQKLQVLDADGPKELNLESDE
                     "
     gene            complement(18561..19484)
                     /gene="rsgA"
                     /locus_tag="ACFMWP_000355"
     CDS             complement(18561..19484)
                     /gene="rsgA"
                     /locus_tag="ACFMWP_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HFC5891018.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSMRLLQRALLAAEAAGIEAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENADLLRPVLQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETGAASPERLAFLQGITDELPG"
     gene            complement(19489..21345)
                     /locus_tag="ACFMWP_000356"
     CDS             complement(19489..21345)
                     /locus_tag="ACFMWP_000356"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC5891019.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALIFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPRALPLNVPQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMNGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(21371..21508)
                     /locus_tag="ACFMWP_000357"
     CDS             complement(21371..21508)
                     /locus_tag="ACFMWP_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891020.1"
                     /translation="MPSEGGATFALTKPCVSASRCLPDGFSRKMALLSFLSDGIMFDA
                     V"
     gene            complement(21508..22092)
                     /gene="ruvA"
                     /locus_tag="ACFMWP_000358"
     CDS             complement(21508..22092)
                     /gene="ruvA"
                     /locus_tag="ACFMWP_000358"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HFC5891021.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVSGIGAKTALGILSAMTADELAQAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHAVTDGLFAAAPAADETEDIVGTLLA
                     LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(22174..22500)
                     /locus_tag="ACFMWP_000359"
     CDS             complement(22174..22500)
                     /locus_tag="ACFMWP_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC5891022.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(22554..23273)
                     /locus_tag="ACFMWP_000360"
     CDS             complement(22554..23273)
                     /locus_tag="ACFMWP_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HFC5891023.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGKSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAASTSSPNLAIEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVQTVLTAG"
     gene            complement(23270..23392)
                     /locus_tag="ACFMWP_000361"
     CDS             complement(23270..23392)
                     /locus_tag="ACFMWP_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC5891024.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(23403..23867)
                     /gene="trmL"
                     /locus_tag="ACFMWP_000362"
     CDS             complement(23403..23867)
                     /gene="trmL"
                     /locus_tag="ACFMWP_000362"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HFC5891025.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVYENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(23932..24657)
                     /locus_tag="ACFMWP_000363"
     CDS             complement(23932..24657)
                     /locus_tag="ACFMWP_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC5891026.1"
                     /translation="MDFLSRWRRIADAPTIRRCVLCHGSSGVSDGICAGCRDDLAAYR
                     TDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIHALKHLADLSM
                     VQPLADLMMQNPPDRLADECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGSERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            24656..25399
                     /gene="bioH"
                     /locus_tag="ACFMWP_000364"
     CDS             24656..25399
                     /gene="bioH"
                     /locus_tag="ACFMWP_000364"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HFC5891027.1"
                     /translation="MPDAVKKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTAAEDYPEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLAR
                     CGTPSALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRL
                     VVMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            25401..26189
                     /locus_tag="ACFMWP_000365"
     CDS             25401..26189
                     /locus_tag="ACFMWP_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC5891028.1"
                     /translation="MNPQDKCWQVHRHLAEYADQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAARKGGFWQRFTGKGVVQHCQSPIAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWACALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAA
                     RSCVGTIFEREGGLGITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         5683 a         6699 c         7394 g         6504 t
ORIGIN      
        1 cgaattacgg tgtaaaaatt tatatgacct tataaaatca aataagaatc gttatcataa
       61 catgattgta tttattgggt ttttttgggc gttttgccga tatttacctt ttaatggttt
      121 ttgaaattcg ctaaaatacg aaattattgt agaaattttg ttaacggatt tgggtgtaac
      181 catgttgtcc gcttactttc ccgtctttgt ctttatcctc gtcggcctcg cggccagcgt
      241 gctgtttatc ctgctcggca cgattttagg cccgaaacgc cactacgccg aaaaagacgc
      301 gccttacgaa tgcggttttg aagcctttga aaacgccagg atgaagttcg acgtgcgcta
      361 ttacctcgtc gccatcctct ttatcttgtt tgatttggag gtcgcgttca tgttgccgtg
      421 ggcagtcgtg ttcaaagatt tgggcgcgta cggcttctgg tctatgctgg tgtttatcgt
      481 cgttctgacg gtaggctttg tttacgaatg gaaaaaaggt gcgctggaat gggaatagaa
      541 ggcgttttga aaaaaggttt catcaccacc agcgcggata cggtgttgaa ctatatgcgt
      601 accggttcgt tgtggccggt tactttcggc ttggcctgct gcgccgtgga aatgatgcac
      661 gcgggtatgg cgcgttatga ccttgaccgt ttcggcatca ttttccgtcc gtccccacgt
      721 caggccgacc tgatgattgt ggcgggtacg ctgaccaaca aaatggcacc cgccctgcgc
      781 cgcgtgtatg accagctcgc cgagccgcgc tgggtattgt ctatgggctc gtgtgccaac
      841 ggcggcggct attatcacta ttcttattcc gttgtgcgcg gtgccgaccg cgtcgtgccg
      901 gtagacgttt atgtgccggg ttgtccgccg actgcggaag ccctgattta cggcctgatt
      961 cagctccaac aaaaaatcaa gcgcacttcc accatcgcgc gtgacgagta agaggaggaa
     1021 gatatggcaa gcattcaaaa cttatacgaa accgtcagcc gcgttttggg caatcaggca
     1081 ggcaaagtca tttcagcttt gggcgagatt accgtcgagt gtctgcccga acactatatt
     1141 tcagtcatga ccgcattgcg cgatcatgaa gagctgcatt tcgagcttct ggtcgatttg
     1201 tgcggtgtcg attacagcac ttacaaaaac gaagcatggc agggcaaacg ctttgccgtc
     1261 gtcagtcagc tgctttccgt taaaaacaat caacgcatcc gcgtacgcgt ctgggtttca
     1321 gacgacgact tccccgtagt tgaatccgta gtcgatattt acaacagcgc ggattggtac
     1381 gaacgcgaag ccttcgattt gtacggcatc atgttcaaca accacccgga cttgcgccgc
     1441 atcctgaccg attacggctt tgtcggacat ccgttccgca aagacttccc gatttccggc
     1501 tatgtggaaa tgcgttacga cgaagagcaa aaacgcgtga tttaccaacc cgttaccatc
     1561 gagccgcgcg agatcacgcc gcgtatcgtc cgtgaggaga actacggtgg ccaataaatt
     1621 aagaaactac accatcaact tcggcccgca acaccctgcg gcgcacggcg tattgcgtat
     1681 gattttggag ttggagggcg aaaccatcgt ccgtgccgat ccgcacatcg gcctcctgca
     1741 ccgaggtact gaaaaactgg cggaaaccaa aacctatctg caagccctgc cctatatgga
     1801 tcgcttggac tatgtttcca tgatggtcaa cgagcaggcg tattgcttgg cagtagaaaa
     1861 acttgccggt atcgatgtac ctatccgcgc ccaatatatc cgcgtgatgt ttgccgaagt
     1921 aacgcgcatc ctcaatcact tgatgggcat cggttcgcac gccttcgaca tcggcgcgat
     1981 gaccgccatc ctttacgcct tccgcgaccg cgaagagctg atggacttgt acgaagccgt
     2041 gtccggcgca cgtatgcacg cagcctactt ccgtcccggc ggcgtttacc gcgacctgcc
     2101 cgacttcatg cccaaatacg agagcagcaa attccgcaat gccaaagtat tgaagcagct
     2161 caacgaatcc cgtgaaggca ctatgctcga ctttatcgac gccttctgcg agcgtttccc
     2221 gaaaaacatc gacacactcg aaaccctctt gaccgacaac cgtatttgga aacagcgtac
     2281 cgtcggcatc ggcgtcgtct cccccgaacg tgccatgcaa aaaggcttta ccggcgtgat
     2341 gttgcgcggt tcgggcgtgg aatgggacgt gcgtaagaca cagccttacg aagtgtacga
     2401 caaaatggat ttcgacatcc ctgtcggcgt gaacggcgac tgctacgacc gctacctctg
     2461 ccgtatggaa gaaatgcgtc aatccgtacg catcatcaaa caatgttccg agtggttgcg
     2521 tgtcaatccg ggtccggtca ttaccacaaa ccacaaattc gctccgccca aacgtaccga
     2581 aatgaaaaca ggtatggaag acctgattca ccatttcaaa ctctttaccg agggtatgca
     2641 cgttcccgag ggcgagacct acaccgctgt cgaacatccg aaaggcgagt tcggcgttta
     2701 catcatttca gacggcgcaa acaaacccta ccgcctgaaa atccgcgcac ccggcttcgc
     2761 ccatctgcaa ggcatggacg aaatggcaaa aggccacatg ctcgccgacg tcgttgccat
     2821 catcggtacg caggacatcg tattcgggga ggttgaccga taatgttatc cgcagagtcc
     2881 ttaaaacaaa tcgacacaga actggcgaaa tatcccgccg accaacgccg ttccgccatc
     2941 atgggtgcgt tgcgtatcgc ccaaaccgaa aaaggctggc tcgcccccga aaccatcgct
     3001 tttgttgccg actatatcgg catcacgcct gcacaagcct acgaagtcgc cactttctac
     3061 aatatgtacg accttgagcc tgtcggcaaa tacaaactga ccgtttgtac caacctgccc
     3121 tgcgccctgc gcggcggtat ggctaccggc gaatacctca aacaaaaact cggtatcggc
     3181 tacggcgaaa ctacccctga cggcaagttt acccttgtcg aaggcgaatg catgggcgca
     3241 tgcggtgatg cccccgttat gctggtcaac aaccacagca tgtgcagctt tatgaccgaa
     3301 gaagcgattg agaagaaact ggcggagttg gagtaggtcg tctgaaacga cgatttaaac
     3361 gtaggtcgga tacttgtatc cgacagagtg ggtaaaaagg caaaatgtcg gatttaagaa
     3421 tccgccctac tgaaataccg aaatgccgtc attcccgcgc aggcgggaat ccaccggtaa
     3481 gattcggttt ctgaatttaa taagacattg cttaccattg aggatggatt ctcgcctgcg
     3541 cgggaatgac gacagacaag caagtggtcg agatccaaca aaaacgatta aaggtcgtct
     3601 gaaaatatcg atttgataaa ctagatttta tttcagacga cgttacaagc cggtacacaa
     3661 agacatctta aggtcgtctg aaacagcggc cgcaaccgat acgaaaacaa acaggcacac
     3721 caaaaatggc tatttaccaa tcaggcgtga tttttgacca agtggatacc gccaatcccg
     3781 attgctggac attggacgaa tacgtcaaac gtggcggtta taccgccctg cgtaaaatcc
     3841 tgtccgaaaa catctcgcaa accgatgtga ttgacgaaat caaaacctcc ggcttgcgcg
     3901 gtcgtggcgg tgcgggcttc ccgaccggtt tgaaatggag ctttatgccc cgttctttcc
     3961 ccggcgaaaa gtacgtcgtt tgcaacaccg acgaaggcga gccgggtaca tttaaagacc
     4021 gcgacattat tatgttcaac ccccatgccc tgattgaagg catgattatc gccggttacg
     4081 cgatgggcgc gaaagccggt tacaactata tccacggcga aatttttgaa ggctaccaac
     4141 gctttgaggc cgctttggag caggcgcgtg ccgcaggctt tttgggtaaa aatattttgg
     4201 gttcggattt tgaattcgaa ctcttcgccc accacggcta cggtgcatac atctgcggcg
     4261 aagaaaccgc attgcttgaa tcgctggaag gcaaaaaagg ccagccgcgc tttaaaccgc
     4321 cattccctgc ttcgttcggc ctgtacggca aaccgactac catcaacaat accgaaactt
     4381 tctcctccgt ttcattcatt atccgtgacg gcggacaggc atttgccgat aaaggtattc
     4441 cgaatgcagg cggtaccaaa ttattctgta tttccggcca tgtcgagcgt ccgggcaact
     4501 atgaagtgcc attgggcaca ccgtttgccg aagtcttgaa aatggcaggc ggtatgcgcg
     4561 gcggcaaaaa actcaaagcc gtcattcccg gcggttcgtc cgcgcccgta ttgcctgccg
     4621 acatcatgat gcagacaaat atggactacg actcgatttc caaagcaggc tcgatgctgg
     4681 gttctggcgc gattatcgtc atggacgaag acgtgtgcat ggtgaaagcc cttgagcgcc
     4741 tgagctactt ctactacgac gagtcttgcg gccaatgtac gccttgccga gaaggcaccg
     4801 gctggcttta ccgcatcgtc caccgcatcg tagaaggcaa aggtaaaatg gaagatttgg
     4861 atttgctgga ttctgtcggc aaccaaatgg caggccgcac catctgcgcc cttgccgatg
     4921 ccgccgtctt ccccgtccga agctttacca agcatttccg tgatgagttt gtgcattaca
     4981 tcgaacacgg cggaccgatg aaagagcata agtggggagg gtggtaatgg tggaagctaa
     5041 aatttttatt ctatacggtg cagccaacaa aggtaagagt acgacactca atacgctttt
     5101 taatcagatt tgtcggaaat tttctaaatt tctagtcttt tttgaaagac atggaaacgg
     5161 cttagatttt gttgcagtat ttgatcatga aggtcagagg attggttttt attcatctgg
     5221 tgataatgaa tacgaggtta ggagaaattt atacaaactt tattcgcata attgtgattt
     5281 tatttttggc acgtcaagga cacggggtgg tagttgcgat gcagtaggat gttatgcaga
     5341 gttattgcat ggcgatgtaa atataattaa ttggtgtgaa aagtttgagc ctacagatga
     5401 agacaatgag cgtgctgtta aagagttatt taagtcattt aaaaatataa taaataagtt
     5461 atagttttag ttggttttat attggttaaa agcaaaatgc taaaaattta actttgccgt
     5521 cattcccgcg taggcgggaa tccatagtgg aatttacaga acccgatatt tgaaaagcag
     5581 ttaccgaaaa cccaagaatg gattcccgcc tacgcgggaa tgacggcaag gtggcagtaa
     5641 acgttttaaa cagtattgat tgtcaatgaa actcaaaagg ccgtctgaaa cccatttttc
     5701 agacgatctc cataaaaaat tatttatcaa atacccgtaa ctaggaacga accatgttac
     5761 aaatcgaaat cgacggcaaa caagtatctg tggagcaggg cgcgacggtg attgaagccg
     5821 cgcacaagct cggtacttat attccgcatt tctgttacca caaaaaactt tccatcgccg
     5881 ccaactgccg tatgtgtctg gtgaacgtag aaaaagcccc aaaacccctg cctgcctgtg
     5941 ccacgccggt tacagacggc atgattgtgc gtacgcattc ggcaaaagcc cgagaggcgc
     6001 aggaaggcgt gatggagttc ctgctcatca accatccgct tgattgtccg acctgcgacc
     6061 aaggcgggga atgccagttg caggatttgg cggtgggcta cggaaaaacc accagccgct
     6121 acaccgaaga aaaacgttcc gtcgtcggca aagacatggg gcctttggtt tccgccgagg
     6181 aaatgagccg ctgtatccac tgcacccgct gcgttcgttt cactgaagaa atcgccggtt
     6241 tgcaagaaat tgcgatggtg aatcgcggcg aacactccga aatcatgccc tttatcggca
     6301 aaacggtgga aaccgagctg tcgggcaacg tcatcgattt gtgtcctgtc ggcgcattga
     6361 ccagcaaacc gttccgcttc aacgcgcgta cttgggaatt gaaccgccgc aaatccgttt
     6421 ccgcccatga cgctttgggc agcaacctga ttatacaaac caaagaccat accgtccgcc
     6481 gcgtgttgcc gctggaaaac gaagcgatta acgaatgttg gctgtctgac cgcgaccgtt
     6541 tcgcctacga aggcctgtat cacgaaagcc gtctgaaaaa cccgaaaatc aaacagggcg
     6601 gcgagtggat ggacgtggat tggaaaaccg cgttggaata tgtccgcagc gcgattgaat
     6661 gtatcgccaa agacggcaac caaaaccaag tcggcatttg ggccaatccg atgaatacgg
     6721 ttgaagagct gtatctggcc aaaaagcttg ccaatggttt gggtgttaaa aactttgcca
     6781 cccgtttgcg ccaacaagac aaacgtcttt cagacgacct taaaggtgca caatggttgg
     6841 gacaaagcat tgaatctttg gctgacaacg atgccgtatt ggtagtcggc gcgaacttgc
     6901 gcaaagaaca gccgctcctg accgcccgcc tgcgccgcgc cgccaaagac cgtatggcct
     6961 tgagcgtatt ggccggcagt aaagaagaat tgtttatgcc gcttctgtct caagaagccg
     7021 cacatcccga cgaatgggca ggccgtctga aaaaactgtc tggcaatgcg gaacacgcag
     7081 ttaccgccag cctgaaaaac gctgaaaaag cagcggtgat tttgggtgcg gaagtgcaaa
     7141 accatcctga ttacgccgcg atttatgccg ccgctcaaga gctggcagat gcgaccggcg
     7201 cagtgctggg tattttgccg caagccgcca acagcgttgg tgcggatgtc ttgggcgtga
     7261 actcgggcga gagcgttgcc gaaatggcaa acgcgccgaa acaggcggtc ttgctactca
     7321 acgtcgaacc ggaaatcgat acggcggacg gtgcgaaagc cgtggccgcg ttgaaacagg
     7381 cgaaaagcgt gatggcgttt acaccgtttg tcagcgaaac gctgctggat gtgtgcgacg
     7441 tgttgttgcc gattgcgccg tttaccgaaa catcgggcag cttcatcaat atggaaggcc
     7501 gtctgcaatc ctttcacggc gtggtacaag gcttcggcga ctcgcgtccg ctgtggaaag
     7561 tgttgcgcgt attgggcaac ctgtttgacc tgcaaggttt tgaataccac gataccgccg
     7621 cgattctgaa agacgcgctg gacgcggaaa gcctgccgtc caaactggac aaccgcgtgt
     7681 cttcgactca aaaagatttt cagacggcat caagccgcct cgtgcgcgtg ggcggagtgg
     7741 gcatctatca caccgatgcc atcgtgcgcc gttccgcacc gttgcaggca accgtccatg
     7801 ccgccgtgcc tgccgcgcgt gtgaatccaa acacattggc acgcttgagc ctgcaagacg
     7861 gacaaattgc tgtcgccaaa caaaacggcg caagcgtatc ggttgctgtc aaagccgatg
     7921 ccggtttgcc tgaaaacgtg gtgcatctgc cgctgcatac cgaaaatgcc gcgctgggtg
     7981 cgttgatgga cactattgaa ctggcgggag cttgatcatg caagaatggt tccaaaacct
     8041 ctttgccgca acgctcggtc tgggcgattt gggtatcacc gtgggcttgg tggtatccgt
     8101 catcgtcaaa atcgtgatta tcctgattcc gctgattctg accgtcgcct acctgactta
     8161 tttcgaacgt aaagtcatcg gcttcatgca gcttcgcgtc ggcccgaacg taaccggccc
     8221 gtggggcctg atccagccgt ttgccgatgt gttcaaactc ttgtttaaag aggtaacccg
     8281 tccgaagctg tcaaacaaag ccctgttcta catcggcccg attatgtcgc ttgctccgtc
     8341 tttcgcggca tgggcagtga ttccgttcaa cgaagaatgg gtgctgacca acatcaatat
     8401 cggtcttttg tacattctga tgattacctc gctgtcggtt tacggcgtaa tcatcgcggg
     8461 ctgggcttcc aactccaaat attcgttctt gggtgcaatg cgtgcttccg cacaaagcat
     8521 ttcctacgag attgccatga gtgccgcgct ggtgtgtgtc gtgatggtgt cgggcagcat
     8581 gaacttctcc gacatcgttg ccgcgcaggc aaaaggtatc gcgggcggtt ccgtattctc
     8641 gtggaactgg ctgccgctgt tcccaatctt catcgtctat ctgatttccg ccgttgccga
     8701 aaccaaccgc gcaccgtttg acgtggcaga gggcgagtcc gaaatcgttg ccggacacca
     8761 cgttgaatat tccggcttcg cattcgcgct gttcttcctt gccgaataca ttttcatgat
     8821 tctgattgcc gcgctgacat cgctgatgtt tctcggcggc tggttgtctc cgttcccgca
     8881 aagctggggc tttatcggta cgccttccgc attctggatg tttgtgaaaa tggcggcagt
     8941 gttgtactgg tacctgtgga tccgtgcaac cttcccgcgc taccgttacg accaaatcat
     9001 gcgtttgggc tggaaagtgc tgattccgat cggcttcgcc tacatcgtga ttttgggcgt
     9061 gtggatgatt tcaccgctga atttgtggaa ataagtttca gacggcatct tgaggccgtc
     9121 tgaacaaagc gattttgaat acctaacgaa atccctgttt tgagggaaca taatatggct
     9181 aacttagtaa aaacctttct gctcggcgag ttggtaaaag gcatgggcgt aacgctcaaa
     9241 aacttttttg cccgcaaaga cacaatttat ttccccgaag agaaaacgcc gcaatccgtg
     9301 cgtttccgtg gcctgcacgc gcagcggcgg tatccgaacg gcgaagagcg ctgtatcgcg
     9361 tgtaaattgt gcgaggcagt ttgtccggca atggcgatta acattgaatc ggaagaacgc
     9421 gaagacggca cccgccgcac caagcgttac gatatcgacc tgaccaagtg catcttctgc
     9481 ggtttctgcg aagaggcctg cccgaccgat gcgattgtgg aaacgcatat ttttgaatac
     9541 cacggcgaga aaaaaggcga cttgcacatg accaagccga tcctcttggc aatcggcgac
     9601 aaatacgaag ctgaaatcgc caaacgcaaa gccgctgatg cgccgtatcg ttaaggagca
     9661 gacgaatgac tttttccgcg attctgttct atatccttgc cgccatcgtc ctatacggcg
     9721 cgctgcgtac cgttacagcg aaaaaccctg tccacgccgc tttgcatctg gtgttgacct
     9781 tctgcgtgag cgcgatgctt tggatgctga tgcaggctga gtttttgggc gtgacgctgg
     9841 tggtggttta cgtcggcgcc gtgatggtgt tgttcctgtt cgtcgtgatg atgttgaaca
     9901 tcgacattga agaaatgcgt gccggtttct ggcggcacgc gcctgttgcc ggtgtggtcg
     9961 gcacattgtt ggcagttgcc ctgattctga ttctggtcaa tccgaaaacc gaccttgccg
    10021 catttgggct gatgaaagac attcccgccg attacaacaa tatccgcgat ttgggcagcc
    10081 gtatttatac cgattatctg ctgccgtttg aattggcggc ggtattgctg ctgttgggta
    10141 tggtggccgc gattgcgctg gttcaccgta aaacggttaa tccgaaacgt atggaacctg
    10201 ccgaccaagt taaagtacgc gccgaccaag gccgtatgcg cttggtgaaa atggaagccg
    10261 tgaaaccgca aaccgaatct gccgaagaaa gcgaagtttc agacgacctc aagccgaaag
    10321 aggagggcaa agcatgatta ccttgacgca ttatctggta ttgggtgcgc tcctgttcgg
    10381 tatcagcgcg atgggtatct tcatgaaccg caaaaacgtg ctggtattgt tgatgtccat
    10441 tgagctgatg cttttggcgg tgaacttcaa ctttatcgcc ttttcgcaac atttgggcga
    10501 tactgccgga caaattttcg tatttttcgt actgaccgtt gctgctgccg aatctgccat
    10561 cggtttggca attatggtgc tggtgtaccg caaccgacaa acgattaacg ttgccgattt
    10621 ggacgagttg aaagggtaaa ggtaggttgg gtcgagacct gacaagacac cgatgccgtc
    10681 tgaaaacccg ataggaaaaa cgatgaaatc catagacgaa caaagcctgc ataatgcccg
    10741 ccgcctgttt gaaagcggcg acatcgaccg tatcgaagtc ggtaccaccg cgggcctgca
    10801 acagattcac cgttacctgt tcggcggctt atatgatttt gcgggtcaaa tcagggaaga
    10861 caacatttcc aaaggcggtt ttcgttttgc caacgccatg tatttaaaag aggctttggt
    10921 taaaatcgag cagatgcccg agcggacttt tgaagaaatc atcgccaaat atgttgaaat
    10981 gaacattgcc catccgtttt tggagggtaa tggcagaagt acccgcatct ggctggattt
    11041 ggtgctgaaa aaaaacctga aaaaagtcgt gaactggcaa aatgtaagta aaaccctgta
    11101 tttgcaggca atggaacgca gccccgtcaa cgatttagaa ctgcgctttc tgttaaagga
    11161 caacctgact gacgatgtgg acaaccgtga aatcatcttt aaaggtatcg agcagtcgta
    11221 ttattacgaa gggtatgaaa aaggctgagg gtcgtctgaa aagcgatttc agactgtttc
    11281 agacgacctg attcggtagg tgatcagacg ggagcggatg agaaaagaaa ttctgggtaa
    11341 gaataatccg gtctgaaata ttggaagaag aatgatggat aaaaatcagt tagaacaaga
    11401 atttcataaa gccatgttaa atatttatca ggaggctttg aatttgccgc aaccttacaa
    11461 ggcgacacga tttttacaaa ttgtaaatga atttggtggt aaagaggcgg cggataaatt
    11521 attaagtacg ggggaaaaga agactcagac cggttttaca gagctgattt tgagtggtgg
    11581 cggagtccac gccttgaaat acagtatgga atatctggtg ttacaaaagc cgtggtgtga
    11641 tttatttact gaagagcaat tagctgtggc acgcaaacga ttggagcgtg ttggatttgt
    11701 ttctccgaag taattttgta cgaaacaaac atagattttt aaatcaatcg gattcaatca
    11761 aatgaacgac atgactttat atctcatcat tgcccttgtg cctttggcag gctcgctgat
    11821 cgcgggtttg ttcggcaaca aaatcggacg tgccggtgcg catacggtta cgatactcgg
    11881 cgtggcggtg tccgccgtgc tgtcggctta tgtgttgtgg ggctttattg acggcagccg
    11941 cgccaagttt gacgaaaacg tctatacctg gctgacaatg ggcggcttgg atttctccgt
    12001 cggctttttg gtcgatacga tgacggcgat gatgatggtc gtggtcaccg gcgtatcgct
    12061 gatggtacat atctatacca tcggttatat gcacgatgaa aaaatcggct accaacgctt
    12121 cttcagctat atttctttgt ttactttcag catgttgatg ctgattatga gcaacaactt
    12181 catccagctc ttcttcggtt gggaagcggt gggcttggtg tcgtatctct tgatcggttt
    12241 ctatttcaaa cgtccgagcg cgacatttgc caacctgaaa gcctttttga tcaaccgtgt
    12301 cggcgacttc ggctttttgc tcggtatcgg cttggtgctt gcctatttcg gcggcagcct
    12361 gcgctatcaa gatgtattcg cttatctgcc taatgttcag acggccacca ttcaattgtt
    12421 ccccagtgtg gaatggtctt tgattactgt aacctgtttg ctcctgtttg tcggtgcgat
    12481 gggtaaatcg gcacaattcc cgctgcacgt ctggctgcct gattcgatgg aaggcccgac
    12541 cccgatttct gcattgattc acgccgcaac catggttacc gccggtctgt ttatggtatc
    12601 gcgtatgtcg ccgatttatg agatgagtag cactgcgctg tctgtcatca tgatgattgg
    12661 tgcgattacc gccctgttta tgggtttctt gggcgtgatt caaaacgata tcaagcgcgt
    12721 ggttgcgtat tccaccctgt cgcaactggg ctatatgacc gtggctttgg gcgcgtccgc
    12781 ctattccgtg gcgatgttcc acgtcatgac ccacgccttc tttaaagcct tgctgttctt
    12841 ggcggcaggt agcgcgatta tcggtatgca ccacgaccaa gatatgcgcc atatgggcaa
    12901 cctgaaaaaa tatatgccgg ttacttggct gactatgctg atcggcaatt tgtcgctgat
    12961 cggtacgccg ttcttctccg gcttctattc taaagattcg attatcgaag cagcgaaata
    13021 cagcaccctg ccgggcagcg gctttgctta ttttgccgtc cttgccagcg tgttcgttac
    13081 cgcgttttac gcgttccgcc aatactttat ggtgttccac ggcgaagaga aatggcgcag
    13141 cctgcctgaa catcatgacg atcatcatgg tgaagaacat cacggcttgg gcaaaaacga
    13201 caatccgcac gaaagcccgc tggttgttac cctgccgctg attttgcttg ccatcccgtc
    13261 cgtcatcatc ggctatgttg ccatcgagcc tatgctttac ggcgatttct ttaaagacgt
    13321 gattttcgtc aataccgacg cgcatccgac catgcacatc atgaaggaag agttccacgg
    13381 cgcattggca atggtgtcgc acagcctgca ttcgcctgta ctctaccttg ctattgcagg
    13441 tgtcttaagc gcatggcttt tgtacgtcaa actgccgcac ctgcctgcga aaattgcaca
    13501 ggcgttccgt ccgatttacg ttttgtttga aagcaaatac tacctcgacg ccctgtattt
    13561 caacgttttc gccaaaggca cacgcgcatt gggtaccttc ttctggaaag tcggcgatac
    13621 cgccattatc gacaacggca tcgtcaacgg ctctgccaaa ctggtcggcg taattgccgc
    13681 gcaagtgcgt aaagcccaaa ccggctttat ctacacctac gccgccgcta tggtattcgg
    13741 cgtattggta ctgctcggca tgaccttctg gggattgttc agataaggat gaggtttcag
    13801 acggtctctt aaaacgtcgt ctgacaaacc aacccgtaca acgatatttt tattttaacc
    13861 acaggttaac cactatgttt tccaactacc tactcagctt ggcaatatgg atacccatcg
    13921 ccgcaggtgt gctggttttg tcgaccggta aggacagccg tgcgccgctg gcgcgtgtgc
    13981 tcgccttcat gggtgcgctt gccggtttct tggtaacgct gcccctgttt accggtttcg
    14041 accgtttgag cggcggctat caatttaccg agttccacga gtggattccg ctgctgaaaa
    14101 tcaactatgc attgggcgtg gacggtattt cagtgctctt tatcatcttg aatgcgttta
    14161 ttacgctgtt ggtggtgctg gcgggttggg aagttattca gaaacgcccg gcgcagtata
    14221 tggcggcatt cctgatgatg tcgggtttga ttaacggtgc gtttgccgcg caggatgcga
    14281 ttctgtttta tgtgttcttc gagggtatgc tgattccgct gtacctgatt atcggtgtat
    14341 ggggtggccc gcgccgcgtt tatgcgtcgg tcaagctgtt cctctatacg ctgatgggtt
    14401 cgcttttgat gctggttgcc atggtttacc tgtactatca gacaggcagc ttctctattg
    14461 tcgatttcca aaacatcaag cagattccat tgggcgtaca acagcttttg tttgtggcat
    14521 tcttcctgtc atttgccgta aaagtgccga tgttccctgt gcacacttgg ttgccggatg
    14581 cccacgttga agcgccgacc ggcggttcga tggtgttggc ggcaattacg ctgaaactgg
    14641 gtgcgtatgg tttcttgcgt tttatcctgc cgattatgcc ggatgcggca cgctattttg
    14701 cccctgtgat catcgtattg agcctgattg ccgtgattta tatcggtatg gtggctttgg
    14761 tgcaaaccga tatgaaaaaa ctggtggcgt attcgtctat cagccatatg ggttttgtaa
    14821 cgcttgggat gtttttgttt gttgacgggc agttggacga ctgggcgttg aaaggcgcaa
    14881 tcattcaaat gatttcgcac ggtttcgtgt cggcggcgat gtttatgtgt atcggcgtga
    14941 tgtacgaccg cctgcatacc cgcaatattg ctgactatgg cggcgtggtc aatgtgatgc
    15001 ctaagtttgc ggcgtttatg atgttgttcg gtatggccaa tgccggtctg cctgcaactt
    15061 ccggcttcgt gggcgagttt atggtgatta tgggcgcggt taaagtgaat ttctgggtgg
    15121 gcgcgttggc ggccatgacc ctgatttacg gtgcgtctta taccctgtgg atgtacaagc
    15181 gcgtgatttt cggcgcgatc cacaatccgc acgttgccga aatgaaagac atcaactgcc
    15241 gcgaatttgc gattctggcg attttggcgg ttgtggtatt gggtatgggt ctgtatccga
    15301 acgcatttat cgaagtggtg catcaggcgg caaacgattt gattgcccat gtggcacaaa
    15361 gcaagatttg aggtgtgtaa atgaactggt ctgatttgaa tttgatgccc gccatgcccg
    15421 aaatcgtgct gcttgcgctg ctggtgttat tgttgctggc ggacttgtgg gtcagtgatg
    15481 acaaacgccg gtggacgcat tacggcgcgt tggcaacggt ggcggttacg gctgtggtgc
    15541 agcttgccgt ttgggaacag ggcagcacgt cttcgttcaa cggcatgtat attgcagacg
    15601 gtatgtcgcg tttggcaaaa atggttttat atgccttgac gtttgccctg tttgtttatg
    15661 ccaagcccta caaccaagtg cgcggtattt tcaaaggcga gttttacacc ctgtcgctgt
    15721 ttgccctctt gggcatgagc gtgatggtga gcgcggggca ttttttaact gcctatatcg
    15781 gtttggaact cttgtcgctc gccctttacg ccctgattgc cctgcgccgc gattccggct
    15841 ttgccgccga agccgccttg aaatattttg ttctgggcgc gctggcatcc ggcctgctgc
    15901 tctacggtat ttctatggtt tacggcgcaa ccggttcgct ggaatttgcc ggcgtgctcg
    15961 cctcttcctt caatgaagaa gcaaacgaat ggctgttgaa actgggtctg gtgtttatcg
    16021 tcgtcgccgt tgcgttcaaa ctcggcgcgg tgccgttcca tatgtgggtg cccgacgtgt
    16081 atcacggcgc gcccacttct gttaccgccc tagtcggcac tgccccgaaa gtcgccgccg
    16141 tcgttttcgc tttccgcatc ctcgttaccg ggttgggaac cgtgcatcat gactggtctc
    16201 tgatgtttgc cctgcttgcc gccgcctcgc tgctggtcgg caaccttgcc gccatcatgc
    16261 agaccaatat caaacgtatg ctcgcctatt ccaccgtatc gcatatgggc tttatcttgt
    16321 tggcgtttat ggcaggcgcg gtcggctttg cggcgggtct ctattacgcc attacctacg
    16381 cgctgatggc ggcggcaggg ttcggcgtgt tgatggtgtt gtcggatggg gacaacgagt
    16441 gcgaaaacat cagcgatttg gcagggctga accaacaccg cgtatggctt gcctttttga
    16501 tgctgctggt tatgttctcc atggcaggca ttccgccgct gatgggtttt tacgccaaat
    16561 tcggcgtgat tatggcactc ttgaaacaag gctatgtttg gttgtccgta tttgccgtcg
    16621 tgatgtcgct gattggtgcg ttctactacc tgcgcgtggt caaagtcatg tattttgacg
    16681 aatccggccg cgcccatccc accgtcggcg gcaacaatgc cgcaaaattc cttttgagcg
    16741 tcaacgcgct gctgttggtg ctgtggggca ttatgccgca aaccgttatc gactggtgcg
    16801 ccaaggcgtt ggaaaacacg ctgtaagccg ccgcaacggc agccgtgtca gaggctgccg
    16861 tttttgttaa gatatgccgt tccgcaatgc agttcagacg gcatcgccgc cgacaatgcc
    16921 caaacagaaa gcccgccatg accgcatcca tgtacatcct tttgctgctt gccttgattt
    16981 ttgccaacgc ccccttcctc acgaccaggc tgttcggcat cgtaccgctc aagcgcaaac
    17041 atttcgggca ccacttgatc gagctggcgg caggtttcgc gctgaccgcc gttcttgcct
    17101 acatcctcga atcccgtgcg ggagcggtac acgatcaggg ttgggagttt tacgccaccg
    17161 tcgtctgcct gtacctgatt tttgcgtttc cctgtttcgt gtggcggtat ttttggcaca
    17221 cgcgcaacag ggaataggca ggcataggaa tgccgtctga aacctgttca gacggcattt
    17281 gtttcattca agtgcaggcc ggcatcgctg tgccggcacg tttcagccgg cgatatacgc
    17341 cggttttaat atttgcgggc gactgcaaat tctgccaact gccgcaggcg cagggctttg
    17401 tcgccgaagg gttcgagcag cgcgaccgct tcggcaacca gtttgtgtgc gtatgagcgc
    17461 gccgcttcca agcccatcag tttcacataa gtcggcttgt cgttgtctgc gtctttgccc
    17521 gccgttttgc ccaaagtcgc cgtgtccgct tcacaatcca acacatcgtc aatgacttgg
    17581 aacgccagcc ccagttttgc cgcgtaagcg tccaatacgg aaagttccgc atctgacaga
    17641 tcaggacacg ccgtcgcccc caataaaacc gccgcacgga ttagcgcacc cgttttcagg
    17701 ctgtgcatct gttccaaatc ggcttgaacc atttgtttgc cgacattcgc caaatcgatt
    17761 gcctgaccgc ccgccatacc cctgctgccg cccgctttcg ccaacaccga caacattgcc
    17821 aactggcgtg cggcgggcag ttctgtcgga cgacttaaca cgtcgaaggc ttgggtttgc
    17881 aaagcatcgc cggtcagcag tgcgtttgct tcgccatatt tgatgtggca ggtcggtttg
    17941 ccccggcgca ggctgtcgtt gtccatcgcc ggcatatcgt cgtgaaccaa agaatagacg
    18001 tggatcattt cgattgccgc cattgcctgt tctactgctt catgcacggc ttcgcctaat
    18061 tccgaagctg ccagaaccag catcggacgc agacgcttgc cgccgtccaa agccgcatag
    18121 cgcatcgctt cgtgcagcgt gtgcgggatt tcgttttcag acggcaaaaa gcgttccagc
    18181 agcagctctg tctgtgcctg cgccctctgt tgccacgctt tcaaatcatt cgtcggattc
    18241 aaggttcaac tccttcggcc cgtccgcatc caaaacctgt aatttctgtt cgacttgtgc
    18301 cagcttggtt tggcagtacc tgaccagctc gttgccttcc tgataggcgg caagcgcgtc
    18361 ttccaagggc atttcaccct gcatagactg cgtcagcgat tcaaggcgcg acaaggcttc
    18421 ttcaaacgat ttcggggtaa tttttttcat ggtgtcggga gtttctgtaa aaacggaatt
    18481 gtagcatttc tgaaaaccgg atgccgtctg aaacagcagg atttcagacg gcattgtttt
    18541 gtcctgcaaa cggcaaggcg ttacccgggc agttcgtcgg tgatgccctg caaaaaggcg
    18601 aggcgttcgg ggcttgccgc cccggtttcg gcggcggctt tgaaggcgca gccgggttcg
    18661 gcgcggtggg tgcagttgtg gaagcggcat tgcccgacaa ggtggcggaa atcggggaaa
    18721 tagcgcggca aatcggcggc ttggaggtgg tgtaaaccaa attcttgcaa acccggggag
    18781 tcgatgagtt gggtttcgcc gttcaaatca taaagccggg cgtgggtggt ggtgtgtttt
    18841 cccgagtcga gtgcggcgga aatgtcgccg gtgcgggcgg tttggctgcc taaaagggcg
    18901 ttggtcaggg tggatttgcc cataccgctc tgcccgagca ggatgttgct gtgcccttgc
    18961 aggacggggc gcaggaggtc ggcgttttcc agcgcacggg tttcgatgac gggataaccc
    19021 agcgtttcgt agaatttgag tttttcgcgc caaagggcgg tttcgggcag gtcggctttg
    19081 ttcaggacga tgacggcttc aataccggcg gcttcggcgg caagcagggc gcgttgcagc
    19141 agccgcatgc tcggactcgg gacggcggcg gtaacgataa ggagttgggt aacgttggcg
    19201 gcgatgagtt tggttttcca cgcgtcttgg cggtagagca ggctttggcg cggtaaaaaa
    19261 tcttcaatca caacttgttc ggcgttgacg gggctgatgc ggacacggtc gccgcaggcg
    19321 aaatcgacgc gttttttgcg cgtgctggct tcgtaggttg tgccgtcggg cgtgcgcacg
    19381 atgtagcggc ggccgtagct ggcggtaatt tgggcggtgt cgttcatggt ttctttgggg
    19441 ttgggtgtgg aaatgccgtc tgaaaacggg tgttcggacg gcatcggttc agtcgtgctg
    19501 ccactcgacg tgttcgttga ggaagccgcc gctctggtgc gcccagagtt tggcgtaaag
    19561 cccgcgtttt tcgaggagtt cggcgtgtgt gccttcttcg atgatgcggc ctttgtcgag
    19621 gacgacgagc ctgtccattg cggcgatggt ggaaaggcgg tgggcgatgg cgatgacggt
    19681 tttgccgttc atcattttgt cgaggctttc ttggatggcg gcttcgactt cggaatcgag
    19741 cgcgctggtg gcttcgtcca aaagaagaat cggtgcgtct ttgagcatca cgcgggcgat
    19801 ggcgatacgc tggcgttgac cgccggagag tttcacgccg cgttcgccga cgtgcgcgtc
    19861 atagccgcgc cgccctttgg catcggaaag ttcggggatg aagccggcgg cttcggcgcg
    19921 ttcggcggcg gaaaccattt cggcatcggt cgcgtcgggg cggccgtaaa taatgttgtc
    19981 gcgcacggaa cggtgcagca gcgaggtatc ttgcgtgacc aaaccgattt gggcgcgtaa
    20041 agattcttgg gtaacgccgc ttatgtcctg cccgtcgatc gaaaccgtgc cgctttgcgg
    20101 ttcgtagaag cgcaaaagca ggttgacgat ggtggatttg cccgcgccgc tgcgtccgat
    20161 caagccgact ttttcgcccg ggcggatggt gaggttgaag ccgttgagca gcggtttgcc
    20221 ggcttcgtag cagaaatcga tgtgttcaaa tttgattgcg ccttgcggca cgttcagcgg
    20281 cagtgcccgg ggcttgtcga ggatggtgtg cggtttggac agggttgcca tgccgtcgcc
    20341 gacggtgccg atgttttcaa acagccgcgc ggattcccac ataatgtatt gcgacaaacc
    20401 gttgacgcgc aacgccatgg cggtggctgt agcaaccgcg cccacgccga cctgcccgtt
    20461 gtgccagagc cagatgccca gtgcggcggt ggagagggtc agggaggtgt tgacgatgaa
    20521 gctgcacgaa tgcagcagcg tcgccagccg catttgggcg cgcaccgtaa ccataaattc
    20581 ttccatcgac tgcttggcat aggcggcttc acgcgcgccg tgggagaaga gtttgacggt
    20641 ggcgatattg gaataggcat cggtaatgcg gccggtcatc agcgagcggg catccgcctg
    20701 ccatgcggcg gtttgcccca atttgggaat cagcaggcgc atcaccgaag cgaaaccgac
    20761 aatccagccg ataaagggca gcagcagcca tgagtcgagc gaggcgagaa tcacgccgga
    20821 ggtaatgaaa tacaccgaca cataaacgac catatcggca accgtcatca ccgcgtcgcg
    20881 caacgccagc gcggtctgca tgactttggc ggacacgcgt ccggcaaatt cgtcctgata
    20941 aaaaccgagg ctttggttca gcatcaggcg gtggaagttc cagcgcaggc gcatggggaa
    21001 cacgccctga agggtttgca ggcgcacgtt ggacgcggca aacgcccaca cgaccgaaaa
    21061 caccatcatc gccgccattg ccgccagttc ccaacctttt tcggcaaaca attcggcggg
    21121 cgcgtatttg ccgagccact ccacgatttt gcccataaat tgaaaaatca gggcttccat
    21181 aatgccgatg ccggcggtca gcgcagccag ggcggctatc catttccgca cgccggccat
    21241 gctgctccag acaaaccgcc acaagccttt ttctggcgtt ttcggggcgg cttcgggata
    21301 agggtcgatt cgggactcga accaggaaaa gattttgttc aacattgttt tcgatttcgg
    21361 taaaacagtt tcagacggca tcaaacataa tgccgtctga aaggaaggac aataacgcca
    21421 ttttacggga aaagccgtcg ggaagacagc gcgaggcgga aacgcagggt ttcgtcaggg
    21481 caaacgtcgc gccgccttca gacggcatta tttcagcagg tttttcaaag caaggcgcac
    21541 gccttcgccc acgtccgtcc ctttcggaac gcctttgacc gccgcttttg cctcgcgttc
    21601 gctgtaaccg agggcgagga gcgtgccgac gatgtcttcc gtttcgtcgg cggcgggtgc
    21661 ggcggcaaac agcccgtccg ttaccgcatg cgcgaccagc ttgccgcgca gttccaaaac
    21721 catgcgttcg gcggtttttt tgccgattcc cggggcggag gagaggcgtt tgacatcttc
    21781 ttctgcaacc gcctgcgcca gctcgtctgc cgtcatcgcc gacaaaatgc ccaaagccgt
    21841 tttcgcgccg atgccgctga ccttaatcag ttggcggaat gttttgcgtt cttccgcagt
    21901 ggcaaaacca aataaaagat gtgcgtcttc ccgaatgata agctgggtaa acagttgtac
    21961 gctttcaccc acgggcggca ggttgtagaa ggtctgcatc gatacgtcgg cctcatagcc
    22021 gacaccgttg acatcgatga cgatttgcgg agggtttttt tcaaccagtt tgccggtcag
    22081 tctgctgatc atgtatgccg aatcctgaag tgtcgggtgc aaaatgccgt ctgaaaccgg
    22141 ttcgggcttc agacggcacg gattgtatca aattcagtcg tcgcggcggg aggaaatcac
    22201 gcggccggta cgggcatcga caacgacttt gtattcctgt ccgtttttga cgatttcgac
    22261 atcatagtgc ggacggccgt tgtcgtgttc gagatcgatg tcggtgattt tgccgccgac
    22321 acgcgccaac gctgcttttt cggcttgggc gcggctgatg attttgtctt gtttgctgtg
    22381 ttggtgtgcg gcgtgtccgt ggtcgtcatc gccgtgtccg tcgtggtggg cgagtgcggg
    22441 ggcggaaatg cccatcagtg cggttgcggc ggcggtcaag agaaggcgtt tgaagttcat
    22501 gttttgctcc tgcgaagtat ctggtggtgt ttgaaagacg taaaggcggg acatcaaccg
    22561 gcggtcaata ccgtctgaac cataccgcgc gcctgagctt cggcctcggc ggcgcgttcc
    22621 tgcgaggcaa acggacccat tttgacgacg tattcgtaac ggcgtttttc aatggcgagg
    22681 ttcgggcttg atgtcgaagc ggcgaagttt tgggcggctt ggttcagata ggcttgtgct
    22741 tcgtgttccg taccgaaaga tttcaagtcg ataaagatgt ctttgttttc ggcaaccggt
    22801 gcggatttgc ccgggacgat ttgttcgatt ttgacgtgcg ccgtcccttg gctgacaaag
    22861 cccaattttt gcgcggcggc tttggatacg tcgatgatgc ggttgccgtg gaaggggccg
    22921 cggtcgttga cgcggacgat gacgcttttg ccgtttttgg tattggttac gcgcacatag
    22981 ctggggatgg gcagggtttt gtgggcggcg gtaaaggcgt tcatatcgta tcgttctccg
    23041 ccggaagttt tgcgcccgtg aaacctgccg ccgtaccacg aggcgttgcc ggtttgcgtg
    23101 aattcggcga cttggttttt cggcgtgtag cgttttccgg cgactttgta gctgcggttg
    23161 gcggaggcgt gcagtttttc tgccttgacc actgcgtcgg cggatgccgt ctgaagggag
    23221 tgtgtgccga atgcggcggt gagaaggaaa agggtttttc gggttaaagt caaaacgtgt
    23281 tccgttcttg agttgaagac gaatgggcat catgcccgcc ggatacgttc cgaaccgccg
    23341 tacagtgcgg acggcggttc ggaatgtgtc cggataggtt ttcagacggc atgaacttgc
    23401 gttcaaacgc cgcctgcgta accgtgttgc cgccacgctt caaagagaat cacggcaacg
    23461 gtattggaaa ggttcatact ccggctgccg ggctgcatgg gcaggcggat tttttgcgcg
    23521 gcgggcaggc tgtcgaggat gtcggcaggc agtccgcgcg tttccggccc gaacagtaaa
    23581 acgtcgcctt tttgaaacgc ggtttcatcg gggcgcgccg tgcctttggt ggtcagggcg
    23641 aaaatgcgcc tgcctgcgag tgccttgagg cagtcgtcga agttttcgta caccgtcagg
    23701 ctggcgaatt cgtggtagtc gagcccggcg cgtttcattt tggcggaatc caatgggaag
    23761 ccgagcggtt tgacaaggtg caaatccgcg ccggtattgg cgcacaggcg gatgatgttg
    23821 cccgtgttcg gcgggatttc cggctggtat aaaacgatgg taaacataaa tatcaatcac
    23881 ttataggcgc gtaaccttgc cacaaggcgg atggggtgtc aaaaaattta gttatttttt
    23941 cattggcgtg cgtgccagcg tccagcagca gatgcggttc gcgcccgatt ttttcagcgt
    24001 ctttgccaat tcgtccagcg tcgcgccggt ggtaaagaca tcgtcgatta acagaatatt
    24061 acagttttcc ggtatcggtg tgcggatttc aaaggcgttt ttgatgtttc gccgccgttc
    24121 gctgcctttg agcgtgcttt gcggcgggcg gtggtgtcgg aatacggtgt gtcggggcag
    24181 tatctgccag ccgtagcgtt gtgccaacaa cccgacgatg ctttcacttt ggttgaaccc
    24241 gcgttgcagc agccgctccc tgcttagcgg tacgggcagg acgaaatcga aacattcgtc
    24301 tgcaagccgg tcgggcggat tctgcatcat caggtctgcc agcggctgca ccatgctcaa
    24361 atcagccaag tgcttcagcg cgtgtatcat attgctgacg ggcggttcgt aatgcagcga
    24421 agcccacatc cggtcgaatg cgggcggttt tttctgacag ccgccgcaca ccgcgccgcc
    24481 ttggatgtgc ctgaaacaca gggggcagct gtttgccgcg tcggtgcggt atgccgccaa
    24541 atcgtcgcgg cagccggcgc agatgccgtc tgaaacgccg gacgaaccgt ggcataatac
    24601 gcaacgcctg atagtgggcg cgtctgcgat gcgccgccaa cgagagagaa aatccatgcc
    24661 tgatgccgtc aaaaaagttt acctgataca cggttggggg gcgaaccgcc acatgttcga
    24721 cgatttgatg ccgcgcctgc ctgcaacgtg gccggtgtcc gccgtcgatt tgcccggaca
    24781 cggcgacgcg cccttcgcgc aacccttcga tattgaggca gccgccgacg ctgttgccgc
    24841 acaaatcgat acgcccgccg acattctcgg ctggtcgctc ggcggattgg tcgcgctgta
    24901 tctggcggcg cgccatcccg acaaagtccg ttcgctctgc ctgacggcga gtttcgcacg
    24961 gctgacggct gccgaagatt atcccgaagg gcttgccgcg cctgcactgg gcaaaatggt
    25021 cggcgcgttc cgttcggatt atgccaaaca tatcaaacag tttctacaac tccagcttct
    25081 gcacacgcct gatgcggacg gaatcatagg cagaatcctg cccgatttgg cacggtgcgg
    25141 cacgccctcc gccttacagg aagctttgga cgcggcggaa agggcggatg cgcggcattt
    25201 gttggacaag atagatgttc cggtactgct ggtgttcggc ggcaaagacg cgattacgcc
    25261 gccgcgtatg ggcgagtatc tgcaccggca tttgaaaggc agcaggctgg ttgtgatgga
    25321 aaaggcggca cacgcgccgt ttttgagcca tgcggaagcg tttgccgcgc tgtaccgcga
    25381 ctttgttgaa ggggtttgac atgaatccgc aggacaaatg ctggcaggtt caccgccatc
    25441 tcgccgaata tgccgaccaa cgcctgacac tcgtccgcaa cgcgcccaag tatatcctgc
    25501 ttgccggtgc ggatgcggac atcagccgca gcctgctggc gaaacgctat ccgcaggcgg
    25561 tatttgaaga atacgattcc cgtgcggact ttttggcggc tgccgctgcc gcccgcaaag
    25621 gcggtttttg gcaaaggttt acgggtaagg gcgtggtgca acactgccaa tccccgatcg
    25681 cgccgctgcc cgaagcgtgt gctgatatgt tgtggtcgaa tctcggactg ttggcggcgg
    25741 aacaaatcct tcctgtgctg cacaactggg cgtgcgcctt gaagacggac gggctgctgt
    25801 tttttacctg cttcgggcgc gacactttta ccgaactgaa atgccgtctg aaagaaaacg
    25861 gcattgaaag ccgcagcgtg atgtttcccg atatgcacga cttgggcgat atgcttgctg
    25921 aaaacggctt ttacgacccc gttaccgata cggcgaagct ggtgttggat tacaaaaagg
    25981 cggaaacgtt ttgggcggat atggacacgc tgggcgtttg gcgggcgatg gcgtggaacg
    26041 atgaaaacgc cgcgcgttcg tgtgtcggga caatatttga gcgggaaggc ggtttgggca
    26101 ttacgctgga aacggtgtac ggacacgccg tgaaaaaact gatgctgccg caaggggaga
    26161 acgtggtgca gttttttccg aagagatgat gtgcagatgc cgtctgaagc cgtttccagg
    26221 tttcagacgg catttgtctg tgaaaaccga cagaaataaa ggaaatgccg atgtatagtg
//
LOCUS       DAXHKG010000011        26002 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.011, whole genome shotgun sequence.
ACCESSION   DAXHKG010000011 DAXHKG010000000
VERSION     DAXHKG010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26002
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.011"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            1..2045
                     /locus_tag="ACFMWP_000366"
                     /pseudo
     CDS             1..2045
                     /locus_tag="ACFMWP_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            2287..3753
                     /locus_tag="ACFMWP_000367"
     CDS             2287..3753
                     /locus_tag="ACFMWP_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC5891029.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFENRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(3954..4922)
                     /locus_tag="ACFMWP_000368"
     CDS             complement(3954..4922)
                     /locus_tag="ACFMWP_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891030.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDSLHGSSQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAYLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRIGKIKRLDIATDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            4999..6291
                     /locus_tag="ACFMWP_000369"
     CDS             4999..6291
                     /locus_tag="ACFMWP_000369"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFC5891031.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIALTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            complement(6794..7480)
                     /locus_tag="ACFMWP_000370"
     CDS             complement(6794..7480)
                     /locus_tag="ACFMWP_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HFC5891032.1"
                     /translation="MYAFTAAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(7555..8028)
                     /gene="queF"
                     /locus_tag="ACFMWP_000371"
     CDS             complement(7555..8028)
                     /gene="queF"
                     /locus_tag="ACFMWP_000371"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HFC5891033.1"
                     /translation="MSRNTEELQGISLLGNQKTRYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFETLARKRLFEHDSQ"
     regulatory      complement(8032..8076)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            8305..9477
                     /gene="farA"
                     /locus_tag="ACFMWP_000372"
     CDS             8305..9477
                     /gene="farA"
                     /locus_tag="ACFMWP_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HFC5891034.1"
                     /translation="MATHGDEVKIQNRQEADSAKAKRKRCLTALTLLFALAAAAAGSA
                     FFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVL
                     AYERAKNELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSA
                     EELAHARAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQ
                     RTQIRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPA
                     ELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDV
                     DRHPLRIGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     gene            9501..11027
                     /gene="farB"
                     /locus_tag="ACFMWP_000373"
     CDS             9501..11027
                     /gene="farB"
                     /locus_tag="ACFMWP_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HFC5891035.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            11277..11510
                     /gene="rpmB"
                     /locus_tag="ACFMWP_000374"
     CDS             11277..11510
                     /gene="rpmB"
                     /locus_tag="ACFMWP_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HFC5891036.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            11542..11697
                     /gene="rpmG"
                     /locus_tag="ACFMWP_000375"
     CDS             11542..11697
                     /gene="rpmG"
                     /locus_tag="ACFMWP_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HFC5891037.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(11976..12284)
                     /locus_tag="ACFMWP_000376"
     CDS             complement(11976..12284)
                     /locus_tag="ACFMWP_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891038.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDYGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(12268..12570)
                     /locus_tag="ACFMWP_000377"
     CDS             complement(12268..12570)
                     /locus_tag="ACFMWP_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HFC5891039.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(12644..15007)
                     /gene="pheT"
                     /locus_tag="ACFMWP_000378"
     CDS             complement(12644..15007)
                     /gene="pheT"
                     /locus_tag="ACFMWP_000378"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HFC5891040.1"
                     /translation="MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFAG
                     VVVAEVKSVEKHPDADRLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVNGLHILPEDAPVGINIREYLDLDDTLFT
                     LKITPNRADCLSVKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRSRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGYPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGM
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(15062..16087)
                     /locus_tag="ACFMWP_000379"
     CDS             complement(15062..16087)
                     /locus_tag="ACFMWP_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC5891041.1"
                     /translation="MVSAIDSLKKNVNYNYVNSSNTHTIQIVHVEKPEGPIKIKRGDT
                     ETSISKQAIWRLADALSTGEPVNVDRVFGASYNFRSALEALLAHTPEIYWCKLQRIQP
                     GLNKSEVVEGHKHIIWLPDRPHEKGVMKEYETDVVISEIPSNNVVYDALSLPSTHSEI
                     DIDVKRRHVQIQIALSAIGFQLGFRTWIARNDQGISYGDKKIADLDGIVQKIESEKLI
                     SSFDGAVQAAMNIDCIWFRNGKLMPAVMEVEHSTGVRSGLARMKQLKDLLPPYANTRW
                     VIVAPDEDRDKVFKEANVPMFKNLDTQYFPYSAVEELYSLCIRRKLTNKAVNEEFLDC
                     FMEKCVM"
     gene            complement(16089..17183)
                     /locus_tag="ACFMWP_000380"
     CDS             complement(16089..17183)
                     /locus_tag="ACFMWP_000380"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC5891042.1"
                     /translation="MIFSFFSGAGFLDLGFELSGFDIAFVNEVHPPFLEAYKYSRSRM
                     DIPKPKYGYFKGSIDECLYAEKAKDLAGWVKKEKQNGIIVGFIGGPPCPDFSIAGKNK
                     GKDGENGKLSQSYVDLICKNQPDFFVFENVKGLYRTAKHREFFNALKRQLSDFGYVCT
                     EKLINAIEYGVPQDRERIILVGFLSQHVDALQKFDWDAHISFPDALEKDWPTTEEVGR
                     VVSQPANIYPELTVQYWFNRNGVDTHPNASKHFQPRAGLEKFQTISEGDDKKKSYKRL
                     HRWRYSPTAAYGNNEVHIHPYLPRRISAAEALAIQSLPKEFELPDNMTLSNMFKTIGN
                     GVPFLAAKGIAMTLKSYLENHYERTKTDGC"
     gene            complement(17254..17700)
                     /locus_tag="ACFMWP_000381"
     CDS             complement(17254..17700)
                     /locus_tag="ACFMWP_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC5891043.1"
                     /translation="MDRLTPEQRKKCMQSNKSKGTKPELALAKAMWALGLRYRKNSGS
                     IFGKPDFSFKKYKVAVFVDGEFWHGKDWEQRKAEIKGNREFWIAKIERNIRRDMEVTG
                     RLKVEGWAVLRFWSNDVVKNTTCCAEKVRQAVRDKQGLSKFQTREK"
     gene            complement(18024..19016)
                     /gene="pheS"
                     /locus_tag="ACFMWP_000382"
     CDS             complement(18024..19016)
                     /gene="pheS"
                     /locus_tag="ACFMWP_000382"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HFC5891044.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSGEIDIMGENGKWLEVGGCGM
                     VHPNVLRNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFAK"
     gene            complement(19362..19721)
                     /gene="rplT"
                     /locus_tag="ACFMWP_000383"
     CDS             complement(19362..19721)
                     /gene="rplT"
                     /locus_tag="ACFMWP_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HFC5891045.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKSALAA"
     gene            complement(19734..19931)
                     /gene="rpmI"
                     /locus_tag="ACFMWP_000384"
     CDS             complement(19734..19931)
                     /gene="rpmI"
                     /locus_tag="ACFMWP_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HFC5891046.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(20078..20599)
                     /gene="infC"
                     /locus_tag="ACFMWP_000385"
     CDS             complement(20078..20599)
                     /gene="infC"
                     /locus_tag="ACFMWP_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HFC5891047.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(20617..22530)
                     /gene="thrS"
                     /locus_tag="ACFMWP_000386"
     CDS             complement(20617..22530)
                     /gene="thrS"
                     /locus_tag="ACFMWP_000386"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HFC5891048.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVAVKLSLRPEQRAGSDEVWDKAEQGLRDALTACGVE
                     WEELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(22583..22659)
                     /locus_tag="ACFMWP_000387"
     tRNA            complement(22583..22659)
                     /locus_tag="ACFMWP_000387"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22623..22625),aa:Val,seq:gac)
     gene            22838..23953
                     /gene="tgt"
                     /locus_tag="ACFMWP_000388"
     CDS             22838..23953
                     /gene="tgt"
                     /locus_tag="ACFMWP_000388"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HFC5891049.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQAKKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEQFDFPGLAVGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRTGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQARFHENRARGTD"
     gene            23963..25045
                     /gene="hemH"
                     /locus_tag="ACFMWP_000389"
     CDS             23963..25045
                     /gene="hemH"
                     /locus_tag="ACFMWP_000389"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HFC5891050.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFFPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAKRMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHHDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            25237..25638
                     /locus_tag="ACFMWP_000390"
     CDS             25237..25638
                     /locus_tag="ACFMWP_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC5891051.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(25701..25991)
                     /locus_tag="ACFMWP_000391"
     CDS             complement(25701..25991)
                     /locus_tag="ACFMWP_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891052.1"
                     /translation="MAKYFTETGISVREYFDFFGEFVVLPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
BASE COUNT         6274 a         6746 c         6659 g         6323 t
ORIGIN      
        1 gtcgggttaa tctattaaca ttatctgttt tatcgctgtt ttgcacgcca tatgtttgag
       61 gttcggatgc gtacgatccc gtcaaagaag ccgagattaa aaacaaattt attttagaag
      121 cggcggaaga cagaaattcc cacgtttggc gcggcccgtg cagcatatct tttgattgct
      181 tcggtatgtt cagagctcag cttggttcaa atactcgttc taccaaaatc ggcgacgatg
      241 ccgatttttc attttcagac aagccgaaac ccggcacttc ccattatttt tccagcggta
      301 aaaccgatca aaattcatcc gaatatgggt atgacgaaat caatatccaa ggtaaaaact
      361 acaatagcgg catactcgcc gtcgataata tgcccgttgt taagaaatat attacagata
      421 cttacgggga taatttaaag gatgcggtta agaagcaatt acaggattta tacaaaacaa
      481 gacccgaagc ttgggaagaa aataaaaaac ggactgagga ggcgtatata gaacagcttg
      541 gaccaaaatt tagtatactc aaacagaaaa accccgattt aattaataaa ttggtagaag
      601 attccgtact cactcctcat agtaatacat cacagactag tctcaacaac atcttcaata
      661 aaaaattaca cgtcaaaatc gaaaacaaat cccacgtcgc cggacaggtg ttggaactga
      721 ccaagatgac gctgaaagat tccctttggg aaccgcgccg ccattccgac atccatacgc
      781 tggaaacttc cgataatgcc cgcatccgcc taaacacgaa agatgaaaaa ctgaccgtcc
      841 ataaagcgta tcagggcggc gcggatttcc tgttcggcta cgacgtgcgg gagtcggacg
      901 aacccgccct gacctttgaa caaaacgtca gcggaaaatc caatgtggtt ttggaacgcc
      961 ggccggaaaa tctgaaaacg ctcgacgggc gcaaactgat tgcggcggaa aaggcagacc
     1021 ctaattcgtt tgcgtttaaa caaaattacc ggcagggact gtacgaatta ttgctcaagc
     1081 aatgcgaagg cggattttgc ttgggcgtgc agcgtttggc tatccctgag gcggaagcgg
     1141 ttttatatgc ccaacaggct tatgcggcaa atactttgtt tgggttgcgt gccgccgaca
     1201 ggggcggcga cgtgtatgcc gccgatccgt cccgtcaaaa attgtggctg cgcttcatcg
     1261 gcggtcggtc gcatcaaaat atacggggcg gcgcggctgc ggacgggcgg cgcaaaggcg
     1321 tgcaaatcgg cggcgaggtg tttgtacggc aaaatgaagg cagccggctg gcaatcggcg
     1381 tgatgggcgg cagggccggc cagcacgcat cagtcaacgg caaaggcggt gcggcaggca
     1441 gttatttgca tggttatggc gggggtgttt atgctgcgtg gcatcagttg cgcgataaac
     1501 aaacgggtgc gtatttggac ggctggttgc aataccaacg tttcaaacac cgcatcaatg
     1561 atgaaaaccg tgtggaacgc tacaaaacca aaggttggac ggcttctgtc gaaggcggct
     1621 acaacgcgct tgtggcggaa ggcgttgtcg gaaaaggcaa taatgtgcgg ttttacctgc
     1681 aaccgcaggc tcagtttacc tacttgggcg taaacggcgg ctttaccgac agcgagggga
     1741 cggcggtcgg actgctcggc agcggtcagt ggcaaagccg cgccggtatt cgggcaaaaa
     1801 cccgttttgc tttgcgtaac ggtgtcaatc ttcagccttt cgccgctttt aatgttttgc
     1861 acaggtcaaa atctttcggc gtggaaatgg acggcgaaaa acagacgctg gcaggcagga
     1921 cggcgctcga agggcggttc ggcattgaag ccggttggaa aggccatatg tccgcacgca
     1981 tcggatacgg caaaaggacg gacggcgaca aagaagccgc attgtcgctc aaatggctgt
     2041 tttgatgcgt cgggaaatgt tttgacgcac aggcggcaca ccggcacggc cccgcgcgcc
     2101 gccccgcaaa ccaatccgaa ccctgccgcc ccgaagggcg gggcatcatg atgaaaccgg
     2161 cggaaaaccg ccggtttttt gccgccgttt gaaacccgat tctggcttca gacggcattg
     2221 tcgcggcatc gggcggcagg gtttggaaca gcggcataaa aaactgatac aatccgccga
     2281 ttgataatgg ttatttttta tttttgtggg aagacattta tgcctgcacg aaacagatgg
     2341 atgctgctgc tgcctttatt ggcaagcgcg gcatatgccg aagaaacacc gcgcgaaccg
     2401 gatttgagaa gccgtcccga gttcaggctt catgaagcgg aggtcaaacc aatcgacagg
     2461 gagaaggtac cggggcaggt gcgggaaaaa ggaaaagttt tgcagattga cggagaaacc
     2521 ctgctgaaaa atcccgaatt gttgtcccgc gcgatgtatt ccgcagtggt ctcaaacaat
     2581 attgccggta tccgcgttat tttgccgatt tacctacaac aggcgcagca ggataagatg
     2641 ttggcacttt atgcacaagg gattttggcg caggcagacg gtagggtgaa ggaggcgatt
     2701 tcccattacc gggaattgat tgccgcccaa cccgacgcgc ccgccgtccg tatgcgtttg
     2761 gcggcggcat tgtttgaaaa caggcagaac gaggcggcgg cagaccagtt cgaccgcctg
     2821 aaggcggaaa acctgccgcc gcagctgatg gagcaggtcg agctgtaccg caaggcattg
     2881 cgcgaacgcg atgcgtggaa ggtaaatggc ggcttcagcg tcacccgcga acacaatatc
     2941 aaccaagccc cgaaacggca gcagtacggc aaatggactt tcccgaaaca ggtggacggc
     3001 acggcggtca attaccggct cggcgcggag aaaaaatggt cgctgaaaaa cggctggtac
     3061 acgacggctg gcggcgacgt gtccggcagg gtttatccgg ggaataagaa attcaacgat
     3121 atgacggcag gcgtttccgg cggcatcggt tttgccgacc ggcgcaaaga tgccgggctg
     3181 gcagtgttcc acgaacgccg cacctacggc aacgacgctt attcttacac caacggcgca
     3241 cgcctttatt tcaaccgttg gcaaaccccg aaatggcaaa cgttgtcttc ggcggagtgg
     3301 gggcgtttga agaatacgcg ccgggcgcgt tccgacaata cccatttgca aatttccaat
     3361 tcgctggtgt tttaccggaa tgcgcgccaa tattggatgg gcggtttgga tttttaccgc
     3421 gagcgcaacc ccgccgaccg gggcgacaat ttcaaccgtt acggcctgcg ctttgcctgg
     3481 gggcaggaat ggggcggcag cggcctgtct tcgctgttgc gcctcggcgc ggcgaaacgg
     3541 cattatgaaa aacccggctt tttcagcggt tttaaagggg aaaggcgcag ggataaagaa
     3601 ttgaacacat ccttgagcct ttggcaccgg gcattgcatt tcaaaggcat cacgccgcgc
     3661 ctgacgttgt cgcaccgcga aacgcggagt aacgatgtgt tcaacgaata cgagaaaaat
     3721 cgggcgtttg tcgagtttaa taaaacgttc tgattgctgt tccttttcgg aggaaaccct
     3781 gccggcggcg gtatcacggc gggcatcggc ggctttcggg cggtgctttg cgtgccgccg
     3841 cgtgtgcgga aacgcattcc ggtttttccg gcataacggc gatgcgaggt aaaatgccgt
     3901 ctgaaacccg attcgggctt cagacggcat tgtcgcggtt gcggcgggcg ggttcaccag
     3961 attccgtcaa aggttttcgc gccgcgccaa aatttccacc tgtcggcggg tttgaaggtc
     4021 agcgtaccgc cgtgttgtcc gtccgtggcg atgtccagcc gtttgatttt gccgatgcgg
     4081 acggcttcgt aaagcggtgc gaaccagcgt tcttcccact gctgcaatat tgccgcatac
     4141 cgctccctgt cccctgtcag ggcggtcagg cgcaaatcgt ccataaacag gatatggtgc
     4201 gtgtcgggta ggtatgccgc cgtttcttca taggcgcgga agttgtcggg caatgcgcgg
     4261 cggtcggggt ggaaacggct ccaaaccgta tcggcgaaaa gcgtgccgcc ttgactgctt
     4321 ccgtgcagac tgtcccaaag ccataagccg ttcaactcgg gcagcccgcg tttcttgcgg
     4381 ttatggttga cggggtgcgc cgccagccac atttggattt cggtttggac gcgcagccat
     4441 tccaacgcgt cttccccgtc cggctgatcg tccgcgccca acaatccgcc caagtccaaa
     4501 acgggcttcg cgccccagcg gtacgcgcaa ggaagggaaa ccagccataa ttcgggcagg
     4561 acgggaacga aacgccatgg aatgtcgccg taaaacgccg acaggtcgcg gcagagccgt
     4621 tccgcttcat ccgtaccgac gttcagatat tccgccgtta gcacatttgc ctgatgcatc
     4681 cccatctttt gccagacggg cgtggcgagc gcgacggttt cagacggcat attcaggctt
     4741 tgcgccgcgc gttccgccag tctgccgcac cacaaataac gcgcgtaaaa tgccgaagcc
     4801 gtgcagcttt ggcggtgcag cgagccgtat tgcaggattt tgttgaaggc gggcaggcat
     4861 agaggtattc ggatttcgtc ttcatccaaa ttgagcgagg ggagggcgag ggtgagtttc
     4921 atcgtttgat gtctgacaaa tgcggatcgg gcggatatta tagaggattc ggcgcaaacg
     4981 ccgtcaaaaa ggaacaatat ggctgtcttc ccactttcgg caaaacatcg gaaatacgcg
     5041 ctgcgcgcgc ttgccgtttc gattattttg gtgtcggcgg catacattgc tttgacagag
     5101 aggacggaac gcgtcagacc gcagcgcgtg gaacaaaatc tgccgccgct gtcttggggc
     5161 ggcagcggcg ttcagacggc atattgggtg caggaggcgg tgcagccggg cgactcgctg
     5221 gcggacgtgc tggcgcgttc gggtatggcg cgggacgaga ttgcccgaat cacggaaaaa
     5281 tatggcggcg aagccgattt gcggcatttg cgtgccgacc agtcggttca tgttttggtc
     5341 ggcggcgacg gcggcgcgcg cgaagtacag ttttttaccg acgaagacgg cgagcgcaat
     5401 ctggtcgctt tggaaaagaa aggcggcata tggcggcggt cggcttctga ggcggatatg
     5461 aaggttttgc cgacgctgcg ttcggtcgtg gtcaaaacgt cggcgcgcgg ttcgctggcg
     5521 cgggcggaag tgcccgtcga aatccgcgaa tccttaagcg ggattttcgc cggccgcttc
     5581 agccttgacg gtttgaagga aggcgatgcc gtgcgcctga tttacgacag cctgtatttc
     5641 cacgggcagc aggtggcggc gggcgatatt ttggcggctg aagtcgttaa gggcggcaca
     5701 aggcatcagg cgttctatta ccgttcggac aaggaaggcg gagggggcgg caattattat
     5761 gatgaagacg gcagggtgtt gcaggaaaaa ggcggcttca acatcgagcc gctggtctat
     5821 acgcgcattt cttcgccgtt cggctaccgt atgcacccca tcctgcacac ttggcggctg
     5881 cacacgggca tcgattatgc cgcaccgcag ggaacgccgg tcagggcttc cgccgacggc
     5941 gtgattacct ttaaaggccg gaagggcgga tacggcaacg cggtgatgat acgccacgcc
     6001 aacggtgtgg aaacgctgta cgcgcacttg agcgcgtttt cgcaggcaca aggcaatgtg
     6061 cgcggcggcg aggtcatcgg ttttgtcggt tcgaccgggc gttcgacggg gccgcacctg
     6121 cattacgagg cgcgcatcaa tgggcagccc gttaatcctg tttcggtcgc attgccgaca
     6181 cccgaattga cgcaggcgga caaggcggcg tttgccgcgc agaaacagaa agcggacgcg
     6241 ctgcttgcgc gcttgcgcgg cataccggtt accgtgtcgc aatcggattg aagtttgaac
     6301 cggcgacgaa aacaatgccg tctgaaaacc tgcaaacagg ttttcagacg gcatttatag
     6361 tggattaaca aaaaccagta cgtcgttgcc tcgccttagc tcaaagagaa cgattctcta
     6421 agatgctgaa gcaccaagtg aatcggtttc gtactatttg tactgtctgc ggcttcgtcg
     6481 ctttgtcctg atttttgtta atccaccata cagtcgatta aaataaaact aagttaagga
     6541 agcactgccg tcattcccgt accgtcggga atccggacac cacggcacgg aaacccatcc
     6601 gccgtcattc ccgcgaaagc gggaatctag aaatacaatg cggtaggagt ttatcggaaa
     6661 tgactgaaac ccaacgtacc ggattcccgc tttcgcggga atgacgaagt gggcgggaat
     6721 ccggatttat ccgttccgac agtgtttgca aataaaagaa aacccaaccg tcccgattcc
     6781 cggcagggct gttttacgga ttttgcagcg agggcgcggg gcggtcttgc gcctgtttgg
     6841 tttgcagggt tgtcagtttt ttcgtcagca gattcagaat cacgccgtag gcgggcagga
     6901 aaaacagacc gcagacggta agtttgaaca ggtaatcgac aaaagcgatg ccctgccagt
     6961 ttgccgccat aaattcatcg ctgctggcgt aaaaggcaac ggcaaaaaac actaacgtgt
     7021 ccagtgcatt gccgatgacg gttgatgcgg tcggtgcaat ccaccacgct ttcagacgac
     7081 gtaatttgtt gaacacaaaa atatcaagga tttgtccgag cgcgtaggcg gcaaagctgg
     7141 ccaaggcgat gcgtccgaca aaggtgttga attcggatag tgcgcccaag cctgtccaac
     7201 tgccgttgtg gaacaaaacg gaaaagacgt aggaaagcaa aagggcgggg aacatcaccc
     7261 aaaagataat ccgccgtgcc aagtgcgaac cgaaaatgcg gacggtcagg tcggtggcga
     7321 ggaagatgaa gggaaaggaa aacgcacccc aagtggtgtg gatgccgaaa atttggaagg
     7381 ggaactgcac cagatagttg ctggcggcga tgatgaggat atggaaaagc accagccaga
     7441 agagtgcctt ctgttgctgt gcggcagtaa atgcgtacat aaaaatcttt cggaaaggcg
     7501 ttcagacggc atatcgtatc gaaggaatgc cgtctgaaat atgggaagga tggtttattg
     7561 gctgtcgtgt tcgaacaagc gtttacgcgc caatgtttcg aactcggtgc ctgctttgcc
     7621 gtaattggcg aaaggatgaa tggcgatgcc gccgcgcggt gtgaactcgc cgaatacttc
     7681 gatgtatttc ggatccatca gggcaatgag gtctttcatg atgatgttga cgcagtcttc
     7741 atgaaaatcg ccgtggttgc ggaagctgaa gaggtagagt ttcagggatt tgctttccac
     7801 cattttgatg tgcggaatgt agcggatgta gatggtggcg aagtcgggct gcccggtcat
     7861 ggggcagagg ctggtgaact ctgggcagac gaatttgacg aaatagtcgt tgtcgggatg
     7921 tttgttgtcg aatgcttcga gaatttcagg cgcgtagccg gtcggatatc gggttttttg
     7981 attacccaaa agcgagatgc cttgcagctc ttcggtattg cgggacatag ggtttcctta
     8041 gttttttagt gtgggaggtt ttcgaaccac ggggcgacga ttgtaatata agcggcggta
     8101 tctgtgtagc gtccccgccc ggtacggcgc gcttatccga ttatttttga acataaatta
     8161 attttgcgga acgcgggtgt ggcggtttat ttgaatattc attctaaatc attaacttga
     8221 ttgggttatt gccagggtat agaatccgag ctgcctttga tcggctttat ttatatcgta
     8281 ttaaaaatat tcggaattgg aataatggca acacacggag acgaagtgaa aattcaaaac
     8341 agacaagaag ccgatagcgc aaaagccaaa cgcaaacgct gcctgacggc attgacgctg
     8401 ctgttcgcgc ttgccgccgc agccgccggg tcggcgtttt ttttatggtg gcagcacgaa
     8461 gaggaaacgg aagacgctta tgttgccgga cgcgtggttc aggttacgcc gcaaaagggc
     8521 ggtacggtgc ggaaggtttt gcacgacgat acggatgccg tgaaaaaagg cgacgtgctg
     8581 gcggtattgg acgacgataa tgatgtgctg gcttacgagc gggcaaaaaa cgagctgatt
     8641 caggcggtgc ggcaaaaccg ccggcaaaat gccgccactt cgcaggcggg ggcgcaggtt
     8701 gccttgcgcc gggcggattt ggcacgcgcg caggatgatt tgcgccgccg gtctgctttg
     8761 gcggaatcgg gcgcggtgtc cgccgaagag ctggcacatg cccgtgcggc agtgtctcag
     8821 gctcaggcgg cagttaaggc ggctttggcg gaagaatctt cggcgcgtgc ggctttgggc
     8881 ggtcaggttt ctttgcgcga acagccggcg gttcagacgg caatcggcag gttgaaagat
     8941 gcgtggttga accttcagcg gacgcaaatc cgcgcgccgg cggacggtca ggtggcgaag
     9001 cgttcggtgc aggtcgggca gcaggtggcg gcaggcgcgc cgctgatggc ggtggtgccg
     9061 ctgtcggatg tgtgggtgga tgctaatttt aaagagacgc agttgcggca tatgaaaatc
     9121 ggacagcctg ccgagctggt gtccgatttg tacggcaaac aaattgttta tcgcggcagg
     9181 gtggcaggtt tttcggcagg tacgggcagc gcgttttcgc tgattccggc gcaaaacgca
     9241 acgggcaact ggattaaagt ggtgcagcgc gtccccgtcc gtatcgtgct gaaccgcgaa
     9301 gatgtggaca ggcatccgtt gcgtatcggt ttgtcgatga cggttaaagt ggatacttcc
     9361 gccgcaggcg cgcctgtttc aaaaacgccg ggtgcggcat tgccggaaat ggaaagtacc
     9421 gactggtcgg aagtcgatcg gacggtcgat gaaatcctcg ggcaatccgc gccctgatgc
     9481 cgtctgaaac ggaggacaca atggattatc caccgcttaa gggtgcggca ttggcgtggg
     9541 ttacgctgtc tttggggctt gccgtattta tggaagtttt agatacgact atcgccaatg
     9601 tcgccgttcc cgtcatcgcc ggcaacctcg gtgcggcaac cacgcagggg acgtgggtca
     9661 ttacttcttt tgctgtggca aacgccgttt ccgtgccgtt aacgggcttt ttggcaaaac
     9721 gtatcggcga ggtcaaattg tttaccgccg ccgctgtcgg tttcgtcatc acatcgtggc
     9781 tgtgcggtat tgcccccaac cttcagtcgc tggttgtttt ccgcatcttg cagggcttta
     9841 tcgccgggcc gctgattccc ctgtcgcaaa gcctgttaat ggcatcctat ccgcccgcaa
     9901 aacggacgct ggcactggca ttgtgggcaa tgaccgtcgt tgtcgcccct gttctcgggc
     9961 cgatactcgg cggttggatt tccggaaact ggcattgggg ttggattttc ttcattaata
    10021 tccctatcgg tatcatatcg gcatggatta catggaaaca tttgaaatat cgggaaacgg
    10081 aaaccgttaa aatgccgacc gactatgtcg ggcttacatt gatggtagtc ggtatcggcg
    10141 cgttacagat gatgctggac aggggtaagg aactcgactg gttcgcctct ggagaaatca
    10201 ttaccttggg cgtagtcgca ctggtgtgtt tgtcgtattt tattgtttgg gaattgggag
    10261 aaaaatatcc gattgtcgat ttatcgctgt ttaaagatcg gaattttacc gtcggcgtaa
    10321 ttgccacatc attgggtttt atggtgtata tggggacgct gaccttgctg ccgttagtgt
    10381 tgcagaccaa cctgggctat acctccacgt gggcggggct tgccgccgca cccgtcggca
    10441 tcctgcccgt cttcctgtct ccgttaatcg gcaggttcgg caataaaatc gatatgcgcc
    10501 tgctcgtaac cgccagcttc ctgacctttg cctttacttt ctattggcgc accgattttt
    10561 atgccgacat ggatatcggc aacgtcatct ggccgcagtt ttggcagggg gcaggcgttg
    10621 ccatgttctt cctgccgctg accaccatca cactgtcgca catgaagggc ggacagattg
    10681 ccgccgcagg cagcctgtcg aatttcttgc gcgtgctgat gggcggtgtc ggcgtatccg
    10741 tcgtcagcac cctgtgggaa cggcgcgaag cgttgcacca tacacgcttt gccgaacaca
    10801 tcacgcccta ttccgcaaca ttgcacgaaa cggccgctca tttgtcccag cacggcgttt
    10861 ccgacattca aaccctaggc atcatcaaca ataccattac ccagcagggt tttattatcg
    10921 gctcgaacga aatctttatg gcgggcagct tgttattcat tatcatgata cccgtcatat
    10981 ggctggcaaa accgccgttc cacaacggcg gcggcggtgg acattgaggg atttgaaaac
    11041 ttgaaatgcc gtctgaaaat actggaaata tgttcggacg gcattttgaa tgcagcagtt
    11101 cccgaaatcc gctataatcg cgccccatct gtttcgcacc tgcaaacgtt ccacagatgc
    11161 gacaatcgga aggattatcc gcgcaaaaca gccgtttttc tctaaaacac ttgaactaac
    11221 actgtttttc gtggtataaa tcgcgtttta ctattttaga agtttggaga ctgattatgg
    11281 cacgagtttg caaagtgacc ggcaaacgcc cgatgtccgg caacaacgta tcgcacgcca
    11341 acaacaaaac caaacgccgt tttttgccca acttgcaatc acgtcgtttt tgggtagaaa
    11401 gtgaaaaccg ctgggttcgc ctgcgcgttt ccaacgctgc actgcgtacc atcgacaaag
    11461 taggcattga tgtcgtattg gctgatttgc gtgctcgcgg cgaagcttaa tttaaacact
    11521 atttaattaa ggattactgc aatgcgcgat aaaatcaaac tggaatccag tgcaggtact
    11581 ggtcacttct acaccactac caaaaacaaa cgcactatgc ccggcaaact ggaaatcaaa
    11641 aaattcgatc cggttgcccg caaacacgta gtgtacaaag aaaccaaact gaaataattt
    11701 cagtttgaaa gcaaagcctc cgactgttcg gaggcttttt tatttttatc gtgtttcttt
    11761 tccgcttgaa acatctgctg tatgcgaatc tgctgcaaac cgtctgccaa ggatagagaa
    11821 cgattctcta aggtgctgaa gcaccaagtg aatcggttcc gtactatttg tactgtctgc
    11881 agcttcgtcg ccttgtcctg atttttgtta atccactata attatttttt agcgtgtaaa
    11941 acaaaaccgg ctgcatacct gcaaccggcc tcaaatcagc acaattcctt atccaaatcc
    12001 gccaacagct ctttcagacc gtctccgatt tcctgaagcg taaccggacg gttgccgtcc
    12061 gaacccgact ccgcaccttc tgcatacggt gcaaacgtgc tctgcaattt caacagtttc
    12121 accacatcca aacgggtgta gcgttcgccg ccgtaaccga caaccacacc ataatcatgc
    12181 tgccattgcg caaaaccata ggggctgatt tgcaacagtc cgcacaactc gtccagcgtg
    12241 aaatagcgtt ttgcgggaac cttcaaatca acgttgtttg tcatagtagt gttccaccat
    12301 gcttttgagt ttctggctgg catggaaagt taccacgcgg cgggcggtaa tcggcacttc
    12361 ctcgccggtt ttaggattac gacccgggcg ttgcggcttg tcgcgcaact ggaaatttcc
    12421 gaaaccggaa attttgattt cttcgccgct tgccaaagtg ctgcggattt cttcaaaaaa
    12481 gagttcgacg atttctttgg catcgttttt ggtgacgttg ctgactttgt ctaccaaaat
    12541 atcggccagt tctgctttag tgagagtcat atgattacct tctgttgtaa cagttgtgga
    12601 ttattaccaa tttttattta aaattcaagc gaatatttat tttttaactg cgaagccgcg
    12661 cccctgccgc cgttgccgcg ccaatcagtt ttccgataag cggctcgacc gcctcatccg
    12721 tcagcgtgtt ttccatatcc tgcaaaatca ctttgaccgc cacgctcttc atcccttcgg
    12781 gcagtcccat gccgcgatac acgtcaaaca cgctgatttc ctgtaccaac ttgtttgccg
    12841 cgcctttcaa gacaagcagc aaatcatcat ggctcatagc ttccggcatc acaaacgcca
    12901 aatcgcggcg caccggctgg aatttcgata cggcccgata gcgcgttttc ccgcattcca
    12961 acacggccgc catatcgatt tcaaatacca gcggcgcttg cggcaggtcg tatttttgca
    13021 gccatttcgg atgcagttcg ccgacaaagc cgatgacttt gccgtctgaa acgatattgg
    13081 cggcgcgtcc gggatgcagg gcgggatatc cggttttaac gaactcgacc gctttgtttt
    13141 tcaacagatt ttccacatct gccttgatgt cgtaaaaatc cgcattgcgc gttttcccgc
    13201 cccattgttc gggcattgcc gcgccgtacc acaagccgcc gatgcgttcg ttttggacaa
    13261 accggccgtc tgaacctttg ccgaacacgc gggcgatttc aaacacgcgc acgcggtttt
    13321 gtttgcggtt caggttgttt tgcaaaattt ccaccaagcc gccgatgagt gtggaacgca
    13381 tcacggcata ttgcgccgcc agcgggtttt gcaggcggat ggggtcggcg ttggcggcaa
    13441 aatcttgttc ccactgctcg tcaacgaagg catagctgac cacttcgcgg tagccacgcg
    13501 ccgccatttc gttgtaaacg gcaaaacgcg agcgacgtgt ttcgggcagt tccagcattt
    13561 tcagacggcc tgacgtgtaa tcgtcgggga tgttttcata gccgtaaacg cgtccgattt
    13621 cttcaatcaa atcagcctca atttcgatgt caaaacggaa gctcggcgcg gtaacgcgga
    13681 agccttccgc cgttttctcg ggctgcagac ccaagtgttg caaaatggtt tccacctgtt
    13741 cggcaggaat gtccacgccc aacacggttt tcagacggtc caaacgcaat ccaacctgct
    13801 tcgcttcagg caattcgcct tgcgcttcca ccatctcgcc tgccgcacca ccgcaaatct
    13861 gcaacaccaa ttcggtagca cgttcaatgg catccgcctg caaacggtaa tccacgccgc
    13921 gctcgaagcg gaacgacgaa tccgaaccga aaccgtattg gcgcgatttg ccggcgatga
    13981 tttcgggcgc aaaccaagcc gcttccagca cgatattttg cgtgccgtct gaaaccgcgc
    14041 tcgccgcgcc gcccattaag cccgccaaac tcaacgcgcc tttttcgtct gccacgacca
    14101 gcgtattttc agacagggaa acggttttct cgttcaggca ttccagcgtt tccccttcgc
    14161 gcgcgcggcg gatgtgcagg ctgccggaaa gtttgtcggc atcgaaaacg tgcatcggct
    14221 ggccgatttc cagcattaca taattgccga tgtccaccag cacggaaata ctgcggatgc
    14281 cgctgcgctc caaacgttgt ttcatccaat cgggagtagc cgctttcgca ttgacatttt
    14341 caataacgcg gctgataaaa cggccgcaat cggcaggcgc gttaatctgc acgggctgtt
    14401 ttcgactgcc cgtgatcggc gcggtatgga tttcgggctg cctgaacgcg caccccgtca
    14461 atgcggacac ttcgcgcgca atgcccttaa cactcaagca atcagcgcgg ttaggcgtaa
    14521 ttttcaacgt aaacagcgta tcgtccaaat ccaagtattc acggatattg ataccgacag
    14581 gcgcgtcttc aggcaaaatg tgcaggccgt tcacaccatc atcaggcaaa cctagttcat
    14641 tggtcgaaca cagcataccg tttgatggca cgccgcgcat tttggtcggc ttgattttga
    14701 aattacccgg caaaacggca cccggcaacg aacacggcac tttgatgccc gctttcacat
    14761 tcggcgcacc gcacacgatc tgaaccaact ctcccgtacc cgcatcaact cgggtaacgt
    14821 tcaaacggtc tgcatccgga tgtttttcaa cggatttcac ttcggcaaca accacgcccg
    14881 caaaggcagg tgcggcagtt tcagcctctt ccacttccaa gccggacatc gttaacagat
    14941 gttccagctt atcggcggaa agttcggtat cggcttgggt tttcagccat gagtaggaga
    15001 attgcatatt tttcctaagg attaaatttg attggacaac ttaagggtaa ccgagtgtaa
    15061 attacattac acatttttcc ataaagcagt ctaaaaattc ttcattgaca gctttatttg
    15121 tcaatttccg gcgaatgcac aaggaataca actcttcaac tgcggaataa ggaaaatatt
    15181 gggtatctaa atttttaaac atcggaacat tcgcttcttt aaaaacttta tccctatctt
    15241 catcaggagc aacgataacc cagcgcgtat tagcatatgg tggcaacagg tctttcaact
    15301 gcttcatccg tgcaaggccg gaacgtacac ccgtactatg ttccacttcc atcaccgccg
    15361 gcatcagttt tccattcctg aaccagatgc aatcaatatt cattgccgcc tgaaccgcgc
    15421 cgtcaaacga actgatcagt ttctcgcttt ctatcttttg tacgatacca tccaaatcag
    15481 caattttctt atccccataa ctaatacctt ggtcgtttct cgcaatccac gtcctgaaac
    15541 caagttgaaa acctattgct gaaagggcaa tctggatttg cacgtggcgg cgttttacat
    15601 ctatatctat ttctgaatgg gttgaaggaa gggataaagc atcgtaaacc acattgttgg
    15661 aggggatttc cgaaataacg acatctgtct catattcctt cattacgcct ttttcatgtg
    15721 gcctatcggg aagccaaata atgtgcttgt gcccttccac cacctcgctt ttattcagac
    15781 ccggttgtat ccgctgcaat ttgcaccagt aaatttcagg tgtatgggca agcaatgcct
    15841 ccagtgcgga acgaaagtta taacttgcgc caaacaccct gtccacattg acaggctccc
    15901 ccgtggacaa cgcatctgcc aaccgccaaa ttgcttgttt cgatatcgaa gtttccgtat
    15961 ctcccctttt aatcttaatc ggaccttccg gtttttcaac atggacgatt tgtatggtat
    16021 gcgtatttga gctgttcaca tagttataat tgacattttt tttcaagcta tcaatcgcac
    16081 tgaccaaatt agcagccgtc agtttttgtc cgctcatagt gattctccaa ataagatttt
    16141 aatgtcatcg ctatcccttt tgctgccaaa aacggtacac cgttgcctat agttttgaac
    16201 atattgctca atgtcatgtt atcaggcagc tcaaactcct tcggcaaaga ctgtattgcc
    16261 aatgcctccg cagcggaaat ccttcttggc agatagggat gaatgtggac ttcgttgttt
    16321 ccgtatgcag cagtcggaga ataacgccag cggtgtaggc gtttatagga cttcttttta
    16381 tcatcccctt cgcttatggt ttgaaatttt tctaaacccg ctcttggttg gaagtgtttg
    16441 ctcgcattcg ggtgtgtatc caccccattg cgattgaacc aatactgaac ggtcaactca
    16501 gggtatatgt ttgcaggctg actgaccact cttcctactt cttctgtcgt aggccaatct
    16561 ttttccaagg catcagggaa tgaaatatga gcatcccaat caaacttctg caaagcatca
    16621 acatgctgac tcaaaaaacc cactaggata atcctttccc tgtcttgcgg tacgccgtat
    16681 tcgatggcat tgatgagttt ttcagtgcat acatatccaa aatcagaaag ttgccgtttc
    16741 aacgcattga aaaactccct atgcttggca gtcctatata gtcctttcac attctcaaat
    16801 acaaaaaaat caggctggtt tttacaaatt aaatccacat aactttgtga taacttacca
    16861 ttctccccat ccttaccttt atttttccct gcaatagaaa aatccggaca tgggggacct
    16921 ccaataaatc cgacaataat gccattttgt ttttcctttt taacccagcc agccaaatct
    16981 tttgctttct cagcataaag acattcgtca atactaccct taaaatatcc gtatttaggc
    17041 ttcgggatat ccattctgct tcgagagtat ttatatgctt ccaaaaatgg gggatggact
    17101 tcattaacga aggcaatatc aaatcctgac aactcgaagc ccaaatccaa aaagcccgca
    17161 ccagagaaaa aagaaaaaat caaagttttt tttctttcct gccgtatgct tatatccaaa
    17221 ttgcagcttt tatccgtcaa ctggaagggg agattatttt tctctcgttt gaaattttga
    17281 caatccctgt ttgtcgcgga cggcttgtct gactttttcg gcacagcagg ttgtattttt
    17341 aacgacatca ttactccaaa aacgtaaaac cgcccagccc tcgaccttca gacggcctgt
    17401 tacttccata tcccttcgga tattgcgttc tatcttggca atccaaaatt cgcggttgcc
    17461 ctttatttcc gcctttctct gttcccaatc cttgccgtgc caaaactcgc catcaacaaa
    17521 cacggcaact ttatattttt taaatgaaaa atcaggcttc ccaaaaatgc ttccgctatt
    17581 tttccgatac ctgagcccca aagcccacat cgccttcgcc aacgcaagct cgggcttcgt
    17641 ccccttgctt ttgttggact gcatacattt tttgcgctgt tcgggggtta atctgtccat
    17701 ttcgtgaggc ctgaaacgcg tttatacgaa agcgcattca ttttacgcgg catcgttgcg
    17761 gattccggca gttttgcacc ccttgcaagg aaacaacaaa acccaatcgc gcaggaagcc
    17821 acctgtttcg tcaggttttc cctgcaaagc cgcaaggttc gcagccggac ggactcaaaa
    17881 ttaccaagca tcccatccgc acaaatcttc agaacgcatc aattcatctg ccgaaatccc
    17941 gccgaaatct tgccgcaggc tttttcagcc cgtccggccg gacaatatgc gggttgcact
    18001 ccgcttgcag gctgcccgca ccattatttc gcaaactgct tcaaaaaatt caaatcgtta
    18061 tcaaaaaaca agcgcaaatc gttcacgttg taacgcagca tcgcgaaacg gtcgagaccg
    18121 ataccgaaag cgaaaccggt gtatttttcg ggatcgatat tcacatttct caacacgttg
    18181 ggatgcacca tgccgcagcc gccgacttcc agccatttgc cgttttcgcc cataatgtcg
    18241 atttcgccag acggttcggt gaacgggaag aaagacgggc ggaaacgtac ttgcaaatca
    18301 tcgcgttcaa agaagcgacg gataaaatcc gtgaacactg cttttaagtc ggcaaaagtt
    18361 acaccctctt ctacccacaa accttccgcc tgatggaaca taggcgagtg cgtggcatcg
    18421 ctgtccacac ggtaaacgcg gccgggggcg ataatgcgga tgggcggctc ttttttatcg
    18481 agcatatagc ggatttgaat cggggaagtg tgcgtacgca aaacatcacc gttttcaacg
    18541 taaaacgtat cctgcatcgc acgggcagga tggtttgcag ggatgttcag ggcttggaaa
    18601 ttgtgaaaat cgtcttcgat ttcaggcccg tccgccactt cgaaacccat tccgtgaaag
    18661 agttcgacca cacgttgcaa ggtcagggtt acgggatgca ggctgccgcc ttcctgagcg
    18721 cgtccgggca gggtaatgtc gagggcttcg gcggcaagtc gggcttgcag cttggcttcg
    18781 ttgagggcat cgcgtttggc attaaaagcc gtctgaaacc ggtttttgca ttcattgata
    18841 tgcgcaccta tggttttgcg ctcttcaggc gacatttgcc ccaaagtttt cagaagtccg
    18901 gtcaactcgc cggttttgcc aagataacgg gctttgattt gttctagagc gttgaagtct
    18961 tgcgcagctt ctactgcggc aatgccttct gcaacgatgc ggtttacatt ttccataata
    19021 tcaagtctgt caattaatga tatgccacct gaaacaacga ggccgcctgt atagcctgac
    19081 atatcagact cttcagacga ccttattttc ttcacggtca atccattgga taaattttct
    19141 gtatagtgga ttaaatttaa accagtacgg cgttgcctcg ccttgccgta ctatccgtac
    19201 tgtctgcggc ttcgtcgctt tgtcctgatt taaatttaat ccactatatt ttaacgcaaa
    19261 tttatttaaa aaaatagact ttaaagaaag aaaatcaatc acatagaatt tctgcaaaca
    19321 aagaaaaaag gaagccgcag cttccttttc aattttttgg attaagcagc caaagcagat
    19381 ttggcttttt caaccaattg tgcaaaagcg gctttatcga acacggccaa atcagccaat
    19441 actttgcggt cgatttcaat agaggcgcgt ttcagaccgt tcataaattt gctgtaagac
    19501 aacccgtttt cacgcgcacc tgcattgata cggacaatcc acaattgacg gaattggcgt
    19561 ttgcgttggc ggcggtcgcg gtatgcgtat tggccggctt tcattaccgc ctgcttggca
    19621 acgcggtaaa cgtttttacg acgaccgcgg tagcctttgg ctaacgcgaa gattttttgg
    19681 tgacgggcac gggcggtaac accgcgtttt acgcgtggca tattctaaac tccttaagcg
    19741 tagggtaaca ttttagcaac agaagccaaa tcgcgatcat ttaccataga ggtaccgcgc
    19801 agttggcgtt tgtttttggt ggtcttttta gtcaagatgt ggcgtttgaa cgcatgagcg
    19861 cgtttcacac cgccgttacc cagtacttta aagcgttttt tcgcgctaga cttggttttc
    19921 attttaggca tgggaaaact ccattcgtta tcggataagg cattaggggg ttttaaaaca
    19981 tcggtttcaa acacttgaac ccacaatgcc acggtttttt gccgcaatta aaaacttact
    20041 ccgaagcggc gatcggagta agcggagaat tatagcttta ttttttcttc ggcgcaatca
    20101 tcatcaccat ttggcgacct tccattttgg gaaaggactc gatttgcgcc acttcagcca
    20161 aatcttcttt tacacgttcc aaaagttgcg cgccgagttg ctggtgagcc atttcacggc
    20221 cgcgaaaacg caatgtcact ttgactttat cgccgtcggc aaggaagcgg ttaatgttgc
    20281 gcatcttgat ttgataatcg ccctcatccg tacccggacg gaatttgatt tccttgattt
    20341 gcacctgctt ttgatttttc ttggcttcgt cgcgcttctt ggcttgttgg tatttgtatt
    20401 taccgtaatc catcagtttg cacacaggcg gtttagcagt tggggaaatc tctaccaaat
    20461 cgacatcctg cccttcggcc atagccaaag cttcacgaac tgaaacgaca ccaagctgtt
    20521 cgcctgactc actgattaaa cgcacttctt tggcggtaat ttcgccgttg attcgtgctt
    20581 cgcgttcttg agcgatgatg aatactccta taaaaattaa tgattgacga gggcatcagt
    20641 gatttcttgc tgcaattgcg caatgaaatc atccaaatcc aaagaaccca aatcttctgc
    20701 tttgcggcgt accgccactt tgttttcctg cttttcttta tcgccgacaa cgatttgata
    20761 aggaaaacgg tattggctgt tgtcgcggat tttgtaaccg attttttcgt tacgcaaatc
    20821 caactcggcg cggaatcctg ccgcctgcaa tttggcagcc acttcacggc agtaatccgc
    20881 ttgattttcg gtgatattca taatcaccat ttgaaccggc gccagccata acgggaaaga
    20941 gcctgcatgg ttctcaatca gaatgccgat aaaccgctcc aaagaaccca aaatggcgcg
    21001 gtgcaacatt acagggcgag cgcggtcatt gttttcggtt acatattctg catccaagcg
    21061 ttccggtaag acgaaatcta gttgcaatgt accgcattgc caagaacgac ccaaggcatc
    21121 tttgacgtga tattcgattt taggcccgta aaacgcacct tcgccaggca actcttccca
    21181 ctctacgcca caagcggtca atgcatcacg caagccttgt tcggccttat cccaaacttc
    21241 gtcagaacct gcacgttgtt cagggcggag ggacaacttc acagcaacat catggaaacc
    21301 gaactgtttg tagatgcgaa ccaacaattc attgaatgcg cgcgcttcgc tgacgatttg
    21361 gtcttcggta cagaaaatat gcgcatcatc ttgcacaaaa ccgcgaacac gcatcagacc
    21421 atgcaatgca ccgcttggtt cattgcggtg gcaagaaccg aactcggcca aacgcatcgg
    21481 caaatcgcga tatgagcgca aaccgttatt aaaaatttgc acatgacccg gacagttcat
    21541 cggtttcacc gcgtattcgc gtttttctga actggtcacg aacatattgt ctttgtagtt
    21601 gtcccaatgg ccggattttt cccaaaaggt tttatccata atttgaggcg ttttgacctc
    21661 tttataaccg gcggcgttca gctctttacg catatgctgt tcaatcactt gccacaaagc
    21721 ccagccttta ggatgccaaa acaccatgcc cggcgcttcg tcttgcagat ggaacagatc
    21781 caattgcttg ccaagtttgc ggtggtcgcg cttttcggct tcttcgatac gttgaatata
    21841 ggcttttaat tcgtcttttg tcgcccaagc cgtaccgtat atgcgttgca gcatttcatt
    21901 attgctgtcg ccgcgccagt atgcgcccgc caacttggtc agtttgaagt ttttcaggaa
    21961 acgggtattc ggaacgtgcg gtccgcggca catatcgaca tattcctgat gatgatacat
    22021 ccccatcgct tccacttcgg gcatatcgtc aatcaggcgc agtttgtatt cttcgccgcg
    22081 ctcttgaaaa attttaatcg cctccgcacg cggagtcatg attttgacca catcatagtc
    22141 ttgggcaatc aattctttca tacgcgcttc aatggcggca acatcttccg gtgtaaacgg
    22201 tttttccgtg gcgatgtcgt aataaaagcc ctcttcaatg acggggccga taaccatttt
    22261 tgcattagga tagagttgct tgacggcatg cccgacaaga tgggcgcagg aatggcggat
    22321 gatttcgatg ccttcctgat ctttcggagt aatgatttga acagcagaat tttcaacaat
    22381 cgggtcgcac gcatcgacca atttgccgtt taccctgcct gccaccgccg ccctcgccaa
    22441 accgacaccg atagacgcag caatttgagc cacggtaacg ggggattcgt attggcggac
    22501 tgagccgtcc ggcaaggtaa tgttcaacat caaacgctcc gaaagattaa aaaataacgg
    22561 cataaatgcc gttatgggaa tttggtaggc acgattggat tcgaaccaac gacccccacc
    22621 atgtcaaggt ggtgctctaa ccaactgagc tacgtgcctt caaagaattt ttgcatttta
    22681 tcgggtcgtt ttaatttttg caagaggtat gtgcatttct ttatgcaaca ttgtggcaag
    22741 atttggggat gtcgtctgaa aaaccgtggg aattcattta taatgccgtc ttttaaaaca
    22801 tatttcgacc cctgtcgccc aactgacatt caatcttatg cttaaattta ccttacacaa
    22861 aaaagacgga tacgcccgac gcggcacgct ggagttgaac cacggcaaaa tcgaaacgcc
    22921 ggtatttatg cctgtcggta cttacggctc ggttaaggcg atgaacccgc aaaacctgca
    22981 cgacatcaag gcgcaaatta ttttgggcaa cacttatcat ttgtggctgc gtccgggctt
    23041 ggaggtcgtc gaacagtttg gagggcttca cggctttatc ggctgggaca aaccgattct
    23101 gaccgactcg ggcggttttc aggttttttc tttgtcggat atgcgcaagc tgacggaaga
    23161 aggctgtacg ttcaaaagcc cgatcaacgg cgacaagctg tttttatcgc ctgaaatttc
    23221 catgaaaatc caaacggttt tgaactcgga catcgcgatg cagctggacg aatgcacgcc
    23281 gggcgaagca acgcgcgaac aggcgaaaaa atcgctgcaa atgagcctgc gctgggcgga
    23341 acggagcaaa aaagcctttg aagatttgaa aaacccgaac gcgctgttcg gcatcgtgca
    23401 aggcgcgatg tatgaggatt tgcgcgaaga atcgctgcgc ggtttggaac agtttgattt
    23461 tcccggcctt gccgtcggcg gtttgtccgt cggcgaaccc aagcccgaaa tgtaccgtat
    23521 gctgcgcgcc gtcggtccga ttctgccgga acacaagccg cattacctga tgggcgtagg
    23581 cacgccggaa gacctcgtgt acggcgtggc acacggcatc gatatgttcg actgcgtgat
    23641 gcccacccgc aatgcacgca acggctggct gtttacccgt ttcggcgatt tgaaaatcaa
    23701 aaacgccaaa cacaagctcg acaagcgtcc gatagacgaa agctgcacct gctacgcctg
    23761 ccaaaacttc agccgcgcct acctgcacca tctgcaccgc accggcgaaa tcttgggcgc
    23821 acagttgaac accatccaca atctgcattt ctaccaagtc attatggcgg aaatgcgcga
    23881 agccgtcgaa caaggcaaat ttgccgactg gcaggcgcga ttccacgaaa accgcgcacg
    23941 cggcacagac tgattccctg caatgccgtc tgaagccgct tcagacggca ttttgccgct
    24001 ttaccctacc cgcactattt ttcagaaacc gatcatgctt ccattctttc cagaaccctc
    24061 cctttcctat acgcaacaaa accgtaccgc cgttttgctg ttgaacctcg gcacgcccga
    24121 cgcgccgacc gcgcaggcgg tacgacctta tctgaagtcc tttctgaccg accggcgcgt
    24181 cgtcgaactg cccaaatggc tgtggtatcc cattctgcat ggtctggtac tgacgctccg
    24241 ccccaaaaaa agcgcgcacg cctatgaaaa aatctggttt aaggaaggtt cgcccttaga
    24301 agtttacaca gcacgccaag ctgccgcgct tgccaaacgt atgcccgacc tcatcgtccg
    24361 ccacgccatg acctacggca atccttcggt ggcagacgta ttgtcggaac tgaaggcgca
    24421 aggcgcgggc agactgctgg tcatcccgat gtacccgcaa tatgccgctt ccagcagcgg
    24481 agcggcagta gataaggtgt gcgaacaatt actgctgcaa cggaaccaaa tgagcgtccg
    24541 caccgtttcg cgcttttatg acgataccgg ctacattgat gcgatgaaaa accacatcct
    24601 ccgatattgg gcggaacacg ggcgcgggaa aaaactgatg ttgagttttc acggcgtacc
    24661 gcagaagcac cacgacctcg gcgaccccta tcccgacgag tgccgccaca ccgccaaact
    24721 gcttgccgaa gcactggaac tgaccgaaga ccaatatgtc gtatcgttcc aaagccaatt
    24781 cggcagggca aaatgggtta caccgagcac gcaggatttg ttcggcaaac tgcccaaaca
    24841 gggggtaacc gagctggacg tattttgccc gggctttttg gcagactgtt tggaaaccat
    24901 ggaagaaatc gccctgatgg ggcgggaaca gttttacgaa gcaggcggca aaagctaccg
    24961 ctacatcccc tgcctcaacg acaaccccga ctggatagac gcactcgtcg cacttgccga
    25021 agaaaacctt ggcggctggc gttgaaactg tttgacccat gtctaaaatg ccgtctgaac
    25081 gccgtgttca gacggcattt tcccgctact ttagcgtatg atggcatcta tgccggacaa
    25141 caacatcaag tgcaacctta ctaccgattc ggcaaaaaaa tctttcaccc gctacgcaaa
    25201 atcaacaaca aggtttcaaa cattaaggaa acaccaatga acacaacccg actgccgacc
    25261 gccctcgtct tgggctgcct ctgcgccgcc gcttctgccg ccgacaacag catcatgaca
    25321 aaagggcaaa aagtgtacga atccaactgc gtcgcctgcc acggcaaaaa gggcgaaggc
    25381 cgcggaacca tgtttccgcc gctctaccgc tccgacttca tcatgaaaaa accgcaggtg
    25441 ctgctgcaca gcatggtcaa aggcatcaac ggtacaatca aagtcaacgg caaaacctac
    25501 aacggattca tgcccgcaac cgccatcagc gatgcggaca ttgccgccgt cgccacttat
    25561 atcatgaacg cctttgacaa cggcggcgga agcgttaccg aaaaagacgt aaaacaggca
    25621 aaaggcaaaa aaaactaaac agacaaaatg ccgtctgaaa ccggcaatcc ggcttcagac
    25681 ggcattcaaa tcaaaccttt ctaacgcggt actttcagcc ccatagaccc gatattgccg
    25741 tccccgtcaa cctccttcgc ggtcagcata aagccgccga tgtcaatacg gccgcactcg
    25801 accggctcct gactgtcgga acgcttatcg aaaagctcgg caaggctcaa accctcttcg
    25861 cccgcttcca gcctcaaacc gtaagcaagt gccaaatcac ccgaacgtgc tgccggcaaa
    25921 acgacaaact caccgaagaa atcaaaatac tcacggacgc taatacccgt ctcggtaaag
    25981 tatttcgcca ttttatagtg aa
//
LOCUS       DAXHKG010000012        23650 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.012, whole genome shotgun sequence.
ACCESSION   DAXHKG010000012 DAXHKG010000000
VERSION     DAXHKG010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.012"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..801
                     /locus_tag="ACFMWP_000392"
     CDS             <1..801
                     /locus_tag="ACFMWP_000392"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5891053.1"
                     /translation="RTPNIKYIYQDNQGLSEARNTGIKNSNGKYIVFIDSDDFINCQV
                     LLDFLSKDDIDMPDVVFLNAVKYDKGSVSYFGEDYQPEKILNQSKVEVLKGLCRFRKF
                     PGSAWNKIIKRELIIKEKLFFEKGIYSEDVEWSMRLFNAATTFSYLDGCYYYYRQGRE
                     DSITGTVSEKSIKSLLYILEKNAEMEFNRDISSYLYSFLSYEYLVLLFIMTSKNIACD
                     ADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            842..1372
                     /locus_tag="ACFMWP_000393"
     CDS             842..1372
                     /locus_tag="ACFMWP_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HFC5891054.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLAGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1389..1520)
                     /locus_tag="ACFMWP_000394"
     CDS             complement(1389..1520)
                     /locus_tag="ACFMWP_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HFC5891055.1"
                     /translation="MPSKPEKRASDGIFACNSNADGQNQGASDTVIGHLVRVNLGLT"
     gene            complement(1539..3134)
                     /locus_tag="ACFMWP_000395"
     CDS             complement(1539..3134)
                     /locus_tag="ACFMWP_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HFC5891056.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMEIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIEWAPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3241..3636)
                     /gene="hisI"
                     /locus_tag="ACFMWP_000396"
     CDS             complement(3241..3636)
                     /gene="hisI"
                     /locus_tag="ACFMWP_000396"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HFC5891057.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRILMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGSAWETADAVLKDEKEIYGSTH"
     gene            complement(3667..4434)
                     /gene="hisF"
                     /locus_tag="ACFMWP_000397"
     CDS             complement(3667..4434)
                     /gene="hisF"
                     /locus_tag="ACFMWP_000397"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HFC5891058.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTCPDLINEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(4447..5184)
                     /gene="hisA"
                     /locus_tag="ACFMWP_000398"
     CDS             complement(4447..5184)
                     /gene="hisA"
                     /locus_tag="ACFMWP_000398"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HFC5891059.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5217..5855)
                     /gene="hisH"
                     /locus_tag="ACFMWP_000399"
     CDS             complement(5217..5855)
                     /gene="hisH"
                     /locus_tag="ACFMWP_000399"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HFC5891060.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGCRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(5986..7488)
                     /gene="pta"
                     /locus_tag="ACFMWP_000400"
     CDS             complement(5986..7488)
                     /gene="pta"
                     /locus_tag="ACFMWP_000400"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HFC5891061.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7673..8731)
                     /gene="fbpC"
                     /locus_tag="ACFMWP_000401"
     CDS             complement(7673..8731)
                     /gene="fbpC"
                     /locus_tag="ACFMWP_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HFC5891062.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8752..10269)
                     /gene="fbpB"
                     /locus_tag="ACFMWP_000402"
     CDS             complement(8752..10269)
                     /gene="fbpB"
                     /locus_tag="ACFMWP_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HFC5891063.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10337..11332)
                     /gene="fbpA"
                     /locus_tag="ACFMWP_000403"
     CDS             complement(10337..11332)
                     /gene="fbpA"
                     /locus_tag="ACFMWP_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HFC5891064.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(11583..12053)
                     /locus_tag="ACFMWP_000404"
     CDS             complement(11583..12053)
                     /locus_tag="ACFMWP_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HFC5891065.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGSILQFVCNWSFPAAEKTCSVLKKIGAVHSAMLIHRAADALGKEIRHLQS
                     EGKNLKEMWDITQHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(12111..13487)
                     /gene="argH"
                     /locus_tag="ACFMWP_000405"
     CDS             complement(12111..13487)
                     /gene="argH"
                     /locus_tag="ACFMWP_000405"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HFC5891066.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRCRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(13506..14375)
                     /gene="galU"
                     /locus_tag="ACFMWP_000406"
     CDS             complement(13506..14375)
                     /gene="galU"
                     /locus_tag="ACFMWP_000406"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFC5891067.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMIEVYERSGNSILGV
                     ETVEPSQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(14403..15002)
                     /gene="rdgB"
                     /locus_tag="ACFMWP_000407"
     CDS             complement(14403..15002)
                     /gene="rdgB"
                     /locus_tag="ACFMWP_000407"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HFC5891068.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELVGKADKSCCYVCVLVFVLHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALAELLRKLAL"
     gene            complement(14995..15228)
                     /locus_tag="ACFMWP_000408"
     CDS             complement(14995..15228)
                     /locus_tag="ACFMWP_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HFC5891069.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFFFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(15336..15869)
                     /locus_tag="ACFMWP_000409"
     CDS             complement(15336..15869)
                     /locus_tag="ACFMWP_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HFC5891070.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLADLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(15971..16429)
                     /gene="nudB"
                     /locus_tag="ACFMWP_000410"
     CDS             complement(15971..16429)
                     /gene="nudB"
                     /locus_tag="ACFMWP_000410"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HFC5891071.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16640..16716
                     /locus_tag="ACFMWP_000411"
     tRNA            16640..16716
                     /locus_tag="ACFMWP_000411"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16674..16676,aa:Pro,seq:ggg)
     gene            16874..18700
                     /gene="mafB"
                     /locus_tag="ACFMWP_000412"
     CDS             16874..18700
                     /gene="mafB"
                     /locus_tag="ACFMWP_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HFC5891072.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGKIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VSDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            18703..19167
                     /locus_tag="ACFMWP_000413"
     CDS             18703..19167
                     /locus_tag="ACFMWP_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891073.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            19392..19538
                     /locus_tag="ACFMWP_000414"
     CDS             19392..19538
                     /locus_tag="ACFMWP_000414"
                     /inference="COORDINATES: protein motif:HMM:NF012755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891074.1"
                     /translation="MWYEANIGLINTMSRSNQAGTRLLYSNYGLLYITTDHYISATRF
                     VAWK"
     gene            19550..19837
                     /locus_tag="ACFMWP_000415"
     CDS             19550..19837
                     /locus_tag="ACFMWP_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HFC5891075.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            20351..21589
                     /locus_tag="ACFMWP_000416"
     CDS             20351..21589
                     /locus_tag="ACFMWP_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HFC5891076.1"
                     /translation="MIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEALKKDKQ
                     TARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKESLYYLN
                     KHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGSCAETFG
                     LGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEYVQFSID
                     LFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAH
                     AQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVE
                     IKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSK
                     SGIKIEGFTEPNRTAYPIYE"
     gene            21620..22039
                     /locus_tag="ACFMWP_000417"
     CDS             21620..22039
                     /locus_tag="ACFMWP_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891077.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            22129..22200
                     /locus_tag="ACFMWP_000418"
                     /pseudo
     CDS             22129..22200
                     /locus_tag="ACFMWP_000418"
                     /inference="COORDINATES: protein motif:HMM:NF026862.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            22197..22439
                     /gene="imm31"
                     /locus_tag="ACFMWP_000419"
     CDS             22197..22439
                     /gene="imm31"
                     /locus_tag="ACFMWP_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HFC5891078.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            22517..22762
                     /locus_tag="ACFMWP_000420"
     CDS             22517..22762
                     /locus_tag="ACFMWP_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC5891079.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            22765..23154
                     /locus_tag="ACFMWP_000421"
     CDS             22765..23154
                     /locus_tag="ACFMWP_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891080.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSYSLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            23264..23644
                     /locus_tag="ACFMWP_000422"
     CDS             23264..23644
                     /locus_tag="ACFMWP_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891081.1"
                     /translation="MTKEQGQDLSFATYCLLSAAINLQEFKLWLEKVVLDMPIDNIPF
                     YIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALTGIAFLRGIDVYDPPVSKEKALK
                     ALKKHPEIYQRFQHFFPFVELPPL"
BASE COUNT         5711 a         5285 c         6672 g         5982 t
ORIGIN      
        1 cggacaccaa atatcaaata tatatatcag gataaccaag gattgtcaga ggcgagaaat
       61 accggaataa aaaattcaaa cggaaaatat atagtcttta ttgattcgga tgattttatt
      121 aattgtcagg tcttgctgga ttttcttagt aaagatgata ttgatatgcc ggatgtggtt
      181 tttttaaatg cagttaaata tgataaggga agtgtttcat attttggcga agattatcag
      241 cctgaaaaaa tactcaatca atccaaagtc gaagttttga aaggattatg ccgatttaga
      301 aaatttccgg gttcggcgtg gaataagatt ataaaaagag aattgattat taaagaaaaa
      361 ctgttttttg aaaagggaat ttattctgaa gatgtcgaat ggtcaatgag attatttaat
      421 gcggcaacaa ctttttctta tttggacggt tgttattact attatcggca gggaagagaa
      481 gattctatta cgggaactgt ttcggaaaaa agtataaagt cattattata tattttggag
      541 aaaaatgcgg aaatggaatt taatagggat atatcaagtt atctttattc ttttctttcc
      601 tacgaatatc tcgttttgct ttttatcatg acgagtaaaa atatagcgtg tgatgctgat
      661 ataaaaagaa gggcgtatca tttaaggttt atgctgttaa agtccaataa attgatatat
      721 aagctgatat tcccgataat cacattattc ggggttgata ttacaggcag gattttaaaa
      781 gcaatcaggg ggaatattta ataaatcctt taacactata catcttaccg aaggaggaaa
      841 aatgaacgca atccgaactt tccaaaaccg cacgcccgaa atccacgaaa gctgtatgat
      901 agacgaagcg tgcgtcgtca tcggcgaagt gtcgcttgcc gaagacgttt ccgtgtggcc
      961 gtgcgccgtg ttgcgcggcg atgtgaacag catcaccgtc ggcgcgcgca gcaatataca
     1021 ggacggcagc gtcctgcacg tttcccacaa aaccgccgcc aaacccgaag ggtcgccgct
     1081 ggttatcggc gaagacgtta ccgtggggca caaagtgatg ctgcacggct gccgtatcgg
     1141 caaccgcgtc ctggtcggca tggggacgac ggttctggac gatgccgtga ttgaggacga
     1201 agtgatgatc ggcgcgggca gcctcgttcc gccgcgcaaa cgtttggcgg gcggctacct
     1261 ttatgtcggt tcgccggtca gacaagtgcg cgtgctgacc gatgaggaaa aagccttttt
     1321 gaaatattcc gccgcgcatt atgtgaagct gtcgaaacag tacgggatgt gaaatcacat
     1381 cggcgttcct acgtcagccc caaattcacg cggacgagat gcccgataac ggtatccgat
     1441 gcgccttgat tttgaccgtc tgcgtttgag ttgcaggcaa aaatgccgtc tgaagccctt
     1501 ttttcgggtt tagacggcat tttattgccg attgtttttt aaagtttgac cgaatgttcg
     1561 cgcgtttcgt ggaacacgat gtccggccaa cgttcttgcg tcaaccccaa attcacgcgg
     1621 ttgggggcga ggtaggcgag gttgccgccc gcgtcgatgg cgaggttgcc cgcgttggct
     1681 ttttcaaact ccgccagttt tttcttgtcg tcgcacgata cccagcgcgc cgaccagatg
     1741 gatgcgctgt cgaacacggc ttctacgccg tattcgttgg cgaggcgcga ggttacgact
     1801 tcaaactgca acacgccgac cgcacccaaa atcaaatccg cgccgctcat cggtttgaac
     1861 acctgtaccg cgccttcttc gccaagctgt tgcaaacctt tttgcagttg cttgattttc
     1921 agcgggtttt tgatgcggac gctgcggaac agttcgggcg cgaagaaggg aatgcctgta
     1981 aatgccagtt gttcgccttc ggagaagctg tcgccgattt ggatgttgcc gtggttcggg
     2041 atgccgataa tgtcgccggc gtaggcttct tcaaccagct cgcggtcgtg ggacatgaag
     2101 gttaccacgc tggaggcggc gatttcgcgg ttgatacgca ggtgtttcat tttcatgccg
     2161 cgctcgaatt tgccggagca gacgcgcaag aaggcaatac ggtcgcggtg tttcgggtcc
     2221 atattggctt ggattttgaa gataaatccg gaaaacttcg gctcgtccgg ctcgaccata
     2281 cgcacggtcg catcgcgtgg tttcggcgcg ggcgcccatt caatcaatga attgaggatt
     2341 tcctgaatac cgaagttgtt aatcgcagag ccgaagaata cgggcgtgag ttcgccggcg
     2401 aggaattcgt cgagattgaa ctcgttggaa gccgcctgca ccaattcgat ttcgtcgcgc
     2461 aactgttgga tttccaatgg aaagcgttgt tccaattcgg gattgtctat gcctttgatg
     2521 atgtcgaact cgtgcggcag gcgttcgccg cccgcttcaa agagatagat ttcgtcgttc
     2581 aggatgtggt atacgccttt gaagtttttg cccataccga tcggccaagt aacgggcgcg
     2641 cagcggattt gcaggatgtt ttccacttcg tccaagagtt ccagcgaatc gcgcacttcg
     2701 cggtcgtatt tgttcataaa cgtaacaatc ggcgtatcgc gcaggcggca gacgtttaag
     2761 agcttgatgg tttgcgcttc cacacctttt gccgcgtcaa tcaccattaa tgcgctgtcc
     2821 acggcggtta aaacgcggta ggtgtcttcg gagaagtctt ggtgtcccgg cgtgtccaag
     2881 aggttgacgg tgtggtcttt atagtcgaac tgcatcacgc ttgatgccac ggaaatgccg
     2941 cgctgcttct cgatttccat ccagtcggaa gtggcgaatt tgccggtttt tttgcctttt
     3001 accgtacccg cgctttgaat cgcgcctgaa aacagcaaga gtttttcggt tagcgtggtt
     3061 ttacccgcgt cagggtggga gatgatggca aacgtgcggc ggcggcgcac ttggtcgagg
     3121 atttcttggg acatggtttt ctttgcaaaa aggttcaggc cgcttttcag acggcccgga
     3181 cagtgtttga gacggcgaaa ttgtacaaaa aaatgcctga taattcaatg ttggaggcgg
     3241 tcagtgcgtg ctgccgtaaa tctctttttc gtctttcagg acggcatcgg cggtttccca
     3301 cgcgctgcca cgccagactt tgtaaaagca gctttctcgc ccggtgtggc aggcgatgcc
     3361 gccgttttgg gcgatgagca tcacaatggc gtcgccgtcg cagtcgaggc gcagttcgcg
     3421 gactttttgc gtgtgtcccg actcttcgcc cttcatccat tgtttttggc gcgaacggct
     3481 gtaatagtgg gcaaagccgg tttcgacggt tttttgcagg gcttcggcgt tcatccacgc
     3541 caccattaaa atacgtttgg tttcggcatc ttgggcgatg gcgcaaacca aacctttttc
     3601 gtcaaatttg acggcttcaa gcaggttttt atccatattt cctttcagac ggcatggtcg
     3661 gggcggtcag aggcgcactt cgatgccggc ttcgcgcata gcgcgtttgg cttcgcggat
     3721 ggcgatttcc ccgaaatgga aaacgccggc ggcaagtacg gcatcggctt tgccttcggt
     3781 tatgccttca atcaggtgcc ggacattgcc gaccccgccg gaggcgatga cggggatgtc
     3841 gacggcttcg gcaacggcgc gggtcagcgg caggttgaaa ccctgtttcg taccgtccct
     3901 gtccataccg gtaagcagga tttcgcccgc gccgcgtttt tgcatttcga tcgcccattc
     3961 caccgcatcc aaaccggtcg gattgcgccc gccgtgggta aagatttccc agcgtgtgtt
     4021 ttcggggttg acggctttgg catcgacggc ggcgacgatg gcttgcgaac cgaaaaatcc
     4081 ggcggcttcg ttaattaaat cgggacaggt aacggcggcg gtgttgatgc tgactttgtc
     4141 cgcgccggca ttgagcaggc ggcggatgtc ggcaacggtg cgtacgccgc cgccgacggt
     4201 cagcgggatg aagacttgtc cggcaacctc ttcgatgatg tgcaggatgg tgtcgcggtt
     4261 gtcggatgag gcggtgatgt cgaggaaggt caattcgtcc gcgccttcgc cgttgtagcg
     4321 tttggcggct tcgacggggt cgcccgcgtc gcgcaaaccg atgaagttca cgcctttgac
     4381 gacgcgtccg tcttttacgt cgagacaggg gatgatgcgt tttgccagtg ccataatcgg
     4441 atgcctttag tcgagggaat ctgccagttg ctgcgcttgg gcaaaatcga tgctgccctc
     4501 gtaaatcgcg cggccggtaa tcgcgcctgc tacgccatgt ttttcggcgg cacacagggc
     4561 gcggatgtcg tccaagccgg tcagtccgcc ggaggcgatg acgggaatgc ggacggcttg
     4621 ggcgagtttg accgtcgcgt cgatgttcac gccgctcatc ataccgtcgc gcccgatgtc
     4681 ggtgtagatg atgctgttga cgccgtcgtc ttcaaagcgt tttgccaaat caattacatg
     4741 atgcccggtt acggttgccc agccgtcgat ggcggccata ccgtctttgg catccagccc
     4801 gacaataatc ctgccgggga aggctttgca cgcctcgcgc acgaagtcgg ggtttttgac
     4861 cgccgccgtg ccgataatca cgtcgttcag acccaaatcc aaatattgtc cgatggtttt
     4921 caaatcgcgt atgccgccgc cgagctgtac ggggatgtct ttggcgacgg cggcaaggat
     4981 gtctttgatg gcgggcaggt tttgcggaac gccggcaaac gcgccgttca aatctaccag
     5041 atgcaggcgg cgcgcgcctt gtttgaacca gtgcagtgcg gtttcggcgg gcgaatcgga
     5101 aaagacggtc gcctcttcca tcagcccttg tctcaggcgg acgcagcgtc cttctttcaa
     5161 atcgatggcg ggtatcagca gcataatttt tctccttgtg cggggccgtg tccggcttac
     5221 cagtttaaaa agtttttcaa catcgtcagc ccggcatcgt ggcttttttc ggtgtgaaat
     5281 tgcgtggcga atacgttgtc tttgccgacg atgcaggcaa acggggacgg gtagtcgctt
     5341 tcgcccaata tggtttcggg attttcgggg gcgaaatagt agctgtggac gaagtaaaaa
     5401 cgcgtgtctt ggggaatatc tttaaacagc gggtggtttt gggtttggcg cacggtgttc
     5461 cagcccatat gcgggacttt cagacggcat ccctgcgggt cgcggaggtc gcgctcaaag
     5521 cgtctgactt tgccgccgaa ccagcccaag ccgtcggtgt ttccttcttc actgtggtcg
     5581 aataaaagtt gcgcgccgac gcagattccg aaaaagggtt tgttttttaa ggcatctttg
     5641 actgcctcgt ccaggccgcc gcgcgtcagt gccgccatac agtcgggcat cgcgccctgc
     5701 ccgggaaaaa tgactttgtc ggcgcgggac acgcgttcgg ggtcgccgct taaaaagatt
     5761 tcggtatttt ttccggcaag ctgccccgcc gtccggacgg atttcaatac ggaatgcagg
     5821 ttgcccatac cgtaatcgat aatggcgatt tgcatggctt cctcctcttt ttttgcaata
     5881 tggctgcgat tttaacaaac aaatgtgccg tgctgataaa aatgccgtct gaaaacggga
     5941 gtctgtcttc agacggcata gggtttaaac ccggaaagcc gtttgtcagc cttccatttg
     6001 ttttgcctga acggcagtca gggcgatggt gaacacgatg tcttccacca gcgcgccgcg
     6061 ggagaggtcg ttgaccggtt tgcgcaggcc ttgcagcagc gggccgacgc ttaagacgtt
     6121 ggcactgcgt tggacggctt tataggtgca gttgccggtg ttcaggtcgg ggaagaccaa
     6181 aacggttgcc tgtcctgcca ccgggctgcc cggagctttg gatttgccca cacccggcac
     6241 ggttgccgca tcatattgca gcgggccgtc gatggcgagg tcggggcgtt tttcccgggc
     6301 aagtttggtt gcttcgatga cggtatcgac atcggggccg ctgccggagt tgacggtgga
     6361 gtaggaaatc atcgccactt tcgggtcgat gccgaaggct tttgcggaat cggcagactg
     6421 gatggcgatg tcggcaagct gttgcgcggt cgggttcgga ttaaccgcgc agtcgccgaa
     6481 gacgaggact tggttgggca gcagcataaa gaatacgctg gacacgaggc ttgcgcccgg
     6541 tgcggtttta atcagttgca aagcggggcg gatggtgttg gcggtggtgt gaaccgcacc
     6601 ggataccaaa ccgtccacat cattttgcgc catcatcatc gtaccgagta ccacggtgtc
     6661 ttgcagttgc ttgcgcgcgt cttcgggtgt caggcctttg gatttgcgca gttcgcacat
     6721 cggctcgacg tattgttcga ccaatgaggc gggatcgatg atttccaaag agtcgggcag
     6781 gctgatgccg cgttctttgg caacggcttc gacttcttcg cgtttggcaa gcaggacgca
     6841 gcgggcaatg cctttttcgt ggcagatggc ggcggcttgg acggtgcggg gttctgcgcc
     6901 ctcaggcagg acgatgcgtt tgtcggcttg gcgggcgaag tcgatcaggt tgtagcggaa
     6961 ttgcgccggc gacaggcgtt ttgcttcgcg gcctgccaat acggatacgt ctttcagcgc
     7021 gtcgctcgaa ccgaagaagg tcaggccggt tttttcggct gccgcttcgg caacggaggc
     7081 tgccgcgccg tccacgacaa aaccttccaa tacgcccggc gcggcggcga agaactgttt
     7141 ggcaaggttc agccgatttg ccagttcgtc ggcatcggcg ttgtcggaac ggacggcgaa
     7201 gacggctgcc gcgtcaaggg acaatgccag ttcgacgttt ttgcctgcga ggtagatttt
     7261 gtcggcatcg ggcgcgatgc cttcgatgac gaggttggcg gcatcgagtg cggcaacttt
     7321 gccgaccagt gcgtcgaacc agtcgtcgct tttgccttgc gcgagcaggg tttcggcggt
     7381 tgcgtcaacg gcttggaaaa tttgtgcgtc cagtgctttt gcaaaggctt gtgcggcggc
     7441 ggaggcgtcc agtccggcag atacgggtac gatgagtact tttgccatga tatatccttt
     7501 cgtatgctgc ggtgtgcggc atatgtggtt ggaaggggcg gcatataggc agaaacggct
     7561 gcctgcgtgc cgtgcgtgcc gtgtttggct tgaggcgcgc aggttgaata tagcaaacaa
     7621 attctgtttc caacaagata aatatccgca ggcttgtgga tgctgccgcc tttcagaggg
     7681 tatttccggg gaagaacagg gcgggaccgt ccaaatggag gacggcggaa atgccgtctg
     7741 acagggtggg ggcggaaggg aggttgagcg tgaggacggt ttgtccgacc cggagactga
     7801 tttcggtatg ccgcgctttg ggcgtggttt tgagaaccac ggcgtgaatg gaggcggtgg
     7861 gtgcggaatg ggggtgaagg ctgaactgtt ccggacggat gagcagtgtg ccgcgtgtgc
     7921 ctgcgggtgc gccgctttga acgggcaggc ggcccaatcc gcaatcggcg gtgccgtcgg
     7981 cgttgagcgc ggcggggaac acgatgcctt cgccgataaa cagggcggca tcaaggtcgg
     8041 caggttgtcg gtacaattcg tgagggcttg cagtttggag gatgcgcccc tgtttcatca
     8101 cggcaatccg gtcggcgtat tgcagggctt cttcgcggtc gtggctgacg aaaacggcag
     8161 atttgccgtt ggcgcgcagg gcggcaatca tgtcttcgcg aatctggcgg cgcaactgtt
     8221 cgtccagcgc gctgaagggt tcgtccaaca aaatcagttc gggatcgggt gcgagggcgc
     8281 gggcgagggc gacgcgctgt tgctgtccgc ccgaaagttc gtgcggatag cgtccggcaa
     8341 gttcggaaat gccggtcaat tccaacatag cttcgatgcg ctgccgctct tgcgccgtct
     8401 tgcctttgcc gttgcccagc ccgtaggcgg tgttgcggta aacggtcagg tgggggaaca
     8461 gtacgccttc ctgtacgaca taacccaaac ggcgttcgcg gacggggagg ttggtatttt
     8521 tcgagaagat ggttctgccg gaaagcgaaa tttcgccaaa atcgggttgt tcaaaaccgg
     8581 caaggcagcg taaaagggtg gttttgccgc agccggacgc gccgacgata aagaggattt
     8641 cgcccgggtc gaggctgagc gaaatgtcgt ttaaaaccgg ggtgttttga aaacttttgg
     8701 acaggtgtcc gatgtgcagg gcggcggtca tggcggtact tcctcaagct gttatttgaa
     8761 ggcgtatttc ttcagcagga atacggggat gccggaaaat aataccagca tcagcgcgta
     8821 aggggtggcg gcggcgtatt gtgcgtccga tgtgtattcc caaacggcgg tggagagtgt
     8881 gtggacatcg tcggtggtca gcagcagggt ggcggtcagc tctttcatca gtttgaggaa
     8941 gacgagtgcg aatgcggcgg taatgccggg caggatggac ggcagtacca acgtcctgaa
     9001 aataaagaag tgtccgcgcc ccaatgttgc gccgacctgt tccatccctt tggggagttg
     9061 ttccaaggaa gtcctcaggg tggtttgcgc catcggcagg taaagcatga aataggcaag
     9121 gatgacgacg ataaaggttt ggtaaacggc aggggtgtag ttgatgctga aataaaccaa
     9181 ggatagggcg ataaccaaac cggggacggc gtgcagtaaa aacggcagcc tgtctatcca
     9241 aacggttaaa aaattgcgat agcgaaccga tgcccaaaca aggggcaagg cacataatat
     9301 agtcaaaatc gcacctaaag ccgatacgct taaggaacgg ataaaggcat caaatacgga
     9361 tacgagcgcg aatgtgccgg aagtgccgac catcatccaa tgtatcaata cgccaaaggg
     9421 gataataatg cccaaagtca acaagctgct taaaaaaaca atcgcgccaa tctgaccggg
     9481 cagtttgagg gttttgacgg gataaggacg ggcaacgcct ttgccgctgt ggtaaatctt
     9541 ggctttgccg cgaaatatgc tttctccaaa tacgacgatg ccgcacaccg ccattaaaac
     9601 agcggaaagc agggcggcgg tattgttgtt gtaggacatt tcgtattctt ggaaaatggc
     9661 ggtggtaaaa gtggggtagt tcaaaataga taccgcgcca aattcgacca gcatatgcag
     9721 ggcaatcagt aacacgctgc tgccgatggc gggtttgagc tgggggagga tggcggaaaa
     9781 aaaggtttgc aggcggcttt tgcccaagga caggctgact tcttcgtaag acaggctgat
     9841 gcgtttgagt gccgcctcga cgggcaggta ggcgagcggg aacgaggaca ggctcataat
     9901 catcactgtc ccccaaaagc cttcgacacg gaaggtcagg ctgatccagg tgaaacagct
     9961 gacaaatgcg gggatgcaca aaggcagggt gattgccgtc tgaaaaaagg ttttgccgaa
    10021 gaagcggtaa cgttggaaca aaagggcgca ggcaatgccc aaaacaatgg aaatcagggt
    10081 aacgcccgcc atcatcgtca aggtgttgga gagcaaatcc cacatacgcg ggcggaacaa
    10141 cagttcgacg gcgcggttga tgccgacctg ccacgaacgc atagcgacat ataaaaaagg
    10201 cagggtaagc ggtagggcaa tcagtaggat gaggccggta agccaaatgg gtattttttt
    10261 aggagacata gtgtttttta tcggcaaaac gggcggacag tataaatgtc cacccgtttg
    10321 acaatccgaa aacggcttat ttcataccgg cttgctcaag cagccgggtg gcgtgttctt
    10381 tttcggaaac agtggtggcg gacacttggg gtgcttccaa cttggcgatg ggttccaaat
    10441 tgaaagtgga taccacgtgc ggattcaaag gatattcggc acggacggcg gtcagggcgc
    10501 gctgtccttc cttgctggcg aggaaggcga cgaatttttt cgcctcatcc ttgttttggg
    10561 aggattttaa cacggctgcg ccggaatagg taacgagtgc gccgggatct ctgtggcgga
    10621 cgaaattcag gcgggtgtgg acattttgta cgcctttttc acgcgcaaaa gcgtgccagt
    10681 agtagttgtt gatgagggcg gcatcgattt cgccgttttc aaccgcttga agggcgacgg
    10741 agtttttagc gtaaggcttg ccgtattctt tcagaccttt gagccatttc aatgcggccg
    10801 cttcgccttt cagtttgacg atggcgacaa cctgttccaa gaacgcgccg gaagtggggg
    10861 cgtaaccgat gcggtttttc catttcggcg tggcgtaatt caggacggat ttttccaaat
    10921 ctttttcaga cagtttgcgg gtgtcgtaaa cgacgacgcg cgaacgtccg ctcagtgcca
    10981 cccagtcttt tttggcggca accggcacgc ccttgccgcg tgtttcgttg atggtggagg
    11041 cgggcagggg ctctaggagg ttggctgcgg aaagggtggc gagtgccggg atttgttcgg
    11101 aatagaatac gtcggcgggg cttcggctgc cttcttcttt gatttgaccg gcaagctggt
    11161 cgcctttggc gctgttgagt ttgactttga tgccggtagc ccgggtaaag gcatctgcaa
    11221 cggcttgtgc cgcttctttg tgttggccgt tgtacacggt aatgtctgcc agcgcggggg
    11281 ttgcggcggt cagggctgcg gcaagcagtg cgtatcggat agatgttttc atatcgattt
    11341 tctcctaatg aatgagagtg tacaccttgt taagacataa cggcgtgtag tgtattcctt
    11401 cttctttata aatgcaaata attatttttt aaatttgtta ttatccgatc cggttatggt
    11461 ttgttctgac ttgtattttt tccgtgcatc gcgcccgtaa ggcggaagcg gcgggcaatg
    11521 cgtggcggaa tgtgggtaaa ggcggcattt tgatttgtcg gaatgcttga gaacccctct
    11581 ctttaaaaca gcgtctgaac agggttgccg gaatagtatt gccatcccgg cagatacagt
    11641 ttgtcggggt cttgccaata ttgttcatcc agactgttcg gcagtgaggc ggttttgttg
    11701 tcgagatgtt gcgttatatc ccacatttct ttcaggtttt taccttccga ttggaggtgg
    11761 cggatttctt ttcccaatgc gtctgccgcc cgatggatca gcattgcgct gtgtaccgcg
    11821 ccgatttttt tcagaacgga acaagtcttt tcggcggcgg ggaaactcca gttgcagaca
    11881 aattgcagta tgctgccgtt accgatatcg gcttctgtcc gccaaatcaa aaccagctcc
    11941 tgttcccgcc cgtccatgct ttcgagtttg ccgtcatgct gttcaaaaag tttgtccacc
    12001 gcctgccaca tcatctgttc gaagcggtcg gcttgggtat ccgtatcggt catcgtgttc
    12061 ttgcctttta aaaatgccgt ctgaacattt cttcagacgg catttggggg ttaagccaac
    12121 atttcccgcc agcgtttcac ttggaagcgg acttgttccg gcgcggtacc gcccaagtgg
    12181 ttgcgggcgt ttaagctgcc ttcgggtgtc agcacgccgt aaacgtcgtc ggcaatcaaa
    12241 tcgctgaaac cttgtaagac ttcgagcggc agttcgctca aatcgacgcc cgcttggtcg
    12301 gcgtggcgca cggcttgggc gacgacttcg tgggcatcgc ggaaaggcat gccttttttg
    12361 accagataat ccgccaagtc ggtggcggta gcgaagccct gcatcacggc ggcgcgcata
    12421 ttgtcgggtt tgacggttac gccgcgcatc atatcggcgt aaatccgcaa cgtgtcgata
    12481 agcgtgtcgg cggtgtcgaa caagggttct ttgtcttcct gattgtcttt gttgtacgcc
    12541 aagggttggg atttcatcag ggtaatcaga ccgataaggt gtccgatgac gcggccggat
    12601 ttgccgcgca cgagttcggg cacgtcgggg tttttcttct gcggcatgat ggacgaacct
    12661 gtgcagaaac ggtcggcgat gtcgataaag ccgaaacgcg ggctcatcca caaaatcaat
    12721 tcttcagaca ggcggctcag gtgaaccata accagcgagg cggcggctgt gaactcaatg
    12781 gcgaaatcgc ggtcggatac ggcatcgagc gagttctggc agatttgttc aaagcccaat
    12841 agctcggcgg tgatttcgcg ctgaatcggg taggtcgtcc cggcaagggc ggctgcgccg
    12901 agcggcatac ggttgacgcg gcagcggcag tccgccatcc gttcgttatc gcgtccgagc
    12961 atttcgacgt aggcgagcat atggtgtccg aagctgacgg gctgggcgac ttgcaggtgg
    13021 gtaaagcctg gcatgacggt ttcggcgttt tgttccgcca aatccagcaa tgccgtctga
    13081 aggctttgaa tcaggctttg tataacggta atctggtcgc gcagccacag gcggatgtcg
    13141 gtggcgactt ggtcgttgcg gctgcggccg gtgtgcaggc gtttgcccgc gtcgccgatt
    13201 ttgtcggtca ggcggcgttc gatgttcata tggacatctt ccaaatcgga cgaccattcg
    13261 attttgccgc tgcggatttc ttcgaggatt tccgccatac cccggcggat gtccgccaaa
    13321 tcgccttcgt ccaacacgcc ggtttctttc agcatttgcg cgtgtgccag cgagccttgg
    13381 atgtcccatt cggcaagccg tcggtcgaaa ccgatggagg cggtgtattg tttgacgagt
    13441 tcggaaacgg gttcgttgaa acgtccggac caggttttgt cgtgcataag gattccttga
    13501 tggggttatt cggtgcggta tttttccaaa agccggcgga agggttcgcc ggtttcggga
    13561 tgtttcagac cgtaggcgac ggtggcttcg aggtagccca gtttgctgcc gcagtcgtag
    13621 cgcgtacctt caaaggggtg cgccaggaca aattcgtgat cgagcagctt ggcgatgccg
    13681 tctgtaagct ggatttcgtt gcccgcgccg cgcggaagat tggttaagag gtcgaaaatg
    13741 cgcggggtga ggatgtagcg tccaacaacg gcaaggttgg agggcgcgtc ttcgggcttg
    13801 ggtttttcga caatgccgat aatgcgttgg aactgtttga gctgttcggt ttcgacgatg
    13861 ccgtatgagc cggtttgcga cggttcgacg gtttctacgc ccaaaatgct gttgccgctg
    13921 cgttcgtaca cttcaatcat ttgtttgagc gcgccttttg gggcatcgat taaatcgtca
    13981 gccaaaatca cggcaaaggg ttcgtcgccg atggcggcgc gggcgcacaa gacggcgtgt
    14041 cccaagccca gtgcttccgc ctgacggatg tagaggcagg taatgttcgg cggcaggatg
    14101 ttgcggacgt gttccaacaa tttgtcttta tggcgcattt ccaactcggt ttcgagttcg
    14161 tatgccttgt cgaaatggtc ttcgatgctg cgtttgttgc gtccggtaac aaacaccatt
    14221 tccgtgcagc cggcttccac ggcttcttct acggcgtatt ggatcagcgg cttgtcgacg
    14281 atgggcagca tttctttcgg gcttgccttg gtggcgggca ggaagcgtgt tcccatccct
    14341 gcgacgggga aaacggcttt ccgtatgggt ttcattcttt ttcctttgta ttgttttgat
    14401 gtttaaaggg cgagtttgcg taagagttcg gcaagtgcct gcgcgcggtg gctttcgcgg
    14461 tttttgacct ccgaatccaa ttcggcggcg gttttgccgt gtccgggcag ataaaaatac
    14521 gggtcgtaac cgaaaccgtt ttcaccggcg ggaacgccgt tccattgtcc gtgccatacg
    14581 ccttcggcaa taatcggacg cgggtcgtct ttatggagga caaaaaccaa tacgcagacg
    14641 tagcaacagc ttttgtcggc tttgccgaca agttcggcgg caagtttcag gttgttggcg
    14701 gtatcggatt tgggattgtc gcccgcgtaa cgtgcggaat ggatgcccgg cgcgccgttt
    14761 agggcggcgg cacagatgcc gctgtcgtcg gcaagcgcgg gcagcccgct gtattcggcg
    14821 gcatggcgtg cttttgccag cgcgttttcg acaaaggtgg gatagggttc ggggcattcg
    14881 ggtatgccga atgcggattg cggcaatacg gtgatgctgt aaggtttgaa taagttgccg
    14941 aattcttcga gcttgccggc attgccgctt gccaaaacga ttttttccgg tttttcagac
    15001 atagcggttt tcctttgcgg cggattgggc ggcgcgtagg gatttgtgcc gcaggtagag
    15061 ggcgaggctg ccgatttgtc cgaacagtgc gccgaatgcg aaaaaaaagg aggcgacggc
    15121 gaaggctttg ctgccgacgg tcagcagata agcacccaag aggacgagca gcataaatgc
    15181 cagtgtgaag agggcaacag acaacagata gatttttcgg cggttcatgg cgttcggtcg
    15241 gaaacggtat gttcggatta tagccgattg ggacggtatt ccctagagct tggaaaaatg
    15301 ccgtctgaag cggcgttcag acggcaggga gagcgttatg cctgtttgtt ccaacgttcg
    15361 atggattctt tgatgacttt tttcgcttct tccgcatcgc cccacgattc gactttggtc
    15421 gtacccgctt ttttcaggtc tttgtagtgg ttgaagtgga actcgatttg tttgatgagc
    15481 tgttgcggca aatctgccaa agttttgtag gcgttgccgt tgttgcggtc gtcggcagga
    15541 acgcagacga ttttgtcgtc cacttcgccg tcgtcaacga atttcatcac gccgataacg
    15601 cgcgcttcca agaatacgcc ggttgccaaa ggttgttcgg taacgagcag cacgtccaat
    15661 tcgtcgccgt cttcgtccaa agtttgggga atgaagccgt agttggtcgg tttggcgaag
    15721 atggcgggtt cgacgcggtc gagttggaat gcggcgagtt tgcggttcca ctcgattttg
    15781 tggttgctgc cggcggggat ttcgttgacg acgttgatga tgccgccgtc cacatcgccg
    15841 ggggtcagga tttggttgaa gtctgccatt tggtttcctt tgtttgggaa agtttgaagt
    15901 ttgaaagtat agcacaaacg tccggctgaa aatgcgcccg atgccgtctg aaagggtgta
    15961 cgggcgcgtg ttaccgtttg cccaaaaacc tgcccagttc cagaatcgcg cgcctgttgg
    16021 acggggaaaa cactttttcc gccgcttctt ccaagccgaa ccagccgtag gagacgtgtt
    16081 cttcgggttg cagggcgatg ggcgtatcac gcgggatttc ggcagagaag aggtgttcgc
    16141 ggttttcaaa cacgcctttt ggatagcggt gccgccagtg gtggtagatt tcgtaaaccg
    16201 tgctgtcgtg ccagtcttga agctgcccgt ccgccagcag gatgccggtt tcttcccaaa
    16261 cttcgcgcct tgccgtttgg gcgacggttt cgcccggttc gaggctgccg gttaccgact
    16321 gccaaaatcc ttccggatgc gtgcgttcga tgagcaggat gccgccgtcc ccgctataaa
    16381 ggacgaccag tgcggaaacg gggtatttga gcggttttgc catcggcatc tttcggcggg
    16441 ctgcggtaat gaaggggcgg attatagcaa acgccgcacg ttatggcgtt tatccttttc
    16501 cgtatccttt tttctgcacg gatgggacgc gccggtgttt gccggtaaat tttccgttgt
    16561 gtcaaaaaga taagggcggt tgtgatttta atgcttgcca aagcgtcggg cggaaactat
    16621 aatccgaaac ttatcgagtc ggagtgtggc gcagtctggt agcgcacttg catggggtgc
    16681 aaggggtcga aggttcgaat cctttcactc cgaccaaaaa ttccgaaagc cgctttcaaa
    16741 agcggctttt ttgccgtccg tatgattatg atgtagagta cgcggcgaca gacattcaaa
    16801 tgccgtctga aaaccgttca gatggcatct ctttatctta gtttcattcc gtaccatctt
    16861 aaggaacatc aaattgggca tttcccgcaa aatatccctt attctgtcca tactggcagt
    16921 gtgcctgccg atgcatgcac acgcctcaga tttggcaaac gattctttta tccggcaggt
    16981 tctcgaccgt cagcatttcg aacccgacgg gaaataccac ctattcggca gcagggggga
    17041 acttgccgag cgcagcggtc atatcggatt gggaaaaata caaagccatc agttgggcaa
    17101 cctgatgatt caacaggcgg ccattaaagg aaatatcggc tacattgtcc gcttttccga
    17161 tcacgggcac gaagtccatt cccccttcga caaccatgcc tcacattccg attctgacga
    17221 agccggtagt cccgttgacg gatttagcct ttaccgcatc cattgggacg gatacgaaca
    17281 ccatcccgct gacggctatg acgggccaca gggcggcggc tatcccgctc ccaaaggcgc
    17341 gagggatata tacagctacg acataaaagg cgttgcccaa aatatccgcc tcaacctgac
    17401 cgacaaccgc agcaccggac aacggcttgc cgaccgtttc cacaatgccg gtagtatgct
    17461 gacgcaagga gtaggcgacg gattcaaacg cgccacccga tacagccccg agctggacag
    17521 atcgggcaat gccgccgaag ccttcaacgg cactgcagat atcgtcaaaa acatcatcgg
    17581 cgcggcagga gaaattgtcg gcgcaggcga tgccgtgcag ggtataagcg aaggctcaaa
    17641 cattgctgtc atgcacggct tgggtctgct ttccaccgaa aacaagatgg cgcgcatcaa
    17701 cgatttggca gatatggcgc aactcaaaga ctatgccgca gcagccatcc gcgattgggc
    17761 agtccaaaac cccaatgccg cacaaggcat agaagccgtc agcaatatct ttacggcagt
    17821 catccccgtc aaagggattg gagctgttcg gggaaaatac ggcttgggcg gcatcacggc
    17881 acatcctgtc aagcggtcgc agatgggcgc gatcgcattg ccgaaaggga aatccgccgt
    17941 cagcgacaat tttgccgatg cggcatacgc caaatacccg tccccttacc attcccgaaa
    18001 tatccgttca aacttggagc agcgttacgg caaagaaaac atcacctcct caaccgtgcc
    18061 gccgtcaaac ggcaaaaatg tcaaactggc agaccaacgc cacccgaaga caggcgtacc
    18121 gtttgacggt aaagggtttc cgaattttga gaagcacgtg aaatatgata cgaagctcga
    18181 tattcaagaa ttatcggggg gcggtatacc taaggctaag cctgtgtctg atgcaaaacc
    18241 gagatgggag gttgatagga agcttaataa attgacaact cgtgagcagg tggagaaaaa
    18301 tgttcaggaa ataaggaacg gtaataaaaa cagtaacttt agccaacatg ctcaactaga
    18361 gagggaaatt aataaactaa aatctgccga tgaaattaat tttgcagatg gaatgggaaa
    18421 atttaccgat agcatgaatg acaaggcttt tagtaggctt gtgaaatcag ttaaagagaa
    18481 tggcttcaca aatccagttg tggagtacgt tgaaataaat ggaaaagcat atatcgtaag
    18541 aggaaataat agggtttttg ctgcagaata ccttggcagg atacatgaat taaaatttaa
    18601 aaaagttgac tttcctgttc ctaatactag ttggaaaaat cctactgatg tcttgaatga
    18661 atcaggtaat gttaagagac ctcgttatag gagtaaataa aaatggcaat ttggaattat
    18721 cggtactacc ttatcccatc agctgctatc agaaataaat ttaatgcaaa taaagatatc
    18781 atacttgatg agtatcgatc taatggtttt cagaatttta atgagaataa aagttttgaa
    18841 aattacttta tcgataatga tgttatatta ttatcaataa taaatgaagc aaaaaaacag
    18901 cttaaattga aagaatcttg ggataaagac gcaatcatgt tttgtgataa ttttggtaat
    18961 agtcttaccg tttggccaga tgatatagag tgcgaacttg atttaagatt tgattatact
    19021 aaatttattc agaaaaccat tgattgggca ataaaatata attgtctact tgtaatagaa
    19081 aaaacaggaa atgtagtttc ccctaatata aataatctga tgtatgaaat aaaagcatat
    19141 ttggaaagca agccgtggcc catatgaaac ctaaactcaa caagtaggat gtgtgcggaa
    19201 cgcacgtatg cggttctcaa ggtttgagct aagaggccgt ctgaaaacag aaaaactgtt
    19261 tcagacgacc tttcttttaa ccagttgcca cagcaaccgg acaaaagcag cctacctcca
    19321 catccatata ggcaatacag gggagatatt ttgtaaattc tacgaatatt ttacctgcta
    19381 aacagggtag gatatggtat gaagcgaaca ttggcttaat aaacactatg tcaagatcga
    19441 atcaggctgg tactagattg ttgtattcca attatggatt gctatatata acaactgatc
    19501 attatatctc tgcaacacgg tttgtagctt ggaaatagga gtataactta tgcaattaga
    19561 gattatcggt agtaaaattt atacggaaca agattttcat aatcaaattt caaaaatatt
    19621 ttctatacaa gattattatg ggaacaatct tgatgcttta tgggatttat taagcacaaa
    19681 tgtagaacga ccgattactt tggtatggaa agatgctatg ttctcaaaaa atcaattaga
    19741 aaatatattt attgaaatcg taaatgttct agaaagagtt aagaaacaag atgaggatta
    19801 tggattcgaa gaaaaattta attatatttt agagtaagta aaccctaatt acattacgta
    19861 cacaggctta aaactcccca gagccaatta agcaagccgt aacccatata aaacttaaac
    19921 tcaacaagta gcatgtgtgc ggaacgtacg catgcggttc ttaaagtttg agctaagagg
    19981 ccgtctaaaa acagaaaaac cgtttcagac ggtctttgtt taacgccacc gatccagcgg
    20041 gttacaaagc gcagtcaatg ccgctgcgcc ttatgcctcc gaagcaatag gcagaacatt
    20101 tggacacggt gaaaacaaaa acgaaaccgc ccaagccgtc ggacatttcc ttttaggagc
    20161 agctattgcc cgcgtcaacg gtggtaattt tgctgccggc ggctcggcag cagttgcagc
    20221 tgaaaaggcg gcggaacatc ttgcccaaca gtataacgac ggtaaaaccg caatcgatcc
    20281 gcaaacaggc gagttcaatg ccaacctgct gccggaacat atcaaagagg aaatcaaatc
    20341 aaagagcggg gtgattgcat cgctgacggg cgcggccgtg ggcggcacgc cggtagatgc
    20401 gcaaaccgga ggtgcggtcg gacagaatgc ggtggaaaac aacctctatc tgacatcgga
    20461 agccttaaag aaggacaagc agacagctcg taaaatttat tccgtcataa aagagcaagt
    20521 caagcatgaa tgcagttcca caggaagaat taccgaatgt cgtcaaaata taggacgcat
    20581 tatcgaattt acccaagaca aacgctttga cagtaggttt aaggacttaa aaaaagaatc
    20641 cttatattac ctaaataaac atcctgattt agtagcctct tatttgaagg ctgaatacga
    20701 aaagctggat agggaagaca aaagtatcct gcaccgctac atctcacccg gggctgaaat
    20761 cgtttcgggc agtttggggg ttgttctttc aggagtagcc ggaggcggat cttgtgccga
    20821 gactttcggc ttaggctgtg ccgccgcttt ggttggtgta acgtcttcct acgatcatgt
    20881 cattactggg acgaaaaact tcggaaaaaa agccagcgag caacgaccga cgattgcggt
    20941 tcaggccttg aagcagttgg ggctgtcgga gcaggctgcg gaatatgttc agttctctat
    21001 agatttgttc agtgtgggta aatcgggggg cggtatacct aaggctaagc ctgtgtttga
    21061 tgcgaaaccg agatgggagg ttgataggaa gcttaataaa ttgacaactc gtgagcaggt
    21121 ggagaaaaat gttcaggaaa cgagaagaag gagtcagagt agtcagttta aagcccatgc
    21181 gcaacgagaa tgggaaaata aaacagggtt agattttaat cattttatag gtggtgatat
    21241 caataagaaa ggcacagtaa caggagggca tagtctaacc cgtggtgatg tacgggtgat
    21301 acaacaaacc tcggcacctg ataaacatgg ggtttatcaa gcgacagtgg aaattaaaaa
    21361 gcctgatgga agttgggagg tgaaaacgaa aaaaggtggg aaagtgatga ccaagcacac
    21421 catgttccca aaagattggg atgaggctag aattagggct gaagttactt cggcttggga
    21481 aagtagaata atgcttaagg ataataaatg gcagggtaca agtaaatcgg gtattaaaat
    21541 agaaggattt accgaaccta atagaacagc atatcccatt tatgaatagt aatatttatg
    21601 aaaaattagg agattaatga tgaaaagaat taagtgcttt tgtgataaat ttccatcagg
    21661 agatacattt agaatgtgta tcattctgga tgactatgat aatagggttg attattatgt
    21721 aggaatatat gattacatta cgtctacctt aatgagcgat atttactatc gatccacgat
    21781 tgatgagcat ttcaagatta tagaattaat agaaaataat ccaaatgaaa tttatgatga
    21841 tggcggtggt caacaatttt gcctagaatt tcatcatgat aaggtcattt tttaccacaa
    21901 tgaatttgat gaagaagatg gttatccagt attaagctgt tcgctgcata cttttaaaac
    21961 tgctttaatt gcttggaatg cttttttgca attgcctaaa agtattcatt cggtggtgga
    22021 gactgtgatt gaggaataag cataattagc ttaatgaata gaatcagcga tatagattgg
    22081 actgcaaatc cacgcttata cgctgtgcca tgattaacag gaagagagca acttggatgg
    22141 gctagtaggg atggtaagca tttaaatata tcaattgatg gaaagattac acacaaatga
    22201 ctaatttaaa attagatttc tactctgaag ttattataaa agattcttgc cctaatgatt
    22261 tgttagaaaa tggtgagact attaaaggaa aaaaaggagt ggtattaggt ataagcgaag
    22321 aagatggtat aatctatggc tatactattt tactttttga tataaaatat tgtatatata
    22381 tagataagaa atatattata ccgactggaa aaaaattctc tcgcgatgat ttttattagc
    22441 taatttaagt aatttaagca agttttttag atactgaaac tggtaattat gtttatgtaa
    22501 gcataaggag ttcagattga aggattctac agggcaaatg aggctggcaa ccaaggattt
    22561 ggcggaagcc attaaacgag gagaagtacg tagttctgct tttacaacaa agcaactaaa
    22621 ggcaatcgaa aaaggagaat ctaaaatacc ggattacact tggcatcatc atcaagacac
    22681 tggaaggatg caattgatta atgaagactt gcatcatgat accggccata tcggttggag
    22741 agcgatgagt aaaggaaagt aactatgtgg aaaatcataa aagaggatag tgatgattta
    22801 ggatttgcaa ttaaatgctt attctctcaa tctattgatt taaatgaatt caagttatgg
    22861 attgaacaag taatacgcga tatgcccatc gaggacatcc ctttttatat ttttgacttg
    22921 gcggattttg atgggggaat tgccgatatt gacaatattg taggttttgt ttcgagttac
    22981 agcctatcaa aatcgaaaaa aaatgccttg acaggcattg ccttcttaag ggggatagat
    23041 gtctatgatc cgcctatttc aaaagaaaaa gcattaaaag ccttaaagaa acatcctgaa
    23101 atttatcaga agtttcagca tttctttccg tttgtagaac tgcccccgct ttaaacagtc
    23161 aaaatgccgt ctgaaatgat attcggcttt cagacggcat ttttgacaca aagcaggtaa
    23221 ccaaaagagc gtttgacggc aaaggaagat aattatgtga aaaattacga aagagcaagg
    23281 tcaagattta agttttgcaa catattgctt attatcggca gcaattaatt tgcaagaatt
    23341 taaattatgg ttggagaagg ttgtcttaga tatgcctatt gataatatac ctttttatat
    23401 ttttgattta attgatctta aagaaggagt aggagatatt tataatattt tggattttgt
    23461 tccgaattca gacttatcta aagaccaaga tgacgcatta acaggcattg ccttcttaag
    23521 ggggatagat gtctatgacc ctcccgtttc aaaagaaaaa gcattaaaag ccttaaagaa
    23581 acatcctgaa atttatcaga ggtttcagca tttctttccg tttgtagaac tgcccccgct
    23641 ttaaacagtc
//
LOCUS       DAXHKG010000013        23627 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.013, whole genome shotgun sequence.
ACCESSION   DAXHKG010000013 DAXHKG010000000
VERSION     DAXHKG010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23627
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.013"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(67..906)
                     /locus_tag="ACFMWP_000423"
     CDS             complement(67..906)
                     /locus_tag="ACFMWP_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HFC5891082.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1191..1266
                     /locus_tag="ACFMWP_000424"
     tRNA            1191..1266
                     /locus_tag="ACFMWP_000424"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1224..1226,aa:Arg,seq:ccg)
     gene            complement(1331..2524)
                     /locus_tag="ACFMWP_000425"
     CDS             complement(1331..2524)
                     /locus_tag="ACFMWP_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HFC5891083.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVSRAETARAATPVPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEACAYVSDPTWDNHRGIFESAGFEVGTYPYYDPAAVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2530..3633)
                     /gene="trmA"
                     /locus_tag="ACFMWP_000426"
     CDS             complement(2530..3633)
                     /gene="trmA"
                     /locus_tag="ACFMWP_000426"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HFC5891084.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFEAASEAVNRLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDNEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSVSAAQWNIEANRIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRTNLDTLAETH
                     TVERAALFDQFPFTHHIESGVLLKKKILGKSKR"
     gene            3776..4876
                     /gene="aroC"
                     /locus_tag="ACFMWP_000427"
     CDS             3776..4876
                     /gene="aroC"
                     /locus_tag="ACFMWP_000427"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HFC5891085.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRRETDQVEILSGVFKGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEATNVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHAGGI
                     LGGISTGQNICVNIAIKPTSSIATPRRSIDINGDPVELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            4968..5393
                     /locus_tag="ACFMWP_000428"
     CDS             4968..5393
                     /locus_tag="ACFMWP_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HFC5891086.1"
                     /translation="MIQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLITALPQYDPTLIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5467..7452)
                     /gene="parE"
                     /locus_tag="ACFMWP_000429"
     CDS             complement(5467..7452)
                     /gene="parE"
                     /locus_tag="ACFMWP_000429"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HFC5891087.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7519..8043)
                     /locus_tag="ACFMWP_000430"
     CDS             complement(7519..8043)
                     /locus_tag="ACFMWP_000430"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HFC5891088.1"
                     /translation="MLDREGYRPNVGIILTNNRDEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLSQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQLSGNR"
     gene            8208..9503
                     /gene="serS"
                     /locus_tag="ACFMWP_000431"
     CDS             8208..9503
                     /gene="serS"
                     /locus_tag="ACFMWP_000431"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HFC5891089.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLEAVQKELDAWL
                     LSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9581..10579)
                     /locus_tag="ACFMWP_000432"
     CDS             complement(9581..10579)
                     /locus_tag="ACFMWP_000432"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HFC5891090.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAHDPFCNPEAEKIGGRYVDLDELYAQSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10704..11780)
                     /gene="prfA"
                     /locus_tag="ACFMWP_000433"
     CDS             complement(10704..11780)
                     /gene="prfA"
                     /locus_tag="ACFMWP_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HFC5891091.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11870..12640)
                     /locus_tag="ACFMWP_000434"
     CDS             complement(11870..12640)
                     /locus_tag="ACFMWP_000434"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC5891092.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATRPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLETMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILRIAEIAAQIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12643..13635)
                     /locus_tag="ACFMWP_000435"
     CDS             complement(12643..13635)
                     /locus_tag="ACFMWP_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HFC5891093.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDAADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGADEVKHELQRLGLV"
     gene            complement(13702..14385)
                     /locus_tag="ACFMWP_000436"
     CDS             complement(13702..14385)
                     /locus_tag="ACFMWP_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC5891094.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14575..15909)
                     /gene="glmM"
                     /locus_tag="ACFMWP_000437"
     CDS             complement(14575..15909)
                     /gene="glmM"
                     /locus_tag="ACFMWP_000437"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HFC5891095.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEVELEIEAKIDGEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVVDTANGAGYGVAPKVFHELGAQVVSIGNEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGQVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIQKGQQWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWAREGAERIAAAIGGI"
     gene            complement(16039..16896)
                     /gene="folP"
                     /locus_tag="ACFMWP_000438"
     CDS             complement(16039..16896)
                     /gene="folP"
                     /locus_tag="ACFMWP_000438"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HFC5891096.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGVYSQNAQTA
                     LAHAEQLLKEGADILDIGGESTRSGADYVSPEEEWARVEPVLAEVAGWGVPISLDTRR
                     TVIMEKALALGGIDIINDVAALNDEGAVELLARQADTGICLMHMQGLPKTMQINPKYQ
                     DVVGEVARYLKARSAECIAAGIAPQRIILDPGFGSGFGKPLQHNIALMRHLPELMAET
                     GFPLLIGVSRKSTIGELTGEANAAERVHGSVAAALASVARGAQIVRVHDVKATADALK
                     VWEALGINL"
     gene            complement(17036..17929)
                     /locus_tag="ACFMWP_000439"
     CDS             complement(17036..17929)
                     /locus_tag="ACFMWP_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HFC5891097.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADERRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGNLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLNHTKGHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18020..20134
                     /locus_tag="ACFMWP_000440"
     CDS             18020..20134
                     /locus_tag="ACFMWP_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HFC5891098.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20199..21677)
                     /gene="ubiD"
                     /locus_tag="ACFMWP_000441"
     CDS             complement(20199..21677)
                     /gene="ubiD"
                     /locus_tag="ACFMWP_000441"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HFC5891099.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(21697..22212)
                     /locus_tag="ACFMWP_000442"
     CDS             complement(21697..22212)
                     /locus_tag="ACFMWP_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HFC5891100.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPYPYNQLSEEERIAYQAECGGDF
                     CIIRYPDQTDRFIRAVLLIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYETDTFGLHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22219..22653)
                     /locus_tag="ACFMWP_000443"
     CDS             complement(22219..22653)
                     /locus_tag="ACFMWP_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891101.1"
                     /translation="MCGLWLLRALTAKLPQQRYAALFITLFFAAVLVFGRHDSMYWYP
                     VLVNLMMLAVFGGSLFAGQTVIEKLARLQQPDLPEKAVRYTRRVTQVWCVFFIANGTL
                     AALLARLGRYDWWAVYTGVIAYVLMGMPFAGEWLYRKLVLKV"
     gene            complement(22934..23017)
                     /locus_tag="ACFMWP_000444"
                     /pseudo
     CDS             complement(22934..23017)
                     /locus_tag="ACFMWP_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            complement(23020..23520)
                     /locus_tag="ACFMWP_000445"
                     /pseudo
     CDS             complement(23020..23520)
                     /locus_tag="ACFMWP_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            23560..>23627
                     /locus_tag="ACFMWP_000446"
     CDS             23560..>23627
                     /locus_tag="ACFMWP_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5891102.1"
                     /translation="MLPSKYEDNTLQIKEKSTERTAP"
BASE COUNT         5351 a         6755 c         6178 g         5343 t
ORIGIN      
        1 attcccataa aaaaacggag cagatacctg ccccgttttt atttaatccg aaattttaat
       61 ctaaatttag aattttgcac cggattggtt tgccatatag tcaacagccg ctttgacttc
      121 gtcatcgctc aaaccggcat tgccgccttt ggccggcatc gcgttaaagc cttcaagggc
      181 gtgtttgtgc aaggtttctt tgcctttttt gatacgcggt gcccaatcgt cttttttgcc
      241 tatgccggga ataccgggaa tcgaaccgcc gtggcacacc tgacaggttg cttcgaagac
      301 ttttttaccg tcaacgccga ccgcaggggc tgccgcaccc ttgtcttctg ccttcgcttc
      361 tgccggagct gcactatcgg caggagcaga agctgttcct gaagcggcat tgtcggcagg
      421 cgcagcctca tcaggattcg ggaaagaacc gccgcttttg ttcgccatgt aagtaatcgc
      481 ccgtttgagt tcctgatcgg tcaggtctgc cgcaccgcct ttggcaggca tggcgttaaa
      541 gccgttcagc gcgtgttgga acaaggtatc gaagccttgc gcgatacgcg gtgcccaatc
      601 gccgttgtgt tccagtttcg gagcgttcgg cacattgctg tccgccgcgt ggcattggat
      661 acagattttg ccgaaaatct gttcgccttg gcgttcgccg acggggatgc cgtcgcccat
      721 cgtcaattgt ccgacaggct ggatacgggt ctgcgttgct gcttccgtag tggcatcgac
      781 atcgccgaac gagccgctgc ccgccagctt aatcaggaaa taaaggactg caataacaat
      841 aacgataccg ctcacaaggg taaacagtgc agagccttgg gctttgttgt cgcggagttg
      901 tttcatttgg taggcctcgc cgtcaggtta ggttgtgctg taaattatag tttggtgtgt
      961 taaacgcagt taacaatatt ttgctggatt atactgaatt cacagggtct ttccaatcgc
     1021 tatcattgaa aatatgaaaa aatttgccaa cggtatctgt ataaaacaaa taatcctttg
     1081 aaaataatgg tttatcctca agaaaactct ccttatgccg ccatacgccg cctgccggcg
     1141 caagataacc tttgccaatt tgcagaattt acgttaacct tacgttttac gcacccatag
     1201 ctcagttgga agagtgtcag tttccgaagc tggaggtcac aggttcgatc cctgttgggt
     1261 gcgccaatta taaagagacc gtctgaaaga taaatatttt tcagacggtc ttttgactta
     1321 cttcaaactc ttatttcaag acttccgcaa atgcgcgggc aacatagtcg gtattcgacg
     1381 tattcagtcc ggcgacgcac atcctgccgg aatccagcag gtaaacggca aattcgtcgc
     1441 gcagcctgcg gacttgttcc acgctcaatc ctgtgtagcc gaacatgccg cgctgtttga
     1501 tgaaataagt gaaatcgcga tcggggattt gcgcagttaa gacatcataa agtttctgcc
     1561 gcatcgcacg gatgcggtcg cgcatcatat aaacctcgtt ttgccacaag gcgtaaagtt
     1621 cggggctgtt catcacgtcg gcggcgatat acgcgccgtg cgcgggcggg ctggagtaga
     1681 tgcggcggac ggtgaatttg agctgtccga acaccaaatc cgcttcttcc ttattcgggc
     1741 aaaccacgct caggccgccg acgcgctcgc cgtagagcga caggtttttt gagaaggaat
     1801 tgctgacgaa caagggcaat tccatttcca ccgctttgcg gacggcgtag gcatcgctgt
     1861 ccaaatcgcc gccgaagcct tggtaggcga tgtccataaa cggaatcagt ttgcgcgttt
     1921 tgatgatgtg caacacttcg tcccattgtt gttccgacat atccacgccg gtcgggttgt
     1981 ggcagcaggg atggaggatc aggacgctgt tttcgggcag ggtgttgaaa aacgcggtca
     2041 tttcgtcgaa tttcacgccg acggcagcag ggtcgtaata tgggtaagtg ccgacctcga
     2101 aacctgcgct ttcaaaaatg ccgcgatggt tgtcccaagt cgggtcgctg acgtaggcgc
     2161 acgcttcggg aaaccagcgg tgcagaaagt ccgccccgac tttgagcgcg cctgagccgc
     2221 ccaaggtttg tacggtaaca atacgtcctt gcgcgagcgc ggggttgtct ttgccgaaca
     2281 acaaatgctg caccgcgctg cggtaagtgt ctaagccttc catcggcagg tagggcgacg
     2341 gcacaggagt ggcggcgcgg gcggtttcgg cgcggctcac ggattccaac acgggcattt
     2401 tgccttcgtc gtcgaaataa atgcctatgc tcaaattgac tttttcgggg cgcgggtcgt
     2461 ttttgaaggt ttcgaccaaa ctcaaaatcg gatcgccggg atagtattcg atgtgtcggt
     2521 acatagtcct tacctcttgc tttttccaag gattttcttt ttcaacagca caccgctttc
     2581 aatatggtgc gtaaacggaa attgatcgaa cagggcggca cgttcaaccg tatgggtttc
     2641 cgccaaggtg tccaaattgg tacgcagcgt ttcgggattg caggaaatgt agatgatgtt
     2701 gtcaaactgc gacaccagct tcaaagtttc ctcatcgata ccggcacgcg gcggatcgac
     2761 gaaaatagtg gaaaatgcgt aatccgtcaa agcaataccg ccatccttaa ggcgtttaaa
     2821 ctcacgtttt ccggtatagg cttcggtaaa ttcttcagca gacagacggg cgattttgat
     2881 gttgccgatg cggttggctt cgatattcca ttgcgccgcg ctgacggagg ttttggagat
     2941 ttcggttgcc aaaacacgtt caaacttttc agataaagga agcgtaaagt tgccgtttcc
     3001 gcaatacagt tcgagcaaat ccccatccaa tccttctgct gcaccgcagg cccattcaag
     3061 cattttctga cacacggcgg cattcggttg ggtaaaactg ccttcaattt gccgataacg
     3121 gaaatcccgg ttgccgacct tcaaagtttc cgttacatag tcctgtttta agactatttt
     3181 ctgtcccctg ctccgcccga tgacggaaat atccaactgt tgctgtaacg cttgcgccgc
     3241 ctgcatccac tcattatcaa gccttttgtg gtaaatcatg gtaaccagca tttccccgct
     3301 gagcgtagac aaaaattcga cggcatacca acggtttctc agttcggcag attgggcggc
     3361 aacggcaatc aattctggca tcaggcggtt gacggcttcg gaagccgctt caaaacggtc
     3421 gcaacggatc aggcttgccc cgccagcctt ttgtcctttt tcaaacatgg cataaaacat
     3481 ttcaccgcct tcgtgccaaa tacggaactc ggcacgcata cggtaatgtt tgtccggaga
     3541 ttcgtacact tcccactcag gaacatccaa acctgcaaaa agggttttaa ggtggtcttt
     3601 tttatcttga agctgctgcg tgtagtcgct catatcgcta tcctgaaaaa tcagaccgga
     3661 ttataagccg attcactgca aaacacgcaa cccctttacc ggcatataac ccgttttcct
     3721 ccaactttta tgctaaaatc cgccgtctcc aacataccgc cgacagaagg aaaatatggc
     3781 aggcaacact ttcggacaac tcttcaccgt gaccacgttc ggcgaaagcc acggcgcagg
     3841 tttgggctgc atcatcgacg gctgcccgcc cggcttggaa ttaagcgaag cggatatcca
     3901 atttgacctc gaccgacgca aacccggcac cagccgccac gttacccaac gccgcgaaac
     3961 cgaccaagta gaaatcctct ccggcgtatt caaaggcaaa accaccggca cgcccatcgc
     4021 cctcttaatc cgcaataccg accagcgcag caaagactac ggcaacatcg cccaaagttt
     4081 ccgccccggc catgccgact atacctattg gcacaaatac ggcacgcgcg actaccgcgg
     4141 cggcggcagg agctccgccc gtgaaaccgc cgcccgcgtt gctgccggag ccgttgccaa
     4201 aaaatggttg aaagaaaaat tcggcacgga aatcaccgcc tacgttaccc aagtcggcga
     4261 aaaagaaatc cggtttgaag gctgcgagca catttcccaa aatccttttt tcgccgccaa
     4321 ccatagccaa atcgccgagc tggaaaacta tatggacagc gtgcgcaaat ccttggattc
     4381 cgtcggcgcg aaactgcata tcgaagcgac caacgtcccc gtcggtttgg gtgaacccgt
     4441 tttcgaccgc ctcgatgccg aaattgccta cgcgatgatg ggcatcaacg ccgtcaaagg
     4501 cgtggaaatc ggcgcaggct tcggcagcgt tgtccaacgc ggcagcgaac acggcgacga
     4561 actgaccccg caaggcttcc tgtccaacca cgccggcggc atcctcggcg gcatcagcac
     4621 cggacaaaac atctgcgtca atatcgccat caaacccacc agctccattg ccacaccgcg
     4681 ccgcagtatc gacatcaacg gcgaccccgt cgaactcgcc acccacggca ggcacgaccc
     4741 ctgcgtcgga ctgcgcgccg cccccattgc cgaagccatg ctcgcgttag tcctcatcga
     4801 ccacgctctg cgccatcgcg cgcaaaatgc cgacgttcag gttaatacgc ccgacattac
     4861 cctttcaaac aaataaaaat ttagccaaaa cacagacttt ataatagaat accaagcatt
     4921 gccgtgcagc cttgacgcac gggtttgttt agaggaatgc aactgaaatg atacaagaaa
     4981 ccgctttggg cgcagcactg aaatctgcgg tccaaaccat gagcaaaaag aaacagacag
     5041 aaatgattgc cgaccatatc tacggcaaat acgatgtatt caaacgattt aaaccgttgg
     5101 cactcggtat cgaccaagac ttgattaccg cgctgcccca atacgatcct acacttattg
     5161 cacgcgtcct cgccaaccac tgtcgccgtc cgcgctatct gaaagccttg gcgcgcggcg
     5221 gcaaacgttt cgatttgaac aaccgtttca aaggcgaagt tacccccgaa gaacaggcaa
     5281 tcgcacaaaa ccatcctttc gtgcagcagg ctttgcaaca gcagtccgcc caagctgccg
     5341 ccgaaacacc gtctgttgaa gccgaagcag ccgaatcttc cgcagcagaa taaatcccca
     5401 aacgaaatgc cgtctgaaag ccgatttggt ttcagacggc attttttcgt atgcggcaat
     5461 cacggttcaa atatcgagtt ccgccgtatc gccttcgcgt tccatccaag cgcggcgggc
     5521 ggcggcttcg cctttgccca tcagtttgac gaagatgtcg cgtgtttcgt catccgctcc
     5581 ttcggggatt tgcacctgca acaggcggcg ggtgtcgggg tgcatggtgg tgtctttgag
     5641 ctggtcgggg ttcatctcgc ccaatccttt gaaacggctg atggaatagg cggtttcttt
     5701 gacgccttct ttttgcagcc gctctaaaat gctgtcgagt tcgttttggt cgagggcata
     5761 gaatttgcgg gcaggtttgc ttttgccttg tgcgttgaca tcgacgcgga acagcggcgg
     5821 ctgggcgacg tagatgtgtc catcggcaac cagtttcggg aagtggcggt agaacagggt
     5881 cagcagcaaa acttgaatat gcgagccgtc cacgtcggca tcggacagga tggcgatttt
     5941 gccgtaacgc aggccgctta aatcgggatg gtcgttgatg ccgtgcggat cgacgccgat
     6001 ggcaactgaa atgtcgtgga tttcggcgtt gccgaagagc tggtcggggt ggacttcaaa
     6061 gctgttgagc actttgccgc gcaggggcag gatggcttgg gtggctttgt cgcgggcgag
     6121 tttggcggag ccgccggcgg aatcgccttc gacgaggaag agttcgtttt cgcggatgtc
     6181 ttcgctttcg cagtcggtca gcttaccggg caggacggcg acgccgctgc cttttttctt
     6241 ttcaatcttt ttaaccgaac gcatccgcgc ctgtgcctga cggatggcga gttcggcgat
     6301 ttttttgccg aagtccacgt tttggttcag ccacaattcc aaagggtcgc ccgatacggt
     6361 agcaacgagt ttcagcgcgt cgcggttggt cagtttgtct ttggtctgac cttggaactg
     6421 cgggtcgagg acacgggcag agaggacaaa ggcggttttg ccgaacacgt cgtcgctttg
     6481 cactttcacg ccgcgtggta aaaggttgtg cagattgatg aagttgctga cggcgttgaa
     6541 cacggcttgt ttcaagcccg cttcgtgcgt gccgcccagc ggggtgggga tgaggttgac
     6601 gtagctttcg ttggcgcacg agccttcttc cagccaggtc agggcaaacg cggcgccttc
     6661 gccgatgctg aaatcgccgt tgtggccgtc tgaaatgtag ttttcgcaag agaagatagg
     6721 cacggcttcc tgcgcgtcgg caatcaggtc ggtcagatag cttttcagac cgtcggggta
     6781 atgccaggtt tgggtgtgcg cttcgtcttc gcctttgacc ggacgggtca gggaaacgcg
     6841 cacgcccggc agcagcacgg ctttggcgcg cagcaggcgt tcgagttcgg ggatgctgta
     6901 attcgggctt tcaaaatatt tgccgtccgg ccagacgcgc acttcggtgc cgctgtcttt
     6961 gacggcgcat ttgcccactt gtgccaacgg ttcgaccacg tcgccgccgg caaacacgat
     7021 gcggtggatt ttgccttcgc gtttgaccgt tacctcaagg cgggtggaaa gggcgttggt
     7081 cacggatacg cccacgccgt gcaggccgcc tgaaaaggca tacgcgctgc cgccgtcttt
     7141 tttgttgaac ttgccgcccg cgtgcagacg ggtgaacacg agttcgacta cgggtacgcc
     7201 ttcttcaggg tgcagaccga cgggaatacc gcggccgttg tcgcgtacgg aaagcgaacc
     7261 gtcttcatga atttgcacgt cgattgccgt agcgaaaccg cccaacgcct cgtccgccgc
     7321 gttgtcgatg acttcttggc agatatgggt cgggctgtcg gtgcgggtgt acataccggg
     7381 acgttctttg accggttcca aacctttgag gacggtgatg ctggattcgc tgtattggtt
     7441 gtttttagcc ataggaataa tctgaaagta agaaaaacaa cgctttcaga cggcctgaaa
     7501 gcgttgcgtt ccgttgtttt accggttgcc ggaaagttgg cgggcggcaa agtcttcata
     7561 actttccata ccgcgcagga agcgggaaga aagttctttc aatgccccca aataaacgtc
     7621 gcgtttgaaa tcaatcactt cgtcaacggg cgcccaatat tggtgccaac gccagccgtc
     7681 aaattcgggg tggcgggtgg cgcgcaggtt gacatcgcaa tcccggccgg tcaggcgcag
     7741 gagataccaa atctgcttct gcccgcgata agagccgcgc cattcgcggc gtacccagtt
     7801 gttcggcacg tcgtaacgca gccagtcgcg cgtccgcccg acgattttga cgtgttgcga
     7861 cagaagtccg acttcttcgt aaagctcgcg gtacatcgcg gtttcggggc tttcgcccgg
     7921 cttgatgccg ccttgcggaa actgccaaga atgttcgcgc acgcgcttac cccaaaagac
     7981 ttcgtcgcgg ttgttggtta agatgatacc gacattgggg cgatagcctt ccctgtccaa
     8041 cacggtgtcg ccctccgtta aattcaatct tgggattttc ccacaaatcg aacggttttg
     8101 acaaatcaga cggtatggtt caagcatgtc gaaacacaga cggactcggg aaaatatctt
     8161 aaatttggtt tacaataatg tgtttcaaat tattcgggaa tcagaccatg ttagacatcc
     8221 aattgctccg cagcaacacc gccgccgttg ccgaacggct tgcacggcgc ggttatgact
     8281 ttgataccgc acgttttgac gcactggaag aacgacgcaa gtccgttcag gtgaaaaccg
     8341 aagaattaca agcctcgcgt aacagcattt ccaagcaaat cggcgcactg aaaggtcagg
     8401 gcaaacacga agaggcacag gcggccatgg atcaagtcgc ccaaatcaaa accgatttgg
     8461 aacaggcagc cgccgatttg gaagccgtgc aaaaggaact ggacgcatgg ctgttgagca
     8521 ttccgaacct gccgcatgag gacgtgcctt tcggtaagga tgaaaccgaa aacgtcgaag
     8581 tccgcaaagt cggcaccccg cgcgaatttg actttgaaat caaagaccat gtcgatttgg
     8641 gcgaaccttt gggtttggat ttcgaaggtg gcgcgaaact ttccggcgca cgatttaccg
     8701 tgatgcgcgg acaaatcgcc cgtctgcacc gcgccttggc acagttcatg ctggatacgc
     8761 acacgctgca acacggctac accgagcatt acacgcctta tatcgttgac gatacgacgc
     8821 tgcaaggtac gggccaacta ccaaaatttg cggaagatct gttccacgtt acccgtggcg
     8881 gcgacgaaac caaaaccacc caatacctga ttccgacagc cgaagttacc ctgaccaata
     8941 ccgttgccga cagcattatc ccgtccgaac aactgccgct gaagctgacc gcgcattcgc
     9001 cctgtttccg cagcgaggcg ggttcgtacg gcaaagacac gcgcggtctg attcgccagc
     9061 accagttcga caaagtagaa atggtacaaa tcgttcatcc cgaaaaatca tacgaagcac
     9121 tggaagaaat ggtcggccat gccgaaaaca tcctgaaggc tttggaactg ccctaccgcg
     9181 tgattaccct gtgtaccggc gacatgggct tcggcgcaac caaaacgtat gacttggaag
     9241 tttgggttcc cgcgcaaaat acctaccgcg aaatctcaag ctgctccaac tgcgaagatt
     9301 tccaagcccg ccgcatgaag gcgcgtttca aagacgaaaa cggcaaaaac cgcttggtac
     9361 atactttgaa cggctccggc ttggctgtcg gcagaacgct ggtcgccgta ttggaaaacc
     9421 atcaaaacgc cgacggcagc atcaacatcc ctgccgcact gcaaccgtat atgggcggcg
     9481 ttgccaagtt ggaagtgaaa taagtttgca agctgcctga acgtcaaatg ccgtctgaaa
     9541 cctggttcag acggcatttc ctttaaactt ttaaaacacg tcagccgtcg gcacgaaccg
     9601 cattgccgca atcgccggtc tgtccgacct cgcggatatt ggacagcgta acttccgaaa
     9661 tattacccaa cgcctcttcc gtcaaaaacg cctgatgacc ggtaaacagc acgttatggc
     9721 aggacgacaa ccggcggaac acgtcgtcgg taatcacatc gttggatttg tcttcaaaaa
     9781 acagctcgcg ctcgttctcg tacacatcca tgcccaatgc gccgattttc cggcgtttca
     9841 acgcctcaat cgcggcggca ctgtcaatca gcccgccccg gctggtgttg ataatcatca
     9901 cgccgtcttt cattttgtcg aacgccgctt cgttcagcat atagtggttt tccggcgtgg
     9961 cggggcaatg cagcgtgatg atgtccgact gggcatacag ctcgtccaaa tccacatacc
    10021 tgccgccgat tttttccgct tcggggttgc aaaacggatc gtgagccagc aggttcatgc
    10081 cgaaaccctt taaaatccgc atggttgcaa taccgatttt ccccgtgccg ataacgcccg
    10141 ccgttttgcc gtacatattg aaaccggtca gaccttccag cgaaaaattc gcatcgcggg
    10201 tacgctgata ggctttgtgg atacggcggt tcaaagtcag catcagaccg accgtatgtt
    10261 ccgcaaccga ttcgggcgaa taggcaggca cgcgcacgac tttcaagccc aactcttcag
    10321 ccgcctttaa atccacatta ttgaagccgg cacaacgcaa cgccacagtt ttcacgccaa
    10381 tttgcgccaa tttttccaac acgggccggc tgccgtcgtc gtttacaaaa atacaaaccg
    10441 cttccgcgcc ttccgccatt ttcgccgttt tcgcatccag cataaaatca aaaaactcca
    10501 gctcgaagcc gaaatgccgg ttggcgcggg taaaatgttc gcggtcatag cttttcgtac
    10561 cgtaaatcgc aatcttcatc aatatgtcca gttgtcgcct atggttgaga aacggcataa
    10621 tacactgaat tcaaacaaat cagtagaata tggcagatta aaattgattg catgcacggc
    10681 atttccattt caaaacacaa aactcaatcg cccattgccg ccaaaagctc cgcctgatgt
    10741 tcggcaatca gggcatcggt gatttctgcc aaatcgccgt ccatcacaaa atccagcttg
    10801 tgcagggtga ggttgatgcg gtggtctgtt accctgcctt ggggatagtt gtaggtgcgg
    10861 atgcgttcgc tgcggtcgcc gctgccgatg agggatttgc gttcggcggc ttctttggct
    10921 tgggcttcgc gtttttgcgc gtcgttcagg cgggcggcga ggactttcat cgcctgcgct
    10981 ttgttggcgt gttggctgcg tccgtcttgg cattcgacca ccatgcctgt gggcaggtgg
    11041 gtgatgcgga cggcggaatc ggttttattg atgtgctgcc cgcccgcgcc ggatgcgcga
    11101 aaggtgtcga tgcgaaggtc ggctgggttc agttcgatgt cttccagttc gtccgcttcg
    11161 ggcatgacgg caacggtgca ggcggaggtg tggatgcggc cttggctttc ggtggcgggg
    11221 acgcgctgca cgcggtgtcc gcccgattca aatttcaaac ggctgtacgc cccgagtccg
    11281 acaatacggg cgatgacttc tttatagccg cccaattcgc tttcgttggc ggacacgatt
    11341 tcaacctgcc aacggttgcg ctcggcgtag cggctgtaca tacgcagcaa atcgccggca
    11401 aacagcgcgg cttcgtcgcc gcccgttccg gcgcgtattt cgatgaagat gtttttgtcg
    11461 tcgtcggcat ctttgggcag cagcagtttt tgcagttcgg tatcgagttc gccgattttg
    11521 gctttggccg cttcgatttc ttcggcggca aaatctttca tttcggggtc ggacagcatt
    11581 tcttcggcat ctgccaagtc gctttgggca agccgatagt tttggaatac ttcgacgacg
    11641 ggggtcagtt cggcgtgttc gcgcgtgagc ttgcggtagt tgtccatatc ggatgtggct
    11701 tcgggttgcc ctaaaaggtg ggtaacttct tccaaccggt cgccgagttg ttgcagtttt
    11761 tctaagatag acggcttcat aattcttcca taacaaacgc cgcctgaatt tcagacggca
    11821 tcaaaccgcg gtcattataa tatattttct gaatattcaa aaagataatc tagggacgga
    11881 gcaggctgtc ggcattgcgt tccgttatcg cggcgatttc cgccgcgccg gtaccgcgta
    11941 tctgcgcggc aatttcggca atccgaagaa tgttggcagg cgtattaatc tcttttttca
    12001 gcataaacgg gctgtcggtt tccaatacga aatccccgtc gttcaaggct ttaagcgtat
    12061 cgcgcacttt acgcgcgttc ggattgagca acaacgaacc gatgccgatt ttgaaaccca
    12121 gtttcgtcaa cacgcgcgct tcttccgcgc tgcctgagaa ggcgtgaacg atgccgcctt
    12181 gggcaaagcc tgtctgtttg acggcggcgg cgatgtcggc ggtggctttg agattatgga
    12241 taatcacgcg gcggcgcagg gtttgcgcga tggcaagctg gcggacgaaa acttggattt
    12301 gccgttcgcg ctgcggcggc gtttgggttt tgtcgtaaaa atccaagccg atttcgccga
    12361 cccatgcctg cggataacgt gccaacatcg tttccaggcg gacgcaatca cgctcggcaa
    12421 tgccgtctga aaaccaagga tggatgccga gcgcaatacg gatttgaccg tgttcggacg
    12481 gcatttccga cagttccgcc acgctttgcc aatcctgcgg gcgcgtcgcg ggaacgataa
    12541 accgccacac acccgcctgt cgcgcttcgg caagcacctg cgccagattg ccgcgcaaaa
    12601 cagaatcggc aagatggcaa tgtgtgtcgg tcagcctcat cttcacacca gccccaaccg
    12661 ctgcaactcg tgtttcacct cgtccgcgcc ccatccttca gaaacggcaa gcgtcatcaa
    12721 tgcggttgcg gtttccaaat tgcatttgcc gccgttgatg atgcctgagt tgcggaacgc
    12781 gttgccttgc gcgtaaacgg cagcggttct gccttgtcgg acttggctga tgttgagcag
    12841 cagtttgcct tgctgcgtaa agtcttgcac ggcgcggatg aaaccttcgt ctgcgggcgt
    12901 gttgccgtgt ccgtagcttt gcaggataag ggcttgggcg ggaagctgtc cgagtccgtc
    12961 ggcaagttct tggacggcaa agccggggat aagcgtgcgg acggcgattt ttgcctgcgg
    13021 gtcgggataa cggattttga ggccgtctga aacatctgcc gcgtcctgat tcgggatgcg
    13081 gacattgtgc cagccctggg tttcgtccca ctccgccagt gcgccgaaat gcggattgtc
    13141 gaaaccggcg gcggtttcgg tgctgacttt gctgctgccg acggcgggat aaagtttgcc
    13201 gtcaaaggca ataagcgtct gcttcaatcc gagtgggaat gcggcaacgg cagtcgccag
    13261 attgcgcggc gcgtcgctgc ccacggcgtt gtacggccat tgggaaccgg tcaggacgat
    13321 tggcttgtcc aaaccctgca gcgcgagggc gaacagattg gcggtatagg cgagcgtgtc
    13381 cgtaccgtgc agcaccaaaa cgccgtcgta ctgcggcagc gcggcggcaa tgatgtccag
    13441 ccaagcgcac cagttttgca gttggacggc ggaagaatca atcagcgtcc cacaaacgtg
    13501 ccaatcgaaa tccatgccgt ttgaaaacgg cgcgagtgcc tgcccgacca gcgcggtatc
    13561 ggggcgcagg ccttcgctgc tttgcgtcat gccgatggtg ccgccggtat aaaggacaaa
    13621 aattttctgt ttcatggctc atcctgaaaa tgcaaagacc gcctgaaacg cgaaatgcgt
    13681 ccggacggtc gaaaatctga tttactgctg cttctgtgcc gcttttttcg ctgccttttc
    13741 cgccttgcgt ttggcgcgtt tttcgctcaa ttgtgcgcgg taaagctgat aatgtcggcg
    13801 tttgcgccac cagaaccacg ccagcgccgc cgccagcacg cccaatgcga tgaagatgcc
    13861 ggattgcagg ctgtgcattt tcgccatcag ccaatcgatg ttgtgcgcgc cgtactcgcc
    13921 caagtaaatc caaacgggca cggaaatcag cgcggcaagc ccgtccataa tcagaaagcg
    13981 cagatacgat actttgcggc tgatgccggc ggtaacgaaa acggcagtcc gcaaacccgg
    14041 caggaaacga gcgacaaaca gaacccagtt gccgtatttg tcgaattttt cctgaacctg
    14101 tgcgtaacgt ttcggcgtca tgatgcgcgc aatcggtttg aacttgagga ttttctgccc
    14161 ccagatgcgt ccggcggcga acatgatgcc gtccccgacc aatacgccga gcataccgac
    14221 tgcaaacata atatgcggat tggtataacc catacccgaa atcacgccgc ctgttaccaa
    14281 ggtcaaatcc tcgggaatcg gcacgccgaa accgcagatg accaaaacga aaaacacggc
    14341 cgcatagccg tattcgacaa aaaaggcttc caaaagggca aacatagcgg atattccatt
    14401 gtcggagata aaaagtcaga acaagccgaa acattttctg cgcgaaacgg cattctatca
    14461 aagattatgc cgtctgaaag cggaaaaaag gcagattcgc gcatcctccg catgttcaga
    14521 cggcatttaa acagaaaacc ggccggttct aaaaacggtt ttgcctgatt ttgcctaaat
    14581 gccgccgatg gcggcggcaa tgcgttccgc cccttcgcgc gcccaatccg cctgccgcgc
    14641 ctccaccatc acgcgcacga cgggttcggt tcccgaagcg cgcaacacga cacgcccttt
    14701 gccttcgagt tctttttcca cttccgccaa cacgtctttc gaagcttcct gccattgctg
    14761 acctttttgg atgcgcacgt taatcatcgt ttgcggatac ggctgccaat cggcgcaaac
    14821 ggtggcgagg tcttggttca gcgtttgcag tgccgccaaa acttgcagcg cggaaataat
    14881 gccgtcgccg gtgttgtgtt tgtccataca caaaatatgg ccgctggctt cgccgccgat
    14941 gagccagccg cgttggttca gctgttccaa cacatagcgg tcgccgactt tggcgcggca
    15001 gaaatccacg ccctgctctt tcagggcgat ttccatcgcc atattggtca tgaccgtgcc
    15061 gaccacgccg ccgatgttga taccttctcg ggcgcgggct ttggcaatga cgtaaatcag
    15121 gctgtcgccg tcgtaaacct gcccgttttt atcgaccatc atcaggcggt cgccgtcgcc
    15181 gtctaaggcg atgccgtagt cggcttcatg ctgtaaaacg gcggcctgga gtgtcttggt
    15241 ataagtcgca ccgcattttt cgttgatgtt gtagccgttg ggttcgttgc cgatgctgac
    15301 gacctgtgcg cccagttcgt gaaacacctt gggggcgaca ccgtaccccg cgccgttggc
    15361 ggtatcgaca accaacttca aaccccgaag gtcggaatgg ctgggaaagg tggatttgca
    15421 aaattcgata tagcggtcgt ccgcaccgct gatgcggcgt gcgcgaccga gacgggcgga
    15481 cggttgggtt ttcatttcgc cgtcgatttt ggcttcgatt tccaactcga cttcatcgga
    15541 aagtttcacg ccgccttcgg cgaagaattt gatgccgttg tcggaatagg cgttgtgcga
    15601 cgcggaaatc atcacgccgg cggacaggcg caacgcgcgg gtcagataag ccacgccggg
    15661 cgtgggcagc ggtccggtct gtaccacatt cacacccgcc gccgtaaaac cggccaccaa
    15721 agcggcttcc agcatatagc cggaaatgcg cgtgtctttg ccgatgagga cggtcggttt
    15781 ctggtcggtg tcgtgctgca ccaaaacctg ccccgccgca tagccgagtt tcaatacgaa
    15841 atcgggcgta atcggaaatt gccccacttc gccgcgcacg ccgtccgtgc cgaaatattt
    15901 ttttgccatg tgttgctccg agaatgtgaa ccgttgtccg agattataca gtcagtttgt
    15961 gccttgctgt ctgcaccgtt gatgccgtct gaaaccgccc cgtccttttc agacggcatg
    16021 aagtatgtga accgctgttt acagattgat gcccaacgct tcccacacct tcaacgcatc
    16081 cgctgtcgcc ttcacatcat gcacccgcac gatttgcgcg ccgcgcgcta cggaagccaa
    16141 cgctgccgcc acgctgccgt gtacgcgttc cgccgcattt gcctcgccgg tcagctcgcc
    16201 tatcgtgctt ttgcgcgata cgccgatgag cagcggaaaa cctgtttccg ccatcaattc
    16261 gggcaaatgc cgcatcagcg cgatattgtg ttgcaagggt ttgccgaagc cggagccgaa
    16321 gccggggtcg agtatgatgc gttgcggtgc gatgcctgcc gcgatacatt ccgctgagcg
    16381 cgctttcaaa taccgcgcta cttcaccgac aacatcttga tatttcggat taatctgcat
    16441 ggttttgggc aaaccctgca tgtgcatcag gcaaatgccc gtgtccgcct gacgcgccag
    16501 caattcgacc gcgccctcgt cattcaacgc cgccacatca ttaataatat cgatgccgcc
    16561 gagtgccaac gctttttcca taatcaccgt gcggcgcgtg tccaaactga tgggaacgcc
    16621 ccaccccgcc acttccgcca aaacaggctc aacccgcgcc cattcttctt caggcgaaac
    16681 ataatccgca cccgaccgcg tcgattcgcc gccgatgtcg agaatgtctg cgccttcttt
    16741 tagaagctgt tcggcatgtg ccaaggctgt ttgggcgttt tgcgaataca cgccgccgtc
    16801 ggaaaaagaa tcgggtgtga gattcacgat gcccatgatt ttcggtttgt ccaaaccgat
    16861 ttcaaaccgt cctgcctgcc aaacgtgtcg tgccatctga actcctccca aaataaaaaa
    16921 cagattatat gccgtctgaa accgtcttgt gcgcttcaga cggcaccgct attcgggcgg
    16981 cagacggcat gttgtccgaa tgtctgctcc gcctttgaat ctgccggtat gcctgctatc
    17041 cgcccgactt ttcaaaacag gttccgacga ttccgcacgc gcctgccgcc tttgccaagc
    17101 cgtacaggat ttcctgcggc atatcgcggt tccataatcc cgtaatattc gcaatcacgg
    17161 gcagatggct gatttggcgg actttcacga tggattcgac atccaaacgg tagggatggc
    17221 ctttggtatg gttcaatacg cccgactcgc ccagaatcag gtggcggttg ccgcgcgaga
    17281 cgacatattc tgcggcattc aaccaatctt cggcagaatg gtgcttgtct ttacacagca
    17341 ccaagggaat gttcaggttt ccggcttcat tcaatacggc aagatcggac atcagcccgc
    17401 cgcccaaata caggatgtcc gcccccgcat tcaaagccgc ttcgacatgg cggacgttgc
    17461 ggacgcgcac caatacgggt ttccctgcgc catgcgccga tgcggtctgt tccgccaacc
    17521 gtctgcaccg tccccgcctt tcatccgcac ttgaagtgtc gtataagttt gccgaagtga
    17581 aaaacggatc cagaaacact gcatccgcat tgcgccatac tgacggttct gcggcgatac
    17641 ggacggtttc cccgccgccg aaagccacgc ctttggcggc aacgcggctg tcttccgccc
    17701 gattttcccg actgacggtt ttccatgtat ccaaaatgcg gacggctttc tcgacctccg
    17761 gcagcgtctg cacctccctg acgctcaaaa ccctatcgtc gccgattgcg ccgatgacgg
    17821 tacgctcgtc gccgtgagaa atgtgttctc gcagacctct gctgcggata aaggcgacaa
    17881 cgccggcaat gtccgcttcg gcggcacgcc tgctcatgac aataatcata tttcctcctg
    17941 acacaagaaa cggcctgccc aaaataggat ttttgcaagc cgtgttatac tgtggcgtgt
    18001 tttacagatt gttcgggcta tggatttatt atcggttttc cacaaatacc gtctgaaata
    18061 tgcggtggcc gtgctgacga tactgctttt ggcggcagtc gggctgcacg cttccgtata
    18121 tcgcaccttc acgcctgaaa acatccgcag ccgcctccaa caaagcattg cacacacaca
    18181 ccggaaaatc tcgtttgatg cggacattca gcgcaggctc ctgccccggc cgaccgtcat
    18241 cctgaaaaac ctgaccatta ccgaacccgg cggcgaccag actgccgttt ccgtccaaga
    18301 aaccaaaatc ggattgagct ggaaaaacct gtggtcggat cagatacaga ttgaaaaatg
    18361 ggtggtttcg agtgcggaac ttgccctgac gcgcgacggg aaaggtgttt ggaacatcca
    18421 agacctgatc gacagccaaa aacgccaagc ctcagtcaac cgcattatcg tcgaaaacag
    18481 caccgtccgc ctcaatttcc tgcaggaaca gcttatcctg aaggaaatca acctcaacct
    18541 gcaatccccc gattcgtcgg ggcagccgtt tgaaagttcg ggcatactgg tttggggaaa
    18601 gctgtccgtc ccgtggaaaa gcagggggct gttcctttca gacggcatcg gcacgcccaa
    18661 aatctcaccg ttccattttg aagcttccac ttcgctggac ggacacggca ttaccatttc
    18721 caccaccggc agcccttctg tccgcttcaa cgccggcgga gcggatgccg ccggcctcgg
    18781 cctgcgtgca gacacttcct tccgcaacct ccacctgacc gcccaaatcc ctacgctggc
    18841 actcaggaac aacagcatta aaattgaaac cgtcaacggc gcatttaccg ccggcggcga
    18901 atatgcccaa tgggacggtt cgttcaaact cgacaaagcc aacctgcact ccggcatcgc
    18961 caacatcggc aacgccgaaa tctccggcag cttcaaaaca ccgcgccacc agaccaactt
    19021 ctccctcaat tcgccgctcg tatggacgga aaacaaaggg ctggacgcgc cgcgcctgta
    19081 tgtatcgacc cttcaggata ccgtcaaccg cctgccgcaa ccccgtttca tcagccggct
    19141 cgacggttcg ctgtccgtac cgaatctgca aaattggaat gccgaattaa acggcacatt
    19201 cgaccgccaa accgttgccg cgaaattcag atacacacat gaagacgcac cgcatctgga
    19261 agccgccgtc gcactgcaaa aattgaacct gaccccctat cttgacgacg tgcggcaaca
    19321 aaacggcaaa atatttcccg acaccctcgc caagctgtcc ggcgacatcg aggcgcacct
    19381 gaaaatcgga aaagtccaac ttcccggcct gcaactggac gatatggaaa cctacctcca
    19441 cgccgacaaa ggccatatcg cgctcagccg tttcaagtca gggctttacg gcggccatac
    19501 cgaaggcggc atcagcatcg ccaacacccg tcccgccact taccgcctgc aacagaatgc
    19561 aagcaacatc caaatccaac cgctgctgca agacctgttc ggcttccaca gcttcagcgg
    19621 caacggcgac gcggtcatcg acctgaccgc gggcggcgaa acccgaaaag agcttatccg
    19681 ctcgcttcaa ggcagcctgt cgctgaatat ttccaatggc gcatggcacg gtatcgacat
    19741 ggacaatatc ctgaaaaacg gcatttcggg caaaactgcc gacaatgccg cacccagcac
    19801 acccttccac cgattcacgc tcaacagcga aatttcagac ggcatcagcc gccacatcga
    19861 taccgaactc ttctccgaca gcctctatgt taccagcaac ggctatacca atctggatac
    19921 gcaggaattg tctgaagatg tccttatccg caacgccgtc catccgaaaa acaaaccgat
    19981 tcccctgaaa atcaccggta cggtggacaa gccgtccatt accgtcgatt acggcaggct
    20041 gaccggcggc atcaattcgc gcaaagagaa acagaaaatc ctcgaagaca ccctgctgga
    20101 acaatggcag tggctcaaac ctaaagaacc gtaaacatcc tgcgtacaaa aatgccgtct
    20161 gaaacacccc cgcgcttcag acggcatgac cgtaaaacct acaaccccaa ttcctcccaa
    20221 atcccatcaa tcttagccgt aaccgcaggg tcttttttga tgacgcgtcc ccattcgcgg
    20281 tcggtttcgc ccggccattt gttggtcgca tccaaaccca ttttgccgcc gagtccgctg
    20341 acggggctgg cgaagtcgag ataatcgatg ggcgtgtttt ctaccaaaac agtgtcgcgc
    20401 acggggtcca tgcgcgtggt gaccgcccag atgacttctt tccagtcgcg tacgttcaca
    20461 tcgtcatcca ccacgatgat gaatttggtg tacataaact ggcgcaggaa cgaccagcag
    20521 cccatcatca cgcgcttggc gtgtccggcg tactgttttt tcatgctcac caccgccatg
    20581 cggtaggagc agccttcggg cggcaggtaa aaatcggtga tttcggggaa ctgcttttgc
    20641 aagagcggta cgaacacttc gttcaatgcc acgcccaaaa cagcgggttc atcgggaggt
    20701 ttgcctgtgt aggtcgaatg gtaaatcggg ttttcgcgca tggtgatgcg ctcgaccgta
    20761 aatacaggga aatgatcctg ctcgttgtaa tagccggtgt ggtcgccgta tgggccttcc
    20821 aacgcggttt cgttcggatg aatcacgcct tccaatacaa tttcagcacg ggcaggcact
    20881 tgcaaatcgt tgccgataca tttcaccagc tccgtccgcg aaccgcgcag cagtccggca
    20941 aactggtatt cgctcaaagt atcgggaaca ggcgttaccg ctccgagaat agtggcaggg
    21001 tcgcaaccga gcacgacggc gacgggatac ggcgtatcgg gattgagttt gcggaactcc
    21061 tgataatcca acgcgccgcc gcgatgcgac agccagcgca taatcagctt gtttttgccg
    21121 atgagttgtt ggcggtaaat gccgagattt tggcgttttt tgtgcggccc gcgcgttacg
    21181 gtcaagcccc atgttaccag cggcgcaacg tcttccggcc agcaatgctg aatcggaagt
    21241 ttatacaaat caacgttttc gccttcccac acgatttcct gacacggcgc gtttttcacc
    21301 acgttcggcg ccatgctcca aatgtctttc agtagcggca gtttggaaaa cgcatctttg
    21361 atgcctttgg gcggttcggg ttctttcaaa tacgccagcg tctgcccgat ttcacgcagc
    21421 ttggacacgc tgtccgcgcc catgcccatc gccacacgtt cgggcgtgcc gaacaggttt
    21481 gccaacacag gataaccgta gcgcgtaccg tcgggcttaa ccgggttttc aaacagcaac
    21541 gccggccctt cggcgcgcag cacgcggtcg gcgatttcgg tcatttccaa atgcggggaa
    21601 acggggtgcg cgatgcgttt gagtttgccc tgctgctcga gcatggcgat gaagtcgcgc
    21661 aggtctttgt atttcatatt catccttttt gtccttttat cctgagcaat ccgattcgga
    21721 taccgcccct atccttgcct gcgcttcggc atattctatg ccgtgataaa agtcgcgtac
    21781 cagcggatgt tcgctgcctt gatggagttg caacaaagga cgttgaccat cgggttgggt
    21841 aacgacattg caatgcaaac cgaaggtgtc ggtttcataa gggggcagcc ggttgcagat
    21901 catcccgaaa taaacgacat tttccggatt gtcgtgaaag tggctttgat agtcgttaaa
    21961 actcttttcg ctgacggaca cccacacgcc gtattccagc gtttcctcat gcccgataat
    22021 cggaataagc agcaccgcgc ggataaaacg gtcggtttgg tcgggatagc ggatgatgca
    22081 gaaatcgccg ccgcattcag cttggtaagc aatgcgttct tcttcactga gttgattata
    22141 gggatagggg gcggtaaagc cgattgcggg catatcttca tgtttttcgc cgcaggaagt
    22201 gcaagtgtac ataaggtttc agactttcaa aacgagtttg cggtaaagcc attcgccggc
    22261 aaacggcatc cccatcaata cataggcaat cacgccggta taaaccgccc accaatcata
    22321 tcgccccaac cgtgccaaca aagcggcaag cgtcccgttg gcaataaaga atacgcacca
    22381 aacctgcgtt acccggcggg tatagcgcac agctttttca ggcaggtcgg gctgttgcag
    22441 ccgcgcaagt ttttcaatca ccgtctgccc ggcaaacagg ctgccgccga acaccgccaa
    22501 catcatcaga ttgacgagga cgggatacca atacatcgaa tcatgccgcc cgaacaccaa
    22561 tactgcggca aaaaacagtg taataaacaa agccgcataa cgctgttggg gcagtttggc
    22621 agtcagggcg cgcagcagcc acaacccgca catcgccgcc gccagccaga caaaccagcc
    22681 cgcctccctg ccgtaatata gtggattaac aaaaaccagt acagcgttgc ctcgccttgc
    22741 cgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta taccacaaag
    22801 cgggataggc aatgcttaat acggtcagaa aaatatgtcc gaaaaaaccg ggtttcattt
    22861 tgaatccgca caaatgtttt cagacggcat ccgataaaaa catgccgtct gaaaaataat
    22921 tagaaatacc cgattagccc gcctgaatct tcaataccgc ctgtaccacg tcgttgacgg
    22981 tgcggacatt gcggaaatct tcagcctgca gcttgcgggc tgccacagcc attcacgatt
    23041 gcgatatacc cggcggcatt cccgactgcc gttcagcaga aagcgcaccc attccaaacc
    23101 gctccaatat gcctcgggca gcataccggc ttcagacggc atatcgtccg aagcagataa
    23161 agtcaggctg taacgcgtcc ctttggtcag aaccatcgcc aaagcataag caaacggcgc
    23221 gcgcgttgcc gatacggcat atccttccgg cagcggatcg tccgccgcca aaaccaaaac
    23281 cgacccgcat ccctcttcca acagtgatac cgcttccgcc aatgccgttt ccacaccgtc
    23341 ggcacacacg gccaatgccg tctgctcgct catatcccgc ctcaatatcg accattaccc
    23401 cgccgttgca ttgtgcaccg acaaaccgaa cgaagtcggc gacacggttt gcgatttcaa
    23461 cagttccaac cacaaatcga aactgcgcgc catttccccg tcgtgcgagg cataaactat
    23521 agtggattaa attttagggg ctgtactaga ttagcagata tgttaccctc gaaatatgaa
    23581 gataacacac tgcaaattaa agaaaaaagt acagaaagaa ctgctcc
//
LOCUS       DAXHKG010000014        22266 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.014, whole genome shotgun sequence.
ACCESSION   DAXHKG010000014 DAXHKG010000000
VERSION     DAXHKG010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22266
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.014"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            1..99
                     /locus_tag="ACFMWP_000447"
                     /pseudo
     CDS             1..99
                     /locus_tag="ACFMWP_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(120..1034)
                     /locus_tag="ACFMWP_000448"
     CDS             complement(120..1034)
                     /locus_tag="ACFMWP_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC5891103.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="ACFMWP_000449"
     CDS             1290..2759
                     /locus_tag="ACFMWP_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HFC5891104.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAIAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3011..3382
                     /locus_tag="ACFMWP_000450"
     CDS             3011..3382
                     /locus_tag="ACFMWP_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891105.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLAPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3455..4864
                     /gene="thrC"
                     /locus_tag="ACFMWP_000451"
     CDS             3455..4864
                     /gene="thrC"
                     /locus_tag="ACFMWP_000451"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HFC5891106.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWTEVAAGKGFDLQFALDKVGGKYGFTSSKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4910..5704
                     /locus_tag="ACFMWP_000452"
     CDS             4910..5704
                     /locus_tag="ACFMWP_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891107.1"
                     /translation="MTLPMQETRFSILLDELAAKQKAAIAPHLLADGSKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAARIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5892..6668
                     /locus_tag="ACFMWP_000453"
     CDS             5892..6668
                     /locus_tag="ACFMWP_000453"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC5891108.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(7336..9807)
                     /locus_tag="ACFMWP_000454"
     CDS             complement(7336..9807)
                     /locus_tag="ACFMWP_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC5891109.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNLRAGMDTPIAVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVREAAVVKLQ
                     AGDVVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9804..10982)
                     /gene="hflX"
                     /locus_tag="ACFMWP_000455"
     CDS             complement(9804..10982)
                     /gene="hflX"
                     /locus_tag="ACFMWP_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HFC5891110.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIATVRISVAENTGIDALREAIAEYCATAPNTDETEMP
                     "
     gene            complement(10987..12267)
                     /locus_tag="ACFMWP_000456"
     CDS             complement(10987..12267)
                     /locus_tag="ACFMWP_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HFC5891111.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNSRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            12269..12397
                     /locus_tag="ACFMWP_000457"
     CDS             12269..12397
                     /locus_tag="ACFMWP_000457"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891112.1"
                     /translation="MPSSRRGNGVFYQNGKLANAVSDCRLPNRQTFPRADAEPDAV"
     gene            complement(12420..13145)
                     /locus_tag="ACFMWP_000458"
     CDS             complement(12420..13145)
                     /locus_tag="ACFMWP_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HFC5891113.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13218..13895)
                     /gene="radC"
                     /locus_tag="ACFMWP_000459"
     CDS             complement(13218..13895)
                     /gene="radC"
                     /locus_tag="ACFMWP_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HFC5891114.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQSVRSF
                     RQLGLMP"
     gene            complement(14018..15367)
                     /gene="gshA"
                     /locus_tag="ACFMWP_000460"
     CDS             complement(14018..15367)
                     /gene="gshA"
                     /locus_tag="ACFMWP_000460"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HFC5891115.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNVYALGEILCSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNSAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15627..17036
                     /gene="leuC"
                     /locus_tag="ACFMWP_000461"
     CDS             15627..17036
                     /gene="leuC"
                     /locus_tag="ACFMWP_000461"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HFC5891116.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17133..17387
                     /locus_tag="ACFMWP_000462"
     CDS             17133..17387
                     /locus_tag="ACFMWP_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891117.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17449..18090
                     /gene="leuD"
                     /locus_tag="ACFMWP_000463"
     CDS             17449..18090
                     /gene="leuD"
                     /locus_tag="ACFMWP_000463"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HFC5891118.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18260..19529
                     /locus_tag="ACFMWP_000464"
                     /pseudo
     CDS             18260..19529
                     /locus_tag="ACFMWP_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
     gene            19545..20276
                     /locus_tag="ACFMWP_000465"
                     /pseudo
     CDS             19545..20276
                     /locus_tag="ACFMWP_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
     gene            20310..21380
                     /gene="leuB"
                     /locus_tag="ACFMWP_000466"
     CDS             20310..21380
                     /gene="leuB"
                     /locus_tag="ACFMWP_000466"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HFC5891119.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21543..22106
                     /locus_tag="ACFMWP_000467"
     CDS             21543..22106
                     /locus_tag="ACFMWP_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HFC5891120.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQRPMEKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5365 a         5852 c         5792 g         5257 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agttttccgg atgatggtta tcaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcgcg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcgacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgata gcgggaacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctagggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttatggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcag aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggcggcg ggatttttta ttttcccgat tgaagtataa tgttgccggg cttcaaccgg
     2881 atattcaaaa cggtttgttc caacactcgg aacggcgcat aaaacgccgc ctttcgcgtt
     2941 atcccgaacg gggcggctaa tcagattcta tcgccataaa aggcggggtt tcaaccgaaa
     3001 aggaattgag atgaataaaa ccttgtctat tttgccggtg gcaatcttac tcggcggctg
     3061 cgccgccgga ggcggtaaca cattcggcag cttagacggt ggcacaggca tgggcggcag
     3121 catcgtcaaa atggcggtcg ggagccaatg ccgtgcggaa ttggacaaac gcagcgaatg
     3181 gcgtttgacc gcgctggcga tgagtgccga aaaacaggcg gagtgggaaa acaagatttg
     3241 cgcttgcgtc gcccaagaag cacccgaacg gatgaccggc aacgatgtga tgcagatgct
     3301 ggctccgtcc acgcgcaatc aggcacttgc cgccctgacc gccaaaacgg tttccgcctg
     3361 cttcaaacac ctgtaccgct aaccttcttc agacggcatg aggcagatgc cgtctgaagc
     3421 cgttttcctg caatttcgac agacgagaaa aatcatgaaa tacatcagca cgcgcggcga
     3481 aaccgcacac aaaccgttca gcgaagtttt attgatgggg cttgcacccg acggcggcct
     3541 gatgctgccg gaacattatc cgcaaatcgg gcgggaaacc ttggacaaat ggcgcggttt
     3601 ggcttatccc gaattggcgt ttgaaattat gcgcctgttc gttaccgaca ttccggagga
     3661 cgatttgcgc gatattctga accgtactta cacggaagcg gcgttcggta ctaaggaaat
     3721 cacccccgtc cgcacgcttt cagacggcat caaaatccaa gccttgtcca acggcccgac
     3781 gctggcgttc aaagatatgg cgatgcagtt tttgggcaat gcgtttgaat atgttttaaa
     3841 caaagaaggc aaaaaactca atatcttggg cgcaaccagc ggcgatacgg gttcggctgc
     3901 ggaatatgcc ttgcgcggca aaaaaggtgt gaatgtattt atgctgtcgc ccgatggcaa
     3961 aatgagcgcg ttccaacgtg cgcagatgta cagcctgcaa gacgggaata tccacaatat
     4021 cgccgtgaag ggtatgtttg acgactgtca ggatattgtg aaggcggtgc aaaacgatgc
     4081 cgcgttcaag gaaaaatacc atatcggtac ggtcaattcg attaactggg gacgcatcgt
     4141 cgcgcaagtg gtttattact ttgccggcta tttcaaagcg acgcaaagca atgacgagca
     4201 agtcagcttt tgcgtgccga gcggcaactt cggcaacgtt tgcgcgggac atattgccaa
     4261 acagatgggc ttgcccatcc gccgcctgat tgtcgcgacc aatgaaaacg atgtgttgga
     4321 cgagtttttc aaaaccggcg cgtaccgccc gcgcaacagc gcgcatactt atgttacctc
     4381 cagcccatct atggacattt ccaaagcgtc caatttcgag cgtttcgtgt tcgacctgat
     4441 ggatcgcgat cctcaggaaa tcaatacgct gtggacggaa gtcgcggcgg gcaagggctt
     4501 tgacttgcag tttgccttag acaaagtcgg cggcaaatac ggctttacct ccagcaagtc
     4561 cacccacgcc gaccgcctcg ccaccatcaa acaggtttac gagcaagacc aagaactcat
     4621 cgacccgcac actgccgacg gcgtaaaagt cgcccgcgaa gtgcgcgaag aaggggaaac
     4681 ggtggtttgt ttggaaaccg cgttggcagc gaaattcgat gcgaccatac gcgaagccgt
     4741 cggcgatgcc gccattccgc gccctgccgc gctggaaggt ttggaaaacc tgccgcagcg
     4801 cgtgcaaacc gtgccgaaca gtgcggatgc ggtaaaaggc atcatcgaac aaacccttgc
     4861 ctgatgttcc gtacaggggc actccgtccg aacttaagat tgaaagaaaa tgaccttacc
     4921 tatgcaggaa acccgttttt ccatactgct agacgaattg gcggcaaaac agaaggcagc
     4981 catcgccccc cacctgcttg ccgacgggag caaggtatgg atacgcaaag caggcaggca
     5041 caatgcgcga tggcgttacg cgctgctcgg tatggttgcc cgatatttga aactgggggt
     5101 gttgaagccg gttcccagcc tcggcggcga gcctgccatt gcaaccgaat caaaacgcct
     5161 gtacgaattg cgcgcggcga ggatagccgt tcccgaattg ctcgccgtca ggaaaaatgc
     5221 ccttatgttc ggcaatttgg aaggcatccc gctcgatacg caaatccgcc aagaagccga
     5281 agccggaaag gcggacgctt ggcttgccgg tttggaagcc attgcacgcg tgcataaaaa
     5341 acagcagttc ctcagtcagg cgtttgcgcg gaatatgatg tcggacggaa aaaacatcag
     5401 ctttctagat tttgaagacg acccttccga agtcctgacc atagcgcaat gccaagcccg
     5461 cgattggctc tgctacatcc attcgaccgc gctgatattg aaaaacggcg gactgctgga
     5521 agcggctgcg gaaaaatggg gcggcgtatt gtcggatcag cctgccgaaa tacaaaagct
     5581 gattgccgcc accgtcaaac cgatcctccc gatacgcagg ctggaacacc cacgctgggg
     5641 acgggacgca ctcaggctgg cagcctcgat ttccctgatt tcccttgccg atatgccgcc
     5701 ataagccgcc gcccgccccg cgatgccgtc tgaagccctt cagacggcat ataaccaacg
     5761 cgcatcaagc attgtcgcaa ccatccgttt cgtttagaat tttggcttta tcccgaatcg
     5821 ggcagacatt tccactctgc cgcacctccc gaacaagcac tatccatttc ttttactgac
     5881 aggaaaccca aatggcagca ttcaataccc aaaaagtatt gtccgtacac cactggacag
     5941 acgcatattt tacctttacc tgcacccgcg acgaatcgtt gcgctttgaa aacggacagt
     6001 tcgttatggt cggattgatg gtggacggca agccgctgat gcgcgcatac agcgtcgcct
     6061 ccgccaactg ggaagaacac ctcgaatttt tcagcattaa agtccaagac ggcccgctga
     6121 ccagccgcct gcaacacctc aaagtcggcg acgacgtgtt aatcagcaaa aaaccgaccg
     6181 gaactctggt tgccggcgac ctgaatccgg gcaaacacct ttacttgttg agcaccggta
     6241 ccggcatcgc ccctttcttg agcatcacca aagaccccga gatttacgag caatttgaaa
     6301 aaatcatcct cgtacacggc gtgcgctaca aaaaagattt ggcgtactac gaccgcttta
     6361 ccaaagaatt gcccgaacac gaatacctcg gcgacttggt taaagaaaaa ctgatttact
     6421 acccgattgt ttcccgagaa gaattcgaac accacggccg tctgaccgac ctgatggtaa
     6481 gcggcaaact gtttgaagac atcggcctgc ccaaaatcaa cccgcaagac gaccgcgcga
     6541 tgctgtgcgg cagccccgcg atgctgaaag atacctgcaa agttttggac gatttcggtc
     6601 tgaccgtctc tccgaaaacc ggcgtgcgcg gcgattacct gattgagcgc gcgtttgtgg
     6661 atcaataagc tgcttgaaaa tgccgtctga acggcatcag cgataaaaaa acccgaatcc
     6721 tgccaatcag gattcggggt ttttatagtg ggtaaaaatt agaaatgcac atttccgtca
     6781 ttccaacaca ggtgggaatc cggacttacc tgtttcatta tcgtttgaaa ataaaagaga
     6841 aaccaaacat atagattccc gcttgcgcgg gactgacgac ggtgttctgc gtagccaaag
     6901 cagaaaaaca tccttattgt catttcatca tgatataaca ataaggatgt taaaaattag
     6961 ttatcattat atgcatgata tataagaaaa attgtcccaa taagaaatgt tatgcagaaa
     7021 ataaaatgaa aaggatggtt ttcattgaaa atggttgttc tgccatcgtc atacacagaa
     7081 ccggtatttg gaaaaaaata atccatattg acatcattat tccatttatc gcataaatcc
     7141 actttttaat ttttttccac attaatataa tctcttattt aataaaatca aaataaaaat
     7201 caaatgccta acaattcgat ctcaaatttt gaacgccaac gtgtttgagc ggtaacaata
     7261 catactttaa gtttgcaatc cttcatcgtc ttatttttgt tttcatcaac tatacgtcta
     7321 aagcaacgcc gtccgtcatt gttcggacgg cattttttca gactgcattt tcccccgttt
     7381 gtgaaggcgc agggcgttgc ccaaaaccgc cagcgaactg aagctcatac ccagtgcggc
     7441 tatccacggt tggacatagc ccaaaacggc aagcggtacg gcaatgatat tgtacgcgcc
     7501 cgcccatatc aggttttgcc ggataatatg gcgggtgcgc cgcgcctgat cgagcaggtg
     7561 ggcgacggta cgcaaatctt cgttcaataa cacaatgtcc gcgccgtccc tcgcaatatc
     7621 cgtcccgccc gctgcggcgg cggatacgtc tgcctgcgcc aaaacgggcg cgtcgttgat
     7681 gccgtcgcct atcatcagca cttttttccc ttctttttgc aaggctttga cgtattccag
     7741 tttgtcctcg ggcatggctt gggcgcggta gtgcgcgaca cccagggcac gggcggtttc
     7801 ggcaacggcg gtttcgcggt cgccgctgag gatgtgcagg gtcaggtttt tgcctgccaa
     7861 ctgccgcacc gcctccgccg cgctgtcttt caaggggtcg gtcaggtaga acacggcttg
     7921 gaaaccgctt tgactgccga ggtaaaccgc gctgccgccg ccttctgttt gcggttcttt
     7981 acctgaaatt tcggcgacat aggatgccct gcccaatgcc caaacctgtg tttcgccgtt
     8041 gacggtcagt tgcgcgccca cgccttcgcc gatgcggttg aggcgttgtt taatagcgat
     8101 gtcggggacg ctgccgtctg aaatgcggca gttgaggatg gcgcgggcaa ggggatgttc
     8161 ggactgttgt tctaaagcct gcgccaccgc gagaacaaag gcttcgtctg tgcctctcaa
     8221 caatgagata cggcggacgg cgggtttgcc ttgggtcagc gtgccggttt tgtcgaagat
     8281 gatgtcggtg gtttgggcga gggtttcgat tgcctgcttt ccgccgatta aaataccttc
     8341 gcgcgccagc gtaccggtag aagctgccag cgcggtcggc gtggcaagcg ataaggcgca
     8401 ggggcaggta atgaccagca gggcgacggt aatccacaat gcggtgtgcg cgtcggcgta
     8461 cagcgtccag ccgatgaaga cggggacggc aagcaggagt tcgccgaata tgaaagacga
     8521 ggcgtattgt tccgccaact cggcagtgcg cggtttttgc gctaaggcgc ggtcgagcag
     8581 gcggacgatg tgcgacagtc gcgtgccgcc gccggtgcgg tcggtgcgta taatcagggg
     8641 gctttgcgtg ttgagtgtgc cggcggttac tttttcagac ggcattttgg cgacgggcag
     8701 gctctcgccg gtcagcatag attcgttgac ggcactgctt ccttccagca ccgtgccgtc
     8761 aacggggatg gtttcgcccg gtttgaccag taccacatcg cctgcttgga gcttgacgac
     8821 ggcggcttcg cggacatcct gtacggcagg atagccgggc atccggtggc agaaggcggg
     8881 tatcagtttc accagccttt cggcagcatc gcctgccttg cgccgggcaa tgtgttccat
     8941 aaagcgtccg cccagcagga aaaacagcag catggcgatg gattcgaaat acatcccctg
     9001 ccccgcattg gtcgcaaggc tgtaaacgcc ggcgataaag gtcatgatga tggcgacggc
     9061 aatcggcgta tccatgccgg cgcggaggtt tttcaggtcg cgcaacgcgc cttgataaaa
     9121 cgggacggcg caatagaata cgacgggcag caccattaaa aagccgcccc aatggaggat
     9181 ttgcaggaaa tcgggttcga tgtcgccgcc gtaaaggtag gtcggcagcg cgaacatcat
     9241 cgtctgcatc atccccagcc cggcaacggc gaggcggacg atgtattgtt ttcgttcttt
     9301 ttggttggcg gcttcgattt tttgcgcgtc atagggtgcg gcggtgtagc ctatctgcct
     9361 gattttcaac agaatgtcgg aaaggcggat tttgccgtcg tcccagacga cgcggcagcg
     9421 gtgcgtgctg taattgaggt cgatgcggac gatgccgtct gtacgcaaaa gctgctgttc
     9481 gatcagccag acgcaggcgg cgcaggtgat gccgccgagc attaaaaccg cctcgcgcgt
     9541 gccgccgtgg gtttccacaa agtcggactg gacttcgggc aggtcgtaca ggcggatttg
     9601 gtcgaggatt tcttggggcg gcagctcggt tttttgcgcg tcggcggtgc gttgtttgta
     9661 ataactgccc aagcccgcgt caataatgct ttgtgcgacc gcctgacaac cggcgcagca
     9721 ggtttcgcgg tcttcgtttt cgtaacggac agtcaggtgg aggtgttcgg gaacatccag
     9781 accgcagtgg aaacaggttt ttttcatggc atttcggttt cgtctgtgtt tggtgcggtg
     9841 gcacaatact cggcaatggc ttcgcgcagt gcgtctatac cggtattttc agcaacggaa
     9901 atgcggacgg tggcaatttt tcccgcagcg tcgcgccata tgcccgtgtt ttgttcttca
     9961 gacggcagca ggtcggtttt gttgtacacc ttgatgcacg gaatatcgcc ggcatggatt
    10021 tcttgcagta cgttttccac gtcttcaatc tgctgtccgc tgttcggggc ggcggcatcg
    10081 acgacgtgca gcagcacatc ggcttgcgcg gtttcttcca gcgtggcgga aaatgccgaa
    10141 atcagtttgt gcggcaaatc actgacgaat ccgacggtat cggtcaggat aatgctgcat
    10201 tcgggactga tgtacagccg ccgcgccgtg gtgtcgagtg tggcgaaaag ctggtctttc
    10261 gcatatatgc ccgacttggt cagccggttg aacaggctgg atttgccgac attggtatag
    10321 ccgaccagcg caaacgtttt gattgtgccc gattcgcggg gcttgcggcg cagggcgcgc
    10381 tgttttttga ggttgacaag ctgttttttc aaggcattga tccgatgggc gatcaatcgg
    10441 cggtcggttt ccagtttggt ttcgccgggg cctttcatgc cgataccgcc gcgctggctc
    10501 tgcagatggc cgtaaccgcg tatcaagcgt cccgccaaat ggctcaattg cgccaactcg
    10561 acttgcagcc tgccttcctg cgtgcgggcg cggcgggcga aaatcgccag aatcagccct
    10621 accctgtcca atacgcggca tttcagttct ttttcaaggt tgcgttcctg cgtgggcgtg
    10681 agttcgtggt tgaatacgac caaatcgatg ccgtctgcgg caactgcttc tgacagctcc
    10741 gccgccttgc ccgtgccgac aaacagcgcg gtgtgcggac ggtcgcgttt ggcagtctcc
    10801 acgcgcacgg aatcgccgcc cgccgctttg accagctcga cagcttccgc caatgccgtc
    10861 tgaaaaccgt tcagacgggt ggcactgctg cccgtaccat ctttgtccaa cattacgccc
    10921 accagcatga cgcgttcggg ttgcgcttgg gtactgccgt tgccgcctgt tctgcctgtc
    10981 atgtattcaa tcctgtaaat aaagggttac gcctcgttcc gtttctcctt ccggtgcaag
    11041 cgtgatgcgg ctgcccgcca ttccgtcaac gctgaagacg atgccgcccg cctcgtgcct
    11101 tcctatggac aggcggctgc cgggtcgctg ccggtaggta taacgggtac acgcttccaa
    11161 acaccagcgt ccgcgccagt ggatgaaata tttttcgcct tttctaaccg caagtgtctc
    11221 gccgccgttt acctcaaaat aagggtaatc gggttttcgg gttctaaact gccatttcgc
    11281 ctgcgcgcgc cgtccgttgc ggacatagtc gaataccgcc gtataaagcg tgccgtattc
    11341 caaaggcttg agcggaaaaa gcgcgaattg gtacgcggtc agcctgccgt tggggtcgtt
    11401 gccggcggtt aaaaccctga cggggcggat ttcgttttta ccctgataca gcttgaaact
    11461 tttcatcgta attttgcctg ccgcctcgga aaaatcaatg ctggcaggat tgcccgtgat
    11521 ttcatattcc ggcacggggt ctggacgctc gccgtggaaa taaggcagtg cgccgctgcc
    11581 gacgggatag gctgtataga gcagctcctg tgcgggcatg gcttcgtcgg tgtacacgac
    11641 cgcaccgtta tggcaggcgt tgcggtaata tttccgtcct gcttccggct gatttctgcc
    11701 ttgggcgcaa tgccgctcaa acctgctgtt gccctgattg aatacgagaa cggttttacc
    11761 gttttcgcgc acaaatgccg ctcctgcctc atccgtatgg cggtcaagta gggaaaggcg
    11821 gtggtagatt gcgctcatta atccgtccac ttggcgttgc tgcgtgcgga tgtcgctgtc
    11881 ggacgattcg gcggcttcct cttccgtgct gatgttttca tgcacgccgt tgtagagata
    11941 cccggcaagg cgtgtgcgtt cggtcagctt ttgtgcggtg tagtgcggat tgtcgggatg
    12001 gtgttcgccg tgtccgtctt cgggattgag cgtgagatag cgtgcgtgcc tgcgggcgga
    12061 attttccaaa accggcgcgt gtgccagctt gtgcaaaccg atttgggcgc ggatgcggtt
    12121 gaggtagtgc agcgcatcgc cgccgtccct gatttgcggt gcggacggat agacaagttc
    12181 gcccgcgggc agggattggt tttgggtatg atagaaaacg cctgccgccg aacccaacag
    12241 gagcagccga ataaaaaggg atttcataat gccgtcctcc cgacgcggca acggggtgtt
    12301 ttatcaaaac ggcaaacttg ccaatgcggt ttccgattgc agattgccaa accggcaaac
    12361 ctttccccgt gccgatgccg aacctgatgc cgtctgaacc ttcagacggc atcggatgtt
    12421 tatttgtcca cccggatggg tgcaggttca tattgtgtcg attcgtcgcc gtaatacagc
    12481 acgccgagtt tgatggggat tctgccctgc gatttgcggt gggcattgga atcgcgcaag
    12541 gaataggcgc aaccgcaata ttcctgctgg tagaagtttt cacgtttgct gatttcaatc
    12601 atgcgcgcgc tgccgccgcc tttgcgccag ttgaaatccc aatacaccac atcatcgtaa
    12661 ggcgcggcgg cgcggtgtcc gcagtcgttg atttgcgcca tatttttcca gcgtgaaatg
    12721 cccagcgaac tggtaaagac ggggaacccg tgttcatgcg cgtattgcgc cgccttttca
    12781 aaacgcatat cgaaacacat ggtgcagcgg atgccgcgtt ccggctcaaa ctccatgcct
    12841 ttggctttgg caaaccattc tttgcggtcg ttttcgtagt cgtcgtcttt atcgatgaaa
    12901 ggaatgccga acttttccgc aaagcgcacg ttttcctctt ttcggagcat atactctttg
    12961 tgcggatgga tattgggatt gtaaaaataa atggtgtagt cgatgccgga ggcaagcatc
    13021 gcctccatca cttcgccgct gcacggggcg cagcaggaat gcagcaagac ttttttatgt
    13081 ccgccgggcg ggacgagtat ggggcggtca atgtcggtaa cggtaggttt gttttgtgtt
    13141 tccattaact taacaatatc tgttgaatac ggttgaagcg gctattttat cagagccgcc
    13201 gcatgtaaaa cagagtgtca gggcatcaac ccgagctgtc tgaacgaacg gacgctttgc
    13261 gaggtaacga taaaatggtc gagcagcgac acatcgacca gcgacattgc ctgtgccagc
    13321 cgccttgtga acatgatgtc ttcctgcgaa ggttcgggcg agccgcccgg atggttgtgc
    13381 gcgataatca ggctgtcggc atattcgtcc aatgccagtt tgacgatttc gcggatgtaa
    13441 atcgtgtttt ccgcaaccgt accgcgcgac agctctctga ccgcaatcag ttggttttgg
    13501 cggttcagca gcagcgcgac gctgacttcg actttttcct gccccaaatg aaagcgtaaa
    13561 taatcggcca ccgtatccgg atcggacagg acgatgctct cctgcaattc ttccgccaat
    13621 atccgccgcc cgatttccct gaccacggca aactgtgtga aacttgccgt ccccatccct
    13681 ttgtatgccg acagtttgcc gacctccgcg ctcatcagcc tccccaaact gccgaactcc
    13741 tgcagcaaat aacgcgccaa atcaaccgca ctcattccgc gcgtgccgac gcgcagcagg
    13801 attgccaaaa gttcggcatc actcaaagcc gccgccccgc gttccaacag cttttccctg
    13861 ggcctttccc cctccggcca ttgcttgatg ctcatgtttt ccctttttta aatagtctga
    13921 gatgccgtct gaaacaaatg ttcccacacg ccaaatatcc gaaatgccgt ctgaaccgga
    13981 tttccgcttc agacggcatc tgtatttcaa aacagtctta cgccgtttct tccaactcga
    14041 ttgaagccgc cagaagcgac aggcgtgcca ttacgccgta aacgtagagg cggttgtgtt
    14101 cgttgtccac gtcgcagtct ttttcagagc gcggcatacc cagcgagtcc cattgttcga
    14161 atacgcgctt gcaggcttcg ggcgcttctt gggaattatc gccgttaccg gtaggaatgc
    14221 tgttagacag cggaacaaac accataccgc cggcgttgag gttttcgtcc gcaccgcgcc
    14281 cttcgtgtac gcggaaaaag ccgccgatga cgaagcggtc catcatatac acgacgggtt
    14341 cgcacaccgc gctgtttaag gtttcataag tataaatccc ttcttggaca atcacttcgc
    14401 tgacttccaa accttctttg actttcgcca ttttattgcg gtttttacgg ttcaatccgc
    14461 gcacttcgtc ggcggatttg acgctcatca cgcccatgcc gtaagtgccg gcatcggctt
    14521 tgacgatgac gaaaggtttg tcggtaatgc ccgattcgtc gtatttggct tgaattttcg
    14581 ccagcacacg ttctaccgcc tccgccaacg cgtcttcgcc ttcacgccct tggaagtcca
    14641 aaccgccgat tttttcaaaa taagggttaa tttgccattc gtcgatgccg attaacttgg
    14701 caaattcggc ggcaacttgg ttgtacgcgc cgaaatgatt tgttttgcgg cgcgtcgtcc
    14761 aaccgccgtg caacggcggc aaaacggttt ggctgatgcc tttgaggatg tcgggaatac
    14821 cggcggacaa atcgttgttc aacaaaacca cgcaaggcga aaagccgtct gcaagatgga
    14881 cgcggtcgcg ggtacgcaat aaaggttcca acaggatttt gtcgcccaat gcggtttcaa
    14941 attcggtcgg ttcggttact tccggattca ggctgcccaa gcgcacttca taccctgccg
    15001 aacacaaaat ctcgccgagg gcgtaaacgt tttgcaggta aaacgtattg cgcgtgtggt
    15061 tttcgggaat aatcaatacg gatttcgccg tttcacaggc gcgttgcacc gcatcttgcg
    15121 cggcaaccgc cgccagcggg ataaagttgg gattcagatt attgaagccg ccggggaaca
    15181 aattcatatc gatagacgaa attttgtaac cggcattgcg tatatcgacc gaaccgtaaa
    15241 acggcgggcg gtgtacgctc cactgcgtgc ggaaccacgc ctcgattttg gcgtgattgg
    15301 acaggatttt tgcctcaaac gcctgaagtt gcgccgaatg ttcgggcgac atcaccggta
    15361 atttcatctt tcgtctgcct ctgtgtgttt tttgacaaga tgcagatgat aatgcctttg
    15421 aaagaatgac gacaagtatt ctttcgtatc gaatcatgct ttagatataa ctgtttactg
    15481 aaatggacaa tatgtctaat tttttcgtta aaattgtttg caaaataaca ccggctcaaa
    15541 aattagacaa aatttgttgc gcggtataaa gaatacgtct aaaatccgcc caatccgcat
    15601 taccatttat ccaaaagaac aacatcatga cagcacaaac cctctacgac aaactttgga
    15661 acagccacgt cgtccgcgaa gaagaagacg gcaccgtcct gctctacatc gaccgccatt
    15721 tggtgcacga agttaccagc cctcaggcat ttgaaggctt gaaaatggcg gggcgcaagc
    15781 tgtggcgcat cgacagcgtc gtctccaccg ccgaccacaa caccccgacc ggcgattggg
    15841 acaaaggcat ccaagacccg atttccaagc tgcaagtcga tactttggac aaaaacatta
    15901 aagagtttgg cgcactcgcc tattttccgt ttatggacaa aggtcagggc atcgtacacg
    15961 ttatgggccc cgaacaaggc gcgaccctgc ccggtatgac cgtcgtctgc ggcgactcgc
    16021 acacttccac ccacggcgca ttcggcgcac tggcgcacgg catcggcact tccgaagtcg
    16081 agcacacgat ggcgacccag tgcattaccg cgaaaaaatc caaatccatg ctgattgccg
    16141 ttgacggcaa attaaaagcg ggcgttaccg ccaaagacgt ggcactttac atcatcgggc
    16201 aaatcggcac ggcgggcggt acaggctacg ccgtcgagtt tggcggcgaa gccatccgca
    16261 gcctttctat ggaaggccgc atgactttat gcaatatggc gatcgaagcc ggtgcgcgct
    16321 caggcatggt tgccgtcgac caaaccacca tcgactatgt aaaagataaa cccttcgcac
    16381 ccgaaggcga agcgtgggac aaagccgtcg agtactggcg cacgctggtg tctgacgaag
    16441 gtgcggtatt cgacaaagaa taccgtttca acgccgaaga catcgaaccg caagtcactt
    16501 ggggtacctc gcctgaaatg gttttagaca tcagcagcaa agtgccgaat cctgccgaag
    16561 aaaccgatcc ggtcaaacgc agcggtatgg aacgggccct tgaatacatg ggcttggaag
    16621 ccggtacgcc attaaacgaa atccccgtcg acatcgtatt catcggctct tgcaccaaca
    16681 gccgcatcga agacttgcgc gaagccgccg ccatcgccaa agaccgcaaa aaagccgcca
    16741 acgtacagcg cgtgttaatc gtccccggct ccggtttggt taaagaacaa gccgaaaaag
    16801 aaggcttgga caaaattttc attgaagccg gttttgaatg gcgcgaaccg ggctgttcaa
    16861 tgtgtctcgc catgaacgcc gaccgcctga ccccggggca acgctgcgcc tccacctcca
    16921 accgcaattt tgaaggccgt caaggcaacg gcggacgtac ccacctcgtc agccccgcta
    16981 tggcagccgc cgccgccgtt accggccgct ttaccgacat ccgcatgatg gcgtaagtat
    17041 tttcaggcgg tctttaagaa tttgacgcgg ccgtctgaaa tatgtcccgt aaggcagaaa
    17101 cacctttaat attcaaacca aggagtttaa ccatgaacaa acttttcatt accgccctgt
    17161 ccgccctcgc cttgtccgcc tgcgccggca cttgggaggg cgcgaaacaa gacaccgccc
    17221 gcaaccttga caaaacacag gccgccgccg aacgcgccgc cgaacaaaca ggcaacgccg
    17281 tcgaaaaagg ctgggacaaa accaaagaag ccgtcaaaaa aggcggcaat gccgtcggac
    17341 gcggcatttc ccatctcggc ggaaaaatcg aaaacgccac cgaataaccg attcgcgatg
    17401 ccgtctgaaa ccgcttcaga cggcatcgtc agcacaagac gcaaacccat gaaagccttt
    17461 accaaaatta ccgccatcgt cgccccgctc gaccgcagca acgtcgatac cgacgccatc
    17521 atccccaaac aatttctgaa atccatcaaa cgcagcggtt tcggccccaa tgcctttgac
    17581 gaatggcgtt acctcgacca cggcgaaccg ggcatggaca acagcaaacg cccgttgaac
    17641 cctgatttct cgctgaacca gccgcgttac caaggcgcgc aaatcctgtt gacgcgtaaa
    17701 aacttcggtt gcggctcttc acgcgaacac gccccttggg cattggacga ctacggcttc
    17761 cgcgccgtca tcgcccccag cttcgccgac atcttcttca acaactgcta caaaaacggc
    17821 cttttaccta tcgtgttgac cgaagaacaa gtcgatcggc ttttcaaaga agttgaagcc
    17881 aacgaaggct atcagctctc catcgacctt gccgaacaaa ccctgaccac ccctggcggc
    17941 gaaacattca cattcgacat taccgaacac cgcaaacact gcctcttaaa cggcttggac
    18001 gaaatcggac tgaccctgca acatgccgat gaaattcacg cctttgaaga aaaacgccgc
    18061 caaagccagc cttggctgtt taacggttaa aacctatgcc gtctgaaggc cgttcagacg
    18121 gcatttctga taacatataa ttgctgcaac tgatgtaaac agagggatta tcaattgctt
    18181 tcatctttca agcgggctta gcaacgctct aaattaatgc aatacaactc tatttcaaat
    18241 aaatttttag atttttaata tgcaacaaat taaatttatt gacttatttt ccggaatgag
    18301 tggcatcagg aaaggattcg aacaagcctg tcggaaacag tcggttgctt gcgaatgtgt
    18361 ttttacttca gaaatcaaac cggcagcttt ggaagtattg aagcaaaact accctgatga
    18421 agtgccgtat ggagacataa cgaaaattga aacaggggat attcccgatt ttgacattct
    18481 gttggcaggc ttcccttgtc aggctttttc tttcgccgga aaaagattgg gctttgaaga
    18541 tacacgggga acgcttttct ttgatgtggc aaggatttta aaagcaaaaa aaccaaaagg
    18601 ttttattttg gaaaatgtgg aaggattggt gacacacgat agaaaagatt cgacacaaaa
    18661 atagggcgca ccctgaccgt tattttggaa accttggaag cattgggcta ctatgtttct
    18721 tggaaagttt taaatgcaaa agatttcggc attccccaaa acaggaagcg catttatctg
    18781 acaggcagtt tgaaatccaa acccgactta tctttcgaaa caagcccaag tccgaaatta
    18841 aaaaatattt tggaatcggg actgcctact gaaagcagcc ctttcatcaa gaaattgcta
    18901 aaaaaatttc ccccgtccga actgtacgga aaatcagtaa aagacaaacg gggagggaaa
    18961 aacaatattc acagttggga tattgaatta aaaggcgcag taaccgaaga agagaagcaa
    19021 ttgttaaata tccttctaaa agaacggagg aaaaaaaatg ggcttcagaa atcggcatag
    19081 attggatgga tgggatgcct ttgacaaaag cgcaaatttc aactttctat aaacaccccg
    19141 atctccaaaa tattttggac agcctgacag ataaaggcta tttggtttta gagcatccga
    19201 aacaaaaaat tggcgggcaa agaatcaaag atgaatccct gcccaaaggc tacaatattg
    19261 tttcaggtaa aaaatctttt gaaatcaata aaatattaga tccaaacgat gttgcgccaa
    19321 ccttggttgc aatggatatg gagcaccttt tcgtcgttga caacggcggt ttgcgtacac
    19381 ttaccggaaa agaagggttg cgcttattcg gctatccgga cgattattcg tttgatattc
    19441 ccaaaaaaga cagatgcgat ttattgggta ataccgttgc cgtccctgtg attaaggcgg
    19501 tatctgaaag acttctgcat actttataaa ccgacaggga taaaatgata aaacttactg
    19561 cacaacaaat atttgataag ttgctggatg aagaaaaaat cttatcggcc aatggtcaaa
    19621 ttagattttt cttgggcgat gtggatatta tcgtcaaaca aaaagatgtt gtcggcaaca
    19681 tcattcagga atggctcggc ggatgattga gaaaaaggga aattgaattt gatgtttcaa
    19741 ccaataccca aatgcctccc gatttctttt taaataaaaa agaccgcagc agagaattgt
    19801 tggaagtaaa ggcgttcaac cgaaataccg gcccgggttt tgatattgca gattttaaaa
    19861 tgtattctga tgaaatcatt cataagccct atatgctgga tgtagactat ttaatattcg
    19921 gttacgatat ggacgacaac ggcaatgtaa ccatcaagga tttatggctt aaaaaagtat
    19981 ggcaaattac gagaagcatg gatgggtggg caattaatct tcaagtcaaa aaaggcgtgg
    20041 tgcataaaat ccgcccgggt gtttggtaca gcataaataa aaagaatatg cctatgtttg
    20101 aatgcttgga agattttgtt tccgcaattg aagaaaccgt ttatcaaaac ccggcaacac
    20161 ggcataacgc atccttatgg aaaaagaaat ttgaggaagc ctataaaaaa cactacaacc
    20221 gatcgatttc catacctcgt tggcacgaaa ttgcacacaa atacaaaaag aaataaccct
    20281 tcaaccatca acccataagg aaacttgaaa tgaccaaaca tatcgccatc ctccgaggtg
    20341 acggcatcgg tcccgaaatc gtcgccgaaa ccgtccgcgt actcgacaaa ctcatcgccc
    20401 aaggtttgga tgccggctac gaatacgccc cattgggcgg cgaagcctat gacgaatacg
    20461 gtcatcctta tcccgaattt acgcaaaacc tctgccgcaa agccgatgcc gtcctgcttg
    20521 gtgcagtcgg ttctcctcaa tacgacaacc tcgaccgtcc gttgcgccct gagcgcggcc
    20581 tgttggcaat ccgtaaggat ttgaacctgt ttgccaattt gcgtcctgct gttttatatc
    20641 ccgaattagc caacgcctcc acgctgaagc ctgaaatcgt tgccggtttg gatattttga
    20701 ttgtgcgcga actcaccggc gacatctatt tcggcgaacc gcgcggcatc cgcgttctgg
    20761 aaaacggcga acgcgaaggc tacaacacca tgaaatacag cgaaagcgaa atccgccgta
    20821 tcgcccacgt cgctttccaa tccgcccaaa aacgcagcaa aaaagtctgc tccgtcggca
    20881 aagccaacgt tttggaaacc accgaactgt ggcgcgaaat ttttgaagaa atcggcaaac
    20941 aataccctga tgtcgagctt tcccatatgt atgtggacaa tgccgctatg cagttggtac
    21001 gcgcgcccaa acaatttgac gtgattgcca ccggcaacat cttcggcgat attttatcgg
    21061 acgaggcctc tatgctgacc ggctccatcg gtatgctgcc ttctgcttct ttggacgaaa
    21121 acggcaaagg cctgtacgaa ccgtctcacg gctccgctcc cgacatcgcc ggacaaaaca
    21181 aagccaaccc gctggccacc atcctctcgc tcgcaatgtt gctgcgttac agcctgaacg
    21241 acgaagcgcg cgcgcaacaa gttgaaaacg ccgtccaaaa agtgctgcaa caaggcttgc
    21301 gtaccagcga catttacgaa gaaggcacaa aactcgtttc ctgctccgaa atgggcgatg
    21361 cggtactcgc cgccttgtaa aaaaacaaag cgcggatcac accgcgcttt ttcatctgcc
    21421 cttttccgct cgccccgttc gtcaaccgcc tgcaaagcca ccgtttaccg gcaggaaatg
    21481 ccataaatcc ccgcctatgt taggataaac gcctttactg gctcacacaa aggattatca
    21541 tcatgaaaaa aatcatcttc gccgcactcg cagcggcagc cgttggcact gcctccgccg
    21601 ccacctacaa agtggacgaa tatcacgcca acgcccgttt cgccatcgac catttcaaca
    21661 ccagcaccaa cgtcggcggt ttttacggtc tgaccggttc cgtcgagttc gaccaagcaa
    21721 aacgcgacgg taaaatcgac atcaccatcc ccgttgccaa cctgcaaagc ggttcgcaac
    21781 actttaccga ccacctgaaa tcagccgaca tcttcgatgc cgcccaatat ccggacatcc
    21841 gctttgtttc caccaaattc aacttcaacg gcaaaaaact ggtttccgtt gacggcaacc
    21901 tgaccatgca cggcaaaacc gcccccgtca aactcaaagc cgaaaaattc aactgctacc
    21961 aacgcccgat ggagaaaacc gaagtttgcg gcggcgactt cagcaccacc atcgaccgca
    22021 ccaaatgggg cgtggactac ctcgttaacg ttggtatgac caaaagcgtc cgcatcgaca
    22081 tccaaatcga ggcagccaaa caataaatct tgatgcgaat cagcacaaat gccgtctgaa
    22141 cgtccttcaa acggcatttg tgccgtcttc atcaaaccgc cccgccaacg gtaagccgat
    22201 atggcggagc acaatccgcc gaaagatatt tcagcggcag gcagggcttg ccggaaagtc
    22261 cggaaa
//
LOCUS       DAXHKG010000015        21755 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.015, whole genome shotgun sequence.
ACCESSION   DAXHKG010000015 DAXHKG010000000
VERSION     DAXHKG010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.015"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(20..529)
                     /locus_tag="ACFMWP_000468"
     CDS             complement(20..529)
                     /locus_tag="ACFMWP_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HFC5891121.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
     gene            complement(861..1193)
                     /locus_tag="ACFMWP_000469"
     CDS             complement(861..1193)
                     /locus_tag="ACFMWP_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891122.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCAMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            1483..2319
                     /gene="cysT"
                     /locus_tag="ACFMWP_000470"
     CDS             1483..2319
                     /gene="cysT"
                     /locus_tag="ACFMWP_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HFC5891123.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
     gene            2571..3431
                     /gene="cysW"
                     /locus_tag="ACFMWP_000471"
     CDS             2571..3431
                     /gene="cysW"
                     /locus_tag="ACFMWP_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HFC5891124.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            3428..4501
                     /locus_tag="ACFMWP_000472"
     CDS             3428..4501
                     /locus_tag="ACFMWP_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HFC5891125.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKEQICTKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(4558..6084)
                     /gene="ilvA"
                     /locus_tag="ACFMWP_000473"
     CDS             complement(4558..6084)
                     /gene="ilvA"
                     /locus_tag="ACFMWP_000473"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HFC5891126.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSHGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGDETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            6232..7401
                     /locus_tag="ACFMWP_000474"
     CDS             6232..7401
                     /locus_tag="ACFMWP_000474"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HFC5891127.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWARLTGQ"
     gene            complement(7526..8098)
                     /locus_tag="ACFMWP_000475"
     CDS             complement(7526..8098)
                     /locus_tag="ACFMWP_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HFC5891128.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(8165..9148)
                     /locus_tag="ACFMWP_000476"
     CDS             complement(8165..9148)
                     /locus_tag="ACFMWP_000476"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HFC5891129.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            complement(9315..9390)
                     /locus_tag="ACFMWP_000477"
     tRNA            complement(9315..9390)
                     /locus_tag="ACFMWP_000477"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9355..9357),aa:Gln,seq:ttg)
     gene            complement(9399..9474)
                     /locus_tag="ACFMWP_000478"
     tRNA            complement(9399..9474)
                     /locus_tag="ACFMWP_000478"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9439..9441),aa:Gln,seq:ttg)
     gene            complement(9487..9562)
                     /locus_tag="ACFMWP_000479"
     tRNA            complement(9487..9562)
                     /locus_tag="ACFMWP_000479"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9527..9529),aa:Gln,seq:ttg)
     gene            complement(9570..10415)
                     /gene="ispE"
                     /locus_tag="ACFMWP_000480"
     CDS             complement(9570..10415)
                     /gene="ispE"
                     /locus_tag="ACFMWP_000480"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HFC5891130.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVDGMPQEADLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCSRTTQQLIDLGATLGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRDSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            complement(10425..11006)
                     /locus_tag="ACFMWP_000481"
     CDS             complement(10425..11006)
                     /locus_tag="ACFMWP_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HFC5891131.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPLVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGIPSETETPERCAARTR"
     gene            complement(11146..12984)
                     /locus_tag="ACFMWP_000482"
     CDS             complement(11146..12984)
                     /locus_tag="ACFMWP_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC5891132.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVGKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTGEQRGRAAMTAAMIYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMFALSKLPDKREALRGLDKIIEKPPAGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            complement(13149..13985)
                     /gene="panC"
                     /locus_tag="ACFMWP_000483"
     CDS             complement(13149..13985)
                     /gene="panC"
                     /locus_tag="ACFMWP_000483"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HFC5891133.1"
                     /translation="MQIIHTIQELRAWRKNAGTVAFVPTMGNLHEGHLALVREAKKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            complement(14108..14899)
                     /gene="panB"
                     /locus_tag="ACFMWP_000484"
     CDS             complement(14108..14899)
                     /gene="panB"
                     /locus_tag="ACFMWP_000484"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HFC5891134.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTESVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTVKFVKNFMQGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            complement(15041..15116)
                     /locus_tag="ACFMWP_000485"
     tRNA            complement(15041..15116)
                     /locus_tag="ACFMWP_000485"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15081..15083),aa:Thr,seq:tgt)
     gene            complement(15151..15226)
                     /locus_tag="ACFMWP_000486"
     tRNA            complement(15151..15226)
                     /locus_tag="ACFMWP_000486"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15191..15193),aa:Thr,seq:tgt)
     gene            15392..16183
                     /locus_tag="ACFMWP_000487"
     CDS             15392..16183
                     /locus_tag="ACFMWP_000487"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HFC5891135.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            16238..16879
                     /locus_tag="ACFMWP_000488"
     CDS             16238..16879
                     /locus_tag="ACFMWP_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC5891136.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(16957..17880)
                     /locus_tag="ACFMWP_000489"
     CDS             complement(16957..17880)
                     /locus_tag="ACFMWP_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC5891137.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGATLDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            18044..18913
                     /locus_tag="ACFMWP_000490"
     CDS             18044..18913
                     /locus_tag="ACFMWP_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HFC5891138.1"
                     /translation="MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENSRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDDKNPALIGFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPVVLSLTAAYRINGSKTLSSNTKYKAGNYWMLNPNISFAAN
                     DRISLTGGIQWLGKQPDRLDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            18956..19429
                     /locus_tag="ACFMWP_000491"
     CDS             18956..19429
                     /locus_tag="ACFMWP_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891139.1"
                     /translation="MKKQITSAVMMLSMIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            19991..20263
                     /locus_tag="ACFMWP_000492"
     CDS             19991..20263
                     /locus_tag="ACFMWP_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891140.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIG
                     YVLIKNILVSVSDEDGTKYLAIYLSNLFFGTVLMYVLVKRLSKKPS"
     gene            20426..20971
                     /locus_tag="ACFMWP_000493"
     CDS             20426..20971
                     /locus_tag="ACFMWP_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891141.1"
                     /translation="MKKQITAAMMILTMIAPAMANSMDNQIFENQVFHTRADAPMQLA
                     ELSQKEMKETERAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            20953..21318
                     /locus_tag="ACFMWP_000494"
     CDS             20953..21318
                     /locus_tag="ACFMWP_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891142.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            21376..>21755
                     /locus_tag="ACFMWP_000495"
     CDS             21376..>21755
                     /locus_tag="ACFMWP_000495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891143.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
BASE COUNT         5546 a         5828 c         5081 g         5300 t
ORIGIN      
        1 ctataattga tgaaacgggt taaaaaagtg ttgccatcgc ctgttcttct tgtcggatac
       61 gcttaaataa gaccagcaaa taaatgggca ggccaatcaa taaaacatac cacgcttgac
      121 ataataaggc gatgccaatc agttcgggta tgatgtttaa aaaataattg gggtggcgga
      181 atgttttaaa caaccacgaa cgattaattt gatgatttgg taaaatatag attttaaccg
      241 tccaaatctc ccccaactgc ttaataatca atgacaatat cacaaacgaa gccatcaccg
      301 tcagcgtacc aatcaaggat atgccattaa aagcagtgtc agaaagccat acccaaacaa
      361 aacacgccaa ataataaagc gtatgaactg ccgcaagcag cgtggaattg gtttttccgt
      421 attgttttgc ccctttggca atcaaggctt tttcatgttt aatagagacg gctaaaaata
      481 acagtctgat gataaaaaac aggcttaaaa tgcttaaaat cattgtcatt gatgtttttc
      541 cattgaaatt gaaataaata taaatcggat taatggtatt tttaattaat gatgtttcag
      601 accatcatgc tctataaaca attcccatta agtccgcgcc gcaacctgct ataataagtc
      661 tgcaatcggc gcaaatcaat gctttgcgtt tattgccatc ccaaaataat tgatgctgcc
      721 ttaattataa taccaagata agttttttta ttcaataaaa tacaaaggga agcgttcagc
      781 ccattgcaaa cagatgcaat ccaccgatta tttaaaaaac ggcaaagcct tgcccccctt
      841 gcggcaagcc tgcaatgcct ttaatgtccg caggcgcaag cgtcgccgtg gtgcccgcaa
      901 ccctgtgccg tttcgagcca ttcgtcgtca tcgccgtcaa actcttccac ttcgtcaaac
      961 tcgccgcgtt ccaccatggc gcacaactct tcaaggcttt ccgcgccttc cacccaaaaa
     1021 cagggaatgc ccggcggcgt atcgggcgca agcagtgccg ctacgccttc atgccacgca
     1081 atccaatagc cgttgtccgt acggacgaat tgtgcgtttt cgttgaccga ctcgccttcc
     1141 gtaccttcca gcatacgttc cgcaatgtcc ggttgaaaag ataaaatctg cataagtgtt
     1201 cctttatatg atggttttcc gtcaaaacaa ggtgttatag tggattaaat ttaaaccagt
     1261 acggcgttgc ctcgccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct
     1321 gatttttgtt aatccactat attttaaaac atcgcgcccg cttgagaaac tgccaaccgc
     1381 tttataacaa attcgtcttt gcaccaaact ttccattctt tccgtttttc ggacggcatc
     1441 gttaaagtag tccttccttt tccttatttt cagcattgtt ttatgttacc gctcaaaacg
     1501 cccggcgtac tgcccggctt caaactcagc cttggtctga ccgtattgtg cctgtcgctg
     1561 cttgtggtct tgccgtttgc gatgatggcg gcgaaggcgg cggaaatcgg ctggggcggc
     1621 ttttggaaca cgattgccga acccaatgtc ttggcggccg tctggctgag tttgcggatg
     1681 tcgttttatg cgatgctgac caatgtcgtg ttcggcacgc tggtggcgtg ggtattggtg
     1741 cgttatgaat tcccgggcaa gggtctggcg aacgcgctgg tcgatttgcc gtttgcgctg
     1801 ccgacggcgg ttacgggtat cgcgttggcg accctgtatg cgcccaacgg ttggataggc
     1861 cgttttttcg agcctttggg catcaaaatc gcgtttacgc ccgtcggcat ttggattgcg
     1921 ctggtcgtcg tcagcctgcc ctttatcgtc cgcgccgtgc agccggtgtt ggaggaatta
     1981 tcgggcgaat atgaggaagc ggcggcgact ttgggcgcaa accgctttac gacgttccgc
     2041 cgcgtgctgc tgccggaaat cacgccggca ctcttgactg gcgcgggaat gatgttcgcg
     2101 cgggcaacgg gggaatacgg ctcggtgatt tttatcgcgg gcaatattcc gatggtttct
     2161 gaaatcctgc cgctgattat tacgggcaag ctggaacagt tcgacgtaca gggcgcgtcg
     2221 gcggtggcgt tgtttatgct gctggtttcg tttgtgattc tgtttgcgct gaacgtgatg
     2281 cagtgggcgt tgggcaggcg ttcgggcgcg aagggttgag gtcgtctgaa atacctgtta
     2341 ccgtcattcc cgcgcaggcg ggaatccatt ggtgaatttc ggctgcctta tttattttct
     2401 gttttcctgt tgccctgtgg tggattcccg cctgcgcggg aatgacggta gctagacgtt
     2461 tttattccct taatcaataa aaggttgtct gaaaacgaat ccgctcccaa aaacacagtt
     2521 tttcagacga cctccaaaca ttttaaaacc aaccagagaa caccaccgcc atgaaaccct
     2581 attccgccaa tcccaacctg accgaaccgc gtcggctgcg cgtgttgctg attgccgccg
     2641 cgctgggctt tctgctgctg atgctggtcg tgccgctcgt cgccgtattt tacgaagcct
     2701 taaaaggcgg ttgggatttg tacctgaaat ccttaaacga tcccgaagcg tggtctgcca
     2761 tcaaattgac gctgattacc gcgctgattg tcgtccccgt caatgccgtc ttgggcgtgg
     2821 cgatggcgtg gctgctgacc cgttttgatt ttcgcggcaa gcagttgctg actaccctgc
     2881 tcgatttgcc gttttccgta tcgcccgtgg tggccggttt aatgttcgtc ttattgttcg
     2941 gcgcgcacac ggcattgggt ggctggctcg aagcgcaagg catacagatt atcttcgcca
     3001 tccccggcat tattctggcg acgctgttcg ttaccttccc ctttgtcgcg cgcgaaatca
     3061 tcccgctgat gcaggctcag ggcgacagcg aagaacaggc ggcattgata ctcggcgcaa
     3121 gcggctggca gatgttttgg cgcgttaccc tgcccaacat caaatgggcg ttactctacg
     3181 gcatcatcct caccaacgcc cgcgcgatgg gcgagttcgg cgcggtcagc gtggtatcgg
     3241 gacacatacg cggcgaaacc aacaccgtcc cgcttttggt cgaaatcttc tacaacgaat
     3301 acaacttcac cggcgcattc gccctctccg gcgtattggc acttttggca ctggcgacgc
     3361 tggcggtgca gaacatcatc accaaattac aagacaaaaa actcgccgcc gccgaaagga
     3421 acgcagtatg agtatcacca tccaaaactt aaacaaacac ttcggcaatt ttcacgcgct
     3481 gaaaaacatc aacctcaacg tccccaccgg caaactcgtt tccctgctcg gcccgtccgg
     3541 ctgcggcaaa accacgcttt tacgcattat cgccggactg gaaaacgccg acggcggcaa
     3601 gattctgttt gatgggcaag acgtaaccgc caaacacgtc cgcgagcgca aagtcggctt
     3661 cgtgttccaa cactacgccc tcttccgcca catgaacgtg tttgacaacg tcgctttcgg
     3721 tttgaccgta ttgcccaagt ccgaacgccc gtccaaagaa caaatctgca ctaaagtcga
     3781 agaattgctg aaactcgtac aactctcgca tttggcaaaa tcctatccgc accaactctc
     3841 cggcgggcaa cgccagcgca tcgccctcgc ccgtgcgctt gcggtcgaac cgaaactcct
     3901 gcttttggac gaacccttcg gcgcgttgga cgccaaagta cgcaaagaat tacgcacctg
     3961 gctgcgcgat atccatcaca acctgggtgt aaccagcatt ctggttacgc acgaccaaga
     4021 agaagccctc gaagtttccg acgaaatcgt cgtgatgaac cacggcaaaa tcgaacaaac
     4081 cggcagcgcc gaagctattt accgcaaacc cgaaaatgcc ttcgttaccg agttcctcgg
     4141 cgaaaccgac gcttttgaag gacgcatcga aaaaggcttc tggcattata acggcttcgc
     4201 gtggaaattg gacgcacaat acaaatggca ggaacaaacc gccaccggct atatccgccc
     4261 gcacgaatgg cagatcgccg ccgaacacga aacaccgatg atttgtgccg aaatcgaaaa
     4321 agtccacgcc gtcggggcat tgacgcatat tttggtgaaa cacggcaaac aagacgtgca
     4381 tatcacgctg gctggcagcg atgccgcgcg ttacccaatc gccgaaggca aagaattgaa
     4441 gctgattccg aaacaggttt atgtcttctc tcaaaacgaa ctgattgaat attcgattta
     4501 accatgaaag cgcaatgccg tctgaaaggc tttcagacgg cattgtgctt tcaagcgtca
     4561 ggcaagaaac agcttgtacg cggcattttg cgtttcctcg tgatagctgt atcccagact
     4621 ttccaagaaa ccgtcaaatg cggcggcatc gtgcggcggc acatcgatac cgaccaaaat
     4681 ccgcccgtaa tccgcaccgt ggttgcggta atggaagagc gtaatgttcc aaccgccctg
     4741 catatggttc aaaaaacgcg ccaacgcccc cggacgctcc ggaaactcaa aactgaccaa
     4801 acgctcgttt tctactttgt ccgtccgccc tccaaccata taacggatat ggattttggc
     4861 aatctcatca tcagtcaggt cgacattggg caatcccgcc tcatccaacc ggctgccgat
     4921 aaccgccaaa tcctgcgggc ctgccgcttg aagtccgaca aagatatgcg ctttttcatc
     4981 gtctccgtag cggtagttga actcggtaat attcctattt cccaatatat tgacaaactt
     5041 aaggaagctg ccgcgttctt cggggatggt aacggcaaaa ataccttcgt tgccctcgcc
     5101 caattcacta cgctccgaca catggcgcaa acggtgaaaa ttcatattcg caccgctggt
     5161 aacggcaatc agggtttggt tttccgcgcc ttctcgggcg atataggctt tcagacccgc
     5221 caacgccaac gcgcccgccg gctcggtaat gctgcgcgtg tcatcgaaaa tatccttgac
     5281 cgcgccgcaa accgcatcgg tatcgactgt aatgatttca tccaaaagtt ctttgcagag
     5341 gcggaaggtt tcgtctccga caactttgac cgcagtgccg tctgaaaaca gcccgacatc
     5401 tttcaaatgg acgatttcac ccgcttcgac cgactgcttc atacagcagg aatcgttggt
     5461 ctgaacgccg ataactttga tttcggggcg gacctgcttg ataaatgccg ccacgcccgc
     5521 cgccaaaccg ccaccgccta tcggtacgaa tacggcgcgg attggatcgg gatgctggct
     5581 gacaatttcc atccccaccg tcccctgtcc cgcaatcaca tcaggatcat caaacggcgc
     5641 gatataggtt aacccttctt tttccgccaa ctccatcgca taatcgtagg catcgttgta
     5701 tgaaacgccc cgcaaaacca cctcgccgcc atggctttta accgcatcca ctttgatttt
     5761 cggcgtagtt tccggcataa cgataacggc acggcaaccc aaacgctgtg cggacaatgc
     5821 cacgccttga gcatgattgc ccgcgcttgc cgcaatcacg ccgcaagcga gcgcatcttt
     5881 cggcaacttg gacattttgt tgtacgcgcc gcgtattttg aacgaaaaaa ccggttgcaa
     5941 atcttcgcgt ttcaaaagga tgttgttttt caaacgtaca gaaaggctgc gtgccggttc
     6001 caaaggcgtt tcgaccgcga catcatagac agatgccgtc aggatgcgga tgaggtaatt
     6061 ggaataagga aggggcgtgt tcataattca atatgggata atcggtttat taaaatcgca
     6121 aaacccaaaa ccatacgccc aagacggcgc gaaagcaaga aaaatccgcc cgatcagaca
     6181 ccctaagcgt ataatcggca gactgaaaca cgcacacaat tagaatattt catgacagca
     6241 cataaaatcc tgcccgtcct gctttccatc atcttaggcg tttctcacgc aacggccgca
     6301 tcgcccgcgc ccaacaaacc ggcggtacac gccgccccca cgttccaaac acccgaaacc
     6361 ctcacagcgg cacacatcgt tatcgacctt caaagcaaac agattttatc cgccaaaaac
     6421 atcaataccc ctgtcgaacc ggcggcacta acccaactga tgaccgcata tctggttttc
     6481 aaaaacatga aatcgggaaa tatccgatct gaagaaaact taaaaatacc cgaatccgca
     6541 tgggcttcag aaggaagcag aatgtttgta cgtcccggcg atacggtcag caccgacaaa
     6601 ctcttaaaag gcatgattgc actatccgca aacgatgccg ccctaaccct tgccggccgg
     6661 ctgggcaacg gctcgattga aaattttgtg caacaaatga acaaagaagc ccgacgcttg
     6721 ggcatgaaga acactgtatt caaaaatccg acaggcttga gtagagaagg acaggtttcc
     6781 accgccaaag acctcgccca gctgtctgaa gcattgatgc gcgactttcc ggaatattac
     6841 ccgctgtttt ccatcaaatc tttcaaattc aaaaatatag agcaaaacaa ccgcaatatc
     6901 cttttatata gggacaacaa tgtaaacggt ctgaaagccg gacacacaga aagcggcggc
     6961 tacaaccttg ccgtgtcata ctccggcaac ggcaggcaca tccttgtcat cacattgggt
     7021 tcggaatcgg cggaaacacg cgcatcagac aacagcaagc tgctgaactg ggcattgcag
     7081 gccttcgata cgcccaaaat atatccgaaa ggcaaaaccg ttgcccaaat ccaaatttcc
     7141 ggaggcagca aaaaaaccgt ccgcgcaggc ttcctcaaag aagcctacat cactctgcca
     7201 cataaggaag cgaaaatggc agaacagatt ttggaaacca tacagccgat tcccgccccg
     7261 gtaaaaaaag ggcaaatttt aggaaaaatc aaaatcagac aaaacggata caccattgcc
     7321 gaaaaagaaa tcgtcgcact ggaaaatgta aaaaaaagaa gccggtggca aaggctttgg
     7381 gcgcgtctga cagggcagta atctgctatt tcaaatatcc cgtttttcca acaaataaag
     7441 aaatgccgtc tgaaacacgg ttcagacggc ataaaacaac agggcggtac gtattgcata
     7501 cgcgccgccc tgctgctgaa atcaattagc gtttcttacc ggtaacggta gcaacagcca
     7561 gattttcgtt acgtttcagg gaaacgcttt ctacaccttc aggcagtttg atgtctgaca
     7621 agtgcagaat gtcgccggca accacttcag cacaatccaa atccaagaaa gcagggatgt
     7681 tggcaggcaa agcaactact tcaacagaag tgtttaacag agatacgcgg ccgccttgca
     7741 gtttgaccgc ttgggaattt tcagcgttaa cgatgtgcag gggaacgcgg atgcgtacgg
     7801 gttggtctgc tttcacagct tggaagtcga tgtgttgaac ttcgcggcgg aacgggtgca
     7861 tttggaaatc gcggacgata acgtctttgg tttcaccgtt cagagacaac ttaatcaacg
     7921 cagtatggaa agattctttt tccaatgcgt agaatacggt tttgtgatcc acagcgattg
     7981 caacaggctc ttgaccttca ccgtacagaa tgccggggat ttggccttcg cgacgcaggc
     8041 ggcggctcgc accagtgcct tgtgcttcac gaacagaggc ttgaatttca taagtcatgt
     8101 taaatactcc aagttaggta aaatcgccgt catcggccgc gaccagctta agacggcttc
     8161 gggcttatgg cagcaacatg ctgcctgtca tcacttcttc attgaaaaga tatgagacgg
     8221 attcttcatt gctaatgcgg cggacggttt cggccaacag accggcaatc gttacctgac
     8281 ggatacggtc gcagttttta gccgcttcag acaaaggaat ggtatcggtt acgaccacct
     8341 ggtcgatttc ggatgaggcg atacggctga ccgcctctcc ggagaatacg gcgtggctgg
     8401 cataggctag aacacgttca gccccccgct ctttcagggc gacggcggct ttgcacagcg
     8461 tatttgcagt gtcaatcata tcgtccacaa tcagacaggt tctaccttga atatcgccga
     8521 tgatgttcat gacttccgcc acattggctt tcgggcggcg tttgtcgatg attgccaagt
     8581 cggcattcag ggattttgcc acggcgcggg cgcggacgac accgccgatg tccgggctga
     8641 cgacggtcag attttcaatc cgctgttgtt tgatgtcgtt caacagaatc ggggtggcat
     8701 aaatattgtc caccggaata tcgaagaaac cttgaatctg gtcggcatgc aaatcgacag
     8761 tcaaaacacg gtcgatccct gccgaataca gcatatttgc caccagtttg gcagaaatcg
     8821 gaacgcggac ggaacgcgga cggcggtctt ggcgcgcata gccgaaatac ggaatggctg
     8881 tggtaatacg acctgccgaa gcacgcttca gtgcatccgc catcgtcagg atttccatca
     8941 ggttgtcatt ggtcggcgca caggtcggct gaaggatgaa aacatcgcgc ccgcgtacgt
     9001 tttccaacag ttcgacggca acttcgccgt ctgaaaactt ggatacggaa gcattgccca
     9061 aagaaatgtc caaatgcctg acaacacgtt gtgccaattc gggattggca ttgcctgtaa
     9121 ataccatcaa actgtcgtac gcagccatat tctcacctga ttttatgttt aacttccgct
     9181 cagaaaacac aatgcttccc tctgcttgta ccaagcccga cattatacct gcaacatccg
     9241 acacaaacaa aggcatttca atatttttat ttctatgaaa taaaagcgtg taagcaggct
     9301 tacacgcttt tatttggctg gggaggaagg attcgaacct tcgcatgctg gaatcaaaat
     9361 ccagtgtctt aaccgcttga cgactcccca aaaagggctg gctggggagg aaggattcga
     9421 accttcgcat gctggaatca aaatccagtg tcttaaccgc ttgacgactc cccaactcgt
     9481 ttggcttggc tggggaggaa ggattcgaac cttcgcatgc tggaatcaaa atccagtgtc
     9541 ttaaccgctt gacgactccc caacaatgtt tatacggaca acaaaggatg ttttgaaaga
     9601 ccctctgcca aatatgcctc gtacaaacct gaaacttgtc ggtatatatt gtatgcgcta
     9661 tccctatctt gacacgccgt gaatacacac gcaccagaac ctgtcattaa ggcaaatcca
     9721 tatcgggaca attcggaata ggctttccaa acttcagggt attctttaaa tacaactgcc
     9781 tgcatatcat ttctaaacgg ttgcaggttt tggaaagtcg gcattatgct tgaggcggaa
     9841 tttcgtgtca agccttcgtg tgtgaaaatt tttgcagtgg aaacgtggac gggcggtttg
     9901 acgatgacat accactgttt cggaatatcc attcctatca gtttttcacc tatcccgctt
     9961 gcaaaagcat tttttccgaa aataaaaaat ggtacgtccg cacccaaagt tgcgcccaag
    10021 tcaatcagct gctgcgtcgt tcgggaacac tgccaccaac ggttcaacac cagcaaaacg
    10081 gttgccgcat ccgagcttcc gccgcccaaa cccgcccctg tcgggatttt tttgtccagc
    10141 catatttcca cgccggcggg gttgcgcgca tatttttgca gcaacgatgc ggcacggtag
    10201 ctcaaatcgg cttcctgcgg catgccatca accggattgt gcaggatgat tttgccgtcg
    10261 tccctcggtt tcaaatatac ggtatcctgc aaatctatca agcagaatat gctttcgata
    10321 ttgtgataac cgtcttcccg cctgccggta atcctcaaat cgagattcag ttttgcaggt
    10381 gcgggaaacg cctgccgtcc gtccgcaata ttcatctgtc cgccttatct cgtgcgcgcc
    10441 gcacagcgtt ccggggtttc ggtttcagac ggaataccga tttcggtgaa aaccagcctg
    10501 atgttcaaat ttccgttatt cagttgcaac gttcggactt gccccccact gtcggcggtt
    10561 ctgccgacag tccaaccgta ttgttccaat atgccgtccg gcaggatgcg gtaaggcgcg
    10621 cccgccacac gcctgccatc tgcccagata tgcagatatt ggattggcag tttgaaaccg
    10681 accagctgcc tgctcaattc ttccgcactt tccgcctgat agacatttcc tttgccgtcc
    10741 actgccaatg cgccgtccct gtcttgacac aactgcccga gcgtactgcc caaaggggta
    10801 ttgatattga tggtttccac gagcggttgg tatgtccaat cgaaatttgc atacgaacct
    10861 ttcccttccg ctttcactgc caaccgccct tctgctgcaa aactgctgat gtgttcggac
    10921 ggctgccaca ggttttcgtt attttgaggt aattgcgcac aagcggtcaa aagcaggatg
    10981 accgatgcgg atacggtgtg tttcatcaga atttccttaa cgggtgccat cctgccggcc
    11041 ggcgggttcg gcgtgccgtg caaaacgcgt gcgaactgcg tgcggtttgc ccgaatgccg
    11101 cagcttcccg gcaaacctta tgccgtctga aaggatggac ctgcattatt tccggggttt
    11161 gcgggaaggt tggggcaatg cgatgccgtg acgtttgagc gtttcccgcc atattttctt
    11221 gtctcccgta aggtgtgccg cctgcgtcca tacgtcaacc gcctgatcgc gttcgcccaa
    11281 tgcccacaac acttcgccca aatgggcggc aacttcgggc tcggggtcgt tttcaaacga
    11341 ataccgcaga tacggcagcg cgctttccgc gtcgcctttc aggtaatacg cccagcctat
    11401 gctgtcgttg acagcggtat cgtccgggtt gatttggtat gccgtctgaa gcagggcgaa
    11461 gccttcgtcc aaacgtttgg aatcggaaag caggctgtag cccagattat tcataatctg
    11521 agcgttatcg ggtgcaagcc tgaacgccct ttcaagatct gaaatcattt ttttccgctt
    11581 gccaagccga tcgtaaacaa ctgaccgctg taccaatgcc tctgcctgta actctgtatt
    11641 actgccggca ggcggttttt cgataatctt gtccaacccc ctcaaagcct cccgtttgtc
    11701 gggcagcttc gacagggcga acatctgtat tttggacaaa ttgtctgccg taaaataccg
    11761 cccctgctgt tcgggaagtt tccgcaccct gccgatctgc cgcaaagccg ccctgccgcc
    11821 gtccaactcg acagccgccg cagccgccag cacacctttg tcgaacaggt attccggagc
    11881 ggacactttt ttcaaccact gcctgacttt ggtgtaatcc cttcggtcgg catatatcat
    11941 cgccgccgtc attgccgccc tgccccgctg ttcccccgtc cccctgccgt atgccttttc
    12001 ggcgtagccg tcgataacgg aagcaccttc ttttcggttt gccgccaata tcgctgcctg
    12061 aatatacagg tctgcattcg gattgcgttc caacagcacg ttcaaacgcg cataggcatc
    12121 atccagcctg tgcagggaaa ccagattcat aatttccatt tcctgccaga cggccgaaag
    12181 gttttgggtg tctgtctgct cgaaaaagcc gtcgagtatt tcgggatatt tgcgtgcagt
    12241 cagacgcaac gtcattaaag tggggggcaa tatttccgta tcgagcttcg ccaaacgctg
    12301 caaagctccg attgcctttt ccttttcgcg tccctgtacg ctgaacacca catcggcaac
    12361 cgccgcttcg ggcagatgtt catatttcaa cgccgcacgg cgaaccgctt tcgatgcttt
    12421 ttgcgccaac ccgtcctgtt gcacggcggc ttgtgccaac aataaaaaca ccctgcggtt
    12481 ctgtccttcg tccgcctgag ccagcacttc ttccagtccg tctagatgct gatttcctct
    12541 ttccctcagc acgttccgca gccaccccgc ccgtttttgc gccttacccg gtataggctc
    12601 aatctgccgc catttctgat aaatcatttc cgcctgttca aacgcgttca gcgacacggc
    12661 catttccaag gcgcgttcgg cgacttcggg ggattttgtg cgttccaaca tcagcatata
    12721 ggttgccaga gccgttcccg cctgcccctt ttgcaaggcg gtttcccctc ccagcaacgt
    12781 aaatatctga ttaacccgct cgcccactgc cgcaagccgt gcgcgttcgt ttttgatttc
    12841 ttcctcgctg taacgctgct gctttctgaa aacctttccg acttccttcg gcggcttcgc
    12901 atccgccgcg ccggcggcat acgcctgccc ggcaagcagg gctgccgcga gcacagataa
    12961 aatggtgaaa cgggcgggta acataatctt cctttatccg acagccgtcc gaaccttcag
    13021 acggcatata atcaggcgta actttatcac aagcagaatc gtttgtagat ttgcgaaacc
    13081 ccgttcaaaa aaataaatgc cgtctgaaac gcaaatccgc ttcagacggc attcccgacg
    13141 cttgcggttt aagggagttt tatttccaaa ttgtcaatca ggcgcgtcgt ccccagacgg
    13201 gcggcggcca agaccaccag tttcttatct cccgcccgcg ccacttcgag cgtatcggcg
    13261 cggcggattt cgacataatc gaccacccag cccgcagcgg tcaaatggtc ggcagcctgc
    13321 cgctccaaac ctgcataatc caaactgccc tgcgccaagg attcggcaac agcctttaat
    13381 tcgcggtaca ggcgcggtgc ttcgtcgcgt tccgccgcac tcaaatactg gttgcggctg
    13441 gagagtgcca aaccgtcttc cgcgcgcccc gtatcgacag gcactatttc aacatcaaaa
    13501 ttcaaatcct cggtcaaacc tttaatcacg gcaagctgct gatagtcttt tttgccgaaa
    13561 caggcaacat ccggcgcgac aatattgaac agcttggaca ccaccgtcgc caccccgcgg
    13621 aaatgtcccg gacgaaactt gccgcacaac tcattttgca gattgggcgg ttcgacgttg
    13681 taacgctgtt ccacgttcgg atagagttct ttctcatcgg gcgcgaaaac aacggcaaca
    13741 ccctcggctt ccagcttgtc cgcatcctgt tgcaaagtac gcggatattt gtcgaaatcc
    13801 tcgccctgac cgaattgcag gcggttgacg aatatgctga caacaacgtt gtcggcgcgt
    13861 tttttggctt cgcgaacgag ggcaagatgc ccttcgtgca gattgcccat ggtcggcaca
    13921 aatgccaccg ttcccgcatt tttacgccac gcgcgcagtt cttgaatggt atgtatgatt
    13981 tgcataacgg taatccttat ccttcgggct tcctgcccga caaaacgcgc cgattatacg
    14041 cgccgcgcac ggcaaaacaa aatgccgtct gaaacggctt tcagacggca tcggcagcaa
    14101 accttgttca gtctgcaaaa atatgttccg cagcagggaa ggttttggct ttgacttcgg
    14161 caacatacgc ccgaaccgcc gcctgaatgc tgctttgccc ctgcataaag tttttgacga
    14221 atttcaccgt cttacccggg aaaatgccga gcatatcgtg catcaccaaa acctgcccgt
    14281 cgcaatcgac acccgcgccg atgccgatgg tcggacagga aacggattca gttacctttt
    14341 ttgccagttc cgcaggaaca cactccatca gcacgaccgc cgcccccgca tcatcatgcg
    14401 ccttggcatc gttaagcaac gcctgcgcct tgccgccgcg cccctgaacc ttgtatccgc
    14461 cgaaggcaaa cacggattgc ggggtcagac cgatgtgggc acagaccgga ataccgcgca
    14521 tttgcagaaa ttcggtcgtt tccgccatcc acacaccgcc ttcgagtttg accatatgcg
    14581 cgccggcagc catcagttcg gcggcggcgg caaacgcctg ctccttactc tgctgatatg
    14641 caccaaacgg caaatcgctg acaatcatcg cattttttgc accgcgtgct acacattcgg
    14701 tgtgataaca catatcgcgc aggctgacgg gcagcgtcga ctgccgccct tgaaccgcca
    14761 ttcccaaaga atccccaacc agcagcacat ccacgccggc atcgtccatc agcgcggcaa
    14821 aactggattc gtaagcggtc agcatagcga ttttctcgcc cgccgccttc attttttgca
    14881 gtgtgttcac agtaatcatc agatattgtt accccgccct tttcagacgg ccttttcagt
    14941 ttgaaacggg ctattatagt gaaatgcccg cagccctgcc accgaccgtg ccgcaaatgc
    15001 aaaacagccc gactgtttta cacaatcgga ctgtcaaatc tggtgccggc accaagagtc
    15061 gaactcggga ccccctgatt acaagtcagg tgctctacca actgagctat accggcttac
    15121 tgaaatgttt tgcaacacca tcagcagaaa tggtgccggc accaagagtc gaactcggga
    15181 ccccctgatt acaagtcagg tgctctacca actgagctat accggcaaag aaggcgaatt
    15241 atgcaggcaa cttcacactt tggcaaggaa tttatccgaa agccccggca aatccgaata
    15301 agtaatttat ttgaaaagaa attaatttga agcaggacaa gcatcggcat tctgataaaa
    15361 tatccgcctt tcaaaccgac cgttcacacc gatggcaaga catccctacc gccgcctgcg
    15421 tcctgcaaaa tccggctttc ccgaagtcgg catttccgaa gaaggcaata tccgttcgct
    15481 tcacttgggc agcgacaccg ttcaaagctc aatgaacctc gaccacccgt ccgagctggt
    15541 actctcttac agccgcgcga tgatgggctg gctgctgttt accgacgcac ttccgcagca
    15601 tatcacccaa atcggcttgg gcggcggctc gtttgcacgc tggatagaca cctacctgcc
    15661 cgacacgcgc caaaccgccg tggacatcaa tcctcaggtc atcgccattg cccgcaacct
    15721 gtttgagttg cctttcgagg gcgagaaatt tgaaattatt gaagcagacg gtgcagaata
    15781 tatcaaagtc ttccgccaca acaccgatgt gattttggtg gacgggttcg acggcgaaca
    15841 aatcatcgat gcgctggttg aagaaccgtt tttccgagac tgccgaaacg cactctcttc
    15901 agacggcata ttcgtaacca actggtggag cggcgacaaa cgctaccaac gcttcatcga
    15961 acggttgttg agcgtttttg aagggcgcgt cttggaactt cctgccgaaa gccacggcaa
    16021 tgtcgcggta atggccttcc aaagcagccc caaagagcaa aacatagaca aactcaaaaa
    16081 acgtgccgac aaactgagca acgcatacgg attggacttc caccgtatgc ttgccggcct
    16141 gaaagcgtcc aaccccaaca acggcaagca tttccacctt taagcaacta tcttcacggc
    16201 tgcattggaa catgcggaaa atcaagagga aatcattatg ctgaaacccg aaaccataca
    16261 catatccggt cctgccggca ttttagaaac catccatatc ccgtccgaac aagtaccggc
    16321 acgcggtgtt gccgtcatca atcatcccaa ccccctccag ggcggaacaa acaccaacaa
    16381 agttatccaa actgccgcca aagccttaag caaactcggc ttccactgct acctacccaa
    16441 ccttcgcggc gtaggcggca gcgaaggcac acacgattac ggacgcggcg aaacgcaaga
    16501 ctgcctcgcc gtcatcgact atgcccgtgc ccaacatccc gaagcccccg aatttgcctt
    16561 atccggcttc tccttcggcg gttatgtcgc cacatttgcc gcacaagcgc gcatacccga
    16621 tttattgctg ctcatcggcg cggcagtctg ccactatacc ggccgccccg agccgtccgc
    16681 cgttcccaat gttgccaaaa cgctgatgat acacggcgcg gaagacgaag tcgtcgaaat
    16741 cgggaaagca ctgaaatggg cggaaccgca agatttgccc gtcattacca tcgccggttc
    16801 cacgcatttc tttcacggca aactcatcgt cctgcgcgac accatcctcc gcttcgcgcc
    16861 cgtatgcctg aacggataaa acccctttca gacggcatcg ataatgtaaa acccgtatcg
    16921 gcggcatccg ccgatacggg tttgcgttcc ctctcattat aggcaaaatc cgctgcaaaa
    16981 caccctttcc cgacccgaca aaggatctgc aaacgcaatc ttttttgcca atagcttcaa
    17041 aggtttccga taatcctcgc tgcccgcttc agacggcacg ggatagagcg cgtcattcaa
    17101 cagcggcata cccaaaccca tcatatgcac gcgcaactgg tgtttcttgc ccgtatgcgg
    17161 cgtaaggcgg taaaggctga attcccccct gttttcaatc agttcgaccg tcgtatgtgc
    17221 gtttggttcg ccttccgcct cttgcgtcgt aaaaaatttc tcacccctca ccaaacgcga
    17281 aaccacatcg agcggatacg gcaaatccgt ccttgtcggc gcaagcgcct catacgtttt
    17341 ccataccgtt ttgttttgaa acatcgtctg ataggctccg cgcgtggcag gattatgcga
    17401 cagcagcatc acgcctgccg tatccttgtc caagcggtgc agcggcgtaa tgtcctcaac
    17461 attcaaatgc tgcaattcag gccgcaaacg caggcgcgtg agcagggttt cccgcaaaaa
    17521 cctgccgctg gggatgacgg gcagaaaatg cggcttgtcc accacaatca aatgctcatc
    17581 aatatgcaaa atcttttctt caaacggaat acgcggctca tcctcactgc tggtttcccg
    17641 ataataaaac atcaccttac ccggctcgaa caaagtatgt tcgtccaacg tcgcaccatc
    17701 cgaaccgacc acaaaaccgc tgttcaaccg cctgcgccaa tcgtccgcgc ccacaaaagg
    17761 aaagcggatg cacagaaaat gcagcagcgg cagcccgtaa aactgctttt catgcggcag
    17821 caccaaataa ctgggtttga caccgttcaa cagaggaaga ggattattgc gttttttcat
    17881 gcggcggatt gtaaccgttt ttcacaaact tttcagacgg catatcgaaa cataattgac
    17941 aaaaacaaac atattgtttt ttatgattta aaaatttatt tagacaagat tatcggatat
    18001 tcattattat cagtaaataa gaattaatat caataggaga aatatgaagc gcatcttttt
    18061 gcccgccttg cccgccatcc tgcctttatc cacttatgcc gacctgccct tgacgattga
    18121 agacataatg accgacaagg gcaaatggaa actggaaact tcccttacct acctgaacag
    18181 cgaaaacagc cgcgccgaac ttgccgcacc ggtttacatt caaaccggcg caacctcgtt
    18241 tatccccatt ccgaccgaaa ttcaagaaaa cggcagcaat accgatatgc tcgccggcac
    18301 gctcggtttg cgctacggac tgaccggcaa taccgacatt tacggcagcg gcagctatct
    18361 gtggcacgaa gaacgcaaac tcgacggcaa cggcaaaacc cgcaacaaac ggatgtccga
    18421 catatccgcc ggcatcagcc acaccttcct caaagacgac aaaaaccccg ccctaatcgg
    18481 ctttcttgaa agcacggttt acgaaaaatc gcgcaacaaa gcctcgtcgg gaaaatcgtg
    18541 gctcatcggt gccaccacct acaaagccat cgaccccgtc gtcctctcat tgactgctgc
    18601 ctaccgtatc aacggcagca aaaccctttc aagcaacacc aaatacaaag caggcaatta
    18661 ctggatgctg aatcccaata tatccttcgc cgccaacgac agaatcagcc tcacgggcgg
    18721 catccaatgg ctgggcaagc agcccgaccg tctggacggc aaaaaagaat ccgcaagaaa
    18781 cacatccacc tatgcccatt tcggcgcagg tttcggtttc accaaaacca cggctttaaa
    18841 cgcatccgca cgtttcaacg tttcagggca aagcagttcc gaactgaaat ttggcgtaca
    18901 gcatacattt taagcaggtt ttgattttcc aaccttgtaa tccaaaggag ttattatgaa
    18961 aaaacaaatc acctcagccg taatgatgct gtctatgatt gcccccgcaa tggcaaacgg
    19021 attggacaat caggcatttg aaaaatacgt attccacacg caggcagatg cgccgatgca
    19081 gttggcggag ctttctcaaa aggagatgaa ggagactgag ggggcgtttc ttcctattgt
    19141 ggcaggtgct ttgatgggag gggcaattag tgcttgggct aatcacggca tttctaaaat
    19201 taaaacaggg caatttgctt caacaagaag taccttggct gcaaccgctg gtggtatgat
    19261 aggaggcgga tatagcagtg cgatgttgcg cggtgcaggg attactacta gtgtttttgc
    19321 ccgttctgct tggaaagggg gaaatgctat tcctaatgca gttattcgtg caaatggtgc
    19381 agcattaaat cagtcttcta gcgccgcaat gggaaaacat agaagataaa cgaaatggat
    19441 gatctaatac tatatttttt atcaggtata ttcggaaatc aagttgctga atatattata
    19501 aaaaacaacc gtgagataaa agttcccttt attgtgcttt acgcaatatt ttttacgttg
    19561 atttatactg tggctttgtt gtttctcagt ctgatctatt gggtcaatgg tgcggagatt
    19621 gcatggaagg ggataggtat tttcagtatg tcggtcagtt tttgtatagt cttctgtctt
    19681 tatttgattg acaaggcagg aagatgtaag gataagaaac aatagggatc agatgcggcg
    19741 gcaaacgtag attgggtcta ggctcaacct gcgtttgctg catctttgga agaaatagtg
    19801 gattcgaaaa aataggaaga attctgatta atggtatgcg aggtgtagca atgggggctg
    19861 ttgctggtgg cataaatggt tatgcaggtt ctacgggtaa gaacactgac attcgccgtt
    19921 aaataataaa taaaccaact tccaaccaaa cctgctatcg gtttggttgg aagtgagagg
    19981 aggtaaggta gtgtttgctg ttattttctt ttcgacattg ggctgtattt tagcatggat
    20041 aagagatatt cctaaaataa aatcaaaaaa aattttggca agatccttat atattatagg
    20101 aataataaat gtaataatcg gctatgtatt aattaaaaat atattggttt ctgtttcgga
    20161 tgaagatgga acaaaatatc ttgcaatata tttatcaaat cttttttttg ggacagtatt
    20221 gatgtatgtt cttgtgaaaa gattatctaa aaagccaagc tgaaacccag tacacaactc
    20281 atcaataaaa atcccttttg cacggaacaa tgacaatatt caaattgctg gatttgcaat
    20341 ctgatttacc tattgaaatt gggtgtgcaa catacgttct aagcagggct ttgattttcc
    20401 aaccttgtaa tccaaaggag ttattatgaa aaaacaaatt accgcagcga tgatgattct
    20461 gacaatgatt gcccccgcaa tggcaaacag catggacaat cagatatttg aaaaccaagt
    20521 attccatacg cgggcagatg cgccgatgca gttggcggaa ctttctcaaa aggagatgaa
    20581 ggagactgag agggcgtttc ttccattggc tatcttgggt ggtgctgcca ttggtatgtg
    20641 gacacagcat ggttttagtt atgcaacgac aggcagacca gcttctgtta gagatgttgc
    20701 tattgctggc ggattaggcg caattcctgg tggtgtaggt gccgcaggaa aggttgtttc
    20761 ctttgctaaa tatggacgtg agattaaaat cggcaataat atgcggatag cccctttcgg
    20821 taatagaaca ggtcatccta ttggaaaatt tccccattat catcgtcgag ttacggataa
    20881 tacgggcaag actttgcctg gacagggaat tggtcgtcat cgcccttggg aatcaaaatc
    20941 tacggacaga tcatggaaaa accgcttcta actcctcctt tttttctatt tgaagatgtg
    21001 tctttggata tatttcaagg attgtcggaa ttggaaaaga aaatagagcc gcaggatttg
    21061 atggatgatg tttaccgtgc ttttgattcg gttggaaata ttctgaattt ccgtatagta
    21121 gaaaaagagc aaaaagggtt ttgggtaagt accaaaatca aaacagttgt atttgattcg
    21181 gcagatatgt cttctgatga tctttttctg aaatgcttac agtcttcata taaggcttat
    21241 tttgaaactg aacctgccgg tttagataaa cggcagctga tgaaaacgtt aattcaaaaa
    21301 tgcggattca gttgttgacg aaaaaatgga ttctgaacta acagaaactg atttcgacca
    21361 tgtatgaggt aaaaaatgtc tttcggctat ttgattgcaa catcgcaacc ttgcgaattg
    21421 ttgacaaaat ctcgaggtga aactttttct ttaattatgg ataagatgga tttatggatt
    21481 tatttcagat tttgtgaagg aaatatttat acaataagga agaatgaaac tgaatcttgt
    21541 cttacagaaa gaggaggcaa atggttgaaa catatttatg aatttaatcg gggaagtttt
    21601 attttttctt atgtgcttct aaaaaagaga gaaagcgaag agaattttgc agaaattgtt
    21661 ttaaaatcaa taaaaaataa taaaattttg acagttaagg tacggtcagg cttgcatttt
    21721 gacttaagaa atatttatcg tattgagatg tatag
//
LOCUS       DAXHKG010000016        21705 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.016, whole genome shotgun sequence.
ACCESSION   DAXHKG010000016 DAXHKG010000000
VERSION     DAXHKG010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21705
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.016"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            61..1101
                     /gene="murB"
                     /locus_tag="ACFMWP_000496"
     CDS             61..1101
                     /gene="murB"
                     /locus_tag="ACFMWP_000496"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HFC5891144.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            1113..1763
                     /locus_tag="ACFMWP_000497"
     CDS             1113..1763
                     /locus_tag="ACFMWP_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HFC5891145.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHREKYDRKIGNGNP"
     gene            1818..2594
                     /locus_tag="ACFMWP_000498"
     CDS             1818..2594
                     /locus_tag="ACFMWP_000498"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC5891146.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPAPDFAPDDSMGKIIRTVCDNSLSL"
     gene            2645..3211
                     /locus_tag="ACFMWP_000499"
     CDS             2645..3211
                     /locus_tag="ACFMWP_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HFC5891147.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            3231..4121
                     /locus_tag="ACFMWP_000500"
     CDS             3231..4121
                     /locus_tag="ACFMWP_000500"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HFC5891148.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            4146..4904
                     /locus_tag="ACFMWP_000501"
     CDS             4146..4904
                     /locus_tag="ACFMWP_000501"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC5891149.1"
                     /translation="MNPKISSDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NRWEGDTGRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(4959..5624)
                     /locus_tag="ACFMWP_000502"
     CDS             complement(4959..5624)
                     /locus_tag="ACFMWP_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC5891150.1"
                     /translation="MTVLDREQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(5737..6510)
                     /gene="folE2"
                     /locus_tag="ACFMWP_000503"
     CDS             complement(5737..6510)
                     /gene="folE2"
                     /locus_tag="ACFMWP_000503"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HFC5891151.1"
                     /translation="MNTIADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHAEALDFAQLRRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIQSLLDYDVSLTGEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTADAEVGIEEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            6701..7858
                     /locus_tag="ACFMWP_000504"
     CDS             6701..7858
                     /locus_tag="ACFMWP_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HFC5891152.1"
                     /translation="MKFATQAIHSGYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQVLEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNLDNLDKLLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPMDCWLVLRGIKTLALRMNAHCQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(7921..8922)
                     /gene="hemB"
                     /locus_tag="ACFMWP_000505"
     CDS             complement(7921..8922)
                     /gene="hemB"
                     /locus_tag="ACFMWP_000505"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HFC5891153.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(9105..9389)
                     /gene="yhbY"
                     /locus_tag="ACFMWP_000506"
     CDS             complement(9105..9389)
                     /gene="yhbY"
                     /locus_tag="ACFMWP_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HFC5891154.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            9499..10119
                     /locus_tag="ACFMWP_000507"
     CDS             9499..10119
                     /locus_tag="ACFMWP_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HFC5891155.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFEGLLNNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            10183..12150
                     /gene="ftsH"
                     /locus_tag="ACFMWP_000508"
     CDS             10183..12150
                     /gene="ftsH"
                     /locus_tag="ACFMWP_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HFC5891156.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQIA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            12371..12802
                     /locus_tag="ACFMWP_000509"
     CDS             12371..12802
                     /locus_tag="ACFMWP_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HFC5891157.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSVTLVEAFVKEADRRYA"
     gene            12795..13073
                     /locus_tag="ACFMWP_000510"
     CDS             12795..13073
                     /locus_tag="ACFMWP_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HFC5891158.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            13126..13704
                     /gene="pth"
                     /locus_tag="ACFMWP_000511"
     CDS             13126..13704
                     /gene="pth"
                     /locus_tag="ACFMWP_000511"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HFC5891159.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            13765..13971
                     /locus_tag="ACFMWP_000512"
     CDS             13765..13971
                     /locus_tag="ACFMWP_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HFC5891160.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            13968..14330
                     /locus_tag="ACFMWP_000513"
     CDS             13968..14330
                     /locus_tag="ACFMWP_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HFC5891161.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     LTGALLALFAARSADRPD"
     gene            14561..15976
                     /locus_tag="ACFMWP_000514"
     CDS             14561..15976
                     /locus_tag="ACFMWP_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC5891162.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVALLRLSRGSMKAAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKERKTYVFVLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSSAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            16095..16604
                     /locus_tag="ACFMWP_000515"
     CDS             16095..16604
                     /locus_tag="ACFMWP_000515"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC5891163.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            16767..18149
                     /locus_tag="ACFMWP_000516"
     CDS             16767..18149
                     /locus_tag="ACFMWP_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HFC5891164.1"
                     /translation="MANIAHDIFKAYDIRGIVGKTLTDEAAYLIGKAIATKASEKGIT
                     RIALGRDGRLSGPGLMAQIQHGFTDSSIDVLNVGMIATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIVEKDGFVAADKQGSVTEKDISGEYHNNI
                     VGHIKLKRPMKIVIDAGNGVGGAFAGKLYKGLGNEVAELFCEVDGNFPNHHPDPSKPK
                     NLQDLIAALKNSDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLTPWIKEHGGEPVMEKTGHSFIKSAMKKTGALVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(18169..18924)
                     /locus_tag="ACFMWP_000517"
     CDS             complement(18169..18924)
                     /locus_tag="ACFMWP_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC5891165.1"
                     /translation="MIKIRNIHKTFGESTILRGINLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(18934..19650)
                     /locus_tag="ACFMWP_000518"
     CDS             complement(18934..19650)
                     /locus_tag="ACFMWP_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC5891166.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(19640..20467)
                     /locus_tag="ACFMWP_000519"
     CDS             complement(19640..20467)
                     /locus_tag="ACFMWP_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5891167.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            20752..21660
                     /locus_tag="ACFMWP_000520"
     CDS             20752..21660
                     /locus_tag="ACFMWP_000520"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HFC5891168.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT         5351 a         6388 c         5356 g         4610 t
ORIGIN      
        1 actatagaaa cgatgggctg aagcccgcca ctggcaatac tcattttaaa gttcaaaccc
       61 atgcaaccca tccgataccg aaccgacctt accccctaca acactttcgg cctgcgcgcc
      121 caagcccgag cctttattgc gcttgaacac gccgacgggt tgcgcgacat cgtccggcta
      181 cccgagttca accgagatac tgttttatgg ctgggcggcg gcagcaatat ccttttgatg
      241 gaggactacg ccggtctggt cgtacatatg gaaaacaaag gcatacgcga aattgctcgt
      301 tcagacggca tggttctgat tgaagcgcag gcgggcgaaa tctggcacga ttttgtcctg
      361 cacgccgtcg cgctgggttt gaacggtttg gaaaacctga gcctgattcc gggtacggtc
      421 ggcgcgtcgc ccgtgcagaa catcggcgca tacggcgtag aggcgaaaga tgtgattcac
      481 agcgtgcgct gcttcgattt ggatacggaa acctttgtaa ccctttccaa tgccgactgc
      541 cgcttcgcct accgcgaaag cctgttcaag caggaaggta aagggcgtta tgtgattgtt
      601 tcggtcgtat ttgcattaaa aacgcatttt gtgccgaact tgggttacgg cgatttggcg
      661 gccgccgttg ccgaactgag cgcgggcagg gtgccgacgg cgaaagatgt ttccgatgca
      721 gtgtgtgcaa tccgcaacag taaacttcct aatcctaacg tgcttggcaa tgtcggcagt
      781 ttctttaaaa accccgtcgt cagcgcagaa aaagccgcca ccttgttgca gcggcatcct
      841 gatatgccgc gctatccgca gcccgacggt tcggtcaaac tcgccgccgg ctggctgatc
      901 gaccaatgtc gtctgaaagg ctttcaaatc ggcggcgcgg cggtacatga caggcaggct
      961 ttggtcttag tgaacaaaaa caatgcctcg gcaaacgatg tccggcagtt ggcgcaacac
     1021 atcaaattta cagtatttgc tcggtttcag gtagaattgc acgccgaacc caattggctg
     1081 cctgcttcgt tcagcctgta aatccaagga gtatgcccgt gacccgcccc gccaaaatca
     1141 atacttacac acgcatcatc gacgccagcc ttgcgctttt caacgaggaa ggcgagcgca
     1201 acatcagcac caaccatatt gccgcccact tgggcatcag tccgggcaac ctctattacc
     1261 acttccgcaa caaagacgaa atcatcgtcc aactgttcaa acgttacagc gaagccctgc
     1321 tggaatacct caacgaagcc gtgttgccgt ctgatgtgga agactccatc aattatatgg
     1381 cgggcattta cgacgtgatg tgggaatacc gcttcctatt cagcgacgtg aacaccctgc
     1441 ttgcacgcag tgccgaacta ttgggcgaac acaatacctt cacccaagcc aaagtctccc
     1501 cgctcttggt caacctgctg acccagctca acggtctgaa catcatccaa gccgaccaaa
     1561 ccgccatgaa cgacctcgcc gtcaatatgt ggatgatcac gaaatactgg ttcgacttcg
     1621 acagctccct gcgcggccgc accaagctga ccgaagactc caaagcacgc ggcatccgcc
     1681 gcaccttaag cctccttcgt ccttatcttt tgcccgaaca ccgcgagaaa tacgaccgga
     1741 aaatcggcaa cggcaacccg taaacccaca gcgtccgaat cagccttcag acggcactta
     1801 cccgacggta tcagcgaatg cgcgcagtcc ccccgcccca tatctccatc acaggcctag
     1861 gttacctcgg cctgccgctg gcacaaaagt tttaccaaca cggcagccgc gtcgccgcca
     1921 taaaacgcag cctgacttcg gacgacatca acctgcccat acatctcgac accttcgacc
     1981 tcggcagcac cgatgccttt cagacggcat tgtggcggca ccacgccgac aaacccgtct
     2041 ggttcttcct gctaccgccc tcctcgctga cgcattacgc cgacaccgtc aaacaatggg
     2101 cagaacttgc ccgggcgtgc aacgtgcaac acctgatttt cacaagcagc accagcgttt
     2161 acggcgatac agcgcgcgaa tgcgacgaaa ccgccacacc cgatccgcaa accgagtccg
     2221 cccgccaaat cctcgccgcc gaacaacacc tgctcgacag cggcatctcc aacatcgaca
     2281 tcctgcggct gggcgggctt tattgcgccg aacgccatcc cgtcagccgc cttgttcaaa
     2341 agcaaaacat cccgggcggc aaccgcccca tcaacatcgt ccaccgtaat atcgccgtcg
     2401 aaagcctgtt tcagacggca tttaaccccg gcggcaggcg gctgaaaaac attatcgaac
     2461 cgcgccaccc gacacgacgc gaattctaca cggaagaagc cgccaaactc ggtttgccgg
     2521 ctcctgattt cgcacccgac gacagcatgg gcaaaatcat ccgtaccgtt tgcgataaca
     2581 gcttaagcct gtaaaataag tgtcaacagc aacaaacagg cattctccgc cccgatcaga
     2641 aaatatgtcc gccctcctcc ccatcatcaa ccgcctgatt ctgcaaagcc cggacagccg
     2701 ctcggaactt gccgcctttg caggcaaaac actgaccctg aacattgccg ggctgaaact
     2761 ggcgggacgc atcacggaag acggtttgct ctcggcggga aacggctttg cagacaccga
     2821 aattaccttc cgcaacagcg cggtacagaa aatcctccaa ggcggcgaac ccggggcggg
     2881 cgacatcggg ctcgaaggcg acctcatcct cggcatcgcg gtactgtccc tgctcggcag
     2941 cctgcgttcc cgcgcatcgg acgaattggc acggattttc ggcacgcagg cagacatcgg
     3001 cagccgtgcc gccgacatcg gacacggcat caaacaaatc ggcaggaaca tcgccgaaca
     3061 aatcggcgga ttttcccgcg aatccgagtc cgcaaacatc ggcaacgaag cccttgccga
     3121 ctgcctcgac gaaataagca gactgcgcga cggcgtggaa cgcctcaacg aacgcctcga
     3181 ccggctcgaa cgcgacattt ggatagacta accttcagac ggcatccgac atgaacagcc
     3241 cttttcacaa catcggcatc gtaacccgcc ccaacacgcc cgacatccaa gacaccgcac
     3301 acacgctgat tacctttttg aagcagcacg gctttaccgt ctatctcgac gaagtcggca
     3361 taaaggaagg ctgcatctat acccaagaca ccgtcggctg ccatatcgtc aacaagaccg
     3421 aactggggca atactgcgac ctggtcgccg ttttaggcgg agacggcacc tttctctccg
     3481 tcgcccgcga aatcgccctg cgcgccgttc cgattatcgg catcaaccaa gggcatttgg
     3541 gcttcctgac ccaaattccc cgcgaatata tgacggacaa gctattgccc gttttagaag
     3601 ggaaatacct tgccgaagag cgcatcctga ttgaggccgc actcatccgc gaaggcaaaa
     3661 ccgccgaacg cgccatcgcc ctcaacgatg ccgtcctctc ccgtggcggt gccggacaga
     3721 tgattgagtt tgaagtcttc gtcaatcggg aattcgtcta tacccagcgt tcggacgggc
     3781 tgattgtctc cacccccacc ggatcgaccg cctattcgct tgccgccggc ggccccatca
     3841 tgcaggcagg attacacgcc ttcacgctcg tccccatctg cccgcaatcc atgaccaacc
     3901 gccccatcgc cattccagac acgtccgaaa tcgaaatcct cgttacccaa ggcggcgacg
     3961 cgcgcgtcca tttcgacggt caaacccata tcgacgtgca aaacctcgac cgcatcacca
     4021 tccgccgcta ccgaaatccc ttacgcattt tgcacccgac cgactaccaa tatttcaaaa
     4081 ccctgcgcca aaaactgcac tggggcgagc aattagtcta agccggcctt tacccgaaag
     4141 tatccatgaa tcccaaaatt tcctccgacc atacagaaga tgccgtgcgc ctctccaaac
     4201 gcatggcgca actggggctt tgttcgcgcc gcgaagccga cggctacatc gaacagggct
     4261 gggtaacggt caacggcaaa accgccgtac tcggtcagaa agtttcaccg gccgaccgta
     4321 tcgaactgaa caagaaagcc cacgaacagc aggcggcacg cattaccatc ctgctgaaca
     4381 aacccgtcgg ctatgtcagc gcacaagcgg aaaaaggcta taaatccgcc gccgaactga
     4441 ttacccctga aaaccgctgg gaaggcgaca ccggccgcat ccgtttcgat ccgaaacaca
     4501 aaatcggcct cgcccccgcc ggcaggctcg atatcgattc agtcggatta ctggtattga
     4561 cgcaggacgg ccgtatcgcc aagcagctta tcggcgaaaa cagcggcagt gaaaaagaat
     4621 atttggtgcg cgtgcgcggc aaattggacg aaaaaggact tgccttactg aatcacggat
     4681 tgagtttgga cggcgagaaa ctgcgtcccg cccaagtaga atggcaaaac gaagaccaac
     4741 tgcgcttcgt gttgaaacag ggtaaaaagc ggcaaatccg ccgtatgtgc gaactggtcg
     4801 gactgcgcgt cgtcgggctg aaacgcatcc gcatgggcaa ggtcaaactc ggcaggctgc
     4861 cgcccggcaa atggcgttat cttgctcccg gcgaatcgtt ttaaataagc attaaaaaat
     4921 gccgtctgaa aatccttgcg ttttcagacg gcattgcctt atgcccaaat aacggtttct
     4981 tccaagggcc tgcgcgcctt cgtggcgatt tcctgaacgc ggtaaccgaa tgtcgcggcg
     5041 acggacacgc cccattctgc cgcatcgaac aaaccgaact gcccggacaa tacgcgttcc
     5101 atatcggcat agttgaaacc ttccaccggg caggaatcga tacctgccat cgccgcaccc
     5161 gtcatcatgt tgcccaacgc gatataggtc tggcggcaac accagtcaaa caaggcgcgc
     5221 gaatcgtcca aaatcttgat gtcgtcggct tgaaacgcct gatacctcgc caaagatttt
     5281 gccatggcat ccggttcggt aacgccgcgc cgtttgaggc tttccaacat aaacgggctg
     5341 tcgaagcggg catttttctt tgccaaaaac accaccaaat gactggcggt atccaaagca
     5401 tccgccatac cccaagaaaa cggcttgatt gcctgtcgga tttcagggtt ttgaaccaca
     5461 acaaactgcc aaggctccga accgaccgaa ctgggcgaca aacgcccgag ttctaaaata
     5521 aactgaaaat cctcggcact gattttacgt gccgcatcgt aatgccggca tgatttgcgg
     5581 tttttaaatg cggatagaac ctgctctctg tctaataccg tcatagtgca tcctttatta
     5641 cttttattgc aaattgattt caaaccgata cggcggcaga ttcgccaata acgcccaaac
     5701 gcctttcaga cggcatttgg ttcatcgcaa acacgcctac gggtaggcga tataggcata
     5761 agccgaatgg ttgtggatag attcgaaatt ctcactctcg acgacgaaac tcttgatgcg
     5821 tttgtcggca atcagcgaag tagcgacatc gcgcaccata tcttccacga atttcgggtt
     5881 ttcgtaggcc ttttcggtaa cgtatttttc atcggggcgt ttgagcaggc cgtagagttg
     5941 gcagctcgcc tgcgcctcca cataatcgat gacttcctcg ataccgactt cggcatcggc
     6001 agtcaggctg acggtaacgt gcgaacgctg gttgtgcgcg ccgtattggg aaatttcttt
     6061 ggaacacggg caaagcgagg ttacgggaat catgaccttc atactgtggc cgtatgcacc
     6121 gtctttcatt tcgcccgtga ggctgacatc ataatccagt aaagactgaa taccggaaac
     6181 cggggcggtt ttcttgcgga aaaatgggaa agaaacgctg attttgccgg cgcgggaatc
     6241 caaaagcgcg accatttcag cagtcagcct gcgcaattgt gcaaaatcca aggcttcggc
     6301 atgttgctcc atcaatgcga caaagcgcga catatgcgta cccttctgct cggcgggcag
     6361 gtaaaccgtc atggtcagac gggcaactgt ggactggatg ccttctgcag tttgcagggt
     6421 aatcggaaag cgcaggtctt tgataccgac ctgattgatc ggcagattgc gcaaatctcg
     6481 gctggattgc acgtctgcaa tagtgttcat gagttgtttt tccttaatat tcatgtaatt
     6541 gttgagatgt gtgcatggta tggcgtttcc gccggggaat ataccgtcaa tctgcaaatg
     6601 cgagattata tcacttgctt ttggcggctg cattgattgt ttctattttc gggatagtga
     6661 taaaatcccg acttattcat atcttacaag gcagaaacag atgaaattcg ccacccaagc
     6721 catccattcc ggctacgatt gcgacgaaca caaccgcgcg ctgatgccgc cgatttatca
     6781 aaacagtatg tttgcgctgc acgaaatcgg cgaaaatgtg ccttaccgct attcacgtct
     6841 gagcaacccg acccgtcagg tattggaaga taccgttgcc gatttggaac acggtgcggc
     6901 aggttttgcg ttttccagcg gtatggcagg gattgatgcc gtatggcgca ccttcctgca
     6961 accgggcgat accattgtcg ccgtcgccga tatttacggc ggcgcgtatg atttattggt
     7021 cgatgtttat caaaaatggg gggtgaacgt tgtttttgcc gatttgggca atctggataa
     7081 tttggacaag ctgcttaaag cgcacaaggt caaactggtt tggctggaaa cgccgtccaa
     7141 tccgcttttg cgcttggtag acatcaaagc gcttgccgcg aaagccaaag cggccggcgc
     7201 actggtcggc atcgacaaca cctttgccac gccgtatctg caacagccct tggatatggg
     7261 ttgcgatttt gtgttccatt ccgctaccaa atatttgtgc ggccattccg acgtgttgat
     7321 gggcatcgtc gttgccaaaa ccaaagagct ggcgcagcct ttgcacgata tgatggtgca
     7381 taccggcgcg gttgccggcc cgatggactg ctggctggtg ttgcgcggca tcaaaacact
     7441 ggctctgcgc atgaacgccc attgccaaaa cgcactcgaa atcgcgcgcc gtttggaagc
     7501 ccatcctgcc attgaaaaag tgttccatcc cggcctgccg tctcacgaac attatgaact
     7561 cgcccaagcg caaatgccta aaggcatcgg cggcgtggtg acggtttatc tcaaaaacga
     7621 cacgcgcgaa gcggcaaaca gcgtgattaa aaacatgaaa ctggtcaaaa tggcttccag
     7681 cctcggcggc gtggaaagtt tggtcaacca ttgctattcc cagtcccaca gcggcgtgcc
     7741 gcataatgtg aaaatggaaa tgggcatcaa agtcggcctg ctgcgtttct ccatcggcat
     7801 cgaagacgcg gacgatattt ggaacgatat ttccgccgca ctcgatacaa ctttgtaaac
     7861 cgtaaaaatg ccgtctgaaa ccatagtttc agacagcatt tcaatattgc gaatcaaata
     7921 tcaacgcttc agcatcttgg ccgcctcaat ggcataatag gtcaaaatcc catccgcgcc
     7981 cgcacgtttg aatgccagca ggctttccaa aaccacttta tcgccgtcca gccatccgtt
     8041 ggcaaccgcc gcctgcagca tcgcatattc gcccgaaacc tgataggcat aagtcggcac
     8101 accgaactcg tccttcacgc ggcggacaac gtccaaatac ggcaaaccgg gcttcaccat
     8161 caccatatcc gcaccttcct gaatatcgag cgctacttca tgcagcgcct catcggtgtt
     8221 tgcgggatcc atctgatagg tctttttatc tgccttgccc aaattgcccg aactgcctac
     8281 cgcatcacgg aaagggccat agaatgcaga agcatatttg gcggaatatg ccataatccg
     8341 cgtgtggata tgtccggcat cctccaacgc ctcgcgaatc gcaccgatac gcccgtccat
     8401 catatccgac ggagcaacca cctgcgcgcc cgcttcagcg tggcacaaag cctgcttgac
     8461 caaaacctct acggtttcat cgttcatcac ataaccgttt tcgtccgtca gcccgtcctg
     8521 accgtgaacc gtataaggat cgagcgcgac atccgtcata atgcccagtt cgggaaacct
     8581 ctcgcgcaag gcgcggacag ttgacggcac gagtccttcg ggattgtacg cctcctgcgc
     8641 acgctcggtt ttgtttgccg taaccacggg gaacagtgcc aacatcggaa taccgagctt
     8701 taccgcctct tccgccgtaa acagcagcct gtccaaactt tgacgcttca cacccggcat
     8761 agaaggcaca tcctcctcgc gcgccgaccc ctccaatacg aacaccggat aaatcaaatc
     8821 atcggcggtc agcgtgtgtt cgcgcatcag gcggcgtgaa aaatcgtccc tgcgcatacg
     8881 gcgcatacgc gaagccggaa cattgcggta aggaaactgc ataagccctc caatcatcct
     8941 gtcaacaatt caaaccatac ggaagccgcc gcaacttgca gacagcatcg ggcggcaatc
     9001 aaaatccgtt ttcaccggaa agggtttcgg cccgccgaaa tgccgcgccg aaggacggcg
     9061 tcccgcccat taaagaacaa tagcaaaaca acagcttcag gctgtcagcc ttcgatattc
     9121 ttacgccaca ataccaaaag tttcccgata tgctgaacag gttgcgcgtc aaccgcctca
     9181 cataaggcag tgcagatttc gatacgttcg gcacggtcgt cgccgaatac gcgcacttta
     9241 atcagctcat gcgccgtcaa tgccgcatcg gtttccttga tgaccgcgtc cgtcagaccc
     9301 tgctgaccga ccatcacaac aggatggaga tggtgcgcgc gcgctttcag ttccaaaatt
     9361 tctttggtgt tcaatttggt atccgtcatt ttcctactgc ttgaataaaa agaataatgc
     9421 ggcattgtac gcgatttggc acgacatcgg caaaattaac gtacaatacg cggtttccat
     9481 tccgacccgc gaaccactat ggctgtacgt tccaaatcct caaaagcgtg gctgcacgaa
     9541 cacgtcaacg accactacgt ccatatggcg caaaaagacg gctaccgcgc ccgtgccgca
     9601 tacaaacttt tggaaatcaa cgaaaaagac aaattaatca aacccggcac ggtacttgcc
     9661 gacttgggca gcgcaccggg aagctggtcg caggttgccg ccaagctgac gggtacttcc
     9721 ggagcagttt tcgccttgga catcctgcct atggaagcca tagggggcgt ctccttcatt
     9781 cagggcgact tcagggaaaa cgacgttttg gcgcaatttg aaggcttatt aaacaaccgc
     9841 cccttagacc ttgtaatctg cgatatggcg cccaatatgt cgggaaacgc cgtaagcgat
     9901 caggcgcgca gcttttattt gtgcgaactg gctttggact tcgcctcgca acacctgaaa
     9961 accggcggca gctttttggt caaagtcttt cagggtgcag gctatcagga atacatggca
    10021 gccatgcgcg aaattttcgg cacggtgcag acgcgcaaac ccgaagcctc gcgcaatcgc
    10081 tccagtgaga tttatttatt gggcaaaaat aaacgctgac aatacagacg gcgtgcttta
    10141 caatcatttc cgttttacac ctcaattatg gagccttgct aagtggggaa cacctttaaa
    10201 tcaatccttg tctgggtcgc cttgggtatc ggcctgatgg ctgcgttcaa cgctttagac
    10261 ggtaaaaaag aagacaacgg gcaaatcgaa tattctcagt tcatccaaca ggtcaacaac
    10321 ggcgaagtat ccggcgtcaa catcgaagga tccgtcgtca gcggctacct gattaagggc
    10381 gagcgcaccg acaaaagcac cttcttcacc aacgcgcctt tggacgacaa cctgattaaa
    10441 acactgctcg acaaaaacgt ccgtgtaaaa gtaacgccgg aagaaaaacc gagcgcgctg
    10501 gctgccctgt tttacagcct gctgcccgtc ctgctgctga ttggcgcgtg gttctacttt
    10561 atgcgtatgc agacgggcgg cggcggaaaa ggcggcgcat tctcattcgg caaaagccgc
    10621 gcccgcctac tggacaaaga tgccaacaaa gtgacctttg ccgatgtcgc cggctgcgac
    10681 gaagccaaag aagaagtgca ggaaatcgtc gattacctca aagcgccgaa ccgctatcaa
    10741 agcctgggcg ggcgcgtgcc gcgcggcatc ctgctggcgg gcagcccggg tacgggtaag
    10801 acgcttttgg cgaaagcgat tgcaggcgaa gccggcgtgc cgttcttcag catttcaggt
    10861 tccgactttg tcgaaatgtt cgtcggtgtc ggtgcaagcc gcgtccgcga tatgttcgag
    10921 caggcgaaga aaaacgcccc ctgcatcatc tttatcgacg agattgacgc agtcggccgc
    10981 caacgcggcg caggtttggg cggcggcaat gatgagcgcg agcaaacatt aaaccaattg
    11041 ttggttgaaa tggacggttt tgagagcaat cagactgtaa ttgtgattgc ggcaaccaac
    11101 cgccccgacg tactcgatcc tgcgctgcaa cgccccggcc gtttcgaccg ccaagtcgtc
    11161 gtccccctgc cggacatccg ggggcgcgaa cagattttga acgtccattc taaaaaagtg
    11221 cctttggacg aatctgtgga tttattgtcc ctcgcgcgcg gcacgccggg tttttccggt
    11281 gcggatttgg caaacctggt taacgaagcc gccctgtttg ccggccgccg caacaaagtc
    11341 aaagtcgatc aaagcgattt tgaagacgca aaagacaaaa tctatatggg tccggaacgc
    11401 cgcagtatgg tgatgcacga agacgaaaaa cgtgcgacgg cgtatcatga gtccggacac
    11461 gcgattgttg ccgaaagcct gccctttacc gaccccgtcc acaaagtaac cattatgccg
    11521 cgcggacgtg cgctgggtct gacttggcag cttccggagc gcgaccgcat cagtatgtat
    11581 aaagatcaga tgttgagcca gctctccatc ctgttcggcg gacggattgc cgaagacatc
    11641 ttcgtcggac gcatctccac cggcgcatca aacgactttg aacgcgcaac ccaaatggcg
    11701 cgcgaaatgg taacgcgcta cggcatgagc gacaaaatgg gcgtgatggt ttatgcggaa
    11761 aacgaaggcg aagtcttctt aggacgcagc gtaacccgtt cgcaaaacat ttccgagaaa
    11821 acccagcagg acatcgatgc ggaaatccgc cggattttgg acgagcagta tcagattgcc
    11881 tacaaaatcc tcgatgaaaa ccgcgacaag atggaaacca tgtgcaaagc cctgatggaa
    11941 tgggaaacca tcgaccgcga tcaggtactg gaaatcatgg cgggcaaaca acccagtccg
    12001 cccaaggatt acagccacaa cctgcgcgag aatgcggacg cggcggaaga taacgcgccg
    12061 cacgctccga ctcgggaaga aaccgaagca cctgccccgg cagacaccgc ttcgacagag
    12121 tccgagcagc agcctgaaaa caaggcttaa cttcccgaac aaacggcagc ccgcaagctg
    12181 ccgttttccc atcctgtttt cagacggcat tttccgctca atgccgtctg aaacgccaaa
    12241 gccgtatcgg tttttgcgga tctgcgatat ggcggtttaa attgaaatca gacgaggcaa
    12301 ggctgtaccg gtttaaaatt aaaccgctat aataccgccc ttcgaataca cgcccgcatt
    12361 ggtgatgcct gtgaaaaaag ttgaaaaaaa catcttggtg ctgcacggcg cggacaaaat
    12421 gttcgagctg gtcgataagg ttgaagacta tccgcacttt ctgccgtggt acagcaagac
    12481 cgaggtcatc gggcgtagcg gcaacgaact gaaggcgcgg ctgtttatgg actatatgca
    12541 cgttcgccaa tcattcgcca cgcacaaccg caacattccg ggcagggaaa tccgtatgga
    12601 actgctcgag ggtccgttca aaaccttacg tggaacgtgg aaatttatcg atttgggcga
    12661 cgatatgtgc aaaatcgaat tcaatttgga atacgatttt tccaatgccg ttttgtccgc
    12721 cttaatttcc cccgtcttca accacctttc cgtcacgctg gtcgaagcgt tcgtcaaaga
    12781 ggcagaccgc cgttatgctt gaaattgaga ttgtgtacgg gctgcccgac cgacaggttt
    12841 tgaaaaccat gcagcttgcc gaaggaacaa ccgtccgcgc cgccgcactg caaagcggtt
    12901 tggacggcat atttgaagat ttaaacctgc attccgcgcc tttgggcatt ttcggcaaag
    12961 ccgtcaaaga cgacacgccg ctgcgcgacg gcgaccgcat cgaagtgtac cgcccgctgt
    13021 tgatcgaccc caaagaagcg cgccgcaaac gcgttcaaaa tcaagaagaa taaccatgcc
    13081 gtctgaagcc ttcagacagc attcgacaga aacacggaaa atatcatgtc aaacacaatc
    13141 aaaatggttg tcggcttggg caacccgggc aaagaatacg aacagacacg ccacaatgcg
    13201 ggtttttggt tcctcgacga actggcgtgg aaatggaagg cttcatttaa agaagaaaaa
    13261 aaattcttcg gcgaagtcgc ccgtgccgcc ctgcccgacg gcgacgtttg gctgctcaaa
    13321 cctgccacgt tcatgaaccg ttccggacag gcagttgccg cccttgcgca gttttataaa
    13381 atcaaacccg aagaaatcct cgtcgtccac gacgaactcg acattccctg cggacggatc
    13441 aaattcaaac tcggcggcgg caacggcgga cacaacggct tgaaagacat tcaggcaaaa
    13501 ctcggcacgg cagactatta ccgtctgcgc ctcggcatcg gccacccggg cgaccgcaac
    13561 ctcgtcgtcg gctatgtcct gaacaaaccc agtacggaac accgccgaca gattgacgat
    13621 gccgtcgcca aatccctgca ggccataccc gacatccttg ccggcaaatg ggaagaggca
    13681 acccgcttcc tgcacagcaa atgacccgat gccgtctgaa gccctttcag acggcatgtt
    13741 cccgatttcc atatccgaac agtcatgacc gaactcaagc agcttatcca aaccgaatcc
    13801 atccccgtca tcgaagaaac cctcgatttc ctgctgtacg aatgcagcat cgacgacgca
    13861 ccatccgccg aagaagtggc acaatggcgc gacatacttg ccgcacgcgg cggcaaattc
    13921 ctgcgcctgt ccaaaatctg ccaaacgtgg ctggacgagg aggcggcatg aagctgccgc
    13981 gcaaccgctt cagcctgctt tccgcattgt ggtttgccgg cggcatctat tcgctgctct
    14041 tcaaagctgc cgacaccgcg ccgccgccgt ttccgcattt cgacaaagca gcacaccttg
    14101 ccctgttttt cgcacaaatc tggcttttga ccaaagcatt caaaaccgga aaacttccca
    14161 tcccctaccg cagcctgatg gtctttgccc tctgtttcgc cctcttcagc gaatgcgcgc
    14221 aggcatggtt taccgcaacg agaaccggca gtttgggcga tgtccttgcc gacctgacgg
    14281 gtgcattgct cgcactcttt gccgcacgtt ccgccgaccg cccggactga atcggtttat
    14341 tttccccaaa caggatgcac ctcttcccga tacatcctat ttttcccctt acatatcaat
    14401 ctcatctcat aaacaaaacc gacaaatcgt ttacaatata tttacactac atcagattac
    14461 aaatatactc gaaccagttg cagaagcggc gattccacaa accgtttcgg attgcacgac
    14521 acaaaagaaa aaccgatttt gttgccttaa aggagtattc atgaacctgc atgcaaagga
    14581 caaaacccag catcccgaaa acgtcgagct gctcagtgcg cagaagccga ttaccgactt
    14641 taagggcctg ctgaccacca ttatttccgc cgtcgtctgt ttcggcattt accacatcct
    14701 gccttacagc cccgatgcca ataaaggtat cgcgttgctg attttcgttg ccgcactttg
    14761 gtttaccgaa gccgtccaca ttaccgtaac cgcactgatg gtgccgattc tcgccgtcgt
    14821 actcggtttc cccgacatgg acatcaaaaa ggcgatggct gatttttcca acccgattat
    14881 ctacattttt ttcggcggct tcgcgcttgc caccgccctg catatgcagc ggctggaccg
    14941 taaaatcgcc gtcgccctgc tgcggctgtc gcgcggcagt atgaaggccg ccgtgctgat
    15001 gttgttcctc gttaccgcct ttctgtccat gtggatcagc aacaccgcca ccgccgcgat
    15061 gatgctgcct ctggcaatgg gtatgctgag ccacctcgac cgggaaaaag aacgcaaaac
    15121 ctacgtcttc gtcctgctcg gcatcgccta ttgcgccagc atcggcggct tgggcacgct
    15181 cgtcggctcg ccgcccaacc tgattgccgc caaagcccta aatctggact tcgtcggctg
    15241 gatgaagctc ggcctgccga tgatgctgtt gattctgccc ttgatgctgc tctccctgta
    15301 cgtcatcctc aaacctaatt tgaacgaacg cgtggaaatc aaagccgaat ccatcccttg
    15361 gacgctgcac cgcgtgatcg cgctgttgat tttccttgcc acagccgccg cgtggatatt
    15421 cagctccaaa atcaaaaccg ccttcggcat ttccaatccc gacaccgtta tcgccctgag
    15481 tgccgccgtc gccgtcgtcg tcttcggcgt ggcgcaatgg aaggaagtcg cccgcaatac
    15541 cgactggggc gtgttgatgc tcttcggcgg cggcatcagc ctgagcacgc tgttgaaaac
    15601 atccggcgcg tccgaagcct tgggacagca ggttgccgcc accttttcca gcgcgcccgc
    15661 atttttggtg atactcatcg tcgccgcctt cattattttt ctgaccgagt tcaccagcaa
    15721 caccgcctcc gccgcattgc ttgtaccgat tttctccggc atcgctatgc agatggggct
    15781 gcccgaacaa gtcttggtat tcgtcatcgg catcggcgca tcttgtgcct tcatgctgcc
    15841 ggttgccaca ccgcctaacg cgattgtgtt cggcacgggc ttaatcaagc aacgcgaaat
    15901 gatgaatgtc ggcatactgc tgaacatcct ctgcgtagta ttggttgctc tgtgggctta
    15961 tgctgtactg atgtaaacca tcgacctaaa caacaagacc gtctgaaaga atatttttca
    16021 gacggccttg aagtttgtcg ttcagacaca atttgtcgaa tcattcaaaa ccggattcta
    16081 acgaaaggaa acccatgatt atcctgcaca ccaacaaagg cgacatcaaa atcgaactcg
    16141 atttcgacaa agcccccgtt accgccaaaa acttcgagca atacgtcaaa gacggcttct
    16201 acgacggcgt aatcttccac cgcgtcatca aaggcttcat gattcaaggc ggcggcatgg
    16261 atgaaaacat gaacgaaaaa gaaacccgcg atccgattca aaacgaagcg tccaacggcc
    16321 tgcccaacga taaatacacc atcgccatgg cacgcacttc cgacccccat tccgccagcg
    16381 cgcaattctt catcaacact gccgacaacg ctttcctgaa cttccgttct aaagagctgt
    16441 acggcaaaac cgtcgtccaa gactggggct atgccgtatt cggtaaagtc gttgacggtt
    16501 ttgacgttgt cgatgccatc gaaggcgtat ccaccaaacg ccacggctac catgacgacg
    16561 taccgagcga acctgtcgtc atcattaaag ccgaagcggt ataaaccggc aatccgaaag
    16621 cagcctgcac aaaggctgct ttttttgttt caggcggcat aaaatccaag cacatatgcc
    16681 gtctgaacac ctcccgcaag ccttcggaca atgttgcaac gtgttaaaat agcctccttt
    16741 cctgaaaccg aaacgaggga acccctatgg caaatatcgc ccacgacatt ttcaaagcct
    16801 acgacatccg aggcatcgtc ggtaaaaccc tgaccgacga agctgcctat ttaatcggca
    16861 aagccattgc caccaaagcc tccgaaaaag gcattacccg catcgccctc ggccgcgacg
    16921 gccgtttgag cggccccggc ctgatggcac aaattcaaca cggttttaca gacagcagca
    16981 tcgacgtcct caacgtcggc atgattgcca ctcctatgct ctacttcgca gccatcaacg
    17041 aatgcggcgg cagcggcgtg atgattaccg gcagccacaa tccgcccgat tacaacggtt
    17101 tcaaaatgat gctcggcggc gacacgctcg caggcgaagc cattcaagaa cttttagcta
    17161 ttgttgagaa agacggtttt gttgccgccg acaaacaagg cagcgtaacc gaaaaagaca
    17221 tctccggcga ataccacaac aacatcgtcg gccacattaa gctcaaacgt ccgatgaaaa
    17281 tcgtgattga cgcgggcaac ggtgtcggcg gcgcgtttgc cggcaaactc tacaaaggtt
    17341 tgggcaatga agtggccgaa cttttctgcg aagtggacgg caattttcct aatcaccacc
    17401 ctgatccttc caaacccaaa aacctgcaag atttgattgc cgcgctgaaa aacagcgatg
    17461 ccgaaatcgg cttggctttt gacggcgatg ccgaccgctt gggcgtggtc accaaagacg
    17521 gcaacattat ttatcccgac cgccaattaa tgctgttcgc ccaagacgtg ttgagccgca
    17581 atcctaaagc aaaagtgatt ttcgatgtca aatccacccg cctgctgacc ccgtggatta
    17641 aagaacacgg cggcgaacct gtgatggaaa aaaccggcca cagctttatc aaatccgcca
    17701 tgaaaaaaac cggcgcgctg gttgccggcg aaatgagcgg acacatcttc ttcaaagaac
    17761 gctggttcgg cttcgacgac ggtctgtacg ccggcgcacg cctcttggaa atcctgtctg
    17821 cctccgataa tccgtccgaa gtgttaaaca acctgccgca aagcatttcc acgcccgaac
    17881 tcaacatcgc cctgcccgaa ggcagcaacg gccatcaggt tatcgacgaa ctcgccgcca
    17941 aagccgaatt tgaaggcgca accgaaatca tcaccatcga cggtctgcgc gttgaatttc
    18001 ccgacggctt cggtctgatg cgtgcttcca ataccacgcc gattctggtg ttgcgttttg
    18061 aggcggatac gcaagaagcc atcgagcgga ttcaaaacca attcaaagcc gtcatcgaaa
    18121 gcaatccgaa tctaatctgg cctctgtaaa cacaggaaaa atgcttaatc aaatcttggt
    18181 agattggatt tggcttaaaa atctccgcgt ccgttcgtgt ttggggtggt cgaacaactc
    18241 tttcgggctg ccctgctcta cgataacgcc gccgtccatc acgacaacgg tcgtggcaac
    18301 ttccagcgcg aacttgattt cgtgggtaac gacgaccatc gtccaacctt cccgcgccaa
    18361 ttccttcatg gcgttcaaca cgtcttgcac caattcaggg tcgagtgcgg aagtgggttc
    18421 gtcaaacaac atcagctcgg gctgaatcgc caatgcgcgg gcaatgccga cgcgctgctg
    18481 ctgaccgccg gaaagctggt agggatacaa atccactttg tcgcccaagc cgactttttc
    18541 cagcagtttc agagcctctt cgcgcgcttg ggcggcaggc ttgccctgta cggcaaccgg
    18601 tccttccatt acgttttcca aggcggtttt gtgcggaaag aggttgtatt gttgaaacac
    18661 catgcctgat ttgcggcgta gtgccaaaat atcgtgtttg cttggttttt tagaaaaatc
    18721 gattttcagc ggtcgctcgt tgtcgaactc gatttgtccg tcttcgggca tttccaacgc
    18781 gtttaggcat cgcagaaacg tcgttttgcc tgagccggaa ggcccgagga taacgaccac
    18841 ctgccctttg cccacatcca aattgatgcc gcgcaaaata gtgctttcgc cgaaggtctt
    18901 atggatattg cggattttaa tcataacaac tccttatttg gcgacataac ggtcgaaacg
    18961 tttttccaaa cgtgcctgaa tcaggaacag aaccttgcaa aaacaccagt aaaccaaagc
    19021 ggcttcgata tagacgggca aaaagtcata agtgcggttt gccgtttcct gcgcgacgcg
    19081 gaataattcc gttaccgtca cgactgccgc gagcgaggtg tttttaaaca aaccgataaa
    19141 ctcgttgctc aaaggcggca cggcaacgcg aaatgcctgc ggcgcgacga tgcggcggaa
    19201 cgtctgcata taggtcatac cgatggagaa acctgcttcc cattggcctt taggtacgga
    19261 caaaattgcc gcgcgtatgg tttcggaagc gtatgcaccg acattgagcg agaagccgat
    19321 aatggcggcg ggaatcggat cgatatagat accgacggaa ggcagcccgt aaaacacaat
    19381 cacaagctga accaacagcg gcgtaccgcg aatgacggaa atataaaatt ccaccaattt
    19441 cagcaggatt ttccgcacga tgccgccggc gggcataatc cgcaccaaag ccacggctac
    19501 cgcaatcatc ataccgataa cgaaagaagc tgccgccaaa ggcagagaga ccgcgaagcc
    19561 ggctttgacc ataggcaaaa acgcgctgac aatcatatcg gcgcgtgttt ccgtcataaa
    19621 cggcagcgaa gcaaggaaat tattgaacac tgatgtcttt tccgaagaat tgttcgccca
    19681 gttttttcag cgtaccgtcg gctttcagct cgttgattgc cgtactgaat ttcgccacgg
    19741 cttcgtcatt gcccttgttg acaatcaggc cggaaccgac tttttcatcg gcaggtgcgg
    19801 accaaacgat tttcacgccc gcattcgggt ttttcttcag atagtccaaa accgccaatt
    19861 cgtcgttcag ggttgcatcg gcacgttttt gttcaatcag ggtcagcgat tgcgccaaac
    19921 cgtccactgc caccaaatct gcgcctgcag ctttggcttt ttcgccgtag ttgctggtca
    19981 gggattgtgc ggttttcacg cctttgatgt cgtcgataga tttgatgttg ctgtcgttac
    20041 gggcaaccaa tacggcaccg ctccagctgt aaggatcgga tttgtcgaat gtcgcttggc
    20101 gttcggggct ggtcagaccg acttggtttg ccaccacgtc gaaacgcccc gccttcaaac
    20161 ccgccatcat cgaatcccat tgcgtttctt taaactcgac tttcacgccc agtttttccg
    20221 ccacggcgcg ggttacttcc acatcgtaac cggtcagttt gccgtccttg tcgtggtagg
    20281 taaacggtgc gtaagtgcct tccgtgccga cggtaaccgt gcctttattg ttgatgcgct
    20341 cgattaaaga accggaaact gccgattgtg caggcgcgga agatgctccg ctgccgcttt
    20401 ccgaaccgcc gcaggccgcc aaaaccaatg cggcaatgcc gccgagtacg aattttttca
    20461 acatcattct ctcctgtaaa aagtgtgcaa gtgcggcatt ctaagtgaaa ttgcggcaaa
    20521 cacaaagaat acttttttta tatggttatt ccaaatcgga atggaaaaga tatgccgaaa
    20581 ccgccggaag cggaaataaa gggggcggga aaggcgacgg gcggcacgaa accgaaaagc
    20641 ggcatcaggt atgcaaacgg cggattcacg cacgccgttc cggcaaaaat ccgcctgccg
    20701 attcggtgct ataatccatc cgaaacagat gacaccaaaa aggaacatct catgaacacg
    20761 ccccaatccg ccatcattcc cgaccacgcc caagccggca tctttatcga agccgacttc
    20821 gccgccaacc gcctcaacga tattaaagcc gcctgccgcg cttcgctcga cgcgttaact
    20881 gccttgaaag cccgctttcc ggacgatatt ttgggtctga ccatcgcctt cggcagcaaa
    20941 gcctgggcaa cattcggaca tacggacgaa ggcagtgaaa tcaaaccctt ctccgaaatg
    21001 ggcaacgggc ttgcgccgtc cacgcagcac gatatgtcca tccacatcca atccttccgc
    21061 caaaacgccg cctacgcgct tgcccaatcc gttttaggcg cgttcggcga cagcatatgc
    21121 gtcgcgtccg aagaacacgg tttgcgcctg tatcaggatc gcggactgga cggtttcgtc
    21181 gacggcacgg aaaacccgca gggcgatgaa aatgtccgcg aagtcgccat catccccgaa
    21241 ggaaaacccg atgcgggcgg cagctatgtc ctgctgcaaa aatacctgca cgatttgaaa
    21301 aaatgggatg ccgtccccgt cgccgaacag gaggcctcgg tcggacgcgg caaggaaacc
    21361 gacgacgaat tcggccgcga tgtccgcctg cccgattcgc acctcggccg cgtcaacctg
    21421 aaagaaaacg gagtcggcct gaaaatcgtc cgccgcagcc tgcccttcgg caaaatcagc
    21481 ggcgaacacg gtttgatgtt taccgcatac tgccgcacgc tgcacaatat cgaagcgcaa
    21541 ttattgagta tgttcggcga tacggacggc aaaaccgacc tgctgctccg acacctctcc
    21601 gccgccgttt cgggcggata ctactacgcg ccgtctgtcg aacgcctgca aaacctctaa
    21661 gccggacgat gccgtctgaa accatttttc agacggcatt ttccc
//
LOCUS       DAXHKG010000017        21080 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.017, whole genome shotgun sequence.
ACCESSION   DAXHKG010000017 DAXHKG010000000
VERSION     DAXHKG010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21080
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.017"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            305..1741
                     /locus_tag="ACFMWP_000521"
     CDS             305..1741
                     /locus_tag="ACFMWP_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HFC5891169.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSAQNLLLLAAGMGWLYHI
                     GPVFAAIIVLYSSCVYLLGELLRSDRENTRRFWLGCGIAASLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFSWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFNGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPISIILLLIIVLAPSGIPGFIYANF"
     gene            1752..2738
                     /gene="patB"
                     /locus_tag="ACFMWP_000522"
     CDS             1752..2738
                     /gene="patB"
                     /locus_tag="ACFMWP_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HFC5891170.1"
                     /translation="MKHFLSLFASILMSALIAAWFAQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTLSDGIKAFLSGETPPTAQDGGSADMPPEAAASEAAPQTGEI
                     QEWKQDTDTAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYP
                     SFFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDR
                     ILEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLKGKIILIPTAHTLSGGKD
                     RYTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2735..3928
                     /locus_tag="ACFMWP_000523"
     CDS             2735..3928
                     /locus_tag="ACFMWP_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HFC5891171.1"
                     /translation="MNSKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNTGDFPLGGILAHTGSGGSMTLTASDG
                     IASKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLTIHTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILAYGTNEAFGDNID
                     IADTEQKWLDTVRQIHDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRIA
                     RQGQTMFWSWQNAMGGVCSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            4177..5730
                     /locus_tag="ACFMWP_000524"
     CDS             4177..5730
                     /locus_tag="ACFMWP_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HFC5891172.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5820..7847)
                     /locus_tag="ACFMWP_000525"
     CDS             complement(5820..7847)
                     /locus_tag="ACFMWP_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HFC5891173.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQAQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLENLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGNLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8136..10142
                     /locus_tag="ACFMWP_000526"
     CDS             8136..10142
                     /locus_tag="ACFMWP_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HFC5891174.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGVIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            complement(10265..11356)
                     /gene="mltB"
                     /locus_tag="ACFMWP_000527"
     CDS             complement(10265..11356)
                     /gene="mltB"
                     /locus_tag="ACFMWP_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HFC5891175.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAVIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(11505..12932)
                     /locus_tag="ACFMWP_000528"
     CDS             complement(11505..12932)
                     /locus_tag="ACFMWP_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC5891176.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKRHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            13117..17244
                     /gene="mfd"
                     /locus_tag="ACFMWP_000529"
     CDS             13117..17244
                     /gene="mfd"
                     /locus_tag="ACFMWP_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HFC5891177.1"
                     /translation="MTYPIPKPREKSRWPNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHALPDLAVNRQSDEPLQALKDFQTAFEGRILLCAESLGRRETMLGFLQQNGL
                     KAKSVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDSLKAAAVSTESSLPLGTSNLHGQIRQQPAPSP
                     VGEGWGEGKAVAAQTEFPASATNPLPSPLPQEREQSAAAVSDDLKTKSSLHPVANNLH
                     GQIRQQPTPSPVGEGWGEGKAVAAQTEFSAAATKPLPSPLPQEREQSAAVVSDSLKAA
                     AVSTESSLPPGKSNLHGQIQQQPAPSPVGEGWGEGKAVAAQSAIAVITESDLYQYVAR
                     SRVHNRRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLITMDLGGETNEMMLL
                     EYAGEAQLYVPVSQLHLISRYSGQAHENVALHKLGSGAWNKAKRKAAEKARDTAAELL
                     NLYAQRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVC
                     GDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSR
                     FNNSKATKAALEGLADGTVDIVIGTHKLVQDNIRFKSLGLVIIDEEHRFGVRQKEQLK
                     RLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREA
                     VLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQ
                     QRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTP
                     EYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTE
                     MLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCET
                     VQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDAIDAAGEAVTVTFGKNN
                     NVDPTEIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            17393..17776
                     /gene="panD"
                     /locus_tag="ACFMWP_000530"
     CDS             17393..17776
                     /gene="panD"
                     /locus_tag="ACFMWP_000530"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HFC5891178.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVVCLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            17798..18640
                     /gene="kdsA"
                     /locus_tag="ACFMWP_000531"
     CDS             17798..18640
                     /gene="kdsA"
                     /locus_tag="ACFMWP_000531"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HFC5891179.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            18655..19095
                     /locus_tag="ACFMWP_000532"
     CDS             18655..19095
                     /locus_tag="ACFMWP_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HFC5891180.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     SVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSIVFMATALLSAVLSWQLSGKEAV"
     gene            19142..20428
                     /gene="eno"
                     /locus_tag="ACFMWP_000533"
     CDS             19142..20428
                     /gene="eno"
                     /locus_tag="ACFMWP_000533"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HFC5891181.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            20442..20720
                     /gene="ftsB"
                     /locus_tag="ACFMWP_000534"
     CDS             20442..20720
                     /gene="ftsB"
                     /locus_tag="ACFMWP_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HFC5891182.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(20761..21051)
                     /gene="yfaE"
                     /locus_tag="ACFMWP_000535"
     CDS             complement(20761..21051)
                     /gene="yfaE"
                     /locus_tag="ACFMWP_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HFC5891183.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYRKPPLAFLGRDEILPCCCYVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         5031 a         6398 c         5254 g         4397 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat acaacgtcgg tatcggcagc ggcgcactgt
       61 tgggacattg ggtaacgcaa tactcgggca tttcctgcat cggcattgcc ggtatgctgg
      121 tatcggcggc aggtttgtgg gtctgcctga atttgaaccg ccatattcga acctgaccgc
      181 gcgatgccgt ctgaagcccc tcccgccctt cagacggcat tttgattgaa gaaatatccg
      241 cccctgctta aaataacagg ctttgccgtg ttttaacgcc tattttttgt tccaaggatg
      301 gtttatgccg ttgctgtctg tcgagttcgc actgttcttt ctcgctttcc tgccgattta
      361 ctggggcttg gcgaaatacc cgtccgccca aaacctgctg cttctggctg ccggtatggg
      421 ctggctctac catatcggcc ccgtatttgc ggcaatcatc gtcctttatt cctcctgcgt
      481 gtaccttttg ggcgaactgc tccgttccga tcgcgaaaat acgcgccgct tttggctggg
      541 gtgcggcatt gccgcctcgc tgaccgtctt gggctttttc aaatatttcg actttttccg
      601 gccgctgatt gcccaatatg ccggaaaagg cggcgcaatc gacatcctga tgccgctggg
      661 gctttcgtat tacaccttcc agtcgctcgc ctatcttgtt tactgcttcc gcgccccgca
      721 cgccgcgcgt ttcagctggc acgagctgct gctgcacctg agttttttcc ccaccgttac
      781 ctccggcccg attatccgcg ccgccgcatt caaaagcgca gacggcgagc aggcaggcgc
      841 attggcgcaa atccgtaccc gccaaccgcg ctcacccgtc cgccccgcac tcgccgtttc
      901 cctgattctg ctgggtattg ccaaaaaatg gtggctggcg gggatgctcg cagaaaactg
      961 ggtgtcgccc gtgtttgaaa accccgccca attcaacggc tggggcgtgt tggcgggcgt
     1021 gtacggctat accttccaac tcttcctgga cttttccgga tattccgatt tggttatcgg
     1081 catggcgatg ctgctgggct tccgactgcc caaaaacttc tccgcaccgc ttcgtgccgc
     1141 gaatatccgt gcattttggg acaaatggca catcagcctt tccacctgga tacgcgacta
     1201 catctacatc cccttgggcg gcagcaaaaa aggctttttg cggacacagc tcaacctgat
     1261 ggcggcaatg gtactctcag gcatctggca cggctacggc tggaacttcc tcatttgggg
     1321 cgcgctgcac ggcacggcgc tggtgctgct caacacgggc gatcgctatt tcggacgcaa
     1381 cgcgctatgc cgtctgaaat accttgcgcc gctctcgtgg tttgttacct tccatttcgt
     1441 ctgccttagc tttgttgtct tcaataccgc aagccccgac gatgcaggcg cagttttcaa
     1501 tgccctcttt gccaatgcca acggctggaa tgcgccgcaa caggcaaaca tgctgctgct
     1561 tgcctcgttt gcatccgtga tgctgctcta cccttacctg caacgcgctt tcgacggcgc
     1621 ggtcaaaggt ttggaaaaaa tcccgatgtg gctgtggttt atcccgattt ccatcatcct
     1681 gctgctgatt atcgtccttg ccccctcggg gatacccggt tttatttatg ccaattttta
     1741 agggtttgga catgaaacac tttctttccc ttttcgcttc catattgatg tctgccctga
     1801 ttgccgcgtg gtttgcccaa aacccgatca atgcctactg gcagcagacc taccaccgca
     1861 acagcccgct cgaaccgctt gccgcctacg gatggtggcg gagcggtgcg gcgttgcaag
     1921 aaaacgccta caccctttca gacggcatca aagccttcct gtccggcgaa acgccgccga
     1981 cggctcaaga cggcggttcg gcagatatgc cgcctgaagc cgccgcatcc gaagccgccc
     2041 ctcaaaccgg cgaaatccaa gaatggaaac aggacaccga caccgccgcc gtccgcagcg
     2101 gcgacaaagt ctttttcgcc ggcgactcgc tgatgcaggg cgttgcaccc ttcgtgcaaa
     2161 aaagcctgaa acagcaatac ggcatcgaat ccgtcaacct cagcaaacaa agcacggggc
     2221 tgtcctaccc ctcattcttc gactggccga aaacgattga agaaaccctg aaaaaacatc
     2281 ccgaaatcag cgtgctcgcc gtcttcctcg gcccgaacga cccgtgggat ttccccgtcg
     2341 gcaaacgcta cctcaaattc gcttccgacg aatgggcgca agaatacctg aaacgcgtcg
     2401 accgcatcct tgaagccgca cacacgcacc gcgtccaagt cgtctggctc ggcatcccct
     2461 acatgaaaaa agccaagctc gacgggcaga tgcgctacct cgacaaactg ctttcggaac
     2521 atttgaaagg caaaatcatc ctgattccca ccgcgcacac cctgagcggc gggaaagacc
     2581 gctacacgga ctccgtcaac gtcaacggca aacccgtccg ctaccgcagc aaggacggca
     2641 tacactttac cgccgaagga caaaaactgc tggcggcaaa aataatggaa aaaatcgttt
     2701 ttgaaccaag tacgcaacca tcaagtacac agccatgaat tccaaacacc tcatcgcatt
     2761 ttccgccctg ttcgccgcca cgcaggcaga agccctgccc gtcgcctccg tcagcctcga
     2821 caccgttacc gtttccccgt ccgcccccta caccgataca aacgggctct tgaccgacta
     2881 cggcaatgcc gccgcctcgc cttggatgaa aaaactccaa tccgtcgcac aaggcagcgg
     2941 cgagaccttc cgtatcctgc aaatcggcga ctcgcatacc gccggcgact tctttaccga
     3001 cagcctgcgc aaacgcctgc aaaaaacttg gggcgacggc ggcataggct gggtttaccc
     3061 cgccaacgtc aaagggcagc gcatggcggc cgtccggcac aacggtaact ggcaaagcct
     3121 caccagcagg aacaacaccg gagacttccc gctcggcggc atcctcgccc acaccggcag
     3181 cggcggcagc atgaccctga ccgcatcgga cggcatagca agcaagcagc gcgtttccct
     3241 gtttgccaaa cccctgcttg ccgaacaaac cctgaccgtc aacggcaaca ccgtctccgc
     3301 caacggcggc ggctggcagg tactggatac gggcgcggca ctgcccctga ccatacacac
     3361 cgaaatgccg tgggacatcg gcttcatcaa catcgaaaat cccgccggcg gcattaccgt
     3421 ttccgcgatg ggcatcaacg gcgcacaatt aacccagtgg tcgaaatggc gtgccgaccg
     3481 tatgaacgac cttgcccaaa ccggcgccga tctagtcatc cttgcctacg gtaccaacga
     3541 agccttcggc gacaacatcg acattgccga cactgaacaa aaatggctgg ataccgtccg
     3601 ccaaatccac gacagcctgc ctgccgccgg catcctcatc atcggcgcgc ccgaatccct
     3661 gaaaaacacg ctcggcgtat gcggcacacg ccccgtccgc ctgaccgaag tccaacagat
     3721 gcagcggcgc atcgcccgtc aggggcagac gatgttctgg tcttggcaaa acgcgatggg
     3781 cggcgtttgc agcatgaaaa actggctcaa ccaaggatgg gccgccaaag acggtgtaca
     3841 cttctccgcc aaaggctacc ggcgcgcggc ggaaatgctc gccgacagcc tcgaagaact
     3901 cgtccgcgcc gccgcaatca ggcaataatc ggacaggagg cggacggtat ttccgcaaca
     3961 gggggatgcc gtctgaaacg cataccttca tattgcttca gacggcattc gcctcagaca
     4021 ttggaaagac gcaggcgaac ctccggcata cggcgcaaag gcggcgtttg atatgccgtc
     4081 tgaaggcaaa gatgataaac tgccgccttc cgttttcata cggcatattg ttttcaaatg
     4141 agggcgttcg ccgtccgcaa ccataaagga agtttcatga accggactta tgccaatttc
     4201 tacgaaatgc tcgccgccgc ctgccgcaaa aacggcaacg gcacggcagt gttcgacggc
     4261 aaggaaaaaa ccgcctaccg cgcgctcaag caggaggccg aagccgtcgc ggcgtatctg
     4321 caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg cggtttccaa ttccacagaa
     4381 tttattaccg cctatttcgc cgtctccgcc atcggcgcgg tcgccgtacc gatgaacaca
     4441 tttttgaaaa acagcgaata cgcgtatatc ctgaacgact gcaaggcgcg cttcctgttc
     4501 gcctcggcgg gcctgtcaaa agagttggcg ggcttgaagg cgcaaacgcc cgtcgaaaaa
     4561 atcatttgga cggacaaaag ccgtccggcc ggcgaaatgg cggaaggcga tgcctttttt
     4621 gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc gccaaccccg gataaatgat
     4681 ttggcacaca tcatctacac ctccggcacg acggggcatc ccaaaggcgc gctaatcagt
     4741 tacgccaacc tgttcgccaa cctgaacggc atcgaacgca tctttaaaat ctccaagcgc
     4801 gaccgcttta tcgttttcct gccgatgttc cacagcttca cgctgacggc tatggtgctg
     4861 ctgccgattt atatggcgtg ttcgattatt ttggtcaaat ccgttttccc gttttccaac
     4921 gttttgaaac aggccctgct caaacgcgcg accgtgtttt tgggcatacc cgcgatttac
     4981 accgcaatga gcaaggcgaa aatcccttgg tatttcagat ggttcaaccg cattcgcctg
     5041 tttatcagcg gcggtgcgcc tttggcggaa caaaccatcc tcgatttcaa agccaagttc
     5101 ccccgcgcca aattgctgga aggctacgga ctgagcgaag cctctcccgt cgtcgccgtc
     5161 aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc ccctgcccgg tttggaagcc
     5221 aaagccgtcg atgaagaatt ggtcgaagtg ccgcgcggcg aagtgggcga actgatcgtc
     5281 aggggcggtt cggtgatgcg gggctacctc aatatgcctg ccgccaccga tgaaaccatc
     5341 gtcaacggct ggttgaaaac gggcgatttc gttaccatag acgaagacgg ctttatcttt
     5401 atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc aaaacgtcta tccgcgcgaa
     5461 atcgaagaag aaatctacaa actcgatgcc gtcgaagccg ctgccgtcat cggcgtgaaa
     5521 gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat tgaaggaagg tatggatttg
     5581 ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg caaatttcaa aatccccaaa
     5641 caaatccact ttaaagacgg gctgccgcgc aacgctacgg gcaaggtatt gaaacgggtg
     5701 ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc gtccgaagcc ccgtccggca
     5761 aaaaaaatgc ggtgaatctg cttcaccgca ttttttggca aacgccggag cgaggatatt
     5821 tactctgcca attccacctg ctcgtgcgcc atcagttcct gaccgacatc atccaacaac
     5881 atcaaataac gttcgtagtt tttcaaaatg tcggcaatca gctcgtcctt gttcatatac
     5941 tgcacatcgt acccgacgcg cccgtcgaaa aaataagcgt agggtttgta agttgtctga
     6001 tgccggatat gcggcaggtt gccgtcgtta atcaactggt cggatacatc ctgcccgaca
     6061 gacttaatcc cgtacataaa atcgcgcatc gtctctttcc gaatgacgaa ctcgattgcg
     6121 ggctcgtcct gatgaaacat cttatcgacc cggacgctca agccgtattc ttccgaaagc
     6181 tcccgttgca actcgtgcat agcgggcgat gcggtatgtt tgaggaattt taaaatatcc
     6241 tgctcctgcg tctggctcat tatctgcacc agccgttctt tccacttgcc gcccgtccaa
     6301 aatacactgg tagggttaac ccgggtctca aaatatttct tatccgcact caatcctttc
     6361 cacaggctga aacacattat cagcatcagc agggcaaacg gcagggaaac aatcagggtc
     6421 atagactgca ggttgcctag cccgcccgag cgcatcagca aaacggcaac ggcagacatc
     6481 agcacgcccc acataaccgc ctgccaccgt ggtgcgctca agcccttgtc ccgagaggta
     6541 atattgttca ggacataaat cccggaatcg gcagaagtta caaaaaacag ggaaatgacc
     6601 agcaggctga cgatgctcgt caattcgggc agggggaggt aattaaagaa tttaaaaagc
     6661 agcgtttccg gagaggaggt catcttttcg agcattcccc ccgcaacccc gtcattcagc
     6721 caaatcgccg tattgccgaa gacggtaaac cacaaaacgc cgaacaggcc ggggatgagc
     6781 aaaaccccga agacaaactc gcggatggtg cgcccctttg aaatgcgcgc gataaacaaa
     6841 cccacaaacg gcgcccaaga acaccaccac gcccaataaa gcaccgtcca agattcaaac
     6901 cacggcttgt gttcccgttc gtacgcataa gttttaaaac tgaggcgcac cagattttcg
     6961 aggtagttcc ctatgttgtc gccgaatgcc gacaacaggt aaacagtggg gcccgccgcc
     7021 aaaacaaaaa acagcagcaa aaacgcaagg ctcaggttca actcgctcaa caccttcacg
     7081 cccttcccca cgccggatat tgccgaaacg acggcgaggg acatgacggc ggcgataatc
     7141 aaaacctgca cgctgaagct gttttcggca atccagccca tttcctgcaa tccggcgccc
     7201 agttgcgaag ccccgaaccc caatgtggtg atgatgccga aaaaagtagc aagcaacgcc
     7261 ataatatcaa tggcatcgcc gaaccttccg gaaatttttt ctttcaacag ggggtaaaaa
     7321 caagaacgca gggcaagcgg cagcttgtag cggaaaccga aataagccaa agccaatgca
     7381 atcgtaccgt acaccgacca agcgtgaacg ccccaatgga acaccgtgtg cagcaatgcc
     7441 tgctgctgcc tgtgttccgg cgtgccggcc gtaatgtccg aaaaataatg catcaacggc
     7501 tctgccacgc cgaaaaacat cagacccacg cccatcccgg ccgcaaacag catcgccagc
     7561 cacgacagga agccgaattc cggcacatct tcatcccgtc cgagcctgat gtttcccaaa
     7621 ctgctgaccg agagtatcag caggaaaccc agaaaaatgg aaaacgttaa aacataaaac
     7681 cagctgaact cggtaaaaat gacttctttt gcccgatcga gccacatctg cgcctgatcc
     7741 ggcacggtta aaaccaatac caccaaaaca cacacaaaaa acaaagtcgt caaaataacc
     7801 atcggattaa atgacgttcg gcgttctata aattcagaca gggacaaacc ttctcactcc
     7861 tttgttaaaa acagacaaac ccggtcatcg ggcaaagcgg tcaaaacctg ccggtaaaat
     7921 accggcttcc ggatgacgaa atgcacaaac cggccgaaat tgttataatc gaaaaaatta
     7981 aaaatcaata cggattattc tatcagattg atttatcgat atttattata tcattaatat
     8041 agtttgattt caaaccggcg gaaaatgcgc cgcccaccgc aggcgcgccc tccccgctat
     8101 cggggcgttt aacgccggat tgccgatgcg gtacaatggc tgatatgaag aaaattaccc
     8161 ctcaaaacct gcgccccctg ctttcggaaa gcttgggaca taccgatttt gtcaacgtcc
     8221 tcaacgcact gattaaattt ttgcgccgtg gcggcaaaaa atgtgcgggg gaacgtttcg
     8281 acctgattat cgacacattc aaacaagaca gggaattgct gtcccgcttc agccggtgtt
     8341 tttacatctg gctcgcgcaa atacacattt atccggcact catcaaactc ggcatcttct
     8401 cgcgccacag ctttgcccgg gaaatgggca tacgcatcta cgaacgcttc agcccgtcat
     8461 ataaagattt tgccaacttg ggcgaagtct tcctttatct tttccattcc gaaaacgacg
     8521 acaaatggct gcaaacgctc aatatccgcc aatggctggt tttatacgaa ctcatccgga
     8581 gccacgccga accgtccaaa ttgcagacgg cgggcatccg ccttgccgat gcgcgtttgc
     8641 gcgccatcga aatgctgtct gtctggacgg catccgaagc catcgaaccc gacctcatcc
     8701 gcatcgcccc gcgcctgctg gaagccgatt cttccttcgt cgccctccaa cgcgaaaccg
     8761 ccaaactggt cgaacactac cgcaacggca ccgcgcctta cgacaccgcc cacctcgaag
     8821 tgatgttcga ccaatgtttc agccagattg actatttgcg ccgcaaaggg acgggcgccg
     8881 gctccggttc gtcggtcaaa gtcgcccacc tgctcgaacg gctccggcag accgtagacc
     8941 gtctgaagct gctcaccgac atccaaaccg gcgccggcaa cagcaaccgc ctgaccatcg
     9001 cgctgatgaa ctccctcatc tacgcggcgg tcgaacaata cagcacccgc cacctgcgcc
     9061 gcagcagcat ccgtatgctc gcccgcagca ttaccgaaaa caaaagccac cacggcgaac
     9121 actacatcac ccgcaaccgc aaagaatatt tcaaaatgtt ctactcggcg gcaggcggcg
     9181 gcgtcatcat cgccctgatg gcgctgctca aaatccgcat cggcacactc ggcctcagcc
     9241 ccttcctcac ttccttgtcg gccgggttca actacggcat cggctttatg atcatccata
     9301 tgctgcactg caccgtcgcc accaagcagc ccgcgatgac tgccgccagc tttgccgaac
     9361 aggtcgatct caacgaaggc ggcaaagcgg tggacaacaa actcgccaag ctcctcatcg
     9421 acgtatgccg ctcccaaagc gtcgccgtct tcggcaacgt ttccatcgcc atccttttgg
     9481 cgtgcgccat atcgttcggc tatgcccatc tgtaccggca gcccatactc gatgcccaca
     9541 ccgccgccta ccagttcaaa tccatagaca tcatcgctta cccgacgctg tggtatgccg
     9601 ccattgcagg tctgtggctg ttctgctccg gcatcatcgc aggttttttc gacaaccgcg
     9661 ccgactacct caacctgcgc caacgcctgc ctttcaaccc cttgctgcgt aaaatcatgc
     9721 gccccgggcc ccgccgcgtc ctcgccgcct acatccacaa acactacggc tcgttggtag
     9781 gcaacttcat cttcgggatg ctcttgggta tgaccggcta tttcggacac ctcctcgggc
     9841 tgccgctgga catccgccac gtcgcctttt cctccgccaa cctcggctat gccgccgtca
     9901 gcggcaacgt cggtttgggc acgttcgtac tcggcatttt cagcgtcctc gccatcggcc
     9961 tggtcaacct ctgcgtcagt ttcagcctcg ccctcttcgt cgccctgcgc tcgcgcggca
    10021 cgaaaatcgg cagcatccgc aatctgatta aaagtttttg gaatcagatt aaaagcaatc
    10081 cctgcatact tttcctcccg cccgccaaag aacagggaca tcctccttcg gacaagcctt
    10141 gaccggcaat gccgtctgaa gcgggattcg ccccgaatac cgccctgatg cgggaaatcc
    10201 ccataaaagg atgcaaaaat gccgtctgaa tcgaaacgtg gttcagacgg cattttaaaa
    10261 aacattacaa tcccgggccg ccaagcgaat tggcaatgtc cctgaccgcc gttacataca
    10321 tccgactgtg attgtactgc cataccgtat aaaaattgtt caagcccaaa taatattcaa
    10381 acacgccggg tgcggtttcc agtttgaaca aaaccgcctt ttcatcatcg gcaagctctt
    10441 cgccggggat gatgccgtac gccttcaaat ccgccaccgt ccgcgtcagg gcggtttttt
    10501 cgccaatgat tgcctgaaca tccgcacccg gcgccaatgt tgcagacacc agtattttcc
    10561 cgcccgtgcg ccaaccgtgc tgcttcatat aattggcaac cgatgccgcg acatcgccga
    10621 tgttgcccca tatgtcccga tgtccgtccc cgtcataatc caccgcccat ttccggtagc
    10681 tcgaaggcat aaattgcggc atccccattg cgcccgcata gctgccttta aaggcgaaaa
    10741 catcgccgcc ttcttctttt gccagcttta aaagctcgac caattctttt tggaaaaacc
    10801 cggcgcggcg ggggtaatca aagcctaagg tcgccaatgc gtccgccaca cggaaactgc
    10861 ccgtattttt gccgtaattc gtttcaatcc cgataaccgc cacgataagt tcggcaggca
    10921 cgccgtattt ttgcgccaca tcatcgataa gcgcgcggtt ttccgcataa aaccggcgcg
    10981 cgccgcgaaa tttcgccttg cccgaatttc ccgtgcggaa cacataccac ggacgcgatg
    11041 tggagggtcg gtgcataatc ttgacgatgt ccgccttgta agccgctttg tcaaaaaaat
    11101 cctgccattc cgcccgggaa aaatcccctt tcccgacttc atcgtccaca aaacggcgga
    11161 catttgcatt ggcggcaaac ccgctgtcgg ataccggtac ggctgccgcg tcaaacgcgg
    11221 ggcggctttc ttttttcatt tcatccgcgc ggggggcttg ggcttcattt acccggggcg
    11281 ggcgtgcctc catcgccgta caggcagaca aagccgccaa acaaattgcc agcggcagta
    11341 tttttctctt tttcataaat atgttccgaa caaatagggt aagtgggaaa gcggcgcaag
    11401 gggcgcggtg cgaaatgcgg catccgccgc aatcggcggc tttgtggaat accgcgcgtt
    11461 gccttttgca ccgcctgaaa tccgtatgcc gccgtatttg cccgctatcc gcaatatcgg
    11521 cagtccaata tatctttgcg gatgtcgttc agcaggaagg ctgcggtgtc ttcgtgttcc
    11581 gcctgtacga agacaaagag tcgggcgatg attttgccga tgaagacttt ttgcagggcg
    11641 caggcgtcgg tcagggtgtg ttcctgcagg aagctgcgga tgtcttcggg caaagtgtag
    11701 tcgcgggcga cggcggcaaa gcgggcatcg gtttgcaggc ggtcgagcag ggtttggttt
    11761 ttgtccaact tcatgcctgc ttctttttct tcggcggtgg cgcggacgaa ctggtcgtaa
    11821 atttcggcat aaagcatatc gttcgggcct tcaaaaatcg tgaagggacg gatgtcgata
    11881 gcgatattgc cggcggtgtg tccgcgttca aaacccttcg cgcccaaaag tttttgcaac
    11941 atttgcgcgg cggcgtaagt gtattccgtg gcgagggttt tgacgatgtt cgcctccatc
    12001 agctgatggg cgacgggtgc aacgggcgaa acggaatggc agacgtagcg gtaaagaatc
    12061 tcggaaacct gatggcggcg ccggatttcg cggcgttcgt aatcgacgaa tctgatgtcg
    12121 ttgcggacgt atcgttccag gttttcaagg atgtattcca taatgccgtg cgtcatgccg
    12181 atcagttgca ggcggctgcg gataaagatg ttttggaacg cgcgcaaacc tgcggcgtcg
    12241 ctctgggaga gtttcatcac ggcggttgca ggcatttcgg catcgatgcg gttgacggcg
    12301 taacggacgg cgcgcaagcc ttcggatgcg agggtttcgc agcggatgta tgttttgggg
    12361 acgagcagca ggtcgatgac tttggcgagt ttgccgtttt tgcgttcttt ggcggcaacg
    12421 aggaggaagt cgctttgcga gttgccctgc cagtattttg cggcgttgac gtaaatggtt
    12481 tgtccgtcgg tatattcgta gtaagactgc atttctcggg caatcgccgc gccggaggtt
    12541 tcgggttcgg taacgcccaa accgccgccc tcgcctttga aaaccatgtc caaaccctgt
    12601 gcgatttgcg cttcatcgcc gaactcttgc agtggctgca acaccagcgc gccttcgatg
    12661 ccggtacgca gcgtaacggg tacgccgtaa tgccccgcaa tccgcaatac ttcctgaatt
    12721 tcaaactggc tgcccttgcg gccgccgtgt cttttgtcga ggaagggcaa cagcaaaccc
    12781 gcctgcttca aggcaagcca tttgtcttcg ggcaggtatc gcatcaggtc gataccgtct
    12841 gaaaaaatgc ggcggaatgc ggattcgatg tgctttaaaa aagcagccgt gtccatagtt
    12901 gacggctgcg cgctcggttc ggtgtgtatc atcggcttcc tctgtcggtt cccattaatc
    12961 ggcggccggt caaaccgcct gccacagttt agagttgatt ttctaaactt taccacaaag
    13021 tgcgccgggc aacaatccgc cggcttttca gacggcatcg cgcaccctcc cgtgctaaaa
    13081 tgaccgtttg catcactgtc cgccgattgc cgcactatga cctaccccat ccccaaaccc
    13141 cgtgaaaaat cccgttggcc caatctttcg caaggctcgc tgcccttggc tttggcgcgt
    13201 tatctgccgc acaagcggct caaggtcgtg ctgacccaag atgcggaaca ggcgttgcgc
    13261 cttcagacgg catggcggtt tttccgtccg cacgacacgg cggtgttctt gccggactgg
    13321 gaaacgctgc cttacgagcg tttttctccg catcaggatt tggtgtcgga gcggctctcg
    13381 gcgttgtggc agattaagag cggcgcggcg gacgtgttgt ttgtgccggt tgccacggcg
    13441 atgcagaagc tgccgcccgt gccgtttttg gcggggcgca cgttttggct gaaaacagga
    13501 cagactttgg atataggccg tctgaaaacc gatttggtag atgcgggcta caaccatgtt
    13561 tcccatgttg ttgcggcggg cgagtttgcc gtgcgcggcg gcattgtcga tttgttcccc
    13621 atgggcagcg aaatgcccta ccgcatcgat ttgtttgacg atgaaatcga cagcatcaaa
    13681 acctttgata cggacacgca gcgcaccatc tcccccgttt ccgaaatccg cctgctgccg
    13741 gcgcacgaat tccccaccga cagcgaggcg caaaaaatct tccgcagccg cttccgcgag
    13801 gaagtcgatg gtaatccgaa cgatgcggct gtatacaaag cagtaagcaa cggccacttc
    13861 ggtgcgggcg tggaatatta cctgccgctg ttttttgaaa acgagctgga aacgctgttt
    13921 gactatatcg gcgaagacgc gctgtttgtc tctttgggcg atgttcacgc cgaggcaaac
    13981 cgcttttgga gcgacgtcaa atcgcgttac gccatggcgc agggcgacga aacctatccg
    14041 cctttgcttc cacagcattt gtatctctct gccgatgttt ttgcaggccg tctgaaaaac
    14101 tacggacagg tgctgcccga tgtttccggc aaggaacacg ccctccccga ccttgccgtc
    14161 aaccgacaat ccgacgagcc tttgcaggca ttgaaggatt ttcagacggc gtttgaagga
    14221 cggattttgc tgtgcgccga aagtttggga cggcgcgaaa ccatgctcgg cttcttgcag
    14281 caaaacggtt taaaagccaa aagcgtgtct gattggcaag gcttcttgtc ggcacatgag
    14341 ccgctgatga ttacagtggc accgttggct tacggattca aactgggcgg attgcaatcc
    14401 ccgaaccagc agcaaactac ttccgcctcc gaaggagaag gcgatgcggt taccgaccaa
    14461 accgaatttt ccgcatccgc aacaaaccct ctccctagcc ctctcccaca ggagagggaa
    14521 caaagtgcag ccgccgtttc agacagtctg aaagcagccg ccgtttcaac cgaaagcagc
    14581 ctgcccctcg gtacaagtaa tctgcacggg caaatccgac agcaacctgc cccttccccc
    14641 gtgggggagg gttggggaga gggcaaagca gttgccgctc aaaccgaatt tcccgcatcc
    14701 gcaacaaacc ctctccctag ccctctccca caggagaggg aacaaagtgc agccgccgtt
    14761 tcagacgacc tgaaaaccaa aagcagcctg catcccgtcg caaataatct gcacgggcaa
    14821 atccgacagc aacctactcc ctcccccgtg ggggagggtt ggggagaggg caaagcagtt
    14881 gccgctcaaa ccgaattttc cgcagccgca acaaaacctc tccctagccc tctcccacag
    14941 gagagggaac aaagtgcagc cgtcgtttca gacagtctga aagcagccgc cgtttcaacc
    15001 gaaagcagcc tgccccccgg taaaagtaat ctgcacgggc aaatccaaca gcaacctgcc
    15061 ccctcccccg tgggggaggg ttggggagag ggcaaagcag ttgccgctca aagtgccatc
    15121 gccgtcatca ccgaatccga tctctaccaa tacgtcgccc gttcgcgcgt ccacaaccgc
    15181 cgcaagaaac acgccgccgt ttcagacggt ctgttgcgcg accttgccga aatcaacatc
    15241 ggcgaccccg tcgttcacga agaacacggc atcgggcggt atatgggctt gatcacaatg
    15301 gatttgggcg gcgaaaccaa cgaaatgatg ttgcttgaat atgcaggcga agcgcagctt
    15361 tatgtgcctg tttcgcaact gcatttaatc agccgctact ccggtcaggc gcatgaaaac
    15421 gtcgccctgc acaagctcgg cagcggcgcg tggaacaaag cgaaacgcaa agccgccgaa
    15481 aaagcgcgcg ataccgccgc cgagttgctc aacctctacg cccaacgcgc tgcccaatcg
    15541 ggacacaagt ttgaaatcaa cgagttggac tatcaggcgt ttgccgacgg tttcggctac
    15601 gaggaaaccg aagaccaggc cgccgccatc gccgccgtga ttaaagacct gacacaggcg
    15661 aagccgatgg accgactcgt gtgcggcgat gtcggctttg gcaaaaccga agtcgccctg
    15721 cgcgccgcgt ttgtggcggt gatgggcggc aaacaggtcg ccgtactcgc cccaaccacg
    15781 cttctagtcg agcagcacgc gcaaaacttt gccgaccgtt tcgccgattt ccccgtgaaa
    15841 gtcgccagcc tttcgcgttt caacaacagc aaagccacca aagccgcact ggaaggcttg
    15901 gcggacggca cggtcgacat cgttatcggc acgcacaaat tggtgcagga caacatcaga
    15961 ttcaaaagct taggtttagt gattatcgat gaagaacacc gcttcggcgt gcgccagaaa
    16021 gaacagctca aacgcctgcg cgccaatgtc gatatcctta ccatgaccgc cacgccgatt
    16081 ccgcgcaccc tcagcatggc actcgaaggc ctgcgcgact tctcgctgat taccaccgcg
    16141 cccagccgcc gcctcgccgt gaaaaccttt gtcaaaccgt tcagcgaagg cagcgtgcgc
    16201 gaagccgtgt tgcgcgaact caaacgcgga ggacaggtat ttttcctgca caatgaagta
    16261 gatacgattg aaaatatgcg cgagcggctg gaaaccctgc tgcccgaagc ccgcatcggc
    16321 gtggcgcacg gacaactgcg cgagcgcgag ctggaacaag tcatgcgcga ctttttacag
    16381 caacgattca acgtgttgct ctgttccacc atcatcgaaa ccggtatcga cattcccaac
    16441 gccaacacca tcatcatcaa ccgcgccgac aaattcggac tggcgcaact gcaccagctt
    16501 cgcgggcgcg tcggacgcag ccaccaccaa gcctacgcct acctgctcac gcccgaatac
    16561 atcaccaaag acgcagaaaa acgcctcgac gccatcgcgg cagcagacga actcggcgca
    16621 ggtttcaccc tcgccatgca ggatttggaa atccgcggcg caggcgaaat cctcggcgaa
    16681 gggcagtccg gcgaaatgat acaggtcggc ttcacgctct acaccgaaat gctcaaacaa
    16741 gccgtgcgcg atctcaaaaa aggccgccaa cccgacctcg acgcgccgct gggcatcacc
    16801 accgaaatca aactgcacag ccccgcccta ctgcccgaaa gctactgccc cgacatccac
    16861 gagcgtctcg tcctctacaa acgcctcgcc gtctgcgaaa ccgtgcagca aatcaacgcc
    16921 atacacgaag aactcgtcga ccgcttcggc ctgcccgaac aacccgtcaa aacccttatc
    16981 gaaagccacc acctgcggct tatggcaaaa gaattgggta tcgatgccat tgatgcggcc
    17041 ggcgaagcgg taacggtaac cttcggtaaa aacaataatg tcgatccaac cgaaatcatc
    17101 ctgctgattc agaacgacaa aaaataccgc cttgccggcg ccgataagct gcggtttacc
    17161 gcagagatgg aaaatatcga ggtcagaatc aacaccgtaa aaaacgtttt aaaaaccttg
    17221 caaaacagat gcctgcccaa ataaagccga caccgcaatg ccgtctgaaa caccgttttc
    17281 cttgtccgaa agccgccatt atgaatttga aggaaactcc actataatac ggcattcaga
    17341 tctccagacg gcatcgcgcc cgtcagaccg cacacaaacc aaaaggaaat acatgttccg
    17401 tactatgctt ggcggaaaaa tccaccgcgc caccgttacc gaagccgatt tgaactacgt
    17461 cggcagtatt accgtcgatc aagacctgtt agacgcagca ggcatctacc ccaacgaaaa
    17521 agtcgccatc gtcaacaaca acaacggcga acgttttgaa acctatacca tttcaggcaa
    17581 acgcggcagc ggcgtggtct gcctgaacgg ggcggcggcc aggctggtac agaaaggcga
    17641 tatcgtcatc atcatgtctt acgtccaact ctccgaaccc gaaatcgccg cacacgaacc
    17701 caaagtcgtc ttggtagacg gaaacaacaa aatccgcgac atcatctcct acgagccgcc
    17761 gcacaccgtg ctgtaaccct gaaaacggac attgaccatg gatattaaaa tcaacggcat
    17821 taccgtcggt aacgatgctc ctttcgtact gttcggcggc atcaacgttt tagaagattt
    17881 ggattccacc ctccaaacct gtgcgcatta cgtcgaagtt acccgaaaac tcggtattcc
    17941 ctatatcttt aaagcctctt tcgacaaggc aaaccgttcc tccatccatt cttatcgcgg
    18001 cgtaggcttg gaagaaggct taaagatttt tgaaaaagtc aaagcagagt tcggcatccc
    18061 cgtcattacc gacgtacacg aaccccatca gtgccaaccc gtcgccgaag tgtgcgatgt
    18121 catccagctt cccgcctttc ttgcgcggca gaccgatttg gtggccgcaa tggcggaaac
    18181 gggcaatgtc atcaacatca aaaaacccca gttcctcagc ccttcgcaaa tgaaaaacat
    18241 cgtggaaaaa ttccgcgaag ccggcaacgg gaaactgatt ttatgcgaac gcggcagcag
    18301 cttcggctac gacaacctcg ttgtcgatat gctcggtttc ggcgtgatga aacaaacctg
    18361 cggcaacctg ccggttattt tcgacgttac ccattccctg caaacccgcg atgccggttc
    18421 tgccgcatcc ggcggtcgtc gcgcacaggc tttggatttg gcacttgcag gcatggcaac
    18481 ccgccttgcc ggcctgttcc tcgaatcgca ccccgatccg aaactggcaa aatgcgacgg
    18541 ccccagcgcg ctgccgctgc accttttaga agatttttta atccgcatca aagcattgga
    18601 cgatttaatc aaatcacaac cgattttaac aatcgagtaa cacggtttcg ccttatgatg
    18661 cagactttcc gaaaaatcag cctgtatgcc gcaaccttgt ggctcggtat gcagattatg
    18721 gcgggttata tcgtcgcgcc ggtgctgttc aaaatgctgc ccaaaatgca ggcgggcgaa
    18781 attgccagcg tattgttcga catcctctct tggagcgggc ttgccgtttg gggcgcggta
    18841 ctggctgccg cctttgccgc cctaacccgg cggcaaaccg ccctgctgct ttttttattg
    18901 tccgcccttg ccgccaaccg attcttgatt acacccgtta tcgaggcgct gaaatacggg
    18961 catgagaatt ggctgttgtc gtttgtaggc ggatccttcg gaatgtggca cggcatttcc
    19021 agtattgttt ttatggcaac cgccctactt tcagcagttt taagttggca gctttccggc
    19081 aaagaggccg tctgaagccc tcccattttt tacctccctt cacttcactt ggagaacatt
    19141 catgagcgca atcgttgata ttttcgcccg cgaaattttg gactcacgcg gcaaccccac
    19201 agtcgagtgt gatgtattgc tcgaatctgg cgtaatggga cgtgcagccg taccgagcgg
    19261 tgcgtccacc ggtcaaaaag aggctttgga actgcgcgac ggcgacaaat cccgttattc
    19321 gggcaagggc gtattgaagg cggtcgaaca cgtcaacaac caaatcgccc aagccctcat
    19381 tggtatcgat gccagcgaac aatcttatat cgaccaaatc atgatcgaat tggacggtac
    19441 tgaaaacaaa ggtaacttgg gtgccaacgc gactttggcc gtttctatgg ccgtagcacg
    19501 cgcagccgct gaagatgcag ggctgccgct ttaccgctac ttgggcggcg caggtccgat
    19561 gtccctgccc gtaccgatga tgaacgtcat caacggcggc gaacacgcca acaacagcct
    19621 gaacatccaa gagtttatga ttatgcccgt cggcgcaaaa tctttccgcg aagcgttgcg
    19681 ctgcggtgcg gaaattttcc acgccttgaa aaaactgtgc gacagcaaag gcttcccgac
    19741 cacagtcggc gacgaaggcg gtttcgcccc caacctgaac agccacaaag aagccctgca
    19801 actgatggtc gaggcgaccg aagccgccgg ctacaaagcg ggcgaagacg tattattcgc
    19861 attggactgc gcctccagcg agttctacaa agacggcaaa taccacttgg aagccgaagg
    19921 ccgctcctac accaacgcgg aatttgccga atatctggaa agtctggtca acgagttccc
    19981 catcatctcc atcgaagacg gcatggatga aaacgactgg gaaggctgga aactgctgac
    20041 cgaaaaactg ggcggcaaag tccaactcgt tggcgacgac ctcttcgtta ccaacccgaa
    20101 aatccttgcc gaaggcattg aaaaaggcgt ggcaaacgca ctattggtca aagtcaacca
    20161 aatcggtact ttgagtgaaa ccctgaaagc cgtcgactta gccaaacgca accgctacgc
    20221 cagcgtaatg agccaccgct ccggcgaaac cgaagacagc accattgccg acttggcagt
    20281 cgccaccaac tgtatgcaga tcaaaaccgg ttctttgagc cgttccgacc gcatggcgaa
    20341 atacaaccaa ctgctgcgta tcgaggaaga attggcggaa gccgccgact accccggcaa
    20401 agccgcattc taccaactgg gcaaataaaa aaggttaagg tatgaagtgg gtaactgtcg
    20461 ttttatcctt cgcacttgtc tgttgccaat acagcctctg gttcggcaaa ggcagcatcg
    20521 gacgcaacag cagtctgaga gaacagattg ccgttcaaga agaaaaaaac cagacactcg
    20581 ccctacgcaa tcattccctt gccgccgaag tctatgattt ggaaaacggt caagaagcca
    20641 tttcggaaat cgcccgggta gaactgggtt atatccaaga cggtgaaacc ttttaccgac
    20701 tcatcaggca taaccggtaa taccgtcaaa aagccgtccg aaccaatgtt cggacggctt
    20761 ttatttcaac aaactgtcag acagcccctc atcctccccc gacaaaccgc aatccagcct
    20821 gacatccccc tcgacgtaac agcagcacgg cagtatctcg tcccgcccca aaaaagccaa
    20881 aggcggcttc cgataagtaa cgcttccctc caaaatcttc acccggcacg atccgcaata
    20941 tccgcttcgg cactgatatt ccaccatatg ccccgtccgt tccaagcctt ccaacagggt
    21001 ctcgccctcc aagagctcaa aaaaaccctt attcgtacca atgcgcgcca tttccgacca
    21061 atcaaaaata tagtggatta
//
LOCUS       DAXHKG010000018        20896 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.018, whole genome shotgun sequence.
ACCESSION   DAXHKG010000018 DAXHKG010000000
VERSION     DAXHKG010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20896
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.018"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..571
                     /locus_tag="ACFMWP_000536"
     CDS             <1..571
                     /locus_tag="ACFMWP_000536"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5891184.1"
                     /translation="FHFRKTKKECAVLGTLSRLDTVRAVHLMLDILKKMVDRGMPVRL
                     NVAGIGEEMDNLKAQAKRLGIEDKVTFLGGVRDLTGYFKEVDILVNTPHCVGDHGAGV
                     GNNILEAGLYDTPVVTYNMAGISEMVITGQTGYCIPFGDDEAFIEAVDTLIKHPELRS
                     QMGKALHKHVETLCSDDEIYRTTMAAYEM"
     gene            585..1757
                     /locus_tag="ACFMWP_000537"
     CDS             585..1757
                     /locus_tag="ACFMWP_000537"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5891185.1"
                     /translation="MNITIVAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHY
                     DKSFRRPEDAEAASQGRLKVMLLEESGYSKNVSLGRVTSHHRFVKHFEKWLENCRPGE
                     QDVVFSAYPLIATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHNLLPFA
                     SRANRAYRYADALVAVSQTYLDRAKETNPNVPGEVIYIGADFPKLDAAPAKDFGDDKT
                     RFFYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLDRLKQYACDGIKFYGY
                     IPYAEMMSVAKGCDISVNAIHSHAMQSVTNKLSDYMALQKPILNSQVNDEVAEVLTLL
                     PHADYRSGDVDGFVQADKDILKRKNDPVQSEEIVRRFKRDVAYQKIVNLIERLAHE"
     gene            1750..2367
                     /locus_tag="ACFMWP_000538"
     CDS             1750..2367
                     /locus_tag="ACFMWP_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HFC5891186.1"
                     /translation="MNKFFKRLFDIIASASGLIILSPVFLILVYLIRKNLGSPVFFIQ
                     ERPGKDGRPFKMIKFRSMRDAIDKDGNPLPDSERLTDFGKKLRATSLDELPELWNVLK
                     GEMSLVGPRPLLMGYLPLYNEFQNRRHEMKPGVTGWAQVNGRNAISWDEKFAHDVWYI
                     DNFSFWLDIKILFLTVKKVFVKEGISAEGEATMPYFTGNKTDEKK"
     gene            2354..3328
                     /locus_tag="ACFMWP_000539"
     CDS             2354..3328
                     /locus_tag="ACFMWP_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HFC5891187.1"
                     /translation="MKKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDLNPRMS
                     SACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAAS
                     VHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAK
                     RIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRS
                     GEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFP
                     LTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            3315..4001
                     /locus_tag="ACFMWP_000540"
     CDS             3315..4001
                     /locus_tag="ACFMWP_000540"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC5891188.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDSKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSFQ
                     DLVPIIDSNT"
     gene            4237..4353
                     /locus_tag="ACFMWP_000541"
                     /pseudo
     CDS             4237..4353
                     /locus_tag="ACFMWP_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            4472..5647
                     /locus_tag="ACFMWP_000542"
     CDS             4472..5647
                     /locus_tag="ACFMWP_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HFC5891189.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEF
                     AAFAGTRYAVALSNGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAIIVVHLAGMPAEMDGIMALAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKRLPEWTARRQENAAKLAESLG
                     KFASIRLVEVADYIEHAQYKFYTFVKPEHLKDGWMRDRIVNELNARKVPCYQGSCSEV
                     YLEKAFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR"
     gene            5695..7605
                     /gene="pglD"
                     /locus_tag="ACFMWP_000543"
     CDS             5695..7605
                     /gene="pglD"
                     /locus_tag="ACFMWP_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HFC5891190.1"
                     /translation="MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVRTFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPEITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPNTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TAHPRIMTADEAMLPWHELSVLLDRIRSACDRYDQQAIRTLLINAPTGFAPSDGICDL
                     LWVRETHRKNAV"
     gene            7661..8953
                     /locus_tag="ACFMWP_000544"
     CDS             7661..8953
                     /locus_tag="ACFMWP_000544"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HFC5891191.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDSEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(9005..9841)
                     /locus_tag="ACFMWP_000545"
     CDS             complement(9005..9841)
                     /locus_tag="ACFMWP_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HFC5891192.1"
                     /translation="MIDLHCHSIVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGLAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RY"
     gene            complement(10151..10552)
                     /locus_tag="ACFMWP_000546"
     CDS             complement(10151..10552)
                     /locus_tag="ACFMWP_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891193.1"
                     /translation="MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSW
                     EYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKIL
                     LNKYVCKLTIGIMSAISQEPISLQDLYVDTV"
     gene            complement(10657..10860)
                     /locus_tag="ACFMWP_000547"
     CDS             complement(10657..10860)
                     /locus_tag="ACFMWP_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HFC5891194.1"
                     /translation="MDTTLKNKAEAILGEPLLDEPIRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(10838..11071)
                     /locus_tag="ACFMWP_000548"
     CDS             complement(10838..11071)
                     /locus_tag="ACFMWP_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC5891195.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEE"
     gene            11237..14671
                     /gene="dnaE"
                     /locus_tag="ACFMWP_000549"
     CDS             11237..14671
                     /gene="dnaE"
                     /locus_tag="ACFMWP_000549"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HFC5891196.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPDAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMAERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDYLIKLSNEGLQERMVQLYPDEAERAEKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQVAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDIGGLVQLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            14714..14968
                     /locus_tag="ACFMWP_000550"
                     /pseudo
     CDS             14714..14968
                     /locus_tag="ACFMWP_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(15105..16037)
                     /locus_tag="ACFMWP_000551"
     CDS             complement(15105..16037)
                     /locus_tag="ACFMWP_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC5891197.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMPNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFAAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLNGIDVCLNIGALERGSDCKRREERDMAGQAEQMAAELDRHG
                     AAVFFREYPNADHGNVPFYSLTDCVEYLRKAWQR"
     gene            complement(16107..18263)
                     /locus_tag="ACFMWP_000552"
     CDS             complement(16107..18263)
                     /locus_tag="ACFMWP_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HFC5891198.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVCKRPAKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRHETFYAAADWDINPDTVLGAGYLYQQRHLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMNSHDVFADLKHYFGNGGYGKVGMRYSDRDADSNYAFAGSKLGMKT
                     LAGRPGCNTADDKACAVGLGTEIKQKALAFDASYSRPFRLGNTANEFVIGADYNRFRS
                     TNEQGRTTLYARGGLALNEFRSIPQVDLIANARKGVRGYSHTVATENLDEFGIYGKST
                     FHPADGLSLIGGGRLGHYKIELGEGKTLHKASKTKFTGYAGAVYDLNDNNSLYLSLSQ
                     LYTPQTNLDADGKLLKPRQGNQFEVGYKGSYMDDRLNARVSFYRMKDKNAAAPLNPNN
                     KKTRYAALGKRVMEGVETEISGAVTPKWQIHAGYSYLHSQIKTASNSRDDGIFLLMPK
                     HSANLWTTYQVTPELTIGGGVNAMSGITSSAGMHAGGYATFDAMAAYRFTPKLKLQIN
                     ADNIFNRHYYARVGGANTFNIPGSERSLTANLRYSF"
     gene            18423..19082
                     /locus_tag="ACFMWP_000553"
     CDS             18423..19082
                     /locus_tag="ACFMWP_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HFC5891199.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRDLLEMPSETAVADIARTYSAHYLNPNNRNMTLFPDALPCLDKLKAQ
                     GFRLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGFDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLARHY
                     A"
     gene            complement(19169..20137)
                     /gene="ispH"
                     /locus_tag="ACFMWP_000554"
                     /gene_synonym="lytB"
     CDS             complement(19169..20137)
                     /gene="ispH"
                     /locus_tag="ACFMWP_000554"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HFC5891200.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(20166..20693)
                     /gene="lspA"
                     /locus_tag="ACFMWP_000555"
     CDS             complement(20166..20693)
                     /gene="lspA"
                     /locus_tag="ACFMWP_000555"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HFC5891201.1"
                     /translation="MVLFYRLLKNMSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQ
                     YRERVNVIPSFFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEF
                     ATLGKTGAAMIIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLA
                     VLDNIVHRKTQEEKY"
BASE COUNT         4928 a         5992 c         5328 g         4648 t
ORIGIN      
        1 atttcatttc cggaaaacca aaaaagaatg cgccgtactc ggcacacttt cccgtttgga
       61 caccgtccgc gccgtgcatc tgatgttgga tattttgaag aaaatggttg accgcggtat
      121 gcctgtacgc ctcaacgttg caggtatcgg cgaagaaatg gacaacctca aagcccaagc
      181 caaacgtttg ggcattgaag acaaagtcac cttcctcggc ggcgtccgcg atttgaccgg
      241 ctacttcaaa gaagtcgata ttttggtgaa cacgccgcat tgcgtgggcg atcacggcgc
      301 aggtgtcggc aacaatattt tggaagccgg cctttacgac acgcctgtcg tgacctacaa
      361 catggcgggc atttccgaaa tggtcattac cggccaaacc ggctactgca ttcctttcgg
      421 cgacgacgaa gcatttatcg aagccgtcga tacactcatc aagcatccag agttgcgcag
      481 ccaaatgggc aaagccctgc acaaacatgt cgaaacctta tgctccgacg acgaaatcta
      541 ccgcaccacc atggctgcgt acgaaatgta aggccgtctg aaacatgaac attaccatcg
      601 tcgcccctta ttgctcgctg ccgtccgagc cgcatttcaa ccgcttctgg tatcttgccg
      661 agctgttgtc gcagtcgcat gacgtgttgc tgattaccag caacttcaag cactacgaca
      721 aatctttcag acggcccgaa gatgccgagg ccgcctcaca aggccgtctg aaagtcatgc
      781 tgttggaaga aagcggatac agcaaaaacg tgtctttagg acgcgtgacc agccatcacc
      841 gcttcgtcaa acattttgaa aaatggttgg aaaactgccg tccgggcgaa caagacgtcg
      901 tcttttccgc ctatccgctg attgccacca acctactgtt gggcaaacac aaagcgcgtt
      961 tgggttacaa actgattgtc gatgtgcagg acgtatggcc ggagtctttc tcctcggtcg
     1021 taccgttttt gaaaaaagta ccgcacaacc tgctgccctt tgcttcacgc gccaaccggg
     1081 cctaccgcta cgccgacgcg ctggttgccg tatcgcagac ttatctcgac cgcgccaaag
     1141 aaaccaatcc gaacgtacct ggcgaagtca tctatattgg tgctgacttt cccaaactcg
     1201 atgccgcacc tgccaaagat tttggcgacg acaaaacccg ctttttctac ttgggcacgc
     1261 tcagttacag ctatgacgtg gaaaccgtgt gcaaaggcgt tcggaaactt ttggacgacg
     1321 gcgaaaatgt agagctgcac atcatgggcg gcggccccga tttggacagg ctcaaacaat
     1381 atgcctgcga cggcatcaag ttttacggct acattcctta cgccgaaatg atgtcggtcg
     1441 ccaagggctg cgacatttcc gtcaacgcca tccatagcca cgccatgcag tcggttacca
     1501 acaaactctc tgactatatg gctttgcaaa aaccgattct gaacagccag gttaacgacg
     1561 aagttgccga agtccttacc ctgctgccgc atgcggacta ccgctccggc gatgtggacg
     1621 gtttcgttca agccgataaa gatattttga agcgcaaaaa cgatcctgtt cagtccgaag
     1681 aaatcgtccg ccgcttcaaa cgcgacgttg cctatcaaaa aatcgtcaac ctgattgaaa
     1741 gattagctca tgaataaatt tttcaaacgc ctgtttgaca ttattgcctc cgcctcaggg
     1801 ctaattatcc tgtcgcctgt gtttttgatt ttggtgtacc tcatccgcaa aaacttaggc
     1861 tcgcccgtgt tcttcatcca agagcggccg ggcaaggatg gcaggccgtt taaaatgatt
     1921 aaattccgct ccatgcgcga tgcaatcgat aaagacggca acccgctgcc ggacagcgaa
     1981 cgcctgactg atttcggcaa aaaattacgc gccaccagtt tggacgaact tcctgaatta
     2041 tggaatgtct taaaaggcga gatgagcctg gtcggccctc gtccgctttt gatgggctac
     2101 ctgccgcttt acaacgaatt tcaaaaccgc cgccacgaaa tgaaaccggg cgtgaccggt
     2161 tgggcgcaag tcaatggccg caacgccatt tcatgggatg aaaaattcgc ccacgatgtt
     2221 tggtacatcg acaacttcag cttttggctg gatatcaaaa ttttgttcct gacggttaaa
     2281 aaagtcttcg tcaaagaagg catctcagcc gaaggagaag ccaccatgcc ttatttcacg
     2341 ggtaataaaa ctgatgaaaa aaaataatat actgattctg tcggcaggtc gccgtgtcga
     2401 attggtgcag gacttccaaa ccgaagccgc acgtttttca gacggcatca gcgtttttgc
     2461 cactgacctc aacccccgca tgtcttctgc ctgccatgtt tcggacggtt catttgaagt
     2521 gccgccgatt agtgccgatt catatatcga cagcattttc aatctggcgg tacgcgaaaa
     2581 tatcggttta atcatcccaa ccatagacac cgaactgcaa aagctggcag acgagcgcga
     2641 acgctttgaa gcggcaagtg tccacatcgt cgtttccgat tcggacttca tcgcacaatg
     2701 ccgcgacaaa cggaaaaccg ccaccttgtt tgcccgctac ggcatacgct cacccgaaat
     2761 ttacgaccgc aagaagttgg ttttcccttg cttcgccaag ccttatgacg gcagccgcgc
     2821 catcggtgca aaacggattg acacacctgc cgacctgaca ccggaagtct tggcagacac
     2881 caaattaatg ttctgtcagt ttatcgacat cgaaaataaa ttttccgagt ttaccgtcga
     2941 tatgtattac gaccgtcaat gccgtctgaa atgcgccatc ccgcgaaaac gcttggaagt
     3001 gcgctccggc gaaatcagca aaggcgttac ctgcaaaaac agcctctacc aaacgctgct
     3061 ggaaaaaatg tcggtattgc agggcgcgcg cggctgtatc acggcgcagt tcttctacaa
     3121 cgaagaaacc ggcgaattct acggcgtgga aatcaacccc cgcttcggcg gtggcttccc
     3181 gctgacgtat gccgcaggcg gcaattatcc gagccggttg atgcgcgaat acctcggcga
     3241 cgaagaaatc ccgttttcag acgactggga aaacaacctc attatgttgc gctacgatgc
     3301 caaggtcttg gttcatgaaa acgattaatc ctgaaaccac cgtcatcgtc ttcgacttgg
     3361 acgataccct gtattcggaa tacgaataca agctctccgg tatccgttcg gtcatcgata
     3421 ccgttgccgc actgtatccc gattggaatt cagacaacct atggcgcaac atcgaccccg
     3481 acggcaaaga ttggctggac aaattgtgcc gccactgtgg ttttaatgaa tcggaaaaac
     3541 aggttctttt gtggcaatac cggctgcacc gcccgacgct gactccgtat gctccgccgg
     3601 atttcctgtc cgaactgacc gcgcccttcg ccgcacgcgc gctgattacc gacggcagaa
     3661 gcctgaccca acgcctgaag ctggaagcct tgggtctgtc ttccctgttt gacgacatcc
     3721 tcatctctga agcctgctct tcggaaaagc ccgacagcaa acgcttccgc catcttcaag
     3781 acaaatatgc cgacaaggca ggctgcttca tctatatcgg cgacaacatt tccaaagact
     3841 ttatcgcgcc gaacactttg ggctggataa ccataggatt gcttccctcc ggacagaaca
     3901 tccaccgcca ccagcctgaa agttttaaca cagaatatca tcccgacttt tgggttaact
     3961 cctttcaaga tttagttcct ataattgatt caaatactta accattacat aatcaaacat
     4021 gcactcacaa tattaaaagg actatttcat gacaaaatat tattcatggg gcgtaaacgg
     4081 ctttccgccc tacgttttcg acaccatttg gaaacgatgg aagttgaatg ggcgcggggg
     4141 cggttatcgt gtgcgacatc ccggacggca tgaccgtcgc gggcaatccg gcaaagccgc
     4201 tgccgcgcaa aaaccccaag accgggacgg cataagcgat taaaatatag tggattaaat
     4261 ttaaatcagg acaaggcgac gaagccgcag acagtacaaa tagtacggca aggcgaggca
     4321 acgccgtact ggtttaaatt taatccacta tacacccccg tacagaccga ttttgacaac
     4381 acctgcggcg cgcgcccgat tcttcggaac acgcccccct tcagacggca tagggtcgga
     4441 aatgccgtct gaacccgacg gacaaaccat catgctgaac acctcccttt ccccgtggcc
     4501 ctgcttcacc caagaagaag ccgatgccgt ttccaaagtc ctgctgtcca acaaagtcaa
     4561 ctactggacg ggaaacgaat gccgcgaatt tgaaaaagaa tttgccgcct ttgccggcac
     4621 gcggtacgcc gtcgcccttt ccaacggcac gctggcactc gatgtcgcgc tcaaagcaat
     4681 gggcataggc gcgggcgacg atgtgattgt tacttcgcgc accttcctcg cctccgcctc
     4741 ctgcatcgtg aacgcaggcg caaaccccgt gtttgccgac gtggatttga acagccaaaa
     4801 catcagcgcg gaaaccgtca aggctgtgct gaccccgaat accaaagcga ttatcgtggt
     4861 tcaccttgcc ggtatgcctg ccgaaatgga cggcattatg gctttggcaa aagaacatga
     4921 tttgtgggtg attgaagact gcgcccaagc gcacggcgca aaatacaaag gcaaatccgt
     4981 cggctctatc ggacacgtcg gcgcgtggtc gttctgccaa gacaaaatca tgaccaccgg
     5041 tggcgaaggc ggtatggtta cgaccaacga caaaaccctg tgggaaaaaa tgtggtcgta
     5101 caaagaccac ggcaaaagct acgatgccgt gtaccaccgc gaacacgcgc ccggtttccg
     5161 ctggctgcac gaaagtttcg gcacaaactg gcgtatgatg gaaatgcagg cggtcattgg
     5221 ccgcatccag ctcaaacgcc tgcccgaatg gacagcacgc cgccaagaaa acgctgccaa
     5281 actggctgaa agcttgggca agtttgccag catccgcttg gttgaagtcg ccgactacat
     5341 cgaacacgcg caatacaagt tctacacctt cgtcaaaccc gaacacctca aagacggctg
     5401 gatgcgcgac cgcatcgtga acgaactgaa cgcgcgcaaa gtcccctgct atcaaggcag
     5461 ctgctccgaa gtctatttgg aaaaagcctt cgacaacaca ccttggcggc cgaaagagcg
     5521 tttgaaaaac gccgtcgaac tgggcgacac cagcctgatg ttcttagtac atccgacgct
     5581 gaccgacggc gaaatcgcgt tctgcaaaga acacatcgaa gccgtattga ccgaagccac
     5641 acgataaccc ttcagacggc atatgccgcc tgaaagcaca taccgcccca cgatatgact
     5701 ctggaaaccc tgcttgccct accgcgcaac atcaagaaaa tctgtttcct catacacgat
     5761 tttctgatga ttttcattgc cttttggttt acccaaagcc tgaaggccga ctactcgaac
     5821 gaatggttcg accctgccaa ctggcagtct ttcctattga ccgcgccgtt gaccatcggc
     5881 ctgttcgtca gaatggggct ctaccgtgcc gttacacgct tcatcagctt ccgcatcctc
     5941 tccaccgcgc tggcaggcag cctcgcctcc gccgtattgt tcttcctcaa cacattgatt
     6001 tttgaagaaa ggctgcgcct cgccctgccg attgtctatt tcttactgct gtttgtttcc
     6061 gtgaccggct cgcgtatggt tttgcgcgga ctgttgtccg aacaccccaa aaaacagatg
     6121 atccctgtca tcatttacgg cgcgggacgg tcgggcagac aactgcttga ggccgtcaaa
     6181 caaatgcgcg aatattccgc cgccgccttt gtagacgacg accccaaact gtggcacacc
     6241 gtcatctacg accttgccgt ttaccagccc gatgccatcg ccttcctcat cgaacgctac
     6301 ggcgtggaaa aaatcctgct cgccatcccc ggcgcgaccc aggaacaacg ccgccgaatc
     6361 atcaacaaac tggaagccta tccgtgcgaa gtgttgacca ttcccggaat gaaagacctg
     6421 atggacggaa aaatcagcat cggcacgctc aaaaaaatct ctgtgtccga cctgctcggg
     6481 cgtgattccg tcgcgcccga cgaccgcctg atgagtgccg acatcgaagg caaaaccgtc
     6541 atggtaaccg gcgcgggcgg ctccatcggt tcggaactct gccgccagat tatccgccgc
     6601 cgccccgaaa agctgctgct gttcgagtta tccgaattcg ccctgtacgc catcgaaaaa
     6661 gaattgcgcg aaacctgcat ccaaaaacgc ctcgacaccg aaatcctgcc ctttctcggt
     6721 tcggtgcaaa accgcacgct gctcgaacac gtcatgaccg ccttttccgt tgcgaccgtc
     6781 tatcacgccg ctgcctacaa acacgtcccc atggtcgagt tcaacaccgt cgaaggcata
     6841 cgcaacaaca tcttcggcac actcgagtgc gcgcttgccg ccacgacatc gggcgtaaga
     6901 actttcgtcc tcatctccac cgacaaagcc gtccgcccca ccaacaccat gggtgccagc
     6961 aaacgcatgg cggaactctg ccttcaggca ctcgccgccg aacccggaca aaaaacccgc
     7021 ttcagcatgg tacgtttcgg caatgtttta ggttcgtccg gctccgttgt cccgctgttt
     7081 gaaaaacaga ttgcagaagg cggcccgctt accctgaccc accccgaaat cacacgttat
     7141 ttcatgacca tacccgaagc cgcccaactc gtcatacagg caggcgcgat gggtacgggc
     7201 ggcgacgtat tcgtcctcga catgggtgaa tccgtcaaaa tcatcgacct tgcccgccaa
     7261 atgattaccc taagcggcct caaacccaac acacccgaac aacccgacgg cgacatcgaa
     7321 atcctcatta ccggactgcg tcccggcgaa aaactctacg aagagctgct catcggcgac
     7381 aacgtccgca aaaccgccca tccgcgcatt atgacggctg acgaggcgat gctgccgtgg
     7441 cacgagctct ctgtcctgct cgaccgcatc cgttcggcct gcgaccgtta cgaccagcag
     7501 gcaatccgca ccctgctcat caacgccccg accggctttg ccccgagcga cggcatctgc
     7561 gacctgcttt gggtacgaga aacacacaga aaaaatgccg tctgaacctt cagacggcat
     7621 aacgtacaaa ccaacctacc ttacacacac ggagtttgac atgcagttct cagcattcgg
     7681 cgaaaaattc acgcaacaca gcggcatcct ccaactgatg gacgacctcg gcgacgcgct
     7741 caaaagcgac aagcccgtca atatgctcgg cggcggcaat ccggcgcgca ttccggaaat
     7801 cgatcgggcg ttcgccgaca tattctccaa actggcggcg gaacacgctg tcgagaacat
     7861 cggcaactac tccaatcccc aaggcgatgc cgcgctgatt gacgcgctga ccgccttcct
     7921 caaccgcgaa tacggctgga acctgaccgc cgacaatatc gcgctgacca acggttcgca
     7981 aaacgcgttt ttctatttat tcaacctctt cggcggcaaa ttcaaccttt cagacggcac
     8041 atccgcagaa aaagccattt tgttgccgct cgcgcccgaa tacatcggct atgccgacgt
     8101 gcatgtcgaa gggcagcact tcgtttccgt caagcccaaa atcgaaaacg tcgaacacga
     8161 aggcgaagca ggcttcttca aataccgcgt ggactttgac gcactggaaa acctgcccga
     8221 actcaaagcg ggcaaaatcg gcgcgatttg ctgttcgcgc ccgaccaacc cgaccggcaa
     8281 cgtgctgacc gacagcgaaa tggcgcggct ggacgctttg gcgcgtgaac acgggattcc
     8341 gctgattatc gacaacgcct acggaatgcc gttccccaac atcatttaca gcgacgtaac
     8401 gctgaattgg cacgaaaaca tcatcctctg cttcagcctt tccaaagtcg gcctgccggg
     8461 cgttcgcacc ggcatcatcg tcgccgcgcc cgaagtcgtc aaagccgtca gcagcctgaa
     8521 cgcgattgtg aaccttgccc ccacgcgctt cggcgcggcc atcgccgccc cgctgctgga
     8581 aagcggcgag atgaaacggc ttgccgacca agtcatccgg ccgttttacc gcaatcaggc
     8641 gcaaaccgcc gtctcgctgc tcaagcgcga gctgggcgcg tacccgatga aaatccacaa
     8701 acccgaaggc gcgattttcc tgtggctctg gtttgaaaac ctgcccgttt cttcgcaaac
     8761 cctgtacgaa atgctcaaag ccgaaggtac gctgattatt ccgggcgagc atttcttcgt
     8821 cggcatcgac acgcgggatt acccgcacgc gggcgagtgc atccgcatga gcatcgcgca
     8881 ggacgctcaa acgctggaaa aaggcatcgc cgccatcggc aaaaccgtcc gaaaactgta
     8941 cgacaacgtt taaaccgcaa aaaatgccgt ctgaaaggtt ttcagacggc atttttatct
     9001 gcattcaata tcgggaaaaa tgcgcccaca ccggcctgca gttttccggc agttcgggac
     9061 acgcgccgag aatgccgccg ctaaagtcgt ttaaacggtg gaagtcgctg cccgcgctgg
     9121 cgagcatacc gaagcgttct gccaaaagcg cgtagttgag gcggtcgttt ttgcagcagt
     9181 tgccgctgtg gacttcgatg cctgcgccgc cgaggttttt aaattcttca aacagattgc
     9241 gcttggcggt ggcggacaaa tcataacgca tcggatgggc gatgaccgcc aacccgcccg
     9301 cgccgttgac ggcggagacg cagtcttcca gcgtcgccca ttcgtggcgg acggcgcagg
     9361 atttgccgtc gcccaagtat ttggtgaacg cctgctgctt gtttttgacg tgtcccaccc
     9421 gaatgaggaa ctcggcgacg tgtgtgcggc tgaccatttc tttgtttgcc gccagcgcga
     9481 gcgcgccgtc gtatgcgccc gaaatgccgc gtttttccag cttggcggcg atggcttcga
     9541 ggcgtttcag acggccttgc cgcacttgcg ccaacaggtt ttgcaggttt tcgtcttgtt
     9601 cgtcaaagtc taagccgaca acgtgtatgg tacgcccgcg ccacgttacg gagatttcca
     9661 cgccgttaat caggcgcaaa ccgagcctgt cggcttcggc acgcgcttcg gcgatgccgc
     9721 cggtgtggtc gtggtcggtc aacgccagca gcgtgcagcc gttttgatgc gcgaggcgca
     9781 cgacttcggc gggggaaagc ataccgtcgg aaacgatgga atggcagtgc aggtctatca
     9841 tggggtgtta tgtgtgtggt gaatgaaggt cgggatgttt caatgttgtt gggcagtgtg
     9901 gcggcggcgg tcattttaaa aaacaggtgt atggcaaatg caaaggaaaa gccgctatgc
     9961 cgtcattccc aacccccaaa tgtacggata gagccagtag ggatgggtac attatttgtt
    10021 tgcattatta gttatcctgc tgtatccatt aaatcatatg cttcaattaa ttgttgttct
    10081 agctcttgta ccaattttgg attgcgaatt cctaacgcaa tttcaaacag cgagttctca
    10141 ctatgtacat ctacacagta tctacataaa gatcttgtaa agatataggt tcttggctga
    10201 tggcactcat tattccaata gttaatttgc atacatattt gtttaataaa attttatctg
    10261 tatcaaaatg ataaacttgt tgagttagta tccaagggta ttcttggtat attttctgtg
    10321 ataatttttc attctctata atcgcgaaag gtatctgttt acataacata ccaacagact
    10381 tttcgtttag acagaaaata gcccaatttt ccccatattc ccaagagtat gtaaaatctg
    10441 tttcctgaac aatatcttgt aaaacttgct caaaatccat gttttgccat ttacctttat
    10501 acatacctaa tgcggcactg gttactattt cgtttaagtc ataaatagcc atttatgttc
    10561 cttgctaatt tctaggtgag acatgtatag gactgagacc agtatgccca ttaggttccc
    10621 ctctatacac attaatagta gatgttggtt ccgttttcag acggcatcgt ccgaccaacc
    10681 cgcttctttc aatttccgcc gttgcgcgtc gtagcgggcc ttatccgccc aataaatcgt
    10741 ctgaatgcac gcctcgccgc agtcgctgcc gcaacattcc cacgactcgg ggcggatagg
    10801 ttcgtctaaa agcggttcgc ccaagatggc ttcggcttta ttcttcaggg tcgtatccat
    10861 cggcaatttc caagcgtgcg ccgtcaaatt caatcacttc gccgccgcgt attttggcgg
    10921 ttttacgggt ttcggtttcg ccgttgcgca acaccagccc ttcggcgata aacgcttttg
    10981 cctgtccgcc gctttcagca agaccggcca gtttcaacag gtcgcataaa gcgatgtatt
    11041 cattatcttc aagatagact gttgcttcca tcattcaatc cttttcaata agggcgatat
    11101 tttaacatgg ccgtctgaaa gaaagccccc ttctgtttga tttgctttat ccaaccccat
    11161 tacatttgat tttcagacgg cctttagctg ccaaccctgc tacaatacgc cttttattgt
    11221 tcacgccgat tttgccatga ccgagccgac ctacatcccc ctgcgcctgc ataccgaatt
    11281 ttcgattacc gacggtatgg tgcggattaa aaaactgatt gccaaagcgc aggaatacgg
    11341 tttgcctgct ttgggcatca gcgatttgat gaacgaattc ggtttggtga aattttataa
    11401 agcctgccgc agcgcgggga ttaagcccgt cggcgcggcg gacgtatgga taggcaatcc
    11461 ggatgcgccc gacaagccgt tccgtgctat gctgattatc cgcaacgatg cgggctatct
    11521 gcgcttgagc gagcttttga cggcggctta tgtcggcaaa gaccgcaatg tccatcatgc
    11581 ggaactcaat cccgaatggc tggaaaacgg cgacaacagc ggcttgattt gtttgagcgg
    11641 cgcgcattac ggcgaagtgg gcgtgaatct cttgaacggc aacgaagacg cggcgcgggc
    11701 ggcggcgttg aaatatgcgg cgtggtttcc cgatgcgttt tatctggagt tgcaacgcct
    11761 gcccgagcgt cccgaatggg aggcttgcgt ttcgggcagc gtgaagctgg cggaggaact
    11821 gggtttgccg gtggtggcga cgcatccgac gcagtttatg agccgcgacg atttcaacgc
    11881 gcacgaggcg cgggtgtgta tcgcaggcgg ctgggtattg acggacaaga aacgtccgcg
    11941 cgatttcaca ccgagccagt ttttcattcc gccggaaacg atggccgaac gtttcgccga
    12001 tttacccgaa gccctcgaaa acacggtgga aattgccaaa cgctgcaatc tgcacatcac
    12061 attgggcaaa aacttcctgc cccttttccc cacgcccgac ggtttatcac tcgatgacta
    12121 tctcatcaaa ctctccaatg agggcttgca ggaacgcatg gttcagcttt atcccgacga
    12181 ggcggagcgt gcggaaaaaa tgccggaata tcaggaacgt ttggattttg agctgaacat
    12241 catcatccag atgaaattcc ccggctattt ccttatcgta caagacttta tcaactgggc
    12301 gaaaacacac ggctgcccgg tcgggccggg acgcggttcg ggcgcgggtt cgctggtggc
    12361 gtattcgctg aagattaccg acctcgatcc gctgaaatac gcgctgctgt tcgagcgttt
    12421 cctaaacccc gaacgcgttt ctatgcccga cttcgacgtg gacttctgtc aggcaaaccg
    12481 cggccgcgtg attgaatatg tacgcgaaaa atacggtgcg gaagcagtca gccagattgt
    12541 taccttcggc acgatgtcgt ccaaagcagt gattcgcgac gtggggcgcg tactggaact
    12601 gccgtttatg ctgtgcgaca aactgtccaa gctgattccg ttggaagcca acaaaccttt
    12661 gggtttggac gacgcgatga aggcggagcc gcagattcag gaattaatcg aagcggaaga
    12721 agcggacgaa ctgattacgc tggcgaaaaa gctggaagat ttgacgcgcg gtttgggtat
    12781 gcacgcgggc ggcgtgttga ttgcgccggg caagatttcc gattacagcc ccgtgtatca
    12841 ggcggacgaa tccgcctcgc ccgtatccat gtacgacaag ggcgacgtgg aagacgtggg
    12901 tttggtgaaa ttcgactttt taggtctgcg caacctgacc atcatcgaaa tggcgcagaa
    12961 caacatcaaa aacaccaccg gcgacatcat cgatgtcggc aaaattccgc ttgacgacca
    13021 ggttgcctac caaatcttcc gcgatgcgaa caccaccgcc gtgttccagt tcgagtcgac
    13081 aggcatgaag aaaatgctga aaacggcgca tacgaccaag tttgaagaac tgattgcctt
    13141 cgtatcgctc taccgacccg gcccgatgga caatattccc gacttcgtcg cgcgtatgaa
    13201 aggtcaggaa ttccaataca tccacccgct actcgaaggc atcctcgcac caacctacgg
    13261 gattatggtg tatcaggaac aagtgatgca ggcggcgcag attatcggcg gctactcgct
    13321 cggcggcgcg gacctgctgc gccgcgccat gggtaagaaa aagcccgaag aaatggtgaa
    13381 acaccgcgaa atcttcgccg aaggcgcggc aaaacaaggc atttcgcgcg aaaaatccga
    13441 cgaaatcttc aactacatgg aaaaattcgc cggctacggt ttcaacaaat cccacgctgc
    13501 cgcctacgcc ctgatttcct accagaccgc atggctcaaa gcccactacc ccgccgaatt
    13561 tatggcggcg accatgtcgt ctgaattgga caacaccgac cagctcaagc atttctacga
    13621 cgactgccgt gccaacggca tcgagttcct gccgcccgac atcaacgaat cagactaccg
    13681 cttcacgccg tatccgaaca tgaaaatccg ctacgcgctc ggcgcgatta aaggcacggg
    13741 cgaagccgcc gtcgaatcca tcaccgccgc gcggcaaagc ggcggcaagt ttaccggcct
    13801 cttggacttc tgtgagcgcg tcggcaaaga acacatgaac cgccgcaccc tcgaagctct
    13861 gatacgcggc ggcgcattcg acagcatcga acccaaccgc gccatgctct tggcgaacat
    13921 cgacctcgct atggacaacg ccgaccaaaa agccgccaac gccaatcagg gcgggctttt
    13981 cgacatgatg gaagacgcca tcgaaccggt gcggctcatc gacgcgccga tgtggagcga
    14041 atcggaaaaa ctcgccgaag aaaaaaccgt catcggcttt tacctgtccg gccacccgtt
    14101 cggcccgtat gcccaagaag tccgccaaat cgccccgcag aaactgtcga aactcaaacc
    14161 gcaagacagc gtgcgcctcg ccggattcgt taccgccgta cgcaccatga tgggcaagcg
    14221 cggcaaaatc gccttcgtca gccttgaaga tttgagcgga caggttgaaa tcatggtcgg
    14281 cggtcagacg ttggaaaact gcgccgactg cctcaaagcc gaccaagtgc tgattatcga
    14341 atccaaagtc agccgcgacg actacggcgg cggcgacgga ctgcgtattc tggcaaacca
    14401 agtcatgacc ctgcaaacgg cacgcgaacg ctacgcccgc agcctcagcc tcgccctcgc
    14461 cccgcatcac gacatcggcg gactggtaca actgctcgcc gcccaccaac tgcccgacac
    14521 gccgcgcatc ccgctgcaac tgtcgtatgc caacgaaaaa gcgtcgggca ggcttcaagt
    14581 gccgccgaaa tggacggtta caccgagctc cgcattgttc ggcgaactgg aaacattgct
    14641 cggcagccgg tcggtgcgcg tcaactggta accaaaaata gaaatgccgt ctgaagccca
    14701 aaaaccggtt tcattcgtac tttattcgaa tgattgaata aaagtaactg ccaagaaaaa
    14761 cgtatttttt ggttatttcg ccagtctaaa tagagcaacc gggacgattg atatccgtgt
    14821 gcatgacaca gacagcacca aagggaaaaa cggcattttc caaagtatcg gtatcaaaac
    14881 cgccctttca ctccaaaaat accaaatcga caaaccgggc aaagaaatca gaccgtgccg
    14941 cctgaaaaaa cgcccacccg tccgttaaat taacctatcc ctgtttcaga cggcctgaag
    15001 cagggatttt tatatcaaaa taaaatgaga aagggagcaa taacccttag gtagctcttg
    15061 ttattttccg atgcaaaaca aagcagtcat atatttaatt ccccctacct ctgccaagcc
    15121 ttcctcaaat attcgacgca atcggtcagc gagtagaacg ggacattgcc gtggtcggca
    15181 ttcggatatt cccggaaaaa gacggcggcc ccgtgcctgt ctaactctgc cgccatttgt
    15241 tcggcctgcc ctgccatatc gcgttcttcc ctgcgtttac aatcgctacc ccgttctagc
    15301 gcgccgatgt tgaggcagac atcgatgccg tttagccggt tttcagacgg cataaagtcg
    15361 agtatccgcc tgttgtgcca ccaaatcgat ggggatacga gccaatgccg tctgaaacgg
    15421 cggtgggaaa gcagggaata cagtccgaac agtgcgccga acgagtgtcc gaatacggcg
    15481 gtttcattgc ggttgagggt gtagcggctt tctaaaaagg cggtcagctc gctgtcgata
    15541 aaggcggcga agcggtctgc ctgtccgaac tgctgccgtt cgtctgctgt ggcgttgtct
    15601 ccaagcggcg gcgtgtagtc ggcggcacgt tgtgccaaat cgcgcacact gcctgtcgtg
    15661 tagccgatac cgacaatcag gcagggggcg ttgcttcggg taacggggtt gggcatcagc
    15721 gactgcatga tgttgaaaag tgcggggaaa aaggcttcgc cgtccaaaac gaagaggacg
    15781 ggatagcctt cagacggcat ttcgccgagt gtcgccgtct gaatccgata gattcgcccc
    15841 gtgcaggtgg atttgatttc ggtttcaaag gcttggggca gtatggcagg ttggaatgtg
    15901 tcggtcggta tgggtttcat gatgttcggc ttgtgggtca gactggcggc aagcggtaaa
    15961 accgaaccgg caaagcggtc tgcctgccgg ttcggtctgt tttccttcgc aatgccatac
    16021 tccagttgtg agagcatagg gtatgcagcg cagcttgttg tggtttgatg atgctgcggc
    16081 tgccgtttca gacggcatat tggtctttaa aaactgtaac gcaggtttgc cgtcaggctg
    16141 cgctccgaac cgggaatgtt aaaggtgttc gcgccgccga cgcgggcgta gtaatggcgg
    16201 ttgaagatgt tgtcggcgtt gatttgcagc ttcagcttgg gcgtgaagcg gtatgccgcc
    16261 atcgcatcga acgtggcata accgcctgca tgcatccctg cagatgaagt aatgccgctc
    16321 atcgcgttca cgccgccgcc gatggtcagc tcgggcgtaa cttggtaagt cgtccacagg
    16381 tttgcgctgt gtttgggcat caataggaag atgccgtcgt cgcgtgaatt ggaggcggtt
    16441 ttgatttggc tgtgcagata gctgtaacct gcatggattt gccatttcgg tgtaaccgcg
    16501 ccgctgattt cggtctcaac gccttccatc acgcgtttgc ccaatgcggc gtaacgggtt
    16561 tttttgttgt tcgggttcaa cggtgcggcg gcgtttttgt ctttcatgcg gtagaacgaa
    16621 actcgggcat tgaggcggtc gtccatgtag ctgcctttgt aaccgacttc aaactggttg
    16681 ccttggcgcg gtttgagcag cttgccgtcg gcatcgaggt tggtttgcgg tgtgtagagc
    16741 tgggacaggc tcaggtagag gctgttgttg tcgttcaagt cgtaaaccgc gcctgcgtag
    16801 ccggtgaact tggttttgct ggctttgtgc agggttttgc cttcgcccaa ctcgatttta
    16861 tagtgtccca aacgtccgcc gccgataagc gacagcccgt cggcaggatg gaaggtggat
    16921 ttgccgtaaa tgccgaattc gtcgaggttt tcggtagcga cggtatggct gtaaccgcgc
    16981 acgcctttgc gcgcgttggc aatcaaatca acctgcggta tgctgcggaa ctcgtttaaa
    17041 gccaggccgc cgcgtgcata taaagtagta cggccttgtt cgttggtgct gcggaagcgg
    17101 ttgtaatcgg cgccgatgac aaattcgttg gccgtattgc ccaagcggaa aggcctgctg
    17161 tagctggcgt caaacgcgag ggctttttgt ttgatttctg tacccaaacc caccgcgcag
    17221 gctttgtcgt cagccgtatt gcagcccggg cggcctgcca gggttttcat gcccagcttg
    17281 ctgccggcaa aggcatagtt ggagtcggca tcgcggtcgg aatagcgcat accgactttg
    17341 ccgtagccgc cgttgccgaa gtaatgtttc aaatcggcaa acacgtcgtg gctgttcatt
    17401 ttaaatttgt tccaatccgc gccgacaaat acgtgttgcg gcagggacgg taatttgtta
    17461 ttggcatcgg ctggcaagcc gttgtacggc gcgaggtggc gttgctggta aagatagccc
    17521 gcgcccaaaa ccgtatcggg gttgatgtcc caatccgccg ccgcgtagaa ggtttcgtgc
    17581 cggttgtttt tctcggcggg acgcggagac gcgccgacgg tctgcgccat cacgcggccg
    17641 cgcacgctgc cgtctgaatt gaggctgccc gatacgtccg cctcggcttt atattgtttg
    17701 tgcgtaccga accctgccgc agcatgacct tggaacgctt tggccgggcg tttgcacacc
    17761 agatttacga tgccgcccat ctcgccgctg ctgtcgaaca agccgctcgg cccgcgcatc
    17821 acttccacac ggtcgaaggc aaacagattg ggcagcgtgc cgttgatact ctgcatctgc
    17881 gcgggcaggc cgtcgatgtt gtattcgctg tattcgtaac cgcgcgcgta aaccgaagag
    17941 cgtccgtcgt cgttgctcaa cacgcgcagg ccgggcgttt tgcgtgccaa ctggtcaaac
    18001 gtatcaacat tgcggtcttt gacctgttga ttggtgatga tgctgacaga ttgcggaatt
    18061 tcgcgcaaag aagcggggat ttttgtgccg acggtggcgg caaacgagct gtaatcgccg
    18121 tttttctcgg tggcaatcgc gttgtacgaa cgctgaccct taatatggac ggtttccaaa
    18181 tccgccgttt gtgcggcaaa aaccgaagac gaaagtgctg ccaaaaccgt ggcggcggtc
    18241 atattgatgc ggaaaactga cataaactgt cccattcaca taaatgataa tggttctatt
    18301 ttaataaagc acaacgcggc ttgttcggaa aaacatatcg cgcagccgac aaattttgtc
    18361 gaaaatgcga cacgtctgcg ttttccgcat aaaatctgac ttttcaccgt aaacaacctg
    18421 ccatgaccac gcccaaactc atcatcttcg actgggacgg cacgcttgcc gatacgaccc
    18481 aacccatcat cgacaccatg cgccgcagct tcgccgaatg cggttttccg ccgcccgaag
    18541 cggaacgcgt ccgcagcctg attggctaca gcctgcccga aatcatccgc gacctgctcg
    18601 aaatgccgtc tgaaaccgcc gttgccgaca tcgcgcgcac ttattccgcg cattacctca
    18661 atcccaacaa ccgcaatatg acgctctttc ccgatgccct gccctgtctg gacaagctca
    18721 aagcacaagg cttccggctt gccgtcgcca cgggcaaagg gcgggcgggt ttggacaacg
    18781 ccatcagcca aaccgccacc ggcggctatt ggctcgccac cgcctgcgcg ggggaatatc
    18841 cctccaaacc ctcgcccgaa atggtattcg gaatctgcgg cgaactgggg ttcgacccga
    18901 aagaggcatt ggtcgtcggc gatacggcgc atgacctgca tatggcggca aacgcaggcg
    18961 cggcggcagt cggcgtggcc accggcgcac attcgcgcga acagctcctt agcgcaccgc
    19021 atctcgccgt attggacggt ttgtccgaac tgcccggttt tcttgcacga cattacgcct
    19081 gattggtttc cgcatccggc acgcggcaaa aatgccgtct gaagcctgtt cagacggcat
    19141 ttgtgttgcc caaacattca acgcttgctc aacgtttgca caaatcgggt ttggtttcgc
    19201 cctcgcggcg cagctctttg ggcaggacga acacaatgct ttcttccgca ccctcgcctt
    19261 cgcgtacggt ttcgtgcccc catccgcgta tggttgccag tacttcccgc accaacactt
    19321 cgggcgcgga cgcgcctgcc gttacgccga ctttgttttt gccctcaaac catgcgcgtt
    19381 gcaggtagcc tgcattatcc accatatacg catcgattcc gcgcgatgcc gccacttcgc
    19441 gcaagcggtt gctgttggac gaattgggcg aaccgaccac aatcacgatg tcgcactgtt
    19501 ccgccagctc tttgacggcg gtttgccggt tggtcgtcgc atagcagatg tcttccttgt
    19561 gcggattgcg gatattgggg aaacgcgcgt tcagcgcggc gatgatgtct ttggtttcat
    19621 cgaccgagag cgtggtttgg ctgacatagg cgagtttgtc ggggtttctg acttcgagtt
    19681 ttgccacatc tccgaccgtt tcgaccaaaa gcattttgcc cggcgcaagc tgccccatcg
    19741 ttccttcaac ctcgacgtgc cccttatgcc cgatcatgat gatttcacag tcttgggcat
    19801 ccagtcgggc gacttcctta tgcactttcg tcaccagcgg gcaagtcgca tcaaacacgc
    19861 ggaaaccgcg ctccgccgct tcttgccgca ccgccttcga tacgccgtgt gccgaataaa
    19921 ccagtgtcgc gcccggcggc acttccgcca agtcttcaat aaacaccgca cctttttcac
    19981 gcaggttgtc cacgacgaat ttgttgtgaa cgacttcgtg gcgcacataa atcggcgcgc
    20041 cgaactcttc caaagcacgt tcgacaatac tgattgcccg atccacacca gcgcagaagc
    20101 cgcgcggatt ggcaaggatg atggttttct cgttcataag cccggtattt cgttttcaga
    20161 cggcatcaat atttttcttc ttgggtttta cggtggacga tgttgtccaa caccgccaac
    20221 accgcaccga cgcagataaa gctgtcggca atattaaagg cgggataaaa ccaattttgc
    20281 caataaaaca ataagaaatc gacgacatga ccgtgtatca ggcggtcgat gacattgcct
    20341 aacgcaccgc cgataatcat tgccgcaccc gttttgccga gggttgcaaa ctcatcgcgc
    20401 aagatggcgc gtaccaaata cgcgctcacc gccaccgcca gcaccaaaaa aaagtatttt
    20461 tgccagccgc cctgatcggc aaggaagctg aacgccgcac ccgggttgta caccagcgtc
    20521 agatcgaaaa aggaaggaat gacattgacg cgttcccgat actgaaacga cgacagcacc
    20581 gcccacttcg accactggtc cagcacgatg gcggcaagtg ccaataccca atagcgcgtt
    20641 ttacttgaaa cagatgaaga catatttttc aacagccggt aaaagagtac cattttaccc
    20701 gaaaaccccc tttcctgtac ccgaaacggc aaatgccgta atcttaaaac ccgtcattcc
    20761 cgacaacacc gtaatctcga aacccgtcat tcccgcgtag gcgggaatcc agacctgtcc
    20821 gcacagaaac ttatcggata aaaacagttg cccaaacccc gcgttctata gtggattaaa
    20881 ttcaaaccag tacggc
//
LOCUS       DAXHKG010000019        20878 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.019, whole genome shotgun sequence.
ACCESSION   DAXHKG010000019 DAXHKG010000000
VERSION     DAXHKG010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20878
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.019"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(23..715)
                     /locus_tag="ACFMWP_000556"
     CDS             complement(23..715)
                     /locus_tag="ACFMWP_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC5891202.1"
                     /translation="MFHAFILRIYTMIKNISKLINHAVLIGFIPNIVFAYPIFAENPA
                     SYQNIHVRSWKARRDSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAEILDKMDKTQM
                     RASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFSVLNGINGETV
                     LLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMFFNKNPVRQTR
                     FTVEQIQMRQKR"
     gene            complement(1021..1578)
                     /locus_tag="ACFMWP_000557"
     CDS             complement(1021..1578)
                     /locus_tag="ACFMWP_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891203.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLEIWHGDRVFMH"
     gene            complement(1823..1981)
                     /locus_tag="ACFMWP_000558"
     CDS             complement(1823..1981)
                     /locus_tag="ACFMWP_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891204.1"
                     /translation="MKPPLPICTLSALAACTLSGQGGTQVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(1978..2820)
                     /locus_tag="ACFMWP_000559"
     CDS             complement(1978..2820)
                     /locus_tag="ACFMWP_000559"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC5891205.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3059..3979
                     /gene="pyrB"
                     /locus_tag="ACFMWP_000560"
     CDS             3059..3979
                     /gene="pyrB"
                     /locus_tag="ACFMWP_000560"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HFC5891206.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            3989..4447
                     /gene="pyrI"
                     /locus_tag="ACFMWP_000561"
     CDS             3989..4447
                     /gene="pyrI"
                     /locus_tag="ACFMWP_000561"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HFC5891207.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4512..5177
                     /locus_tag="ACFMWP_000562"
     CDS             4512..5177
                     /locus_tag="ACFMWP_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891208.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALDLGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5240..6457)
                     /locus_tag="ACFMWP_000563"
     CDS             complement(5240..6457)
                     /locus_tag="ACFMWP_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC5891209.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWGRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFDRSE"
     gene            6641..7144
                     /gene="def"
                     /locus_tag="ACFMWP_000564"
     CDS             6641..7144
                     /gene="def"
                     /locus_tag="ACFMWP_000564"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HFC5891210.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLIADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            7231..8157
                     /gene="fmt"
                     /locus_tag="ACFMWP_000565"
     CDS             7231..8157
                     /gene="fmt"
                     /locus_tag="ACFMWP_000565"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HFC5891211.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8236..9495
                     /gene="rsmB"
                     /locus_tag="ACFMWP_000566"
     CDS             8236..9495
                     /gene="rsmB"
                     /locus_tag="ACFMWP_000566"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HFC5891212.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAILRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLAAEGIPARALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9461..10060
                     /locus_tag="ACFMWP_000567"
     CDS             9461..10060
                     /locus_tag="ACFMWP_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HFC5891213.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10060..12177
                     /locus_tag="ACFMWP_000568"
     CDS             10060..12177
                     /locus_tag="ACFMWP_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC5891214.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLISTASLSGNMGRVLEHY
                     ANGFTQLSLYNAASGKIEKSINPHKLDQPFPDKARWEKIQQAGSVRDLESIGGVLYAQ
                     GWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLL
                     IASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKL
                     FNHMTEQLSIAKEADERNRQREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQ
                     ILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKILL
                     GKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAERL
                     AWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALIG
                     DVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVKS
                     EAGQDGRIVLTVCDNGKGFGKEMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRIS
                     LSNQDAGGACVRIILPKTVKTYA"
     gene            12170..13447
                     /locus_tag="ACFMWP_000569"
     CDS             12170..13447
                     /locus_tag="ACFMWP_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HFC5891215.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QVRPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKHGAAKIETGPVFDKLGNSAAIQEMNCEVEAAAKRTSPVF
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQTGIAFIIGKAERCRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13538..14731
                     /gene="dprA"
                     /locus_tag="ACFMWP_000570"
     CDS             13538..14731
                     /gene="dprA"
                     /locus_tag="ACFMWP_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HFC5891216.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     ALAVRHKQAAEAWRNAEKRASARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPVVSGMASGIDT
                     AAHQGALQAEGGTIAVWGTGIDRIYPPSNKNLAYEIAERGLIVSEFPLDTRPFAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPRLLQNEGASSYSINKGMPEKRITAVQTASDQLSLPEGKMPS
                     EKTENRPVGGSILDRMGFDPVHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRY
                     QRIRT"
     gene            14757..15218
                     /locus_tag="ACFMWP_000571"
     CDS             14757..15218
                     /locus_tag="ACFMWP_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HFC5891217.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15290..17596
                     /gene="topA"
                     /locus_tag="ACFMWP_000572"
     CDS             15290..17596
                     /gene="topA"
                     /locus_tag="ACFMWP_000572"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HFC5891218.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIAGGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAESCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17669..18364)
                     /locus_tag="ACFMWP_000573"
     CDS             complement(17669..18364)
                     /locus_tag="ACFMWP_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891219.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFK"
     gene            19055..19432
                     /locus_tag="ACFMWP_000574"
     CDS             19055..19432
                     /locus_tag="ACFMWP_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC5891220.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNV
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19521..20090
                     /gene="rsmD"
                     /locus_tag="ACFMWP_000575"
     CDS             19521..20090
                     /gene="rsmD"
                     /locus_tag="ACFMWP_000575"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HFC5891221.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20213..20464
                     /locus_tag="ACFMWP_000576"
     CDS             20213..20464
                     /locus_tag="ACFMWP_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HFC5891222.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            20561..20644
                     /locus_tag="ACFMWP_000577"
     tRNA            20561..20644
                     /locus_tag="ACFMWP_000577"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20595..20597,aa:Tyr,seq:gta)
     gene            20675..20748
                     /locus_tag="ACFMWP_000578"
     tRNA            20675..20748
                     /locus_tag="ACFMWP_000578"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20707..20709,aa:Gly,seq:tcc)
     gene            20758..20832
                     /locus_tag="ACFMWP_000579"
     tRNA            20758..20832
                     /locus_tag="ACFMWP_000579"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20790..20792,aa:Thr,seq:ggt)
BASE COUNT         5250 a         5285 c         5673 g         4670 t
ORIGIN      
        1 taaatgggca aaaatcggtt tattatcgtt tttgccgcat ttggatttgt tctaccgtaa
       61 aacgtgtttg acgaacggga ttcttattaa aaaacatctg atttctaaca aaatcagtat
      121 tttttggcac gatggctaaa atttttcctt ccatttcgcc atcacgtgtt ttccatgcgc
      181 tcaagaattg tgatttgctc attgagacgt gccccagcga tggatcagcc agcaaaacag
      241 tttctccgtt aataccgttc aataccgaaa aatggttgtt tttacggtat tttaaataca
      301 caattacagg aatttttagt tgtaccaact gttcaaatgg caaagcataa ccttgtgctt
      361 caaaacccag ttcgggcatt atgcgttgca tatcatcaaa agaagcacgc atttgggttt
      421 tatccatttt gtccaagatt tccgcttcag aataatgtct gccataaaaa ttattcagta
      481 acgtggcaat cgaagccgcg ccgcaagaaa aatccaaatc ttgttttact atgccggaat
      541 ctcgccgtgc tttccaactc cgtacatgga tgttttggta agaagcgggg ttttcagcaa
      601 atatagggta agcaaaaaca atatttggga taaagccaat taaaaccgca tggtttatta
      661 atttagaaat attttttatc atagtatata tgcgtagaat aaacgcatga aacataaaaa
      721 aataaaatca tatgcaattt tattgcatga ataaatatga ataaaataga taatgatggg
      781 agtaaatacg ccatgtattt tggaagttta aatttattaa taataaaata atttatcgta
      841 gcgcaaataa atcccaaaat tggaacgatt agaaaaaaaa ttaatacacc catcatcatg
      901 caaactctat attaataaat agctaactaa ttctattgtg gaaattagtt agctaactaa
      961 aagttattaa tgattatttc cgagaattga ctgcattgtt ggcagcattg gccccaaaac
     1021 ctagtgcatg aatacccggt ctccatgcca aatttccagc caatccgcct ccggcagcag
     1081 cagccagccc tgttttgccg ctactcctgt tgccgcaccg attcctgccg cagtagccgc
     1141 gccttgcgca gttcctaatt taccatgatt atacaaatta gcaccatgat actcccatgc
     1201 acctaatgca ccgccaaaag cagcggctgc aataatggga acaaattcac cttgtgtttc
     1261 tttcatttca gcctgtgata attgaattgc tttcacattt tggctgtcaa aaacttggct
     1321 gtctaaattt tgcgccatta caggtgtaat catcatagcc attacagttg caattttcgt
     1381 tgcgctggtt tgcacataaa taggattagc aaattcgctt tgattgcgtt cagtgttgat
     1441 gtagctaata ctgctttcta gtttgaattt acccttgtca gtcaataatt cttccaaact
     1501 taaaggtaag tcagcataag caatttggct ggcaacagtc aaaataaaat ctattagaca
     1561 tttgtgtttt tgcatcattt cgtttgattt tctagttttt gagaatgata caaagttttt
     1621 ttacaaagta aagagtcact ctgaaaaaca ttttttcatt ataaatcaaa atattgatag
     1681 aataaatagc gagcatcgat tcacggtgta ctttagtgca aagcgtacaa cgcgagcctg
     1741 aaccaccagc cgcaacagga aaagaaagcc gatagagtgc aatgcttgcc aacgtgcaag
     1801 cgagcttgca agaacgcttg gctcaacgag agcaggcaag acagaaagca gaaagcagga
     1861 taggagcggt aacgcaaagg tctcgggctt tgatttcgcc gtaaacctga gtgccgcctt
     1921 gtccggaaag ggtgcaggcg gcgagtgccg acagggtgca gatggggagg gggggtttca
     1981 tttggggtcg caacggaagt ggtatgcgca gatttcaaaa ccgtttttga aatacaggcg
     2041 gtgcgcgtcg gcacggtcgt ggttgacgtg gacgttgagg tggattttgg ttacccctgt
     2101 ttccgcgccg attttgcgga cttcttccaa aaggcgcgag gcgtagcctt tgcggcggct
     2161 ttgcggcagg gtaacgatgt catcgatgtg gatgtggcgg ccgctggcga gggtgcaggc
     2221 ttcgcggaag ccgcagacgg cgacggcatt gtgtttgcct tcttcaaaaa tacccagcag
     2281 gcggtagcct tgggggcgtt ggactttgtt gatctgttcg gtaaagcggt tgatgtcggt
     2341 cagggcggaa cgcaaaacgc tcaaggctgc aaaggcggtg gcggtgtcgt ccgcgccgat
     2401 ttcgcgcaaa acgtaggatg cgcccgaggc ggtctgttcc tgtgctttct cggcggcgtg
     2461 tttttcttcg attgcctgtg ccagcatgac gtgttcgtcg gcagggttgt tttgtccgcc
     2521 ctgttcgcgt tcttcgagca gggctttgca gtcgatgacg cgcaggtcgt tgtcggcggc
     2581 aaagtccatc aggaagcgga acatttgggg gttgtcggtt tccagttttt tatcgacggc
     2641 gacgcagcgg atgttgtcca ccagcatggg gcgcacccat ttcgaatagg aaagcctgtg
     2701 gtctttggtg aacgaggaca gaatgccgca caggcgttcc gcccagtcgc tgggacggaa
     2761 aatcttgccg gaactcgttg tgccgtggat gacgacttcg taggggttgc agactaacat
     2821 ggcggcttcc tgaaaagaaa tgtctggcgc gattatacct tatgcttatg cgggcgtgtt
     2881 tggatatgcc gtctgaaaag tacgggattc gtgcggtaaa actttgcggc ggcaaatgtg
     2941 cgataatacg cgccgtattg ccgcttttgc gaagctgttc cgcaaacata cgggcggcgt
     3001 ggacgacgta taaccggata cccgcctgac gcgggttttt tacggaaggg gggcaaaaat
     3061 gcctaatccg ctttacagac agcatatcat ctccatttcg gatttgtcgc gcgaacagtt
     3121 ggaatgcctg cttcagacgg cattgaagct gaaggcgcat ccgcgcggcg atttgttgga
     3181 aggcaaactt atcggttcgt gcttctttga accgtccacg cgcacgaggc tgtcgtttga
     3241 aacggcggtg cagcggctgg gcggcaaggt catcggcttt tcggacggcg cgaataccag
     3301 tgccaaaaaa ggcgagacgc ttgccgatac cgcccgcatc atttccggct acaccgacgc
     3361 aatcatccaa cgccacccca aagacggcgc ggcgcgcgtg gcagcggagt tttcgcgcgt
     3421 ccccgtcatc aacgccggcg acggcaccaa ccagcacccc agccagacct tgttggatct
     3481 ggttaccatt tatgaaacgc agggacgttt ggacaagctc aaaatcgcca tggcgggcga
     3541 cttgaaatac ggacgtaccg tgcattcgct ttgtcaggcg ttgaaacgct ggggctgcga
     3601 atttgccttt gtttcgccgc ccagcctcgc gatgcccgac tacattaccg aagagttgga
     3661 cgaagccggc tgccgatacc gtatcctcgg tagtttggaa gaagcggcgg aatgggcgga
     3721 catcctgtat atgacccgtg ttcaacgcga acgtttcgac gaacaggaat ttgccaaaat
     3781 ccaaggcaaa ttcaatctcg acgcatccat gcttgcccgc gccaaaccga acctgcgcgt
     3841 gctgcaccct ttgccgcgcg tggacgaaat ccatcccgat gtcgatgcta cgccgcatgc
     3901 ctattatttc gagcaggcga ccaacggcgt ttatgcgcgt atggcgatat tgtcgctggt
     3961 gttgaacgaa gaagtgtgag gaaccgatat ggaaaccccg aaactcagtg tcgaagccat
     4021 tgaaaaaggt acggttatcg accatattcc cgccggcagg gggctgacca tcctgcgcca
     4081 gttcaaactt ttgcactacg gcaacgcggt aaccgtgggc ttcaacctgc ccagcaaaac
     4141 ccaaggcagc aaagacatca tcaaaatcaa aggcgtgtgc ttggacgaca aagccgccga
     4201 ccgcctcgcc ctgttcgccc ccgaagcggt ggtcaatacc atcgacaatt tcaaggtcgt
     4261 gcagaagcgg catttgaacc tgcccgatga aattgccgaa gtgttccgtt gcccgaacac
     4321 gaattgcgcc ggccacggcg agccggtcaa aagccggttt tatgttaaaa aacacaacgg
     4381 gcagacgcgg ctgaaatgcc attactgcga aaaaacctac agccgggatt cggtggcgga
     4441 agcctgacgg attcccttaa accgagcggg cggcatttcg tctgccgctt gttttgccaa
     4501 tctgaaatgg aatgatgatg cacgcttctg tccaaagccg tttcgcaccg atactttatg
     4561 ttttgatttt ctttgccggt tttttgaccg cgcaaatttg gttcaatcag aaagcctata
     4621 ctgaagagct gcctccgctt ctgtccgcat tgtccgccgt cgcgctggtg tggctggcgt
     4681 gggcgttcgt gtcggcgcgt tcaaaggcta aggcggaaaa gttctaccgc gaaaaaatga
     4741 tacagaacga aagcatacac cccgtcctgc acgcttcttt gcaacacttg gaacacaagc
     4801 cgcaaatgct cgccctgctg gtcaaaaacc acggcaaagg gatggcggaa caggtcaggt
     4861 tcaaggcgga agtgctgccc gacgacgaag acgcgcgcac gattgccgcc gagttggcaa
     4921 aaatggatat gtttgcattg gggacggacg cggtcgcctc gggcgaaacc tatggacgcg
     4981 tgttcgccga tattttcgag ttgtcggcgg ctttggaagg gcgcgcgttc aaaggaatgt
     5041 tgaaactgac ggcggaatat aaaaacatct tcggcgatgc ctgccgttcg gaaacggcgt
     5101 tggatttggg cgcgctcaat caggcgttgc aggagatttc aaaaacatcg gaaaagtcca
     5161 aacggatatt ttattgaaga tggaaaaatg ccgtctgaaa cggaaggtgt ttcagacggc
     5221 atttttgtcg gatgattaat tattcggagc ggtcgaagcc aaacttcacg cggctgcggc
     5281 cctgatccgg tatattgtcc aaatcgcgtc ccggattggc ggcggtgtcg cctacggaaa
     5341 tatcggagat gttttccaaa atgatggcgg acgacaggtg ttcggaggtg cggtaaacca
     5401 ttgccaagcc cacttcttcg gcaggagtgg aaatcagctc gacggtatcc ctgcttttga
     5461 aattgttgga gaggtcgacc tgcatcgttt tcttgcgttt gtagaggctc aaaaccgtgc
     5521 ctttgtccaa accgtccgcc tcgcctttgt cgatggtgat ggtttgaaac tggccggcaa
     5581 tccttgtacc ttcaaacacg gaaacgattt tagcctgaac cgggcgggac ggttcgtgcg
     5641 gcatcatgtt gaagcggtcg gtgtcttccg gcattttcat caggtagtcg ccctgctgta
     5701 tttcggaaat ggcggtttcg accaccagcg gctgtatcga aggggtgcgc agcggggtaa
     5761 tcaaaggatg ggtgcgggta tggtattcgt tgtctttcgg ccgttctcca gcctgtttcg
     5821 agcgttgttc gaggacagag tcggtatagt cgagggagcg cacgatgccg ctgaatgcga
     5881 cttcctgccc gaggaattta cccgtatccg gatcggtgat gtttttattg attcggtagg
     5941 tcaggtagcg gcccggctct ttcaggcctt tggtgtaaac cctggtgcct ttggtgtaca
     6001 gcagcctgcc ttccgggccc gagagcaggc gcggcgcggc agcggtttct ttgcgggaaa
     6061 cgatttgcgg gtgccgcata aagatgcggt agaagttgac atcgatggcg ggaataccgt
     6121 atccggacac ttccttatcc ggactcattt tgacgacggg gatgccgtct gtctgttcca
     6181 agccgaggcg cggttcgccg tcaacgtggc gcaacaccaa tacctggtcc ggataaatca
     6241 ggtcgggatt gtggatttga tcccggttcg cgtcccacag gcggccccat tgccacgggc
     6301 tgtacaggta tttgcccgaa atgccccaca gggtgtcgcc ctgtttgacc gtgtagcgtt
     6361 ccggcgcgtt cgggcgcacc tccaaatttg ccgccaaagt ttgtgttgag aatgccatac
     6421 ctgccgcgca gagcagggtt ataatacgac gttgcataac cgttcccctt atctgataaa
     6481 tttcggtttg tcttgcttga ttgggttgga aaaagcggcg gcagcccctc gggatgtgcc
     6541 gcgtgataaa aaatgttccg cattttaaca tcgaattatc cgcaccatca cggtaattat
     6601 gaaaaacagg cggcgtatcc gccgaaggaa agagaaaatt atggctttat tgaatatctt
     6661 gcaatatccc gacgagcgtc tgcacacggt ggcaaagcct gtcgaacaag tcgacgagcg
     6721 catccggaag ctgattgccg atatgtttga aacgatgtac gaatcgcgcg gcatcgggct
     6781 ggcggcgacg caggtcgatg tgcacgagcg cgtggtcgtg atggatttga ccgaagaccg
     6841 cagcgaaccg cgcgtgttca tcaaccccgt catcgttgaa aaagacggcg aaaccactta
     6901 cgaagagggc tgcctgtccg tgccgggcat ttacgacacc gtaacccgcg ccgaacgcgt
     6961 caaggtcgag gctttgaacg aaaaaggcga aaagttcacg ctggaggcgg acggcttgct
     7021 ggcgatttgc gtgcagcacg agttggacca cctgatgggc atcgtgtttg tcgaacgcct
     7081 gtcgcagctc aagcagggac gcatcaaaac caagctgaaa aaacgtcaga aacatacgat
     7141 ttgacccttt tgccgtgccg tctgaacgct gcaaagtttt cagacggcac ggtcttgtcc
     7201 gacaacctta cgcatacgca ggaatatgct atgaaagtca tctttgccgg cacgcccgat
     7261 tttgccgccg ccgccttaaa agccgttgcc gccgccggtt ttgaaatccc gctggtgctg
     7321 acccagcccg accgtccgaa agggcgcggt atgcaactga ccgccccgcc cgtcaaacaa
     7381 gccgcgctgg aactcggttt gcgcgtggca cagcccgaaa aactgcgtaa caacgccgaa
     7441 gccctgcaaa tgctcaaaga ggtcgaggca gacgtaatgg tggttgccgc ctacggtttg
     7501 attctgccgc aggaagtgtt ggatacgccg aaacacggct gcctcaacat ccacgcttcg
     7561 ctgttacccc gttggcgtgg cgcggcgccg attcaacgcg cgattgaagc cggcgatgcc
     7621 gagacaggcg tgtgtattat gcagatggac atcggtttgg acaccggcga tgtggtcagc
     7681 gaacaccgct acgccatcca accgaccgat accgccaacg aagtccacga cgcgctgatg
     7741 gaaatcggtg cggcggcggt tgttgccgat ttgcaacagc ttcaaagcaa aggccgtctg
     7801 aacgcggtca aacagcccga agaaggtgtt acttacgccc aaaaactaag caaagaagag
     7861 gcgcgtatcg attggagcga aagcgcggcg gttatcgaac gcaaaatccg cgccttcaac
     7921 cccgtgcctg ccgcgtgggt tgagtatcag ggcaagccga tgaaaatccg gcgggcggaa
     7981 gtggtggcgc aacaaggcgc ggcaggcgaa gtgttgtcct gttcggcgga cggtttggtc
     8041 gttgcctgcg gcgaaaacgc gctgaagatt accgaattgc agcctgccgg cggcaggcgt
     8101 atgaatatcg cggcgtttgc agcaggacgg catatcgaag cagggacgaa gctgtaaatc
     8161 ccttcagacg gcattccgat ccgcaaacgg gaatgccgcc tgaaaccatc agttgaagaa
     8221 agcgaatcac ataatatgag tatggcactt gcccaaaaac ttgccgccga cagcattgcg
     8281 gcggttgccg aaggacgcaa ccttcaggac gtgttggcgc aaatccgcac cgcgcatccc
     8341 gaccttacgg cacaggaaaa cggcgcgttg caggacatcg cctacggctg ccagcgttat
     8401 ttgggcagtt tgaaacatat gctcgcgcag atgctgaaaa agccgattga caacccgcag
     8461 ctcgaaagcc tgcttttggc ggcgttgtac caactgcatt acacgcgcaa cgcgccgcac
     8521 gccgtggtca acgaagcggt ggaaagcata gccaaaatcg gacgcgggca gtaccgttcg
     8581 tttgccaacg cgattttgcg ccgctttttg cgcgaacgcg acaagcttgc ggcttcctgt
     8641 aaaaaagacg atgtggcgaa acacaacctg ccgctgtggt gggtggctta cctgaaaaac
     8701 cattatccga aacactggca caacatcacc gccgcgctac aatcccatcc gccgatgacg
     8761 ttgcgcgtca accgccgaca cggcaatgcc gaaagctatt tggaaaaact ggctgcggaa
     8821 ggtattccgg ccagggcgtt ggacgaatat gcggttacgt tggaagaagc cgtgccggta
     8881 aaccgtctgc ccggtttttc agacggcatt gtttcggtac aggacttcgg tgcgcagcag
     8941 gcggcgtatc ttcttaaccc gaaagacggc gaacggattt tggacgcgtg cgccgcgccg
     9001 ggcggcaaga cggggcatat cttggaactg gcggattgcc gcgttaccgc cttggacatc
     9061 gatgcaggcc gtctgaagcg tgtggaggac aatatcgccc gtttgggctt tcagacggca
     9121 tcggcggcgt gtgccgatgc gcgggatttg gcggcgtggt atgatggaaa gcctttcgac
     9181 gcaatccttg ccgacgtgcc atgcaccgct tccggcgtgg cgcggcgcaa tcccgacgtg
     9241 aaatggctgc gccgtccgac cgacgcgctc aaaaccgccc gccagcagga agccctgctg
     9301 gacgcacttt ggcagacgct gaaacagggc ggcagaatgc tgcttgccac ctgttccgtg
     9361 ttcgtcgaag aaaacgacgg gcaattgcaa aaattcctca accgccatgc cgatgccgaa
     9421 ccgatcgaat cgcgggtgct tttaccgaac aaacaccaag atggctttta ttacgcgctt
     9481 attcaaaagc attaaacaat ggcttgtgct gctgccgatg ctttccgttt tgccggacgc
     9541 ggcggcggag gggatagatg tgagccgcgc cgaagcgagg ataaccgacg gcgggcagct
     9601 ttccatcagc agccgcttcc aaaccgagct gcccgaccag ctccaacagg cgttgcgccg
     9661 gggcgtgccg ctcaacttta ccttaagctg gcagctttcc gccccgataa tcgcttctta
     9721 tcggtttaaa ttggggcaac tgattggcga tgacgacaat attgactaca aactgagttt
     9781 ccatccgctg accaaccgct accgcgttac cgtcggcgcg ttttcgacag actacgacac
     9841 cttggatgcg gcattgcgcg cgaccggcgc ggttgccaac tggaaagtcc tgaacaaagg
     9901 cgcgctgtcc ggtgcggaag caggggaaac caaggcggaa atccgcctga cgctgtccac
     9961 ttcaaaactg cccaagccat ttcaaatcaa tgcattgact tctcaaaact ggcatttgga
    10021 ttcgggttgg aaacctctaa acatcatcgg gaacaaataa tgcgccgttt tctaccgatc
    10081 gcagccatat gcgccgtcgt cctgttgtac ggactgacgg cggcaaccgg cagcaccagt
    10141 tcgctggcgg attatttctg gtggatagtt gcgttcagcg caatgctgct gctggtgttg
    10201 tccgccgttt tggcacgtta tgtcatattg ctgttgaaag acaggcgcga cggcgtattc
    10261 ggttcgcaga ttgccaaacg cctttctggg atgtttacgc tggttgccgt actgcccggc
    10321 gtgtttctgt tcggcgtttc cgcacagttc atcaacggta cgattaattc gtggttcggc
    10381 aacgataccc acgaggcgct tgaacgcagc ctcaatttga gcaagtccgc attgaatctg
    10441 gcggcagaca acgcccttgg caacgccatc cccgtgcaga tagacctcat cagcaccgcc
    10501 tccctatccg gcaatatggg cagggtgctg gaacattatg ccaacgggtt tacacagttg
    10561 tccctttaca atgccgcaag cggcaaaatc gaaaaaagca tcaacccgca caagctcgat
    10621 cagccgtttc cggataaggc gcgttgggaa aaaatccaac aggcgggttc ggtcagggat
    10681 ttggaaagca taggcggcgt attgtacgcg cagggctggc tgtcggcggg tacgcacaac
    10741 gggcgcgatt acgccttgtt tttccgtcag ccggttccca aaggcgtggc agaggatgcc
    10801 gtcttaatcg aaaaggcaag ggcgaaatat gctgagttga gttacagcaa aaaaggtttg
    10861 cagacctttt tcctggcaac cctgctgatt gcctcgctgc tgtcgatttt tcttgcactg
    10921 gtcatggcac tgtatttcgc ccgccgtttc gtcgaacccg tcctatcgct tgccgagggg
    10981 gcaaaggcgg tggcgcaagg cgatttcagc cagacgcgcc ccgtgttgcg caacgacgag
    11041 ttcggacgct tgaccaagtt gttcaaccac atgaccgagc agctttccat cgccaaagaa
    11101 gcagacgagc gcaaccgcca gcgcgaggaa gccgccagac attatcttga atgcgtgttg
    11161 gaggggctga ccacgggcgt ggtggtgttt gacgaacaag gctgtctgaa aaccttcaac
    11221 aaagcggcgg aacagatttt ggggatgccg cttacccccc tgtggggcag cagccggcac
    11281 ggttggcacg gcgtttcggc gcagcagtcc ctgcttgccg aagtgtttgc cgccatcggc
    11341 gcggcggcag gtacggacaa accggtccat gtgaaatatg ccgcgccgga cgatgccaaa
    11401 atcctgctgg gcaaggcaac cgtcctgccc gaagacaacg gcaacggcgt ggtaatggtg
    11461 attgacgaca tcaccgtttt gatacacgcg caaaaagaag ccgcgtgggg cgaagtggcc
    11521 aaacggctgg cacacgaaat ccgcaatccg ctcacgccca tccagctttc cgccgaacgg
    11581 ctggcgtgga aattgggcgg gaagctggat gagcaggatg cgcaaatcct gacgcgttcg
    11641 accgacacca tcgtcaaaca ggtggcggca ttgaaggaaa tggtcgaagc attccgcaat
    11701 tatgcgcgtt ccccttcgct caaattggaa aatcaggatt tgaacgcctt aatcggcgat
    11761 gtgttggcat tgtatgaagc cggtccgtgc cggtttgcgg cggagcttgc cggcgaaccg
    11821 ctgatggtgg cggcggatac gaccgccatg cggcaggtgc tgcacaatat tttcaaaaat
    11881 gccgccgaag cggcggaaga agccgatgta cccgaagtca gggtaaaatc ggaagcgggg
    11941 caggacggtc ggattgtcct gacggtttgc gacaacggca aagggttcgg caaggaaatg
    12001 ctgcacaacg ccttcgagcc gtatgtaacg gacaaaccgg cgggaacggg attgggtctg
    12061 cctgtggtga aaaaaatcat tgaagaacac ggcggccgca tcagcctgag caatcaggat
    12121 gcgggtggcg cgtgtgtcag aatcatcttg ccaaaaacgg taaaaactta tgcgtagcag
    12181 cgatatttta attgtagacg acgaaatcgg catccgcgac ctgctgtcgg aaatcctgca
    12241 ggacgaaggt tattcggtcg cattggcgga aaacgccgaa gaggcgcgca agctgcgcca
    12301 tcaggtacgc ccggcgatgg tgttgctgga tatttggatg cccgattgcg acggcatcac
    12361 ccttttgaag gagtgggcga aaaacgggca gctcaatatg ccggtggtga tgatgagcgg
    12421 gcatgccagc atcgataccg ccgtagaagc gaccaaaatc ggcgcgctcg actttttgga
    12481 aaaaccgatt tccctgcaaa agctgctgtc tgccgtcgaa aacgcgttga aacacggtgc
    12541 ggcgaaaatc gaaacggggc ctgtattcga caagctgggc aacagtgcgg cgattcagga
    12601 gatgaactgc gaagtcgaag cggcggcaaa gcgcacgtcc cctgtatttt tgacgggcga
    12661 agcgggttcg ccgtttgaaa ccgtggcgcg ctatttccat aaaaacggta cgccgtgggt
    12721 cagtccggca agggtcgaat atctgatcga tatgccgatg gaactgttgc agaaggcgga
    12781 gggcggcgtt ttgtatgtcg gcgacatcgc ccaatacagc cgcaatatcc aaaccggcat
    12841 tgcctttatc atcggcaagg cagaacgctg ccgcgtcagg gtggtcgcat cgggcagcag
    12901 ggcggcaggt tcagacggca ttgcctgcga ggaaaagctg gcggaactgc tgtcggaatc
    12961 ggtcgtccgt attccgccgc tgcgtatgca gcatgaagat attcccttcc tgatacaggg
    13021 gattgcctgc aatgtggcgg aaagccaaaa gattgcgcct gcctcattca gtgaagaggc
    13081 acttgccgca ttgacccgtt acgactggcc gggaaatttc gaccaactgc aaagcgtcgt
    13141 tgcaacgctg ttgttggagg cggacggaca ggaaatcggc gcggcggcgg tttcttccct
    13201 tttggggcag aatgtgcctg ccgagggagc ggaagatatg gtgggcgggt ttaatttcaa
    13261 cctgcccctg cgcgaattga gggaggaggt ggagcggcgt tatttcgagt accacatcgc
    13321 ccaagaaggt cagaatatga gcaaagtggc gcagaaggtc ggtttggaac gcacgcacct
    13381 ttaccgcaaa ctcaaacagc tcggcatcgg cgtttcgcgc cgggcggggg aaaaaaccga
    13441 agaataggcc cggacggccg gttttccggc tgcgggcttt tgttttcaga cggcatttgg
    13501 tgcaaatgcc gtctgaaatc gtaaggggac ggattttatg acagaggacg aacgtttcgc
    13561 gtggctgcaa ttggcgttta cgccctatat cggcgcggaa agcttcctgc tgctgctgcg
    13621 ccgtttcggc agcgcgtcaa acgccctgtc cgcaccggcg gaacaggtcg ccctggcggt
    13681 gcggcacaag caggcggccg aggcttggcg caatgcggaa aaacgcgcct cggcgcggca
    13741 ggcggcagaa gcggcgttgg aatgggaaat gcgggacgga tgccgtctga tgctgcttca
    13801 ggatgaagat ttccccgaaa tgctgacgca ggggctgacc gcgccgccgg ttttgttttt
    13861 gcgcggcaac gtgcggctgc tgcacaagcc ttccgccgcc atcgtcggca gccgccatgc
    13921 cacgccgcag gcgatgcgga ttgccaaaga tttcggcagg gcgttgggtg ggaaaggcat
    13981 tcccgtcgtg tcgggtatgg cttcgggcat cgacaccgcc gcccatcagg gcgcgttgca
    14041 ggcagaaggc ggcaccatcg ccgtgtgggg gacgggcata gaccgcattt atccgccgtc
    14101 caataaaaac cttgcttatg aaattgccga aaggggattg attgtcagcg agttcccttt
    14161 ggacacgcgt ccgtttgcag gcaactttcc gcgccgcaac cgcctgattg ccgcactgtc
    14221 gcaagtaacg ctggtggtcg aggccgcctt ggaatccggt tcgctgatta ccgccggttt
    14281 ggcggcagaa atggggcgcg aggtaatggc ggtacccggt tcgatagaca acccgcacag
    14341 caaaggctgc cacaaactga ttaaagacgg cgcgaaactg acggaatgcc tggacgacat
    14401 cctgaacgaa tgcccgcggc tcttgcaaaa tgagggtgct tcgtcatatt ctataaataa
    14461 gggaatgcct gaaaagcgca tcactgccgt tcagacggca tccgaccagc tgtctctgcc
    14521 tgaaggcaaa atgccgtctg aaaagacgga gaaccgaccc gtcggcggca gtatcttgga
    14581 caggatgggt ttcgacccag ttcatcccga cgtgcttgcc ggacagttgg ctatgcctgc
    14641 cgcagatttg tatgccgcac tgttggaatt ggaattggac ggcagcgttg ccgcaatgcc
    14701 cggcggcaga taccagcgta tccgaacttg aacgcacttt atattaagga acacgaatga
    14761 ccgaagtcat cgcctacctc atcgaacatt tccaagattt cgatacctgt ccgccgcccg
    14821 aagacttggg tatgctgctt gaagaagcgg gtttcgatac gatggaaatc ggcaacaccc
    14881 tgatgatgat ggaagtattg ctcaacagct ccgaattttc cgccgaaccc gccgacagcg
    14941 gcgcattgcg cgtgtacagc aaagaagaaa ccgacaacct gccgcaggaa gtgatggggc
    15001 tgatgcagta tctgattgaa gaaaaagccg tcagctgcga acagcgggaa atcatcatcc
    15061 acgcgctcat gcacattccg ggcgacgaaa ttaccgtaga taccgccaaa gtgctgaccc
    15121 tgctgctttt atgggcaaac aagagcgagc tgcccgtgtt ggtcggcgac gagctgatga
    15181 gcgcgctttt actcgacaac aaacccacga tgaactgaag cggcttcaga cggcccgccc
    15241 gaggccgtct gaaacgccgg catcaaaacc accatccaga gaacgacaaa tggcgaaaaa
    15301 cctattaatc gtcgaatccc cgtccaaagc caaaaccctg aaaaaatatt tgggcggcga
    15361 ttttgaaatc cttgcatcct acggacacgt ccgcgacctc gtccccaaaa gcggcgcggt
    15421 cgatcccgac aacggctttg cgatgaaata ccaactcatc agccgcaacg gcaaacacgt
    15481 cgatgccatc gtcgccggtg ccaaagaagc tgaaaacatc tacctcgcca ccgacccgga
    15541 tagggaaggc gaagccattt cctggcatct tttggaaatc ctcaaatcca aacgcggctt
    15601 gaaaaacatc aagccgcagc gtgtcgtgtt ccacgaaatc accaaaaacg ccgtgctcga
    15661 tgccgttgcc catccgcgcg aaatcgaaat ggacttggtc gatgcgcaac aagcccgccg
    15721 tgctttggac tatttggtcg gctttaacct ttcgccattg ttatggaaaa aaatccgccg
    15781 aggtttgagc gcggggcgtg tgcaaagccc tgctttgcgc ctgatttgtg agcgcgaaaa
    15841 cgagatccgc gcgtttgaag cgcaggaata ttggacggta catcttgaca gtcacaaagg
    15901 acgcagcaag ttcaccgcca aactcgccca atacaacggc gcgaaactcg aacaattcga
    15961 cctgccgaac gaagccgcgc aagccgacgt gttgaaagaa ctcgaaggca aagaggccgt
    16021 cgttaccgcc attgaaaaga aaaagcgcag ccgcaatcct gccgcgccgt tcaccacttc
    16081 taccatgcag caggatgccg tgcgcaaact cggcttcacc accgaccgca ccatgcgtac
    16141 cgcccaacag ctttatgaag gtatagacgt agggcagggc gcgatcggtc tgattaccta
    16201 tatgcgtact gacagcgtga atttggcgga tgaagcgtta accgaaatcc gccattacat
    16261 cgaaaacaaa atcggcaaag aatatctgcc gagtgccgcc aaacaataca aaaccaaatc
    16321 caaaaacgcc caagaagcgc acgaagccat ccgtccgact tccgtgtacc gcacgcccga
    16381 aagcgtcaaa cccttcctga gcgcagacca gttcaaactc tatcaaatga tttggcagcg
    16441 taccgtcgcc tgtcagatga cgcctgccaa attcgaccaa accaccgtcg atattaccgt
    16501 cggcaaaggc gtattccgcg taaccggaca agtgcaaacc ttcgcaggct tcttgagcgt
    16561 ttatgaagaa agcagcgacg atgaagaagg cgaagacagc aaaaaactgc ccgaaatgag
    16621 cgaaggcgat aaattgcccg tggacaaact ctacggcgaa caacacttta ccactccgcc
    16681 gccacgctac aacgaagcca cgctggttaa agccctcgaa gaatacggca tcggccgccc
    16741 ctcgacctac gccagcatca tctccacgct caaagaccgc gaatacgtta cccttgagca
    16801 aaaacgcttc atgcccaccg acacaggcga catcgtcaac aaattcctga ccgaacactt
    16861 cgcccaatac gtcgattacc actttaccgc caaactcgaa gaccagcttg acgaaatcgc
    16921 cggcggcaaa cgccaatgga ttcccttgat ggacaaattc tggaaaccgt tcatcaaaca
    16981 agtggaagaa aaagaaggca tcgaacgcgc caaatttacc acgcaggaac ttgatgaaac
    17041 ctgcccgaaa tgcggcgaac acaaactgca aatcaagttc ggcaaaatgg gccgtttcgt
    17101 tgcgtgtgcc ggctatcccg agtgcagcta cacgcgcaat gtcaatgaaa ccgccgaaga
    17161 agccgcagag cgcatcgcca aagccgaagc cgaacaggca gaactcgacg gacgcgaatg
    17221 tcctaaatgt ggtggacggc tggtgtacaa atacagccgt accggcagta aattcatcgg
    17281 ttgcgccaac taccccaaat gcaaacacgt cgagccgctg gaaaaaccga aagataccgg
    17341 cgtccagtgt ccgcaatgta aaaaaggcaa cctcgtcgag cgtaaatccc gctacggcaa
    17401 actgttttac agttgcagca cctatcccga ctgtaactac gccacatgga acccacccgt
    17461 tgcagaaagc tgtccaaaat gcgcatggcc ggttttgacc atcaaaacca ccaaacgctg
    17521 gggtgtagaa aaagtctgcc cacaaaaaga atgcggctgg aaagaacaga ttgaaccgcc
    17581 cgcgccgaag gagtaagatt aggttggttt gaaagagaaa aggtcgtctg aaaaattttc
    17641 agacgacctt tgcttttctg tgattggttt atttgaatcc gcgtgttgtt ttaaagtccg
    17701 ataaaatccg gttcatttca ggcgcaaaca aggcgatgta atcgtaagat agaccgcgac
    17761 tggcactggg atggggaaag cagacgactt cgcaatcttc aaacgattgg aatttgacat
    17821 tgaaacgtgt accgtcaaat tctttttgca ccgtctccag cggtttggtc tgcttaccga
    17881 ccaactgctc gaagcgtggc agtacatttt ggttgttcag aaaatccgcc aacctgctgc
    17941 ccatgaagag gatgactttc ggacgcagtt tttcgatgtg gtagagaaaa ttatcgatgt
    18001 gctcgggttg tgtgaacttg tctggattgt cgatagtgtt gccctgtgta gcagcccagt
    18061 tggtttgaac cagggatttt tcaaatgcac cgcccaatcc attttcgtct aaggggtgtc
    18121 cccacatttc aaaccaattt tttatcgtat tatcgtaacg ccactttttt gcctgctctc
    18181 cgaaatagag ggatttgttt gcaaatgtat ggtcgatttt gttttcaggg agtttgtatt
    18241 cacctgctac ataagcagcc tcatcggctt tactccaacc ccattcatag ccacaaatca
    18301 ttaagccatg tttgtcgttg tagcctttga acaggctgtt gctcaaattc aaatccttca
    18361 tcatgaactc ttccttttaa aatttaagag cgattgactt caatgttttt agatggggtg
    18421 gaaaaatcct tgtgtaggca acataaattc aataaatttc ttgataattc gaaacctact
    18481 aatagcgcac ctataaaagc tttttcatta cgttcagcat gacggtcacg tcgttcatat
    18541 tttttacgct tgctgttccc tgttattaca gctaagccaa gtgatatggc gagaattgcc
    18601 caaacaatag tacttaaata acaattttcc ccatactatc aataaggaaa gaaaaaacct
    18661 tttagtatta ggtcgataga ttataatcca tgcccatgaa aatgcaataa gagttataca
    18721 taagatacaa gctgacagga tttctttatt tttaattaaa taacttagag cgatgaggat
    18781 gacaggtgtc aagaaaataa tagttacatc ccgatagcta taaaagaaaa ctgccctatt
    18841 ttgaatgtgg agatgtgcac agaatccaat atagctaagg ataatagtta atataataaa
    18901 aaaagaccac caagggtgaa gagataggaa ttccatgttt tccctttttt tgtaaaaagg
    18961 aaaaaatctt atctaatagt taattgccta accagccaga agaagtttaa aatctatccc
    19021 aataattcaa ccatctatac agaaagttca gcttatggaa acccacgaaa aaatccgcct
    19081 gatgcgcgaa ttgaataaat ggtcccagga ggatatggcg gaaaagctgg cgatgtcggc
    19141 aggagggtat gccaaaatcg aacggggcga aacgcagttg aatgtcccgc gtttggagca
    19201 gttggctcag attttcaaaa tcgatatgtg ggacttgctc aaatcgggcg gtggtgggat
    19261 ggtgtttcag attaatgaag gtgatagtgg tggcgatatt gcgttgtatg cgtcgggtga
    19321 tgtttcgatg aaaatagaat ttttaaaaat ggagttgaaa cactgcaaag aaatgttgga
    19381 acaaaaagac aaagaaatcg agctgctccg caagctgacc gaaaccgttt aaacagatat
    19441 gccgtctgaa aaaagttttc agacggcata ttctttgaca ggtcttgtat aataccgttt
    19501 gaacttacag gtttttgatt atggcggcag gcaaacatac caaacacagc aaccgggtac
    19561 gcattatcgg cgggcaatgc cggggcagga aattgagttt cacatccgcc gacggactgc
    19621 gtccgacacc cgacagcgtg cgtgaaaagc tgtttaactg gctgggacag gatttgacgg
    19681 gtaaaacggt tttggatctc ttcggaggca gcggcgcact cggtatagaa gccgcttcgc
    19741 gcaacgccaa acgcgtgctg atttcggata acaaccgcca aaccgtgcag accttgcaga
    19801 aaaacagtcg cgaactgggt ttggggcagg tgcaaatcgt ctgttcagac ggcatcgcat
    19861 atttgaagac cgtatccgaa cagtttgatg ttgtctttct cgacccgccg tttgcatggc
    19921 aggactggca aatcctgttt gatgccttga agccgtgcct gaacccccga gcattcgtct
    19981 atctcgaggc gggtacgctg ccggatattc ccgattggct gacggaatat agagaaggga
    20041 aatcggggca gagtacattc gaattaaggg ttttccaagt ggctgaataa tatgcgcttt
    20101 gataatcatt tccgagttgt aaacattcgt ttgcaaccgt ccggttcaaa aaaaccttgt
    20161 gctataatcc gcgcccgccc ggttttgata atttagtgga aaaggaaaag aaatgtcgct
    20221 ttttattacc gacgagtgca tcaactgcga cgtatgcgaa cccgaatgcc ccaatgatgc
    20281 catttcccaa ggcgaggaaa tttacgaaat caaccccaac ctctgcacgc agtgcgtcgg
    20341 acactacgat gagccgcagt gccagcaggt ttgcccggtg gactgcatcc tgattgacga
    20401 agaacatccc gaaacccatg acgagttgat ggcgaaatac gaaaagatta tccagtttaa
    20461 ataaattctt tttaaaacat caaattatgt ctgttttgaa ataaaatcaa aaaaaaactt
    20521 gacggaaaag caagccgcta ataaactaac gttctctttt ggagggattc ccgagcggtc
    20581 aaagggggca gactgtaaat ctgttgcgaa agcttcgaag gttcgaatcc ttctccctcc
    20641 accaaaattc ttacttgggg cagtagcgag taatgcgggt gtagctcaat ggtagagcag
    20701 aagccttcca agcttacggt gagggttcga ttcccttcac ccgctccaaa caattaggcc
    20761 catgtagctc aggggtagag cactcccttg gtaagggaga ggtcggcagt tcaaatctgc
    20821 ccatgggcac catctctcga ttattcattt ctttaaggct tagatatata ggatattg
//
LOCUS       DAXHKG010000020        20679 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.020, whole genome shotgun sequence.
ACCESSION   DAXHKG010000020 DAXHKG010000000
VERSION     DAXHKG010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20679
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.020"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(64..3669)
                     /gene="putA"
                     /locus_tag="ACFMWP_000580"
     CDS             complement(64..3669)
                     /gene="putA"
                     /locus_tag="ACFMWP_000580"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HFC5891223.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDKQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHCRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDCLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDTKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRNDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     SVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
     gene            3661..3828
                     /locus_tag="ACFMWP_000581"
     CDS             3661..3828
                     /locus_tag="ACFMWP_000581"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891224.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            complement(3918..5444)
                     /gene="putP"
                     /locus_tag="ACFMWP_000582"
     CDS             complement(3918..5444)
                     /gene="putP"
                     /locus_tag="ACFMWP_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HFC5891225.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            5927..6247
                     /locus_tag="ACFMWP_000583"
     CDS             5927..6247
                     /locus_tag="ACFMWP_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HFC5891226.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            6261..7757
                     /locus_tag="ACFMWP_000584"
     CDS             6261..7757
                     /locus_tag="ACFMWP_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HFC5891227.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQACIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            7863..8708
                     /gene="ftsN"
                     /locus_tag="ACFMWP_000585"
     CDS             7863..8708
                     /gene="ftsN"
                     /locus_tag="ACFMWP_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC5891228.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPA
                     SSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKADEVEEK
                     AGEPEREKSDGQAVRKKVLTEEREQTVREKAQKKDAETVKKQAVKPSKETEKKAPKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMGAYADRR
                     SAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            8711..9355
                     /locus_tag="ACFMWP_000586"
     CDS             8711..9355
                     /locus_tag="ACFMWP_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC5891229.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVKLSGL
                     KYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
                     LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            9388..10209
                     /locus_tag="ACFMWP_000587"
     CDS             9388..10209
                     /locus_tag="ACFMWP_000587"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HFC5891230.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEITIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIVDVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFVAAFVSGLVAVKALLRFVSKKNYIPFAYYRIVFGIAIIILWLSGWISWE"
     gene            complement(10491..10566)
                     /locus_tag="ACFMWP_000588"
     tRNA            complement(10491..10566)
                     /locus_tag="ACFMWP_000588"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10531..10533),aa:Ala,seq:ggc)
     gene            complement(10574..10650)
                     /locus_tag="ACFMWP_000589"
     tRNA            complement(10574..10650)
                     /locus_tag="ACFMWP_000589"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10614..10616),aa:Met,seq:cat)
     gene            complement(10782..11972)
                     /locus_tag="ACFMWP_000590"
     CDS             complement(10782..11972)
                     /locus_tag="ACFMWP_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC5891231.1"
                     /translation="MSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLIAEEIGKHGN
                     WIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLARQLQELLSQT
                     AGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQARAPEASQKVV
                     HLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTYSARPLHDLQ
                     LSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRN
                     QGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQSHFLLNL
                     GITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVDWAGFRFGDI
                     CHKL"
     gene            12278..12733
                     /gene="mraZ"
                     /locus_tag="ACFMWP_000591"
     CDS             12278..12733
                     /gene="mraZ"
                     /locus_tag="ACFMWP_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HFC5891232.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            12730..13716
                     /gene="rsmH"
                     /locus_tag="ACFMWP_000592"
     CDS             12730..13716
                     /gene="rsmH"
                     /locus_tag="ACFMWP_000592"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HFC5891233.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQAALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            13713..13976
                     /gene="ftsL"
                     /locus_tag="ACFMWP_000593"
     CDS             13713..13976
                     /gene="ftsL"
                     /locus_tag="ACFMWP_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HFC5891234.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVEHQR"
     gene            14037..15782
                     /locus_tag="ACFMWP_000594"
     CDS             14037..15782
                     /locus_tag="ACFMWP_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HFC5891235.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            15807..17285
                     /locus_tag="ACFMWP_000595"
     CDS             15807..17285
                     /locus_tag="ACFMWP_000595"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HFC5891236.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKFWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVPFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDGYGAELIGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFRTPWGEGKCRTRLLGRFNAQNLAACIALLCANDYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAVRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            17308..18954
                     /locus_tag="ACFMWP_000596"
     CDS             17308..18954
                     /locus_tag="ACFMWP_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC5891237.1"
                     /translation="MKQSARIKNMNQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            19080..20438
                     /gene="murF"
                     /locus_tag="ACFMWP_000597"
     CDS             19080..20438
                     /gene="murF"
                     /locus_tag="ACFMWP_000597"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HFC5891238.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKAWRENVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNALRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGVDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALALAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            20441..20617
                     /locus_tag="ACFMWP_000598"
     CDS             20441..20617
                     /locus_tag="ACFMWP_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891239.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
BASE COUNT         4792 a         5057 c         5996 g         4834 t
ORIGIN      
        1 tgccgtctga aaggttttca gacggcattg gttcacggcc cgcgcccggg gatttcggta
       61 aaatcagtcg gcgaccgcca tcaggctggc gttgccgccg gcggctgtgg tgttgacgct
      121 gcaagagatt tcttcaaaca cttgcaggat gtcgagtccg ttttccgaag ggaggatgcg
      181 gatgagtgcg ccgtcgtggg cggcaagttc ctgtttgcgc gcgctgtcca aaggcgacag
      241 ggcggcaacg tggctgatgt cggcggtttc gggtttgccg ttgaccagca gcagaccttc
      301 caagtcggcg gtgtaggaag ccagcgggct gtcgggttcg accactgcct gtacgccgga
      361 ggcggcaagt tcggttaggg cgcagaaggc ttgcaggagg ctgccgccgt gtatccaaac
      421 gcgtttgggc gcgtgccatg agatgctgtt gcgctcgccg gtcggtccgg taaggacggt
      481 ttcggcacgg cgcagggtgc ggatgcgggc gtgtcccaaa gcggccgctg cggctttttt
      541 ctcttcggcg ttgaacggta gtttgtgaac cagtgcttcg aggcgtttga gtgcggcttc
      601 gtccgcctgt ccgatttggc tcagggtcgg ggcaacccat tcgccggcgc gggtcagttt
      661 ttgcaggtag aatgaaccgc ctgctttggg acctgtgccg gacagaccgt gtccgccgaa
      721 gggctgtacg ccgacgactg cgccgacgat gttgcggttg acgtaaacgt tgccggcttc
      781 gatgcggctg cggatgtggc gtaccgtgcc ttcgatgcgg ctgtgtacgc cgtgggtcag
      841 ggcgtagcct ttgctgttga tttggtcgat gacgctgtcg agttcgtcgg cgcggtagcg
      901 gacgacgtgc aggacgggac cgaagacttc gcgttgcagt tcgttgaggt tgttcaattc
      961 aaacaggatg gggcggacga acgtggattt ttcggaatcg acatcggcag cggttttgac
     1021 ttcgtggtaa gacttggcaa cgcctttcat tttgttgatg tggttcaaca ggttttgctg
     1081 cgcttcggca tcgatgacgg agccgacatc ggtggtgagt tgaatcggtt tgccgacgac
     1141 gagttcgtcc atcgcgcctt tgatcatgtc gagcatacgg tcggcaacgt cttcttggac
     1201 gcacaagata cgcagggcgg agcagcgttg tcccgcgctg tcgaaggcgg agttcaatac
     1261 gtcggcgcag acttgttcgg caagtgcggt ggaatcgaca atcatggcgt tttgtccgcc
     1321 ggtttcggca atcaggacgg gattgtcgtt gcgtttggca agggctttgt tgatcaggcg
     1381 cgccacttcg gtcgagccgg tgaaaattac gccgccgatg cgggcatcgt tggtcaatgc
     1441 cgcacccacg tcgcctgcgc cgaggacgag ttgcagggcg gaagtcggga tgccggcttc
     1501 gtgcatgagg gaaacggcat aaccggcaat caggctggtt tgttcggcgg gtttggcgat
     1561 aacggtgttg cctgccgcca atgcggacac gacttcgccg gtaaagatgg cgagcgggaa
     1621 gttccacggg ctgatggcga caatcgcgcc gacggctttt gtgtcttgag gcagggtgtg
     1681 ttcggcttcg tttgcgtagt agcggcagaa atcgacggct tcgcgcactt cggcaatggc
     1741 gttgttcagc gttttgcccg cttcgcgcac ggcaagcatc attagcgcgg gggtgtgctg
     1801 ttcgagcagg tcggcgaaac ggcgcaggca ggcggcgcgt tcggcggcag gtgtcgcact
     1861 ccattcgggg aacgcggcaa cggctgcgcc aaccgcttct tgggcaagcg cggcatcggc
     1921 aaagctgact gtgccgacga tgtcgtcgtg gtcggcagga tttttaatcg gttgcgcttc
     1981 gccgacatcg cgggctttgc cgttgacgat ggatgcggcg tggaagtctt gtgcggcggc
     2041 tttgttcatc tgttcttgaa gctgctgcaa tacgttttcg ttgctcaagt ccacgccttg
     2101 cgagttcaga cggcatttgc cgtacaaatc gcgcggcagc ggcagggcgt tgtgcaggtg
     2161 gatgccttgt tcggcgatgg tgtcgaacgg gctcttaatc aggcagtcga tgctgatgtt
     2221 ttcatcgacg atttggttga cgaaagacga gttcgcgccg ttttccaaca ggcggcgcac
     2281 caagtaggcg agcagggttt cgtgtgtgcc gaccggggcg tacacgcgca cgcggcggcc
     2341 taagttttgc gggccgacga cttggtcgta cagggtttcg cccatgccgt gcaggcattg
     2401 gtgttcaaag tctttgcctt tgcccatttg gtagattgcg cctaaggtgt aggcgttgtg
     2461 cgtggcaaat tgcgggaata ccgcgtcttg cgcggaaagc agtttgcgcg cgcaggcgag
     2521 gtaggagatg tcggtgtgga ctttgcgggt gtaggtcgga tagccgttca agccgtccac
     2581 ttgcgcccat ttgatttcgc tgtcccaata cgcgcctttg acgaggcgga tcatcagttt
     2641 ttggttgttg cggcgggcta ggtcaatcag gtagtcgata acgaacggac aacgtttttg
     2701 gtaggcttgg acaacgaaac cgataccttt gtagccagcc aagtcagggt ctgaaaccaa
     2761 agcctccatc aaatccaaag acagctccaa gcggttggct tcttcggcat cgatgttgat
     2821 accgatatcg tattttttgc ccaaaaggaa cagctctttc aggcgcggca acagttcgcc
     2881 catcacgcgg cagtgttggg cgcgcgagta gcgcggatgg atggcggaga gtttgacgga
     2941 aatgccgttg ccttcgtaaa cgccttgtcc tgccgcatct ttgccgatgg cgtggatggc
     3001 ttcgacatag tcgcggtagt agcggtcggc atcggcttgg gtgtaggcgg cttcgcccaa
     3061 catatcgaag gagaagcggt agcccatttt ttcgcgttct ttgccgtttt gcagggcttc
     3121 ttcaatggtc tgtccggtga cgaactgttt gcccaacagg cgcatggcgt aattcacgcc
     3181 ttggcggatg agcggtgcgc cgcctttgct gatcaggcgg ctgagtgcgg aactcatttg
     3241 tttgtcgttt gtggcggtca gtttgccggt aatcagcagg ccccaggcgg cagcattgac
     3301 gaagagggaa gggctgttgt tcaaatggct tttccagttg ccgtctgaaa tcttgtcggc
     3361 aatcaggcgg tcgcgcgtgg cgttgtcggg gatacgcagc agggcttccg ccagacacat
     3421 cagtgcgatg ccttcttcgc tggagagtga gaattcgtgc atcagcgcat ccacgccgcc
     3481 ggctttggtg cggccggcgc ggacttgggt aaccaaacgg cgggcaagct cggaggcggc
     3541 gttgcgctct tcgtcgctca tctgtgcacg ttgcaacata tcctgtacgg cttcgatttc
     3601 attacggcgg taggcatcgg ttatcgcttg gcgcagggca gtttgtgccg gaaatgcaaa
     3661 atgaaacatt ttttggattc tccaaagttt ttcggggggc aggcggcatc ggtgcggcct
     3721 gaatacggta atatcgtaat aaatccgcag atgaaataca aggcttcaaa tgcgggcagg
     3781 gtaggtgctt ccgtttcttt gaaaatgaaa cgggtaaaac acaaataagg cctgtatgca
     3841 ggcaaggttt atttgtgttt gacccggaaa cgggttcaga cggcacgaac cgggatgccg
     3901 tgccgtctga aaggggttta tcgggcggcg cggtaatctg cgtcggcttt ttcaaagcgt
     3961 tcttgggttt cgcgcgaagg ttctttgttg aacagggaaa ccaatacggc gacgattaag
     4021 caaacaataa agcccgggac gatttcgtac atcgtcaaca agccgctttc gcctgccgct
     4081 tgagccggtt tttttaccca ttccgcccat acgactacgg ttaaggcacc tgcaaccata
     4141 cccgacaacg cgccgtaggc agtgatgcgt ttccacaata cggacagaat cacaatcggg
     4201 ccgaacgccg caccgaaacc tgcccacgca taagacacca gtcccaatac tttgctgttc
     4261 ggatcggaag caatcaggat ggaaatcacg gcaatcgcca agaccatcag gcggccgacc
     4321 cataccagtt ccgactgttg cgcgttttta cgcaaaaagc ctttgtagaa gtcttcggta
     4381 atcgcgctgg agcaaaccaa aagctggcag gacagggtgg acatcaccgc cgccaaaatc
     4441 gcgctcaaaa tgatgccggc gatccaaggg ttgaacagca gggtggaaag cgcgatgaag
     4501 atgcgttcgt ggttgccgct catagaagaa actttgtcgg gatttgcacc gaaatacgca
     4561 atgccgaaat aaccgaccgc caccgcgccc gcaaggcaca acgccatcca agtcatgccg
     4621 atgcggcgtg cggataccag cgatttcgcg ctttcggccg ccataaagcg cgccaaaatg
     4681 tgcggctgtc cgaaatagcc caagccccat gcggcggtgg aaatgatgcc gatgacggtc
     4741 gtaccggcaa acaggctgcc gtattctttg cccgtgcctg cggcgacgct ttgaatcgcg
     4801 gcagacatct gttccgcgcc gcccaagccc agatagacca tcaccggcgt taaaatcagg
     4861 gcgaaaatca tcaaagaagc ctgcagcgta tccgtccagc tgaccgccaa gaagccgccc
     4921 aagaaggtat aggcgatggt cgcgcccgcg cccagccaca ttgcctgatt gtaagtcata
     4981 ccttcaaaca ggctttggaa cagggttgcg cccgccacaa tgcccgaggc gcaataaatc
     5041 gtgaagaaga acaggataat cagtgcggaa accactttca tcaagtgtcc gcccgcgccg
     5101 aagcggtgga agaaataatc cggcagcgtc agcgcattgt tggcgtattc ggtatgcacg
     5161 cgcaggcggc ccgccaccaa gagccagttg aaatacgcgc cgaccaagag gccgatggca
     5221 atccaagcct cattcaaacc gctcaggtaa atcgcgcccg gcagacccat cagcagccag
     5281 ccggacatat cggacgcgcc tgccgacatc gcggtaacaa acgggcctag gctgcgcccg
     5341 cccaaaatat aatcgtcgaa attgcgcgta gaaaaatagg cggcaagccc gatgagaagg
     5401 actgcaacca gatagattgc aaaagtaatg tacatgggat tcatgtgcta ttcctcgtct
     5461 aaaacttcag aattacaggc tttgaaattg caagcaactt gcgcctgaaa tgtttttcta
     5521 ataaaagtac aacggaaaat ccggataccc gaaaggggga ttcggataaa ttatcttcaa
     5581 tcacaataag atatgtaata aaactatatg aaattgtaaa taatccgttt cagcataacc
     5641 caatttctgt tgtttgcaaa gcacttaatg gcttaaaaag ccgagtttga aacgatgcgc
     5701 gtcggaaaaa tcatttaaaa cagcatattg ttttgtagtg tcttgtaatc aggcgttgcg
     5761 cggaatatga aatccgtttt caggcggcag gtgttttgag gtgtaattta gcaaccgcaa
     5821 aggaggcgcg gtatgttttg ccgattatcc gccgcccgtt ttcagacggc atttttcctt
     5881 atacaatagc cgattgaatt tgatatgttc aggaaggata cagattatgt tcggcaagca
     5941 gctttttgag gaagtcggct cgaaaatcag cgaaaccatc gccaacagcc ctgccaaaga
     6001 tgtggaaaaa aatattaagg cgatgctggg cggcgcgttc aaccgtatgg atctggttac
     6061 gcgcgaagaa ttcgacatcc agcagcaggt tttaatcaaa acccgtacca aactggcggc
     6121 tttggaagcg cgtttggcaa aactcgaagc cgcgcaaaat cccgaacggg cagcattgga
     6181 agcggctgaa gccgctgccg aagaagccgt cgccgaaatc aggcagcaaa ccgaagccgg
     6241 cgaataaggc cgtctgaaat atgtcgcttg ccttggttta cagccgcgcc ttgagcggta
     6301 tgaatgcgcc gttggtcgaa gtggaagccc accttgccaa cggtctgccg catttcaaca
     6361 tcgtcgggct gcccgatacg gaagtcaaag aaagtcgcga ccgcgtccgt gccgccatta
     6421 ttcaaagcgg ttttgaattc cccgccaaaa aaatcaccgt caacctcgcc cccgccgacc
     6481 tgcccaaaga gtcggggcgt ttcgatttgc cgattgcaat cggcatcctt gccgcatcgg
     6541 ggcaggttgc gcccgaaaaa ctggcggaat acgagtttgc gggggaattg gcactgtcgg
     6601 ggctgttgcg ccccgtgcgc ggcgcgttgg cgatggcgtg gcagggtatg caggcaaaac
     6661 gtgcatttgt tttgcctgaa gaaaatgcag gacaagccgc cgtgatgcgc ggcattaccg
     6721 tttacggcgc gcgctctttg ggcgaagtcg ccgcccattt gaacggcatc gaacctttgg
     6781 cgcaaaccga atgccaagtt cctcagatgc cgtttgaaca tggcggacaa cctgatttgt
     6841 gcgatgtgaa aggtcagcac accgcgcgcc ttgctttgga aatcgctgcc gcaggcggac
     6901 acagcctctt gatgatgggt ccgccgggaa cgggcaagtc tatgctctcc caacggctgc
     6961 ccggcatcct gccgccgctg accgaagacg aattggtaga agtttgggca ttgcgttcgc
     7021 tcctgcccaa ccaccagcaa caactcgaca gcaaccgtcc tttccgcagt ccgcatcaca
     7081 gcgccagcgc ggcggctatg gtcggcggcg gttccgaccc gcgtccgggc gagatttcat
     7141 tggcgcacca cggcgtattg tttttggacg agctgcccga gttcgaccgc aaagttttgg
     7201 aagttttgcg cgaaccgttg gaaaacggcg aaatccacat ttcccgcgcg gcgcgccaag
     7261 ccgtctatcc tgccaaattc caacttgttg ccgccatgaa cccctgcccg tgcggttatc
     7321 tcgggcatcc cgtcaaaccc tgccgctgca cgcccgaaag cgtcgcgcgt taccgcagca
     7381 agatttccgg gccgctgctc gaccgcatcg atttgaccat cgaagtcccc agcctgtccg
     7441 ccgccgaact gatgcagcag gaagcgggcg aaagcagcgc gtccgttttg gaacgcgtta
     7501 tcgccgcccg cgacaaacaa tacgcacggc agggcaaagt caacgccgct ttgagcgtca
     7561 gcgaactcga ttcccaagcc tgcatccaaa aagaagcgca ggaagcattg ggcggcctgc
     7621 tggaaaaact ctccctttcc gcccgcagct tccaccgcat catgcgcgtg gcgcgtacat
     7681 tggcggattt ggctggcgac gaagaagtcg gcagaagcca cgtcatgaaa gccataggtt
     7741 tccgtcgtgc tttataggaa tgggaatgga agcaggtttt gcccaaatat ggcgatattg
     7801 ttagaatatc cgcccgtaag caaacggcgt taatgccgtc tgaaacacat taaggtatgt
     7861 ttatgaacaa attttcccaa tccggaaaag gtctgtccgg ttttttcttc ggtttgatac
     7921 tggcgacggt cattattgcc ggtattttgt tttatctgaa ccagagcggt caaaatgcgt
     7981 tcaaaatccc ggcttcgtcg aagcagcctg cagaaacgga aatcctgaaa ccgaaaaacc
     8041 agcctaagga agacatccaa cctgaaccgg ccgatcaaaa cgccttgtcc gaaccggatg
     8101 ctgcgacaga ggcagagcag tcggatgcgg aaaaagctgc cgataaagcc gacgaggttg
     8161 aagaaaaggc gggcgagccg gagcgggaaa agtcggacgg acaggcagtg cgtaagaaag
     8221 tgctgacgga agagcgtgaa caaaccgtca gagaaaaagc gcagaagaaa gatgccgaaa
     8281 cggttaaaaa acaagcggta aaaccgtcta aagaaacaga gaaaaaagct ccaaaagaag
     8341 agaaaaaggc ggaaaaggaa aaagttgcac ccaaaccgac cccggaacaa atcctcaaca
     8401 gcggcagcat cgaaaaagcg cgcagtgccg ccgccaaaga agtgcagaaa atgaaaacgt
     8461 ccgacaaggc ggaagcaacg cattatctgc aaatgggcgc gtatgccgac cgccggagcg
     8521 cggaagggca gcgtgccaaa ctggcaatct tgggcatatc ttccaaggtg gtcggctatc
     8581 aggcgggaca taaaacgctt taccgggtgc aaagcggcaa tatgtctgcc gatgcggtga
     8641 aaaaaatgca ggacgagttg aaaaaacatg aagtcgccag cctgatccgt tctatcgaaa
     8701 gtaaataatt atgaagctca aacatctgtt gccgctgctg ctgtcggcag tgttgtccgc
     8761 gcaggcatat gccctgacgg aaggggaaga ctatcttgtg ttggataaac ccattcctca
     8821 aaaacagtcg ggcaaaattg aggttttgga atttttcggc tatttctgcg tacattgcca
     8881 tcatttcgat cctttgttat tgaaattggg caaggcattg ccgtctgatg cctatttaag
     8941 gacggagcac gtggtctggc agcctgaaat gctcggtctg gcaagaatgg ctgctgcggt
     9001 caagctgtca ggtttgaaat atcaggcaaa ccctgccgtg tttaaagcag tttacgaaca
     9061 aaaaatccgc ttggaaaaca ggtcggttgc cgaaaaatgg gctttgtctc aaaaaggctt
     9121 tgacggcaaa aaactgatgc gcgcctacga ctctcctgcg gcagcggctg ctgcatcaaa
     9181 aatgcagcaa ttgacggaac agtaccgcat cgacagtacg ccgaccgttg tcgtcggcgg
     9241 aaaataccgc gttatcttca ataatggctt tgacggcggt gttcatacga ttaaagaatt
     9301 ggttgccaaa gtcagggaag aacgcaagcg tcagacccct gctgtacaga aatagccgaa
     9361 ctcccgtatc cgaaagaagc gcaagcaatg gattttctga ttgtcctgaa agccctgatg
     9421 atgggcttgg tagaaggttt taccgaattt ttaccgattt ccagcaccgg acatttgatt
     9481 gtgttcggca atctgattga ttttcacagc aatcacaagg tttttgaaat taccatccag
     9541 ctcggtgcgg ttttggcggt agtgtttgaa taccggcagc gtttcagcaa tgtgttgcat
     9601 ggcgtgggaa aagaccggaa agccaaccgt ttcgtcctta atcttgccat tgcttttata
     9661 cctgccgccg tgatggggct gttgttcggc aaacaaatca aagagtatct gtttaacccc
     9721 ttgagtgttg cagtcatgct ggttttgggc ggttttttta ttttgtgggt ggagaaacgc
     9781 caaagccggg cagagcctaa aattgtcgat gttgatgcat tgcgtccgat tgatgcgttg
     9841 atgatcggcg ttgcccaagt gtttgcactg gttccgggta cgtcccgttc gggcagtacg
     9901 attatgggcg ggatgctttg gggaatcgag cggaaaacgg caacggagtt ttcatttttc
     9961 ttggccgttc cgatgatggt tgcagcaacg gcttatgatg tcctgaagca ttaccggttt
    10021 ttcaccctgc atgatgtcgg tttgattctg attggctttg ttgccgcttt tgtttccggt
    10081 ttggtggcgg taaaagcgtt gctgaggttt gtttccaaga aaaattatat tccttttgcc
    10141 tattaccgca ttgtttttgg cattgccatc attatattgt ggctgtcagg ctggataagt
    10201 tgggaatgaa accataaacc cgacctgaag acattattcg ggtcgggttt gtttggcggg
    10261 ctgatatagt gaattaacaa aaatcaggac aaggcgacga agccgcagat agtacggcaa
    10321 ggcgagccaa cgctgtaccg gtttaaattt aattcactat aaaatcagga caggcggggc
    10381 gataggttta aagtcgattg cctgttttga aggcagtggt ttattcttta tttgctggca
    10441 atcaggcaat aaaaaagcac ataccttttt acggtctgtg cttttttatc tggtggaggt
    10501 aagcgggatc gaaccgctga cctcttgcat gccatgcaag cgctctacca actgagctat
    10561 acccccgaaa atttggtggc gaatcaggga ctcgaacccc ggacacaagg attatgattc
    10621 ctctgctcta accgactgag ctaattcgcc gtttcgtgaa gacgctatta tatgtttttc
    10681 tgtttttttg acaagccgta ttttttaatt ttgaattagt tgactgtttt taaatgttaa
    10741 aaagtttatg tcgtctgaag cggattcagg cggcatgagg gttagagttt gtggcagatg
    10801 tcgccgaagc ggaatcctgc ccagtcgacg ccgatatttt taccgaatgc gatgacttta
    10861 aacaattctc ccatttcatg ctggtcaatc agtttctgaa cggcagcagc ttcacggatg
    10921 taggcgggcg agtctgtttt tcccacttgt gccaacagtt cggttatgcc cagattcagc
    10981 agaaaatggg actggggcag atagcctgtc aaatccagtc ctgcatccgt accggcttgg
    11041 gcaatgtcgg taaagttgac atgcgcggtc aggtcggcca acccgatgaa gtcaaaagga
    11101 ttgtggataa cgtgatgtcg gtagtgtccg atcagagtac cttgattgcg ttgagggtgg
    11161 taatactgcg ctgcatcaaa accgtagtcg atgaatatca tacccccgcg ttcaagcctt
    11221 gaggcaaggg tgcggataaa ggcatattgt tgcggatgta gttcgctggt gtagggataa
    11281 tctgtttgag gaaaatagag ggaagccaag gcagatagct gtaagtcgtg cagcggtcgt
    11341 gccgaatagg taaaacggtc attatctagg caaacgccga catgctcgaa tgagccgcct
    11401 tcatttttac ggacgatttc gacaggcatg gcatcgagta cttcgttgcc gatgatgatg
    11461 ccgtcaaacg cttcgggaag tgcggtcaag tggacaactt tttgagatgc ttccggtgcg
    11521 cgtgcttgaa tcaggttttt ctgacgtgct gccagctccg gcgatatttc aataatatag
    11581 taacggctga tgccgtccga aatgctgccc aacaaatcgg cggcaagctg tccggttccc
    11641 gcgccgaatt catagatatt gcccgccgtt tgggatagaa gttcttgaag ttggcgtgcc
    11701 agtgtctgtg caaacagaga ggtgagggtc ggtgcggtaa taaaatcccc ggtattgccg
    11761 attttatggc tgccgccggt gtagtagccg tattgcggag cgtataaaac caattccata
    11821 aaacgtgaaa atggaatcca gttgccgtgt ttgccgattt cttcggcaat gagggtttgc
    11881 agtttgagcg agaattgccg tgcttcggga gaggggaggg ggaggggcat gataagtgtt
    11941 agcttgtgta aatttattgg atttcccgac atattacacg ttggtacggg tgctgtcatg
    12001 gctttatctt aatactatat attgtgttta tattattaaa ttaatcatat atagttgttt
    12061 attggttcga ttattctgta ccgcacccgc cgtgccgttg tcgtcatttt ttatcttatt
    12121 gtttttaaaa ggaataaaaa tttcagatat gttaatgagt tttcatgccc tgatttgacc
    12181 gagtgtttaa aatttcttat agtgtcgatt ggtggggaat tgtggggcaa agtgtctctt
    12241 ttacccttgt gattttgatt tcggcttggg acatgtcatg ttcggcggcg cacacgaatt
    12301 aagcatcgac agtaaggggc ggttggctgt tcctgccaaa ttccgtgaca ttctgtcgcg
    12361 cctctatacg cctgccgtag tggtaacgct cgagtcgaaa cacaagctgt tgatgtaccc
    12421 tgttgcggag tgggaaaagg ttgcggcgca acttttaaac ttaaaagtgg cggataaccc
    12481 tgttttgcgg cggtttcaaa atcttttgct gcataacgcg gaaattttgg aatgggacag
    12541 cgccggccgg gtgctgcttc ctgccggact gaggaaaagg gtggatttcg accgtgaagt
    12601 cgttttggtc ggtcgtgcca accgtttgga gctttggggt cgcgagcagt gggaggctga
    12661 gatggttcag gctttggatg acgatcctga cgaacttgcc ttccagttgg gtcagacgga
    12721 tttgcaattg tgagtggagc agaaagttac cggcatatca cggtcttgct gaatgaggcg
    12781 gtggatgcgc ttgccgtgcg cgaagacggt gtctatgtgg acggtacgtt cggcagggga
    12841 gggcattccc ggctgatttt gtcgcgtttg ggcgatgcgg ggcggttgat tgttttcgac
    12901 aaagaccctc aggcgattgc tgtggcagaa gagctggcgc gttcggacaa acgggtcggt
    12961 gtcgtgcatg gcggttttgc ttcgtttcag gcggcattgg acggtttggg tatcggcaag
    13021 gtggacggtg cgctgtttga tttggggatt tcgtctccgc aaatcgatga cggcagccgc
    13081 ggtttcagct tccgtttcga tgcccctttg gatatgcgta tggatacgac gcgcggtatg
    13141 tctgccgcag agtggatagc ggttgcgtcg gaacaggatt tgcacgaggt aatcaagaat
    13201 tatggtgaag agcggtttag ccgccagatt gcgcgcgcca ttgttgcgca acgggcggaa
    13261 agtccaatcg atacaacccg caagctggcg cagatcgtgg cacaaaacgt ccgtactcgc
    13321 gagcgggggc aggatcctgc gacgcgcacc ttccaggcgg tccgcatctt tattaaccgc
    13381 gagcttgaag aagtaggggc agtattgccg caggtcatgt gtcgtctgaa agagggcgga
    13441 cgtttggcgg tcattgcttt ccattcgttg gaagaccgca ttgtgaagca gtttgtcaaa
    13501 aaatattcgc aacacgcgcc cctgccgcgc tgggcggcgg tcagggaagc ggatttgccc
    13561 gagctgcccc tgaaaatcgt gggcagggca ttaaagccgg gtgaggcgga aattgccgcc
    13621 aatccgaggg cgagaagtgc ggttttgcgt gtggcggagc ggactgccgg tccgataccg
    13681 gaacaatcac agagaaaaac gtctgaatgg caatgaacaa attgaatttc cttctgctgc
    13741 ttgcggtgtg cgtttccgct ttttccgttg tgatgcagca aaaccagtac aggctcaact
    13801 tcacagcttt ggataaggcg aaaaaacagg aaatcgcctt ggagcaggat tatgcgcaaa
    13861 tgaggctgca acaggcgcgt ttggcgaacc acgaagcgat cagggcggcg gcagaaaaac
    13921 aaaacctcca tccgccggtt tcgggcaata cctttatggt ggagcatcaa agatagaagc
    13981 agcctgtgtg ccggaatcgg attcctgcgt caggataata ataacgagaa gtaaaaatgt
    14041 tgattaagag cgaatataag cctcggatgc tgcccaaaga agagcaggtc aaaaagccga
    14101 tgaccagtaa cggacggatc agcttcgtcc tgatggcaat agcggtcttg tttgccggtc
    14161 tgattgcccg cggactgtat ctgcagacgg taacgtataa ctttttgaaa gaacagggcg
    14221 acaaccggat tgtgcggact caaacattgc cggctacacg cggtacggtt tcggaccgga
    14281 acggtgcggt tttggcgttg agtgcgccga cggagtccct gtttgccgtg cctaaagaga
    14341 tgaaggaaat gccgtctgcc gcacaattgg aacgcctgtc cgagcttgtc gatgtgccgg
    14401 ttgatgtttt gaggaacaag ctcgaacaga aaggcaagtc gtttatctgg attaagcggc
    14461 agctcgatcc caaggttgcc gaagaggtca aagccttggg tttggaaaac tttgtatttg
    14521 aaaaagaatt aaaacgccat tacccgatgg gcaacctgtt tgcacacgtc atcggattta
    14581 ccgatattga cggcaaaggt caggaaggtt tggaactttc gcttgaagac agcctgcatg
    14641 gcgaagacgg cgcggaagtc gttttgcggg accggcaggg caatattgtg gacagcttgg
    14701 actccccgcg caataaagcc ccgaaaaacg gcaaagacat catcctttcc ctcgatcaga
    14761 ggattcagac cttggcctat gaagagttga acaaggcggt cgaataccat caggcaaaag
    14821 ccggaacggt ggtggttttg gatgcccgca cgggggaaat cctcgccttg gctaacacgc
    14881 ccgcctacga tcccaacagg cccggccggg cagacagcga acagcggcgc aaccgtgccg
    14941 taaccgatat gatcgaaccc ggttcggcaa tcaaaccgtt tgtgattgcg aaagcattgg
    15001 atgcgggcaa aaccgatttg aacgaacggc tgaatacgca gccttataaa atcggaccgt
    15061 ctcccgtgcg cgatacccat gtttacccct ctttggatgt gcgcggcatc atgcagaaat
    15121 cgtccaacgt cggcacaagc aaactgtctg cgcgtttcgg cgccgaagaa atgtatgact
    15181 tctatcatga gttgggcatc ggtgtgcgta tgcactcggg ctttccgggc gaaactgcag
    15241 gtttgttgag aaattggcgc aggtggcggc ctatcgaaca ggcgacgatg tctttcggtt
    15301 acggcctgca attgagcctg ctgcaattgg cgcgcgccta taccgcactg acgcacgacg
    15361 gcgttttgct gccggtcagc tttgaaaaac aggcggttgc gccgcaaggc aaacgcatat
    15421 tcaaagaatc gaccgcgcgc gaggtacgca atctgatggt ttccgtgacc gagccgggcg
    15481 gcaccggtac ggcgggtgcg gtggacggtt tcgatgtcgg cgcgaaaacc ggcacggcgc
    15541 gcaagttcgt caacgggcgt tatgccgaca acaaacacat cgctaccttt atcggttttg
    15601 cccccgccaa aaacccccgt gtgattgtgg cggtaaccat tgacgaaccg actgcccacg
    15661 gttattacgg cggcgtagtg gcagggccgc ccttcaaaaa aattatgggc ggcagcctga
    15721 acatcttggg catttccccg accaagccac tgaccgccgc agccgtcaaa acaccgtctt
    15781 aatccgagta tcaacgagat tgttttatgt tcagcaagtt aacccctttg gctgaaaccg
    15841 gcatcccgac cctgtcgtgt gcaaacgcag cagggcgttt gttgcattca gacagccgcc
    15901 aaatcaaaca aggcgatatt ttcgttgcct gtccgggcga atatgccgac ggccgcagtt
    15961 atatccccgc cgccgttgcc aacggcgcgg cttttgtttt ttgggacgac gacggcaaat
    16021 tcgcgtggaa tcccgaatgg aaagtcccca atcaaggcat caaagatttg aaacaccgtg
    16081 ccggcatatt ggcggcgcaa gtttacggca acgtttcaga cggtctcaaa ttctggggcg
    16141 taaccggaac caacggcaaa acctccatca cgcaatggct ggcgcaagct gccgatttgt
    16201 tgggcgaaaa aaccgccatt gtcggcacgg tcggcaacgg cttttggggt gcattggaag
    16261 aaaccacgca taccacaccc gcccccgtcg atgtccaaac cctgctctac cgtttccgtc
    16321 aacaaggcgc aacagccgcc gcgatggaag tctccagcca cggtcttgac cagtcgcgcg
    16381 tcaacggcgt gccattccgc agcgcaatct ttaccaatct cacccgagac cacctcgact
    16441 accacggcac gatggaagcc tatggcgcca tcaagtcgcg cctgttttac tggcatggct
    16501 tgaaacacgc cgttatcaat gtagatgacg gatacggcgc agaactcata ggccgtctga
    16561 aaaaagactg ccccgatttg gccgtttata gctacggctt cagcgaacac gccgacatcc
    16621 gcattaccga ctttaccgcc tcttcagacg gcatagaagc cgtattccga accccgtggg
    16681 gtgaagggaa atgccgcaca cgcctgctcg gacggttcaa cgcgcaaaac ctcgccgcct
    16741 gcatcgcctt gctgtgcgcc aacgactatc cgttggataa ggtattggat gtgctggcaa
    16801 aaatccgtcc cgcttcaggg cgcatggact gcatcatgaa cagcggcaag cccttggtcg
    16861 tcgtcgatta cgcccacacg cccgacgcat tggaaaaagc actcgccacc ttgcaggaaa
    16921 tcaaaccgca gggtgcggct ttatggtgcg tattcggttg cggcggcaac cgcgatcgcg
    16981 gcaaacgccc gctgatgggc gcggcagccg tacagggcgc ggataaagtc gtcgtcacca
    17041 gcgacaaccc gcgtttggaa aatccgcacg acatcatcaa cgacatcctg cctgccgttc
    17101 ccgcgcccga atgcgtcgaa gccgaccgtg ccgccgccgt ccgttatgcg gttgaacaag
    17161 ccgccgcaaa cgacatcatc ctgattgccg gcaaagggca tgaaaactat caggatgtac
    17221 aaggcgtgaa gcaccgtttt tccgatcttg aaatcgtcgg acaggctttg ttaactcgta
    17281 aataatggga tattcggacg gcatcgtatg aaacaatccg cccgaataaa aaatatgaat
    17341 cagacattaa aaaatacatt gggcatttgc gcgcttttag ccttttgttt tggcgcggcc
    17401 atcgcatcag gttatcactt ggaatatgaa tacggctacc gttattctgc cgtgggtgct
    17461 ttggcttcgg ttgtattttt attattattg gcacgcggtt tcccgcgcgt ttcttcagtt
    17521 gttttactga tttacgtcgg cacaaccgcc ctatatttgc cggtcggctg gctgtatggt
    17581 gcgccgtctt atcagatagt cggttcgata ttggaaagca atcctgccga ggcgcgtgaa
    17641 tttgtcggca atcttcccgg gtcgctttat tttgtgcagg cattattttt catttttggc
    17701 ttgacagttt ggagatattg tgtatcgggg ggggtatttg ctgacgtaaa aaactataaa
    17761 cgccgcagca aaatatggct gactatatta ttgactttga ttttgtcctg cgcggtgatg
    17821 gataaaatcg ccagcgataa agatttgcga gaacctgatg ccggcctgtt gttgaatatt
    17881 ttcgacctgt attacgattt ggcttccgcg ccggcacaat atgccgccaa gcgtgcccac
    17941 attttggaag cagcaaaaaa agcgtcaaca tggcatatcc gtcatgttgc gcccaagtat
    18001 aaaaattatg ttgtggttat cggtgagagc gcgcgttcgg attatatgaa tgtttacggt
    18061 ttcccattgc ccgatacgcc ttttttgagt cagaccaaag ggctgttgat aaacggttac
    18121 caatcgaccg cccacgcgac gaatctttcg ctgccgcaga ctttggggct gccgggagaa
    18181 ccgaacaata acatcgtcag cttggcgaag caggcgggtt ttcggacggc gtggctgtct
    18241 aatcaaggaa tgttggggca ttttgccaac gaaatttcca cctatgccct acgcagcgat
    18301 tatccgtggt ttacccaaag gggtgattat ggcaaaagcg cggggttgag cgaccgcctt
    18361 ttgttgccgg cgttcaaacg ggttttgata ggaaatgcag gcacgaagcc tcggctgatt
    18421 gtgatgcacc tgatgggttc gcacagtgat ttttgcacac gtttggataa ggatgcgcgg
    18481 cggtttcagt atcaaactga aaaaatatcc tgctatgttt ccaccatcgc gcaaaccgat
    18541 aaatttttag aagatacagt taagatattg aatgaaaata aagaaagctg gtctttggtt
    18601 tacttttccg accacggttt gatgcatgtc ggtaaaggcg gcgagcgaac gttgacacat
    18661 ggtgcgtgga agcgtcaaag ctacggcgtg ccgctggtta aaatttcgtc cgatgacacg
    18721 cggcgcgaaa tgattaaagt gaggcgcagc gcgtttaatt ttttacgcgg attcggcagt
    18781 tggacgggta tcgaaaccga cgagttgccc gatgacggct atgatttttg ggggaatgtt
    18841 cccgatgtgc agggcgaagg caataacctt gcctttatcg acggactgcc cgacgacccc
    18901 gcgccgtggt atgcgggaaa aggcaaatcg actaaaaata cgtctaaaaa atgatacgta
    18961 cagaaaaaat gccgaatgag aatgggaaaa taatctgtgt tttaccacag caaaacaggc
    19021 gataaaaaaa atcagccgct accgatgtgt ccgccgcccg aatattaacg aaagtaaata
    19081 tgaaaccact ggacctaaat ttcatctgcc aagccctcaa gcttccgatg ccgtctgaaa
    19141 gcaaacccgt gtcgcgcatc gtaaccgaca gccgcgacat ccgcgcgggc gatgtgtttt
    19201 tcgcattggc gggcgggcgg tttgatgcgc atgattttgt tgaagacgta ttggctgctg
    19261 gtgcggcggc ggttgtggtt tcgcgcgaag attgcgttgc aatggatggc gcgttgaaag
    19321 tcgatgacac gcttgccgca ttgcaaacgc tggcaaaggc gtggcgcgag aatgtgaacc
    19381 cgtttgtgtt cggtattacc ggctcgggcg gtaagacgac ggtgaaggaa atgttggctg
    19441 cggtattgcg ccgccgtttc ggcgataatg ccgttttggc gacggcaggc aacttcaaca
    19501 accacatcgg attgccgttg actttgttga aattaaacga aaaacaccgc tatgccgtga
    19561 ttgaaatggg tatgaatcat tttggcgaac tggcggtttt gacgcaaatc gccaaacctg
    19621 atgccgcctt ggttaacaac gccctgcgtg cccatgtcgg ctgcggtttc gacggagtgg
    19681 gcgatattgc caaagcgaaa agcgagattt atcaaggctt atgttcagac ggcatggcac
    19741 tgattcctca agaagatgcc aatatggctg tcttcaaaac ggcaacgctt aatttgaata
    19801 cgcgcacttt cggcgtcgat agcggcgatg tccacgcgga aaatatcgtg ctgaaaccgt
    19861 tgtcgtgcga atttgatttg gtgtgcggcg atgagcgcgc cgccgtggtg ctgcctgttc
    19921 ccggccgcca caatgtccac aacgccgccg ctgccgccgc gctggctttg gctgcgggtt
    19981 tgagtttgaa cgatgtggcg gaaggtttga aaggcttcag caatatcaaa ggccgtctga
    20041 acgtcaaatc cggaatcaag ggcgcaaccc tgattgacga tacttataat gcgaaccctg
    20101 acagcatgaa agctgcgatt gacgtgttgg cgcgtatgcc tgcgccgcgt attttcgtga
    20161 tgggcgatat gggcgaactg ggtgaggacg aagccgccgc catgcacgcc gaagtcggcg
    20221 cgtatgctcg cgaccaaggc atcgaagcgg cttattttgt cggcgacaac agcgtcgaag
    20281 cggcggaaaa atttggcgcg gacggtttgt ggttcgccgc caaagacccg ttgattcaag
    20341 tgttgcgcca cgatttgccc gaacgcgcca ccgtgttggt gaaaggttcg cgctttatgc
    20401 agatggaaga agtggtcgag gcattggagg ataagtgaaa atgaaaagtc gacgtttttt
    20461 taaagcctta ttgttgattg ccgcgctggt cggcgcgttt tatgccggaa tgcagacgca
    20521 ggcgtatctt tatgaagatt tatgtttaga cttgggtggc ggcaaaaatc cggggagtta
    20581 cccgatttgc gtgattgaga aagtccctgc acgttaatct gcaaaagccg tccgaaacct
    20641 tgccgggcgg caagccaacc tcaaacgggc gcaggcccg
//
LOCUS       DAXHKG010000021        20614 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.021, whole genome shotgun sequence.
ACCESSION   DAXHKG010000021 DAXHKG010000000
VERSION     DAXHKG010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20614
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.021"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..231)
                     /locus_tag="ACFMWP_000599"
     CDS             complement(<1..231)
                     /locus_tag="ACFMWP_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HFC5891240.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARID"
     gene            complement(331..3159)
                     /locus_tag="ACFMWP_000600"
     CDS             complement(331..3159)
                     /locus_tag="ACFMWP_000600"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HFC5891241.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVALCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(3364..4647)
                     /gene="gltA"
                     /locus_tag="ACFMWP_000601"
     CDS             complement(3364..4647)
                     /gene="gltA"
                     /locus_tag="ACFMWP_000601"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HFC5891242.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            complement(4759..5007)
                     /locus_tag="ACFMWP_000602"
     CDS             complement(4759..5007)
                     /locus_tag="ACFMWP_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HFC5891243.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(5011..5718)
                     /locus_tag="ACFMWP_000603"
     CDS             complement(5011..5718)
                     /locus_tag="ACFMWP_000603"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HFC5891244.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRVV"
     gene            complement(5839..7602)
                     /gene="sdhA"
                     /locus_tag="ACFMWP_000604"
     CDS             complement(5839..7602)
                     /gene="sdhA"
                     /locus_tag="ACFMWP_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HFC5891245.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDSQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(7605..7946)
                     /gene="sdhD"
                     /locus_tag="ACFMWP_000605"
     CDS             complement(7605..7946)
                     /gene="sdhD"
                     /locus_tag="ACFMWP_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HFC5891246.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(7940..8317)
                     /gene="sdhC"
                     /locus_tag="ACFMWP_000606"
     CDS             complement(7940..8317)
                     /gene="sdhC"
                     /locus_tag="ACFMWP_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HFC5891247.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(8596..9999)
                     /locus_tag="ACFMWP_000607"
     CDS             complement(8596..9999)
                     /locus_tag="ACFMWP_000607"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC5891248.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(10248..10985)
                     /locus_tag="ACFMWP_000608"
     CDS             complement(10248..10985)
                     /locus_tag="ACFMWP_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HFC5891249.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(11264..13540)
                     /gene="metE"
                     /locus_tag="ACFMWP_000609"
     CDS             complement(11264..13540)
                     /gene="metE"
                     /locus_tag="ACFMWP_000609"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HFC5891250.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGTVEFNRLSLLQKLLPVYVEILNALVEAGAEWIQIDEPALTVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGIIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(13678..14556)
                     /gene="metF"
                     /locus_tag="ACFMWP_000610"
     CDS             complement(13678..14556)
                     /gene="metF"
                     /locus_tag="ACFMWP_000610"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HFC5891251.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDELPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            14756..15031
                     /locus_tag="ACFMWP_000611"
     CDS             14756..15031
                     /locus_tag="ACFMWP_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HFC5891252.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            15031..15156
                     /gene="ykgO"
                     /locus_tag="ACFMWP_000612"
     CDS             15031..15156
                     /gene="ykgO"
                     /locus_tag="ACFMWP_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HFC5891253.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(15262..15462)
                     /locus_tag="ACFMWP_000613"
     CDS             complement(15262..15462)
                     /locus_tag="ACFMWP_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891254.1"
                     /translation="MIGRLFRIFFFFALAALIMNRLFSRRQKRALREVAEISARVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            15605..16744
                     /locus_tag="ACFMWP_000614"
     CDS             15605..16744
                     /locus_tag="ACFMWP_000614"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HFC5891255.1"
                     /translation="MSQNASVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            16741..17322
                     /gene="metW"
                     /locus_tag="ACFMWP_000615"
     CDS             16741..17322
                     /gene="metW"
                     /locus_tag="ACFMWP_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HFC5891256.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            17439..18284
                     /locus_tag="ACFMWP_000616"
     CDS             17439..18284
                     /locus_tag="ACFMWP_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
                     /protein_id="HFC5891257.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(18334..18894)
                     /gene="efp"
                     /locus_tag="ACFMWP_000617"
     CDS             complement(18334..18894)
                     /gene="efp"
                     /locus_tag="ACFMWP_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HFC5891258.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(18937..20085)
                     /gene="earP"
                     /locus_tag="ACFMWP_000618"
     CDS             complement(18937..20085)
                     /gene="earP"
                     /locus_tag="ACFMWP_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HFC5891259.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTALVPDIVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSLQESVQKYFWFMGFSEKSGGLIRERDYRNA
                     VRFDTEALRERLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPMTLLLAGTQIIDS
                     LKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYSPETASVHRRLSDDLNGGEALSAT
                     QRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(20104..20382)
                     /locus_tag="ACFMWP_000619"
     CDS             complement(20104..20382)
                     /locus_tag="ACFMWP_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891260.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         5119 a         5227 c         5170 g         5098 t
ORIGIN      
        1 atcgatacgt gccaaaactt ggtcggcaac aacggtttca ccgtcttgcg ctacgatttc
       61 aaccaatacg ccggcttgtg gagaaggtac ttccaaaacc actttgtccg tttcgatatc
      121 gatcaggatt tcgtcacggg caactgcttc gccaactttt ttcttccatt ccaagagcgt
      181 gccttcagat acgctttcag acagcatagg tacttttaca tcaataatca ttttgtgtct
      241 ccaatggccc tttcagacgg cctgttgtgt gtttttcatt ctgcatatgg gtgttccgcc
      301 tgagcagcct cagacggaat gctacttggc ttacaatgcc aaagcgtctt caaccaattg
      361 tttcaattga gcaatgtgtt tgcttgagta gcccactgca ggcgatgcgc tgcttggacg
      421 accggcataa gacagttttt gctcttcgct gataacgtct tcgatgcggt ggcggatttg
      481 gtagaacgcg ccttggtttt tcggctcttc ttgtgcccaa accacagatt ttgcgttcgg
      541 atatttcgcc agttcggctt taacctcgtc gtatgggaac ggatacagct gctcaacgcg
      601 gacaatagcg acatcatctt ccagtttacg ttcggctcga ccggcttcca agtcatagta
      661 aacctgaccg gcacacaatg ccacgcgttt cacgctgtcg ttgcttgcgc gttcggcggt
      721 atcgccgata accggacgga aagtcgaacc ttcggtgaag ttttccagcg ggctcattgc
      781 ccctttgaat cgcaacaggc gtttggacat gaaaatcact agcggtttgc ggtatgaacc
      841 taagacttga cgttgcaaga ggtggaacat ttgcgacgct tcagacggca tgatgacttg
      901 catattgttc tcagaacaca gttgcaacca acgttctacg cgtgcagaag agtgctcggg
      961 accttgaccg tcgtagccgt gcggaaggat ggtggtcaga ccgcacaaac gaccccattt
     1021 ggtttcgcct gaagacagga attggtcaat agtcacttgc gcgccgttgg cgaagtcacc
     1081 aaattgagct tcccaaatgg tcagcttgtc aggcgcggag caggcaaagc cgtactcgaa
     1141 cgccatcacg gcttcttcgt tcaaaatgga gtcgataacc aagaactcgc ccataccttc
     1201 gcccatatgg cgcagaggaa cataagtacc gtcatcccat ttttcacgtt tttgatcgtg
     1261 caatactgca tgacggtgtg agaatgtacc gcgcccggag tcctcaccgg agatacgcac
     1321 gccatgacct ttggttacga ggctggcgta tgccaaggtt tcggccatac cccaatctat
     1381 ggcctgtttg ccggatgcca tggctttacg cgcttcaatc acacgttttg cagtcggatg
     1441 cagggcaaag ccttccggta cggcggtaaa cttctcagtg agacgctcaa tatctgcggc
     1501 aggcaaaccg gtttcgatgt gttcgcgcca atctttgcct tggtatttgc tccagtcgat
     1561 ttgcgtgcgt tgaaagttgc tcaacgttgt ttgctcgacg tgttcgcctt tgtccaaagc
     1621 atcacggtag gcttggatgt aaccgtctgc ctcggcttgg gttaccacgc cttcggcaat
     1681 cagttgctcg gtgtacaaag cacgcgcacc ggggtgttgc gatacttttt tgtacatcat
     1741 cggttgggtc aaggtcggat catcgccctc gttgtgaccc catttacggt agcagacaac
     1801 gtcaatcacg atgtctttat ggaatttttt gcggtaatcc aaagcggctt ggatggcaaa
     1861 gcaaacacgc tcaggatcat cgccgttcac atggataacc ggagcggaaa ccatttttgc
     1921 gatatcggta cagtgtacgg ttgaacgggt atcgcggata tcggaagtgg taaagccgat
     1981 ttgattgttg atgacgatat gaaccgtacc gccggtggta taaccgcgcg ttttagacag
     2041 gttgaatgtc gcttggttga cacccaaacc gataaatgcg gagtcgccgt gaatcaatac
     2101 gggcaagact ttatcgcggc cgttttcgcc caaacgtttt tgcttggcgc gtgcagaacc
     2161 ttccactacc ggattgacga tttccaagtg tgacgggttg aacgccaaag aaacgtgcat
     2221 cggaccatgt ggagtggcga tgtcggagct gaagcccatg tggtatttca cgtcgccgct
     2281 aggcaatttg atttcggcac ggccttcaaa ctcagcgaac aaatctccgg gttttttacc
     2341 caaaatgttc accaaaacat tcagacggcc acggtgcgcc ataccgatga tgacttcttc
     2401 cacgccgtct ttaccggcgt tttgaatcag gtagttcaaa ccggcaatcg cgctttcgcc
     2461 gccttcgaca ccgaaacgtt tctgaccgac atatttggta tgcagataac gttccaaagt
     2521 ctcggcagca gtcatctctt tcaagatacg gcgtttttga tcggcattgt aatgcggtgt
     2581 ggacaatacg ctttcaaaat aattgcgtac ccagcggcgc tcttcggtat tgggaatata
     2641 gatatattcc aatgcgatgt ggccgcagta ggtttgtttg aggttgctga tgatttggga
     2701 caaaggcagt ttgccgcgat tggcaaaatc gccctcgccc atattgaatt gaagcgccat
     2761 atcggcatca gacagaccgt ggaatttcgg atcgagggct tcaatatcgc gcggggggat
     2821 acgtttgagc ggatcaagtt gggctgcacc cacgccttgg atacgatagg cagaaatcag
     2881 ccgtaaaacg ctgacttgct tcttcagcat tgcctcatcc gcaccgcccg caacggcaga
     2941 tgcaattttc tttttcgcca aagtaacaaa tgattcgcga atcggtgtgt gtgcgacatc
     3001 gacagcaacc gtccccggct gtttgctcaa atcggtgaaa tactgcttcc atttttcatc
     3061 aaccgcatcg gggttttcca aaaaagcctc gtacaattcc tcaatgtagg gtgcgttcga
     3121 accgaacagg taagagaaat tgagtttttc gtccatcatg gcgtgcgctc ttttctttaa
     3181 aatataaaca aagggtagaa gtccgcgtcc tgacggctga actgatgccg tctgaaaaga
     3241 cattttattc taccctattt taaaccggat tgcctgtatt gatttcatcc gactacaatc
     3301 aaatgtatac agaaagcaat ccgattctct aatattgcct gtttgacaat atattaatgt
     3361 atgttacctc tctcctgccg gcacataatc gcggcgttcc gaaccggtat aaagctggcg
     3421 cgggcggccg attttcagcg aaggatcgct gatcatctcg tgccagtgcg aaatccagcc
     3481 cacgctgcgc gacagggcga agatgacggt aaacatttcg gtcgggatgc ccagcgcgga
     3541 caggacgatg ccggaataga aatcgacgtt tggatacagc ttgcgttcga taaagaacgg
     3601 gtctttcagc gcaatctgtt ccaattccat cgccagtttg aatttcggac tgtcttccaa
     3661 gcccaattcc ttcaaaactt catagcaggt ttcgcgcata atgctggcac gcggatccat
     3721 attgcggtac acgcggtgac cgaagcccat cagacggtat ttgcgttgtt tcacaccttc
     3781 catgtatgcg gcaacattag acacatcgcc gatttcgtcc aacattttca acacggcttc
     3841 gttcgcaccg ccgtgcgaag caccccacag gcaggcgata ccggcagcaa tacaggcaaa
     3901 cgggttcgca cccgaagacc ctgccagacg gacggttgaa gttgaggcgt tttgctcgtg
     3961 gtcggcatgc aaaataaaga tgcggtcgag cgcgcgtgcc aaaacgggat tgggtttgta
     4021 gtcttcacac ggcgtggcga acatcatatg aaggaagttt tcggaataag aaagattatt
     4081 cttcggataa ttgaacggca gaccgtttga atagcggtag cacattgccg caatggtcgg
     4141 gattttggaa atcaggcggt aaatcgcgat tttgcggtgt tcgggattgc taatgtccaa
     4201 gctgtcttgg tagaacgcag acagcgcacc gaccacgccg accatcatcg ccatcggatg
     4261 cgcgtcgcgg cggaaccccc ggaagaacca agtcagctgt tcatgcacca tcgtgtggcg
     4321 gcggacggta ttgtcaaatt ctgccttttg ctcgggagtc ggcagttcgc cgtaaatcaa
     4381 caggtagcag acttccaaat aatcggactt ttcggccagc tgctcgatgg ggtatccgcg
     4441 ataataaagc aagccttgat cgccgtcgat gtaagtaatt ttagactcac agcttgcggt
     4501 tgaaacaaat ccggggtcga aagaaaacaa acctgtattt tttgtcagcc cccgaatgtc
     4561 aaccacatcg tgcccgatgc tggcttccaa taccggcagc tccaaacctg cctgacccgg
     4621 tacgttgagt ttgattgatt tggacatatt attgctcctt tgcaagttat aacccacgtt
     4681 actgcatccg cagcacgttc tttgccttca gacggctttt gcattttgaa atctgcctgc
     4741 aggcagattt cagatgcctc atgcccgtct gattttttca agcatcggga taaggtgccc
     4801 tttgtccgtt tccgaatgcc cgttaatcaa ggcaagcaat tcttgatctt gaaattcaag
     4861 gatttcggaa aactcggaca gctctttatc gctcaaatgc tcgaattctt tttccataaa
     4921 cctgccgaag attaaatcta attccaacaa tccccggcgg gtttgaaaac ggattttccg
     4981 tttggcaata tcgtcaaaaa ccatcatttc ttaaacgacc cgtttcaaca taatctcttt
     5041 aatcttaccg atggctcggg tcggattcaa gtgtttagga catacgtcta cgcagttcat
     5101 aatggtgtgg caacggaaca aacggtatgg gtcgttcaga ttatccaaac gctcattagt
     5161 gatggtatca cggctgtccg caatgaaacg gtaagcattc agcaaaccgg acggaccaac
     5221 gaatttatca gggttccacc aaaatgacgg gcaggcagtc gaacagcagg cgcacaaaat
     5281 acactcgtac aaaccgtcca actctttacg ctcttcctga gtttgcagac gctctttgtc
     5341 cgcatcaatc ggattatcgt tgacaacata aggtttgacg gaatggtatt gtttgaagaa
     5401 ctgggtcata tccacaatca ggtcgcggat aacaggcaga cctggcagag gacggatttt
     5461 aaccggctgt ttcaagccac gcagatcggt caaacacgcc aagccgtttt tgccgttgat
     5521 gttcataccg tccgatccgc aaatgccttc gcggcaggag cggcggaaag acaaggtatc
     5581 gtcttgtgct ttcaggcgta ccaaagcatc caaaagtttc acgtcggtcg gttccaattc
     5641 caactcgtaa cgctgcatat aaggcttggc atcaacatcc gggttgtaac ggtaaatttc
     5701 aaaactcatt ttttccatga gaagtgttcc ttttctcatc aactgcccaa tgattttgta
     5761 ttataaattc aagcagttca atgtgggtat ggttagattt cagacgagct tatgaggcga
     5821 agaccgtctg aaaacgcatc aataaacgcg cttggccggt ttgatgtatt ccacgctcaa
     5881 aggcttggta tgtaccggtt tgtaagacaa agtattggta tctgaatggt acagcgtatg
     5941 tttcatccag ttttcatcat cgcgctcagg atggtcgtct gaagcgtgcg caccgcgtga
     6001 ttctttacgt gcttcggcag acaccaaagt cgctttcgcc acttcaatta ggttatccaa
     6061 ttccaaagcc tcgatacgcg cggtattcca cactttgctc ttgtctttga tttcggtacg
     6121 tttcacacgc tcggcaatcg ccatgacttc tcgaacgcct ttgctcagaa tctcatcagt
     6181 acggaacacg ccggcgtgca attgtacgga gcgttgcagt tcgcggcgca atgcatcaac
     6241 gttttcacca tcggtttggc tgtccaaacg ctcgatacgt tggcgggtca actcaccagc
     6301 attagcaggc aaaggtttcc agtcgctttg ctctttgatg aatttaatca tgctgtcgcc
     6361 ggcagcttta ccgaatacca ccaagtccaa cagggagttg gtacccaagc ggttcgcacc
     6421 gtgtacggaa gcacaagcgc actcacctgc cgcatacaga ccttttacag gcacttcgta
     6481 ttcgtcgcct tgaggaacga caacttcgcc atggtagttg gtcggaatac cgcccatcat
     6541 atagtgggta gtcggcacaa cgggaatcgg gtctttaatc ggatcgatac cggcgaactg
     6601 aatggaaatc tcgcggatgc ccggcagttt ttccataatt ttttctgcgc cgatatggtc
     6661 gattttcagt aagacatggt ctttgttttt accgcagccg cgaccttcgt agatttccat
     6721 cgccatcgcg cgggaaacaa cgtcgcgaga agccaagtct tttacggtcg gcgcatagcg
     6781 ttccataaag cgttcgccgt cggcattcaa cagaataccg ccctcgccgc gtacgccttc
     6841 ggtaatcaac acgcccgcac ctgccacgcc ggtcgggtgg aattgccaga attccatatc
     6901 ttccaacgga atacccgcac gcgcgcaaat gcccaaacca tcgccggtat tcatataggc
     6961 attggtagaa gaagcataaa tacgaccgcc accgccggta gcaaacatca cagctttagc
     7021 gtggaaaata taaacttcgc cggtttccat ttccatggcg gttacgccga cgacatcgcc
     7081 gttttcatca cgaatcaaat cttgtgccgt ccattccaca aagaattgcg tattggcacg
     7141 gacgttttgt tggtacaaag tatgcagcat cgcatgacct gtacggtcgg caaccgcaca
     7201 ggcgcgttct accgcgcgtt taccgtgttc ggcagtatgg ccgccgaaag gacgctgata
     7261 aattttaccg ctttccacac ggtcaaaagg catacccatg tgttccaact caattacggc
     7321 ttcaggcgcg gcgcggcaca taaactcaat cgcatcttgg tcgcccaacc agtcggaacc
     7381 tttcacggta tcgtacatgt gccagtccca acggtcttcc tgcacattac ccagagaggc
     7441 ggaaataccg ccctgcgccg ctacggtatg cgaacgggtc gggaacactt tagacaaaac
     7501 ggcacaattc agaccggatt tggataattg gagggctgcg cgtaaacctg caccaccacc
     7561 gccgacaatc acggcatcaa acttgcgaac aggaaaaccc atacttaccc ccaaattact
     7621 ttaattgaat acaccaagca gccgaccagc cagacgatgg tggcaacctg caaaaacaaa
     7681 cgcacgccga agggtttgat atagtccatc cacaaatcgc ggatacccac ccaagcgtgc
     7741 aagaatacgg cgatgaagct cacttgggta aatactttta cccaagtttg actaaaaaat
     7801 gcctgccatg ccgaatattc tttaggcagg gaaaatagaa ccactaaaag tgcaacggta
     7861 taaatcaaca taataaccgc agtcgcacgt tgcatcgccc aatcgcgcaa accgtaatgg
     7921 gcaccggtca atttacgttc taccataaca acgctcccaa aacgacagtc aaaaccaatg
     7981 cagaagcaaa tacggcttta gcggtattgc gcgcagtatt cagctcaagg cctttgtgcg
     8041 catccaaaaa taaaaagcgg ataccggcga gagaatggtg cagataagcc cacaatacac
     8101 cgattaaaac cagcttgacc aaaggatggg aaacaatggc acggtaagtt tcaaatgcag
     8161 actcttgact cagggtaccg gacaggaaat acagcaggaa aggcagcata ataaacagcc
     8221 cgaccccgct gatgcggtga aggatggaaa ctatcccggg tatcggcaga cggatgttcg
     8281 gcaaatccag ataaacagga cgcggtttgg cagacatagt caattcctct gtagttatat
     8341 atcgactcaa aaaccgtaaa cccattgcta cactgggtta cataaacgtt aatttacctg
     8401 ttttatccca ttttgaacag tgtattttaa aaacaaactg atagattttg acaaacacgc
     8461 gtggaaacag cagattaaaa gaaagatttt tagttttgcc gcccccttcc cgacacggta
     8521 tcagcatccg accccatccc caaaaacaaa atgccgtctg aaaaaatttc agacggcatt
     8581 gttttgccat atcggtcagg ctttcaattt cgcatcggca tcgcgcaacg cggtacgcag
     8641 accttcctcg ataacgggat ggtagaacgg catatccagc atttgcggaa cggtcatctt
     8701 catttgatgc gcccatgcca gcaagtgcgc caaatgttcg gcggcagggc ctacgatttc
     8761 cgcgccgata aagcggccgg tggctttttc ggcatacagg cgcatatggc ctttgttcac
     8821 cagcatcacg cggctgcggc cttggttttt gaacgatact tcgccgatga caaattcgtc
     8881 ggcttggtat tgcgcggcaa cctgcgcgta tttcagaccg acaaagccga tttgcggact
     8941 ggtaaacacc acgccgatgg tgctgcgccg caaaccgccg ccgatattcg ggtagcggcc
     9001 cgcgttatcg ccggcaatct tgccttggtc ggcagcttca tgcagcagag gcagttggtt
     9061 ggacgcgtcg cccgcaataa agatatgcgg aatgctggtc tgcatggtca gtgggtcggc
     9121 aacgggtacg ccgcgcgcgt ctttttcgat attgatgttt tccaaaccga tattgtcaac
     9181 gttcggacgg cggcccacgg ctgccagcat atattcggca acaaatacgc ctttttcgcc
     9241 gtcctgctcc caatggactt ctacattgcc gtctgcatct agtttgacct cggttttagc
     9301 atccagatgc agtttcaatt cttcgccgaa cacggctttc gcctcgtctg aaacgacggg
     9361 gtcggaaatg ccgccgatga ttccgcccaa accgaaaatt tcaactttca cgcccaaacg
     9421 gtgcaatgcc tgacccagtt ccaaaccgat aacacccggc ccgaacacgg caacgcgctt
     9481 aggcagcgta tcccatgaga aaacgtcatc gttgataatc aaacgattgc ccaaagactg
     9541 ccattgcggc aggatgacgg gacgcgaacc ggtagcaatc acgaaacttt ttgccgtaat
     9601 ttgagtatgc tcgtcgattt ggacggtatg ctcgtcgata aatttagccg aacccatgat
     9661 gcgcttgtcg gcaggccact cttccacatc ggcaacgaca aagccgacaa aacggtcacg
     9721 ctcggattta acgcgctgca tgacctcttc accgttgacg acgatgctgt ctttgtccaa
     9781 atgcacgccg aacgggtcgg tatgcaatgc gtggtggcgc gcttctgcgg cggcaatcaa
     9841 gagtttggaa ggcatacaac ccacgcgcgc gcaggttgtg ccgaacacat tgttttcaat
     9901 caggtaaaca ttatccgaat gtaaacgggc attgcgaaac gcacccatac cggcagtacc
     9961 gccgccgatt acgacgacat ccgcttgaat ttttttcata atctttgtcc ttccgttttc
    10021 gtctgaaaca ttgccgacac agaacatatc ggtttcagac ggcatttaaa tattttccca
    10081 atcaaaaaca tcattcagat aaataaaaac aaaatttcga ttgagtgcaa caatatccaa
    10141 attctcttat aaatatagag ttattcggat cggcagtgta gaaccgcccg aataactcta
    10201 tccggtatat cagacagttt aatcaaaccg ccttaagcaa acagctatca gtttttagcc
    10261 aagtaagctt ccaaatcttc gctgccgccg atgtatttgc cgccgatgaa gacttgaggg
    10321 gcagtcatct tgccggtaat ggcgcgaacg gaagtaacgg ttgcatcttt gcccaatacg
    10381 atttcttcgt aagacaaacc tttgtcttgc aaagcttgtt tggctttggc gcagaattgg
    10441 caacctggtt tagtgaaaat tgccacagac tcttgagctt tccaatcagg agcaacgaat
    10501 ttcagcatag tatctgcatc ggatactttg aacggatcgc ctggttcttc aggctcgatg
    10561 aacatttttt caaccacgcc gtcgttaacc agcatggagt aacgccaaga gcgtttaccg
    10621 aagcccaagt cttctttacc gaccagcata cccatacctt cggtaaattc gccgttgcca
    10681 tcaggaatca tgtagatgtt gtcggattct tcttcggcag cccaagcgtt cattacgaac
    10741 gtatcgttta cagatacgca gtagattgcg tcaacgccgt tttctttgaa cgcgccgaac
    10801 aattcgttgt aacgcggcag gtgtgaagaa gaacaagtcg gggtaaatgc accgggcagg
    10861 gagaatacga ctactttttt gcctttgaac aaatcatcgg tagacacatc tttccaagtg
    10921 tcgccgacgc gggtgcggaa tactacggaa ggtacttttt gaccggtacg atcttgcaaa
    10981 gccattttaa gctccttaat agattggttt gagaaataat tgtgaatcgc tgggcattct
    11041 accccatgca aaatgatttg tataatttat agttcaaata atataaatta tttaaaacta
    11101 tcaaacacaa ctccgatttg cctgtttccc acatataaag ccgaattaga aaaaaacaag
    11161 ctgcaatgaa aagattttcc ggcaactgcg cccttgcgcc gcaaatcagg acaaaatacc
    11221 gtctgaaagg ctttcagacg gtatttattc atacggtctc ggcttatttc gccaattcgg
    11281 cacgcaattt gtgggttacg ttcatcatca cttggagttg ttccagagtt tctttccagc
    11341 cgcgtgtttt caggccgcag tccgggttaa cccacagacg ttcaaccggt acaacctcga
    11401 tggctttgcg caacaggtgc tccacttcgg cttctgtcgg tacgcgcggg ctgtggatgt
    11461 cgtaaacccc cgggccgatg tcgttcgggt atttgaattc gccgaacgcg gtcaagagtt
    11521 ccatgtcgga acgtgaagtc tcgatggtga tcacgtccgc atccattgca gcaatcgcag
    11581 gcaggatatc gttgaactcg gagtagcaca tatgagtgtg gatttgtgtg ctgtcttcgc
    11641 aaccggcaga ggacaggcgg aaggattcgc ccgcccagtt caggtaggca tcccaatcgg
    11701 cgcgtttcag cggcaagcct tcgcggatgg caggttcgtc aatttggatg actttgatgc
    11761 ctgctttttc cagatccaat acttcgtcgt tcagagccag tgcgatttgt ttgcacacgg
    11821 tagagcgagg aatatcgttg cggacgaaag accattgcag aatggttaca gggccggtca
    11881 acataccttt catcggacgt ttggtcaggc tttgagcgta agtagaccaa gcgacagtca
    11941 tggcttcagg acggcttacg tcaccgaaga taatcggtgg tttaacacaa cgtgagccgt
    12001 agctttgtac ccagccgtat tgggtgaatg caaaaccgct caacaattcg ccgaagtatt
    12061 cgaccatgtc gttacgctcg gcttcgccgt gtaccagtac gtccaaatcc agtttttctt
    12121 gttcttcaac caccaaggcg atttcttttt tcatcgcggc ttcgtaatcg gcggcagaca
    12181 gttcgccttt tttgaaggct gcgcgtgctt ggcggatttc ggtagtttgc gggaaagaac
    12241 cgatgttggt cgtcggcagc agaggcaggt tcaaccatgc ttgttgcgct ttgatacggt
    12301 cggcaaatgg agatttgcgt tggtctgcgt tggcaggcaa atcggccagg cgtttggcaa
    12361 cgtctgcacg gtggatttcg ctgctgttgg cgcgtgaatc ggcagcagct tggctggcgg
    12421 ccagttcttc ggcaacggaa tcgcgacctt cgttcaatgc ggctttcaga acgcgcaatt
    12481 cttgggtttt ttgcagggta aatgccaacc aagagtacag gtccggtttg ttggctttca
    12541 gtttttcttc aactgacaag tcaaatggag tgtgcagcag agagcaagag ctggaaatcc
    12601 acaaacggtc gcccagtttg gcttgcagag gctcaacagt ttccaaaact ttgttcaggt
    12661 tggcgcgcca gatgttgcgg ccgtcgatga tgcctgcaga cagaactttg tcgtagtcgg
    12721 caaatgcgtc cagttgctcg ggagcgcgta ccaagtcgat gtgcaggccg tcaacaggca
    12781 gggatttcaa caatgcggcg tgttcggcaa cagaaccgaa gtaagtgctc agcaggattt
    12841 tggcacttac tttgctcaaa gtagcgtaaa cgtctttgta ggcttctacc cattctttag
    12901 gcagatcgac agtcaaagca ggctcgtcga tttgaatcca ttctgcaccg gcttcaacca
    12961 aagcgtttag gatttcaacg taaacaggca gcagtttttg caacaggctc aggcggttga
    13021 attcgactgt gcctttttct ttacccaccc acaggaaagt caacggacct acaacggtcg
    13081 gtttggcttt cagaccgagg gcttgggctt cttgcagttg ttgaacatag tgtttggcat
    13141 tggctttgaa ttcggtatcg gcgtggaatt caggcaccaa gtagtggtag ttggtgtcga
    13201 accatttggt catttcgata gcgaattggt ctttgttgcc gcgcgccagt tggaagaatt
    13261 gttccaaaga caggttttgg ctgtcgaaac cgaagcgggc gggaatcgcg ccggtggcga
    13321 cttgcaggtc gaggatgtgg tcgtagaaag tgaaatcgcc tacggcaacg aaatcggcgt
    13381 tggcagcggc ctggtgtttc cagtttttct cgcgcaagtc tttagcaaca gccagcaatt
    13441 cttgctcgct gatttctttg cgccagtatt tttcttgtgc gaatttcaat tcgcggaagg
    13501 cgccgacacg cgggaagcct gagaaatgta atgttgtcat gttgaactct ccagttggat
    13561 tttgtaagga ccggttcgat ccaaatcggc cggtattgta aatcagaatg gctcggatgg
    13621 ggcggtgttt tgctttttag acaccttaga tgccgtctga aactgtttga tacggcttta
    13681 agggcgcacg cctaaaatat ggcagatggc gtaagtcagc tcgctgcggt taagcgtata
    13741 gaagtggaaa tctttcacgc cttcgcggga caggactttg accatatcga tggcgatact
    13801 tgccgccacc agattgcgcg taccttggtc gtcgtccaaa ccttcataca tttgcgacag
    13861 ccagcttggg attttgacgt tggttacttg cgccattttg ccgagctgct tgaagttggt
    13921 aacaggcaaa ataccgggga cgatttccac atcgataccc aacatcacgc agcggtcgcg
    13981 gaagcgcagg tagcgttcca catcgaagaa gaattgggtg atgacgtggt tcgcgcccgc
    14041 atcgattttg cgtttcagat tgatcaagtc ggcttgagcg gatttggctt ccgggtgtac
    14101 ctcaggatag gccgctacgg aaatgtcgaa gtcggcaacg gagcgcaaca gtttgaccaa
    14161 atcttcggca tagaaaggtt ttttctcgta gccgggcagc tcgtcgccgc gcagggcgac
    14221 aatgcggcgg atgccgctgt cccaatagtc tttggcgatt tggcgcaatt cgtcgggaga
    14281 agcgtcaata ccggtcaggt gcggggcggc ttccaagccg gtttcctgtt tgatgcgttt
    14341 gacgatgccg tgtgtgcggt cgcgctcgcc tgagtttgca ccgtaagtta cggaaacaaa
    14401 tttcgggtgc aaggtttgca ggcgatggat ggaatcccac agcatggttt ccatttgttc
    14461 gtttttcggc gggaaaaatt cgaatgaaac gttgatgtcg cctttcaaat cggaaaggct
    14521 gttatttaac gcattgattt cttttgcgta attcatggct gcgtaccttt tattatcttt
    14581 tatatgatgt ttcaggcaac ataataaagt tgcgccaaac atgagtcaat ttcaaaattt
    14641 tcagatttat catgaaaatt tctaatatat tacaaaaata gttaaatttc cttgtacagc
    14701 ccttctaaac tatgctagag tttgttatgt tataacactg aaagcaaggc aatatatgaa
    14761 accgaatatt catcccgaca attaccgaac cgtccttttt ttcgatagca gcgccaatga
    14821 aggctggtta atccgctcct gtgccgaaac acacggaaaa acgatggttt ggacagacgg
    14881 caaagaatat ccgctgtttt cgctggatac ttcttccgca tcccatcccg tctatactgg
    14941 caaacagcgc aacgtcaaca ccgaaggccg tgccagcaaa ttcaaccaac gtttccaatc
    15001 cgtaatgtca tcgtttagaa aggacaaata atgcaggttc tgtcttcact caaaaccgcc
    15061 aaacaacgcc accgcgactg ccaaatcgtc aggcgcaggg gcaaagttta cgtcatctgc
    15121 aaaagcaatc cgcgttttaa agcgcgccaa cgctgacccc ctgcccttcc tgcttcggtt
    15181 gtaaatcccc tcctaccgca agcccttttc aaaaaatgcc gtctgaaaca gaaaaatgcg
    15241 tttcagacgg cattttttcc gtcaatacga atccggaatg tgtttgaaat acagcataaa
    15301 cagataccaa aacagcgtcg cggcggccgc accgagcagc acccgggcac tgatttcggc
    15361 aacttcgcgc agggcgcgtt tctgcctgcg gctgaagagg cggttcataa tcagcgcggc
    15421 aagtgcgaaa aagaaaaaaa tacggaaaag tctgcctatc atgtcgggaa gcgaaaagta
    15481 tggttcgggc gcggcggcat ggggaaggat gtttcagcgc gtcaggctgc ttgtccgacc
    15541 gtgtcaaaaa gtcatgccgt ttgcgatata ataacgcttt ttgccgtatt tgttggaaca
    15601 ggatatgagt caaaatgcct cggtgggcat tgtaacgccc caaaaaattc cgtttgaaat
    15661 gccgctggtt ttggaaaacg gtaaaacttt gccgcgtttc gatctgatga ttgaaaccta
    15721 cggcgagctg aatgccgaaa aaaataatgc ggttttaatc tgtcatgcgc tgtcaggcaa
    15781 ccatcatgtt gcgggcaggc attcggcgga ggataaatat acgggctggt gggacaatat
    15841 ggtaggaccc ggcaaaccga ttgatacgga acgttttttc gtggtcggtt tgaacaatct
    15901 gggcggctgt gacggcagca gcggaccttt gtcgatcaat cctgaaacgg gtagggaata
    15961 cggcgcggat tttccggtgg ttacggtgaa ggactgggta aaatcacaag ccgcgcttgc
    16021 cgactatctc ggcatcgggc aatgggcggc ggttgtcggc ggcagtttgg gcggtatgca
    16081 ggctttgcag tgggcgattt cctatcccga acgcgtgcgc catgccttag tgattgcgtc
    16141 tgcgccgaaa ctgtccacgc aaaatatcgc gttcaacgat gtggcgcgtc aggcgatttt
    16201 gaccgacccc gatttcaacg aaggacatta ccgcagccat aataccgttc ctgcacgggg
    16261 cttgcggatt gcccgcatga tggggcacat tacctatctt gccgaagacg gtttgggcaa
    16321 aaaattcgga cgcgatttgc gttccaacgg ctatcaatac ggttatggcg ttgaatttga
    16381 agtagaatcc tatctgcgct atcagggcga caaattcgtc gggcggtttg atgccaacac
    16441 ctatttgctg atgaccaaag ctttggacta tttcgatccg gcggcggatt tcggcaacag
    16501 cctgacccgc gccgtgcagg atgtgcaggc aaaattcttt gtcgccagct tcagcaccga
    16561 ttggcgtttc gcgcccgaac gttcgcacga actggtcaag gccctgattg ccgcccaaaa
    16621 atccgtgcag tatatcgaag tcaaatccgc acacgggcac gatgcctttt taatggaaga
    16681 cgaagcctat atgcgtgcgg tcgccgccta tatgaacaac gtttataagg aatgtcagca
    16741 atgaacctgc gcgatgattt gcaactgatt tacgaccgga tacccgaagg cagccgcgtc
    16801 ttggacttgg gctgcggcga cggcgaactg cttgccgcat tggtcgaaca caaaaaatgc
    16861 agcggctacg gcatcgaaat cgacaccgac agcgtgattg ccgcgatgtc gcgcggcgtg
    16921 aatgttatcc aagccgattt ggaagaaggt ttaaccgcat tcaacgatca aagttttgat
    16981 gtgattgtgt tgagccaaac catccaagcg atgcagaata ccgaaaaaat cctgcgctgc
    17041 ctgatgcgcg ttgccaaaca ggcgattgtc agcttcccga atttcggcta ctggcgcaac
    17101 cgcgtccaaa tcgcactcgg cggacatatg ccggtttccg aacgtatgcc ctaccattgg
    17161 tacgacacgc ccaatatcca ttggtgcacg ctcaaagact ttgatttgtt gtgcgccaaa
    17221 aacaacatcc gcgtcctcga acgcgccgtg atgacgggca acagacaggt caaacatttc
    17281 cccaaccttt tgggcagcct tgcgttttac cgcgtcggct aagacaggtt gagaaccttg
    17341 tcggcaataa caggttcttc ggttctatta acaacaggcc gtctgaaaaa tgaaacggta
    17401 ggttttcaga cggcctcttt aatactggaa acaatagaat gaaaaacaaa acctcatcac
    17461 ttctcttatg gcttgccgca atgatgctga ccgcgtgttc cccgagcaaa gaagataaaa
    17521 cgaaagaaaa cggcgcatcc gccgcctcgt ccacggcatc cgccgcttcg tcttccgcgc
    17581 cccaaaccga tttgcaaccg gccgcatccg cccctgataa cgtcaagcag gcagaaagcg
    17641 tgccgccgtc aaattgcacc gacctgcacc ccgccaccgg cattgacgat ctcatgcagc
    17701 aaatcgccga acacattgac tcggactgtc tgtttgccct ttcccatcac gaactggaaa
    17761 cccgtttcgg cttacccggc ggcggctatg acaacataca gcggctgctg tttcccgaca
    17821 tccgccctga agatcccgac taccatcaga aaatcatact ggcaattgaa gacttgcgtt
    17881 acggaaagcg cacgatcagc cggcaggcac aagatgcctt gatggaacag gaacgccgcc
    17941 tccgagaagc gacgctgttg ctgatacagg gcagtcaaga aacccgcgga caaggcgagg
    18001 agccgaaacg cacgcgttat tttgaagttt cggcaacccc tgcctattcg agccggcaca
    18061 acaacggact tggcggcaat ttccaataca tcggccaatt gcccggctat ctgaaaatac
    18121 acggagaaat gcttgaaaac caatcactct tccggctgtc caaccgtgaa cgcaatcccg
    18181 acaaaccgtt tttagacatc cattttgacg aaaatggcaa aatcacgcgt attgtcgttt
    18241 acgaaaaaaa catctacttc aatccaaact tggggcgaag ataaaaaaat gccgtctgaa
    18301 acgttttcag acggcatttt tcaatgcaac aaatcaagcg cgtttgcgga attcgccggt
    18361 gcgggtatcg atttcgattt tgtcgccgtt ttcgatgtaa gacatcactt ggatttcggt
    18421 gccgccgacc aggcgcgcgg ttttcatcac tttgccggaa gtatcgcctt tgacggcagg
    18481 ctcggtatac tcgacttcgc gtacgatgat ggtgggcagt tctacggaga tggggttgcc
    18541 ttcgtagaag gtaacttcgc attggtcttc catgccgtca acgatgaatt tcaacgcgtc
    18601 gccgatgttg tcggcttcga tttcgtattg gttgaattct tcgtccataa agacgtacat
    18661 cggatcggca aagtagctgt acgtacagtt tttgcgggac aggatgacca cgtcgaattt
    18721 gtcgtcggct ttgtaaatgg tttcggaagc cgcgccggtc agcaggtttt tcagtttcat
    18781 gctgactttg gcggaagagc ggccgccttt gatgtattcg gttttttgaa cgaccatagg
    18841 atcgttgccg accataaata cattgccggc gcgcagttct tgtgctgttt tcattgtgat
    18901 tttccaatca aatcggttgt cgtaaaacgc actattctag cgtatttttt gatgctttga
    18961 aacaaaggcg gcgagttttt cggatgcgga aggctgcccg aaaagataac ggctccaatc
    19021 ctccgcgcct tgccgccagc cgttttgatg ttgttgcagg atttgccaac attcgaggcg
    19081 ttgcgtggcg gataaagcct ctccgccgtt gaggtcgtct gaaaggcggc ggtgtaccga
    19141 tgcggtttcg ggcgagtaaa atccatgcgc cttatcccaa aaggcgtgga gtttatcgag
    19201 atggacattc tcgtcttgcg ggtagatgtg ccaaaagaag ggtttgccgg caagctgggc
    19261 gcgcacgaaa ctgtcttcgc cgcgtatcac ggcgcagtcg gcgaggtgca gcagtttgtc
    19321 gaagtcctgt tgcggcacga aagggatttt gacgaggcgg acggatgccg tctgaaaaac
    19381 atcgccgtcg ttttgcaggg catcttgcgg aataacgccg ctttgtttga ggctgtcgat
    19441 gatttgcgtc cccgccagca acagtgtcat cgggctgcct gcctgtcgcc acatttccag
    19501 ccactttgcc caaacatcgc tccgatagcc gaaaagcagc cattcggggg cgtttttttc
    19561 gggaagcatc agccgctctc gcaaggcttc ggtatcgaaa cggacggcat ttcggtaatc
    19621 gcgttcgcgt atcaacccgc cgcttttttc gctgaaaccc ataaaccaaa aatatttttg
    19681 aacactctcc tgcagcgaag gcatcagatg cagcctttca ttgctttctt ccgcgctcaa
    19741 atattcccaa ttcagccaaa gcggcttgtg tcggcggatg atgtgcagca cattttcggg
    19801 caggtcgcag gcaaaagttt cgataacgat atcgggaaca agggcagtat cgatatccgc
    19861 cgcatcggaa tgccaagtgc ggacatgaat atcctgatga acgcagggaa catcgggcaa
    19921 atcagggcaa agcgcacgca aggcggacac atcgtccgtc cacaaatgca cctgccaacc
    19981 gagttcgcgg tgcaaaacac gggcgagccg ccacgaaacg ccgatgtcgc cgaaattgtc
    20041 gatgaccttg caaaaaatcc aacagacaaa aggaggagta ttcatagaaa taacggaaac
    20101 aagctaaaac gcgccgaaat agtggaacaa atacacaatc agcaaaataa tcggaataaa
    20161 cagcaacata gtttgacgtt tcaaatcaaa ctcttgtttc aaatgatgct tgatggtgtc
    20221 gaaaaggacg aatttaaaca aaaacgtcgc ttcgcaggca aggatgatgc cgttgatcag
    20281 atgctggagt ttgtcttcgg gcggattggc ggcgaaaacg gcaagcgtcg ccaacgggat
    20341 gaggcagacg gcaagccaac ggacaagcag gtttcgagac attgcaaggc tttcaaaaaa
    20401 agcaaaacgc cattatcgcc ccaagcgcac gccttgtcta acggacgcac cggagatgcc
    20461 gtctgaagcc ttgccgcagg aaaacaccgc accgccgaac ctttaaatac gcccgagacg
    20521 ggcgttcccc gaaaaatcgg acgctgccgc cgatgcctga ggacaaggcg gcagcaggca
    20581 cgggcatatt gaaaacccgg cgcgtcggtt tgaa
//
LOCUS       DAXHKG010000022        20449 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.022, whole genome shotgun sequence.
ACCESSION   DAXHKG010000022 DAXHKG010000000
VERSION     DAXHKG010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20449
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.022"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..606
                     /locus_tag="ACFMWP_000620"
     CDS             <1..606
                     /locus_tag="ACFMWP_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC5891261.1"
                     /translation="YKIGISDVSNFEGRMRHLENNGYANVAGLERILAVKTDNYKEKE
                     NLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKNETAESEFEKSVHERRQE
                     GNAGSGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSKIRLFKEAYFGKSGTRLT
                     DEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPQ"
     gene            643..1404
                     /locus_tag="ACFMWP_000621"
     CDS             643..1404
                     /locus_tag="ACFMWP_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HFC5891262.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            1459..1800
                     /gene="fdx"
                     /locus_tag="ACFMWP_000622"
     CDS             1459..1800
                     /gene="fdx"
                     /locus_tag="ACFMWP_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HFC5891263.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(2087..2674)
                     /locus_tag="ACFMWP_000623"
     CDS             complement(2087..2674)
                     /locus_tag="ACFMWP_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HFC5891264.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            2887..3084
                     /gene="iscX"
                     /locus_tag="ACFMWP_000624"
     CDS             2887..3084
                     /gene="iscX"
                     /locus_tag="ACFMWP_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HFC5891265.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(3152..3553)
                     /locus_tag="ACFMWP_000625"
     CDS             complement(3152..3553)
                     /locus_tag="ACFMWP_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC5891266.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            3764..4723
                     /locus_tag="ACFMWP_000626"
     CDS             3764..4723
                     /locus_tag="ACFMWP_000626"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HFC5891267.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQRLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            4791..6101
                     /gene="tilS"
                     /locus_tag="ACFMWP_000627"
     CDS             4791..6101
                     /gene="tilS"
                     /locus_tag="ACFMWP_000627"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HFC5891268.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKRAGFVPEALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDILALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRHFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRQEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAASDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            6175..6960
                     /locus_tag="ACFMWP_000628"
     CDS             6175..6960
                     /locus_tag="ACFMWP_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HFC5891269.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEGKMPSEEIRRLRAVVPEGRIFSVSDGILKKISSLSCADDILALIDI
                     PLGGTLPDKGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLASYKGRVFATALREEKQVVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            6970..7167
                     /locus_tag="ACFMWP_000629"
     CDS             6970..7167
                     /locus_tag="ACFMWP_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891270.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLFWMWWKWF"
     gene            7429..7782
                     /locus_tag="ACFMWP_000630"
     CDS             7429..7782
                     /locus_tag="ACFMWP_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891271.1"
                     /translation="MKNCKFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSAHKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            7794..8099
                     /locus_tag="ACFMWP_000631"
     CDS             7794..8099
                     /locus_tag="ACFMWP_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891272.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDLVYSSVRPAVKDRAEDAGADDHLDSVRDEHVQNPRENTHKDASNTGAKTH"
     gene            8161..9537
                     /gene="mpl"
                     /locus_tag="ACFMWP_000632"
     CDS             8161..9537
                     /gene="mpl"
                     /locus_tag="ACFMWP_000632"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HFC5891273.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     TAGRVKWDLMGRHNRMNALAVIAAARHAGVGIQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRIGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNAEAGDHILVMSNGGFGGIH
                     GKLLDALR"
     gene            9744..10796
                     /gene="bioB"
                     /locus_tag="ACFMWP_000633"
     CDS             9744..10796
                     /gene="bioB"
                     /locus_tag="ACFMWP_000633"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HFC5891274.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVHQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(10943..11290)
                     /locus_tag="ACFMWP_000634"
     CDS             complement(10943..11290)
                     /locus_tag="ACFMWP_000634"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC5891275.1"
                     /translation="MPFDTEIFYGENRGNVVEFARLAVDSGADVVFGQGPHVTRAVEL
                     YRDRFISYSGGNFATYGAINTSGISGIAPIFKIITNKQGKFISGTIIPITQADDKIPK
                     IDPEKPLSGGLFI"
     gene            complement(11632..11871)
                     /locus_tag="ACFMWP_000635"
     CDS             complement(11632..11871)
                     /locus_tag="ACFMWP_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891276.1"
                     /translation="MGGCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVRRILSVHIAGI"
     gene            11858..12091
                     /locus_tag="ACFMWP_000636"
     CDS             11858..12091
                     /locus_tag="ACFMWP_000636"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC5891277.1"
                     /translation="MQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHSNDFGAQGIT
                     ATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(12154..14013)
                     /gene="ilvD"
                     /locus_tag="ACFMWP_000637"
     CDS             complement(12154..14013)
                     /gene="ilvD"
                     /locus_tag="ACFMWP_000637"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HFC5891278.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHVGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDITNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(14186..15955)
                     /gene="cysI"
                     /locus_tag="ACFMWP_000638"
     CDS             complement(14186..15955)
                     /gene="cysI"
                     /locus_tag="ACFMWP_000638"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HFC5891279.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAVSDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILSELDDLIGKWAAGRDTDEGFGDFAIRTGI
                     VKPVLDAPVDFWDASKAVPIARA"
     gene            complement(15982..17796)
                     /locus_tag="ACFMWP_000639"
     CDS             complement(15982..17796)
                     /locus_tag="ACFMWP_000639"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HFC5891280.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKASDSLEAAGIQVRRAELKD
                     YKAKNIADERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDRRFEELGAKRLLERVDADLDFAAAADGWTGRIVARLKEEAAKNRATP
                     APQTTPPAGLQTAPDGRYCKADPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(17793..19079)
                     /locus_tag="ACFMWP_000640"
     CDS             complement(17793..19079)
                     /locus_tag="ACFMWP_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HFC5891281.1"
                     /translation="MTAQHQAPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNLVYPGGNMPWYRGEPLLVIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(19118..20041)
                     /gene="cysD"
                     /locus_tag="ACFMWP_000641"
     CDS             complement(19118..20041)
                     /gene="cysD"
                     /locus_tag="ACFMWP_000641"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HFC5891282.1"
                     /translation="MTKTEPNNVQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPAEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(20079..>20449)
                     /locus_tag="ACFMWP_000642"
     CDS             complement(20079..>20449)
                     /locus_tag="ACFMWP_000642"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HFC5891283.1"
                     /translation="VEARRECCRIRKTEPLDRAIAGADAWLTGQRREQSATRTELPFA
                     EYDAGRGIDKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCTRPVKAGED
                     IRAGRWWWEDKNSKECGLHK"
BASE COUNT         4469 a         5273 c         5866 g         4841 t
ORIGIN      
        1 tataaaatcg gcatttcgga tgtaagcaat tttgaaggca gaatgcgcca tttggaaaac
       61 aacggctatg cgaacgttgc cggattggaa cgcatcctcg ccgtcaaaac cgacaattac
      121 aaagaaaaag aaaacctgct ccatgaaatt ttcagcaaaa gcaggatagg cgataccgaa
      181 ttgttcgccg tggacgaaaa ccttgtaaaa cgtttgtttt tatcgcttcg cggcgaaatc
      241 gtgtttccga aaaacgaaac ggcggaatcg gaatttgaaa aaagcgtcca cgaacgcagg
      301 caggaaggga atgccgggtc cggccgcaaa caactgcttg atttggtacg gcgcggacac
      361 cgggaatacc cttacgcgct gccccggctt ttggcgggcg cggcatccta caagccgaaa
      421 aaatcgaaaa tccgcctttt taaagaagca tatttcggca aaagcggcac gaggctgacc
      481 gacgaaattg cagacggcat ccatatttac acctgttttt cgcgggcgga tttggaaaaa
      541 gcctattccg aatatttgga acttttcaaa tccgaatcgg atgccgaagg cagaaagccg
      601 cagtaaggtg caaacagata ccgtacacgt tgaggagcag atatgatggg cgattccgtc
      661 atttattatg tagaacaggc agacaaaccg gtaaaccgtg ccggcgaacg cgcccgcaaa
      721 acattcaaat atttttggcg cgagcttttt tgggaacgcc gccgcatcat tcccgcctta
      781 gattttgcca tggtcaaagc cccttttttc caagacggcg aagacggcga aatttgcgaa
      841 catatgtgga tcgacgatat ttattttgac ggtctttaca tttatggcgt gctgaacaat
      901 gaacccggcg aactgaccaa tgtcgaacaa ggcgaaagcg tttgcgttcc ggttgacgac
      961 atcagcgact ggatgttcgt gtgcaacggc attccctacg gcggctttac catacaggca
     1021 atgcgtggac agatgacgga agaggagcgt accgaacacg atgccgcatg gggaatcgat
     1081 ttcggcgatc ccgggcaggt attgctggtg tatgaagaaa aagaacatcc cgaaaatctg
     1141 gaagagcatc cgatgtgccg gaactgtatt gacgattttc ggcaacagtt gtcccaaaat
     1201 ccggattttc tgcatgagca ggacgaagac ggctatacgc cgcttcatca tgaagccatc
     1261 gcaggaaatg cacttatggt tcaagccatg cttgaatacg gcgcaaatcc tgcctcaaag
     1321 acatcggaag gctataccgc cctcgatttt gcccgcctgg cgggctggca aaatgttgcc
     1381 gacctgctcg aaccgcgaca ttaggcggac agttttccga aaacgaacac aaacactttt
     1441 tacagaaaga caataaaaat gcccaaaatc accgtacttc cacacacgac attatgcccc
     1501 gaaggcgcgg ttatcgaaga cgcgcccgaa ggcaaaaccg tccttgacgt gctgctcgac
     1561 catgatatcg aagtcgatca cgcctgcgaa aaatcctgcg cctgcaccac ctgccacgtc
     1621 atcatccgca aaggtttcga cagtttggaa gaaccgaccg aattggaaga agacctgctc
     1681 gaccaggctt ggggtttgga agccgattca cgcctgagtt gtcaggcggt tgtcgccggc
     1741 gaggatttga ttgtggaaat ccccaaatac accatcaacc acgcgcgcga agaacactga
     1801 aaacaggccg tctgaagccg gcacgcttca gacggcattg ttgcgcggat aaggcgcaat
     1861 cgcccgaaaa caggcgttcg tacaggcgga actttcgatt ctatagtgaa ttaacaaaaa
     1921 tcaggacaag gcggcgagcc gcagacagta ccaatagtac ggcaaggcga ggcaacgctg
     1981 taccggttta aatttaattc actatatatt gatttttatc ggttttctga cggaacggat
     2041 tggtgcggca tccgaggcgg attactcggg cgcgatgcac gggtatttat cggttttgca
     2101 gccggaaaaa ccgccggcgg gttactttca gggcggcggt cgggcggtat gccggatagc
     2161 gttccacttt cgcttctata ttgattttga ttggttttct gacggaatga tccgatgcgg
     2221 catccgggac ggcttgtgtt tcttcctgcc cgcctgccgg atattcctgt acttgcacga
     2281 aaccgaaaga ggtggcggtg cggcggacaa gctcgagata gcgtccttca agctccggac
     2341 aggcggcgga cacgctttct gccgtaaccg tgaagccgcc gcccgacccg gcaaggcgtt
     2401 ccgcaatctg cgtgtagatg cgccaacgtt gggcgcgcaa cattgccgca tcgcaaccgg
     2461 cagccgcttt atccaaggca atcagaccgc gcctgctccg gtagtgaagg caaaccgtta
     2521 ctctggagag gatatgttgc ccgtccaata tttgatacag tttgcgtatc agcagaatca
     2581 ggcggtcaaa ctcctccatc tccgacaggg aatcaggatg gtcggaagcg gtataaacca
     2641 gtttggacaa ttttgcggca aacatattgt tcatcaatct tccttgtcgg ttgaaacccc
     2701 gctcttcggg gcggtagaat cagatttgtt tgggagggac aactcctccc agatcaggac
     2761 gacacatagg ctggtgcttg atgtgttgtc cggcgagttg aaacattcag ccatcctcaa
     2821 ggtgcggcag ttttgccgaa acatattcta cacggcttca atgccggacg ataaaaggaa
     2881 attcatatga aatggaccga cacccggcgt atcgccgaag aactctatga cctgcacggc
     2941 gaaaccatcg atcccagaac cgtgcgcttt acccaactgc gcgacctgat tatggcattg
     3001 cccgaatttg acgacgaccc cgcccgttgc ggcgaacgca tcctcgaagc cgtgcagcag
     3061 gcatggatag acgaggcgga ataagtttcg ggaatgccgt ctgaaatgcg gcggtacgcg
     3121 gttcgtgctt ctgtttgcag cgggaatggt tttaccagtc tccttttttc agcctgtcca
     3181 gttggcggcg gtcgcgcttg gtcggtctgc cgtcgggata ggcggaagtg atgcggctga
     3241 attggtcgag ctgtttgcgc tcttccctca atgttgccgt tttcgcgtcc tcttcataca
     3301 gaagccgcgc ctcggatgcc gggcggcgtt ggtggttcaa acctttaacc ttgattttat
     3361 agggaaggga attgagcgtc aggtcgataa tatcgccgat gtctatggtt ttactgtttt
     3421 tgaccttcga gccgtttact tgaaccctac ccagttcgat gtgcttttgc gcaagggaac
     3481 gggtcttgaa aaaacgtgcc gcccaaagcc atttgtccag ccgcatggcg gaagaatcgt
     3541 gcttgtcttt catacgattt tgtttgaaat aattgaattt gtttcaagtt tagcataaga
     3601 tacgccgcct ataactagta tatatgcact aatccactgt tttccatgct gtccgaacac
     3661 aaaaagaggg tatggaaaag ccgttttgga caataaatta actgcggaat atgcacaaat
     3721 agcgtatgat agcggcagaa tctgttgatg agagcttcat tctatgaaac ctgttttttt
     3781 ggattttgaa caacccatag ccgaactgac caacaaaatc gatgagctgc gtttcgtcca
     3841 agacgagtct gccgtcgata tttcggacga aatacaccgt ttgcagaaaa aaagcaacga
     3901 tttgaccaag tctattttca gtaaacttac acccgcccaa atttcacagg tttcccggca
     3961 tccgcagcgt ccctatactt tggattacat tgaggcactg tttaccgatt ttgaagaact
     4021 gcacggcgac cgccactttg ccgacgatta tgcgattgtc ggcggattgg cgcgtttcaa
     4081 cggacaaagc gtgatggtcg tcgggcatca gaaagggcgc gacaccaaag aaaaaatccg
     4141 ccgcaacttc ggtatgcccc gtcctgaagg ctaccgcaaa gccctgcgcc tgatgaagac
     4201 ggcagaaaaa ttcggcttgc ccgtcatgac ctttatcgat acgccgggcg cgtatcccgg
     4261 catcggcgcg gaagaacgcg ggcagtcgga agccatcggc aaaaacctgt acgaactgac
     4321 acgcctgcgc gttcctgttt tgtgtaccgt catcggcgaa ggcggttcgg gcggtgcgtt
     4381 ggcggtcgcc gtaggcgatt acgtcaatat gctgcaatat tcgacctatt ccgttatttc
     4441 ccccgaaggc tgcgcgtcta ttttgtggaa aacggcggaa aaggcggcgg atgcggctca
     4501 ggctttgggc attaccgctg accggctgca aaggctggac ttggtcgata ccgtcatcaa
     4561 agaaccattg ggcggtgcgc atcgggattt cgggcaaacc atgaaaaacg taaaagccgt
     4621 tttggaaaaa caactgcacg aagcgcaaag catcccgctt gccgatttgc tttcgcgccg
     4681 tttcgaccgc attatggctt acggcaaatt ttcggaacaa taattcaggt agaacaagca
     4741 gcaagcagtt tgtctgaaac tgcttgcttt ttctttatcg ggacggaacc gtgctgactt
     4801 tagatgcgtt tgagcaatgc ttgaaggatt gttttcctca aggtctgaat ggaaaaaaaa
     4861 cagcggtggc attaagcggc ggcttggatt ccgtggtctt gctgcacctg cttgtccgcg
     4921 ctgggaaacg ggcaggattt gtgccggagg cattgcatat ccatcacggc ttgagccccc
     4981 gtgccgacga ttgggcggat ttctgtcaaa actattgcga tatgctaggg gtggggctgg
     5041 aaacggttaa ggtctgcgtg gaaaaaaacg gtttgggcat cgaagcggcg gcgcggcaaa
     5101 agcgttatgc cgcgtttgcc gaaaaaggct ttgacatttt ggcgttggcg caccacaggg
     5161 acgatcaaat cgaaaccttt atgctggcgg tcgcgcgcgg cggcggtttg cgcgctttgg
     5221 cggctatgcc cgccgtccgc ccttttgggg aaaaaggcat catttggcgg cccttgctgc
     5281 ctttttcgcg ccaagatata tgggattatg cccaaaaaca cggtttgccg aatatcgagg
     5341 atgaaagcaa taccgatacg gcttatttgc gaaaccgctt ccggcaccgt attttgcccg
     5401 aactttcggc gcagattccc catttcgggc gacatgtgct gaacaatgtc cgcgctttgc
     5461 aggaagattt ggctttgttg gacgaggtcg tcgttcagga ctgccgttgg gtttgcgggg
     5521 ccggttattt cgatacggcg cggtggctga cgttttcccc gcgccggaaa acccatattt
     5581 tgcggcattt tctgaaggaa aacggcattc ccgtgccgaa tcagaatgcc cttgccgaca
     5641 ttgcccgggt tttgacggag gcaaaaaccg gacgttggaa cttgcaaggc tttgaattgc
     5701 atcattatgc aggcaggctg tttgtgttcc gacaggaaaa aacggataaa ctgcggtttt
     5761 tgaaagacag gcagataagc ggaaatttaa gggaaatatt gacggggcag ggatttgttt
     5821 taaaacgtca tccgtttggg cttcctgagc atcttttgga gcaggacgga attttgagga
     5881 cggtagcggc atcggatacg ttggctgtcg gcggcatcca taaggatgtg aaaaaaatcc
     5941 ttcaggggaa acgggttttg cctgtcctgc gcccaatttg gccgcttgtt gccgacagcg
     6001 gaaaccgtcc attggcgttg gcaaactgtt gtgcggattt ccaatattcg gtttcagacg
     6061 gcattttgcc cgtccatcct gactttccca ttttattttg ataatatcgc aaacagattt
     6121 cggcggcatt cagtcgggta ttgtccggtt gcatatttct aaaaggcttg tgaagtgaaa
     6181 cacatcagtt cgaccaataa tgaacacatc cggcacctgc accgcctgtt gtcgcaagga
     6241 aagttcagac ggcagtatgc ccaaaccgtt ttggagggcg tgcacctgct tcaggttttc
     6301 ctgcaatccg gcgggatgcc ggtcggggta tatattcccg agggcaaaat gccgtctgaa
     6361 gaaatccgca ggctgagggc ggttgtgccg gaaggcagga ttttttccgt ttcagacggc
     6421 atattgaaaa aaatcagcag cttgagttgt gcagacgata tacttgcact gattgatatc
     6481 ccattgggcg gaaccttgcc ggacaaaggc gactgtgtgg ttttggacgg cgtgcaagat
     6541 ccgggcaatg tcggcaccgt cttacggagt gcggcggcgg caggggtagg tacggtcgtt
     6601 ttgggcaggg gttgcgcgga cgcgtggtcg cccaaggtat tgcgcgcggg gatgggcgcg
     6661 catttcttgt cgggcattta tccgcaggcg gatttggaaa tatggttggc gagctataaa
     6721 ggccgtgtgt ttgccaccgc cttgcgcgag gaaaagcagg tggttttgta cggcgaagat
     6781 ttgtgcgaac cgacagcctg ggtgtttggc aacgaaggcg cgggggtcgg taaagcggtt
     6841 ttggacaggg cggacaagtg tgtcaggatt ccgatgcacg atgcaaccga gtctttaaat
     6901 gtcgcgatgg cggcgacaat ctgcctgttt gaacagatgc ggcagcggtc ggcgtattga
     6961 ggaaaagaaa tgccgtctga aaaaatctat tacggcgtat tgattttctt atgtatcgct
     7021 tctatgctgc tgtcgccgtt tttttatgcg ggtgctttga agcccaagaa ggcggcattg
     7081 cggaaggacg ggcagtggaa actcatctta ttgtccaata ccgtggcggc ggcggttttg
     7141 ttttggatgt ggtggaaatg gttttgacag atattgctca aaatcgtgct aatggaatcc
     7201 gaacaaataa agaatttggt aaaaaatttg ttaaatcaac gaattaaagt tttgtggaaa
     7261 acaaaacagc tctaagcaaa tagggcgttt gtcggtaaat acggaagagt tgcggcatta
     7321 tcgggcatct ttaacaagta gtgccggctt ggcaggcaat tggtttttat gggcagtttg
     7381 caaaattgca gatataaaat tgcgaatcgg ttaaagcgtg aggataccat gaaaaattgc
     7441 aaattttttt atgatccgac aagggcaatc tatgatagcg gtgcagatta cttaactagg
     7501 gaaaaacata gattagtcgt tatcgcaaat agtgcttggg ggctattgct taatttatct
     7561 tgttattatg acgaggtttt ggaaaagcgg aaaataccgt tcggcaaaca ggaaattgat
     7621 gacgatatgg acaaagtgtc cgcccataag cggaagttta aagatatttc tgaaatcaaa
     7681 gtaggggatg gttgggaata cccgttcaat tatgagcagg gaatgaaaga attagatgaa
     7741 gtgctattga aatacattcc cttttttgaa gaagaacgat aaaggaggtt gatatgcgcg
     7801 tatctaaaat aattggaagt atgttgcttg ttacagcggt tcagaccgta ttttcggcaa
     7861 atgtttacgc gtgccgccat aatggtaaaa ccagttacag ccaaactccg ggaaaacatt
     7921 gtaccaacgc gggtttgggg cgggacctgg tgtacagttc ggtcaggcct gccgtgaaag
     7981 acagggcgga agacgcaggg gctgacgatc atttggattc ggtgagggac gaacacgtcc
     8041 aaaatccgag agagaatacg cataaggatg cttcgaatac cggtgcaaag acgcattgat
     8101 tgaaaccgaa tcagccatga cggcgttgaa taatagaatt tgaacgatta gggaactctg
     8161 atgaaacaca tccacattat cggtatcggc ggcacgttta tgggtgggat tgccgccatt
     8221 gccaaagaag cagggtttga agtcagcggt tgcgatgcga agatgtatcc gccgatgagc
     8281 acccagctcg aagccttggg cataggcgta cacgaaggct tcgacgcggc gcagttggag
     8341 gaatttaaag ccgacgttta cgtcatcggc aatgtcgcca agcgcgggat ggatgtggtt
     8401 gaggcgattt tgaaccgcgg gctgccttat atttccggtc cacaatggct ggctgaaaac
     8461 gtgctgcacc atcattgggt actcggcgtg gcggggacgc acggcaaaac gaccaccgcg
     8521 tctatgctcg cgtgggtttt ggaatatgcc ggactcgcac cgggcttcct tattggcggc
     8581 gtaccggaaa atttcggcgt ttccgcccgc ctgccgcaaa cgccgcgcca agacccgaac
     8641 agccaatcgc cgtttttcgt tatcgaagcc gacgaatacg acaccgcgtt tttcgacaaa
     8701 cgctccaaat tcgtgcatta ccgtccgcgt accgccgtgt tgaacaatct ggaattcgac
     8761 cacgccgaca tctttgccga cttgggcgcg atacagaccc agttccacta cctcgtgcgt
     8821 accgtgccgt ctgaaggctt aatcgtctgc aacggacggc agcaaagcct gcaagatact
     8881 ttggacaaag gctgctggac gccggtggaa aaattcggca cggaacacgg ctggcaggcc
     8941 ggcgaagcca atgccgacgg ctcgttcgac gtgttgctcg acggcaaaac ggccggacgc
     9001 gtcaaatggg atttgatggg caggcacaac cgcatgaacg cgctcgccgt catcgccgcc
     9061 gcgcgtcatg ccggtgtcgg cattcagacg gcctgcgaag ccttgggcgc gtttaaaaac
     9121 gtcaaacgcc gcatggaaat caaaggcacg gcaaacggca tcaccgttta cgacgacttc
     9181 gcccaccacc cgaccgccat cgaaaccacg attcaaggtt tgcgccaacg tatcggcggc
     9241 gcgcgtatcc tcgccgtcct cgagccgcgc tccaacacca tgaaactcgg cacgatgaag
     9301 tccgccctgc ctgtaagcct caaagaagcc gaccaagtgt tctgctacgc cggtggcgtg
     9361 gactggaacg tcgccgaagc cctcgcgcct ttgggcggca ggctgcacgt cggcaaagac
     9421 ttcgatgcct tcgttgccga aatcgtgaaa aacgccgaag caggcgacca tattttggtg
     9481 atgagcaacg gcggtttcgg cggaatacac ggaaagctgc tggacgcttt gagatagccc
     9541 gggcgatgcc gtctgaaagc ccttcagacg gcatcgtccg gctgcgcggc acaaaggcgg
     9601 aaaaaccgtt tgccccgtat tttcaaacgc gttacacttg ccgccgctgt tttcagccat
     9661 ttgattaccc gcaaccgccg tcattgcgcc ggcggtttgc ctgtcagcgt cattgcgccg
     9721 ctgtaaatac gaaagaacac attatgaccg tatcccccgt cgccttgcgc cgtaagaccg
     9781 agtgcaagcc tcatcccacc gcgcgctatt ggaaaaaatg cgatgtcgag gcacttttcg
     9841 gactgccgtt tttagaactt gtccatcagg cggcagaagt ccaccgccaa aatttcaacc
     9901 cgcgcgaaat ccagctttcc acgctgttgt ccatcaaaac cggcggttgt cccgaagatt
     9961 gcgcctactg tccgcaatcg gcgcaccaca ataccaatct gggcaaagag cagatgatgg
    10021 atgtggatga aatcgtcgaa aaagccaaaa tcgccaaatc gcgcggcgca agccggtttt
    10081 gtatgggcgc ggcatggcgc ggccccaaac ccaaagacgt ggagacggtt tccgcaatca
    10141 tcaaagccgt caagggcttg ggtatggaaa cctgcggcac gttcggtatg ctcgaagaag
    10201 gtatggcgga agacttgaaa gaggcgggct tggattatta caaccacaac ctcgacaccg
    10261 accccgaccg ctacaacgac atcatccata cacgccggca tgaagaccgt atggacacct
    10321 tgggcaaagt ccgcaacgcc ggtttgaaag tctgctgcgg cggcatcgtc gggatgaacg
    10381 aaacccgcgc cgaacgcgca gggctgattg ccagcctcgc caacctcgac ccgcagcccg
    10441 aaagcgtgcc gattaaccgg ttggtcaaag tggaaggtac gccgcttgcc gatgccgagg
    10501 atttggactg gacggaattt gtccgcacca tcgccgtggc gcggattacg atgccgcaaa
    10561 gttatgtccg actgtcggca gggcgcagca atatgccaga agcgatgcag gcgatgtgct
    10621 ttatggcggg cgcgaactcg attttttacg gcgacaagct gctgaccacg ggcaatccgg
    10681 atgaagacgg cgacagaatc ctgatggaaa agctcaacct gtatccctta cagtttgagc
    10741 tggaaggcga ggtcgccgaa gtggaaaaag cctctgggat taaagtggat tattgacgat
    10801 tgcaaaaatg ccgtctgaaa cccgaaaaaa ggctttcaga cgacatttgt tcggacggta
    10861 tttccaatat ctttttaccg gcgcgtgatg ttgccgtcgg gcgagacatc cagcccgttc
    10921 ccgttgggga agtcgctgcg gttcagataa ataatccgcc cgataacggt ttttcagggt
    10981 cgattttggg gattttatcg tcggcttggg taatagggat gatagttccg gaaataaatt
    11041 taccctgttt gttggtgata attttgaaaa tcggcgcaat gccgctgatg ccggaggtgt
    11101 tgattgcgcc gtaggtggca aagttgccgc cgctgtaaga gatgaagcgg tcgcggtaaa
    11161 gttcgacggc gcgtgtaacg tgcggcccct gcccgaatac gacatccgcg ccggaatcga
    11221 cggcaagccg tgcaaactcg acgacgttgc ccctgttttc cccatagaag atttcggtat
    11281 cgaacggcag gtgttccgcc tgtttccctt cccgccgccg tggaacatta caatgacgat
    11341 gtcggctttc tgtttggttt tggtaatccg ttttctaact ttggcataat cgttcagttt
    11401 gacggcggca aggttggggg cgaaggagac gaagccggat cttacgccgt ttttcttcag
    11461 gatggcggtt tcaaacctgt tttcgatgcc cgaatatttg atgttcaatt cgtcaaggtt
    11521 cgccctttat gccgtttccg caccgcaaac cgccggggtc aagccctcgg cgcatcctgc
    11581 cggaacggaa tccccgtgct gccgattgac ggttcaaacc ccgcgcccgt ttcaaatacc
    11641 ggcgatgtgg acggacagga tgcgcctgac gaaaagacag ccgataccgt ttccattatc
    11701 ggcgtgggcg acattatgct cggcagcaat tatccggtcg attacctgcc cgataccaat
    11761 attctgaaaa acgtcgaatc tgccttgcaa gacgcggaca ttaccgtcgg caacctcgaa
    11821 ggcacgctgt ttgacgaagg cggtacgccg aaaaaatgtg caacccccca aaatatgcta
    11881 tgcattccga acgccctccg catacgggca ataccttgcc gacgcgggat tcgactacct
    11941 cagcttcgcc aacaaccaca gcaacgactt cggcgcgcaa ggcatcacgg caacggcggc
    12001 gagcggcagc tcttttacat actcgatcgc gctaaagccg ctgccgataa cgaggccaaa
    12061 attgcggaaa ataccgccat cgcccagata aatttgtcca tcatcagacc tttactgttc
    12121 agacgagaca gcatttgccg cacgttttgg ggcttatctt tcgatttgcg ctacgtcgcg
    12181 caccgcgcct ttgtcggcgg aagtcgccat cgcgccgtaa gcacgcaggg ctgcggagac
    12241 gtagcggtcg cggttttccg gtttccacgc tttgctgccg cgcgcttcca tttcggcacg
    12301 gcgggcggca agctcttcat cggaaatggc aaggtggatg ctgcggttgg ggatgtcgat
    12361 ttcgacggta tcgccttcgt gtaccaaacc gatcgcgcca ccttccgccg cttcgggcga
    12421 ggcgtgtccg atggacaaac ctgatgtgcc gccggagaag cgtccgtcgg ttaagagagc
    12481 gcaggctttg ccgaggcctt tagatttcag gtaggaagtc ggatacagca tttcctgcat
    12541 gcccgggccg cctttcgggc cttcgtagcg gatgatgacg atgtcgccgg cgacgatttg
    12601 gttgcccaaa atgccttcta ctgcgtcttc ttggctttca aacacgcggg cgcggccggt
    12661 gaatttgagg atgctctcgt ccacgcctgc ggtttttacc acgcagccgc gctcggcgat
    12721 gttgccgaac aagaccgcca aaccgccgtc ttgcgagtag gcgtgtgcca cgtcgcggat
    12781 acagcctttt tcgcggtcga ggtcgagggt tttccacata cggttttgcg agaacgcttg
    12841 ggtggtgcgt acgccgccgg gcgcggcttt gaagcgttcg atggcgcggg tgttttcagg
    12901 gttggttatg tcccattttt caatcgcgtc tttcagcgtc ggtgcgtgga tagtgtgcac
    12961 gtcggtgtgc agcttgcccg ctttgtccaa ttctttcagg atggcgaaaa tgccgccggc
    13021 gcggtgcacg tcttccatat agtagtcgtg gttgttgggt gcggttttgc agatgcaggg
    13081 cacaacgcgg cttaagcggt caatgtcggc cattttgaaa tcgacaccgg cttcgttggc
    13141 aacggccaac aggtgcaaaa tggtattggt gctgccgccc atcgcaatat ccatcgtcat
    13201 agcgttttca aacgcttttt tggtggcaat gctgcgcggt aacacggttt catcgttttg
    13261 ctcgtaatag cgtttggtga tttcgacaat catacggccg gcttcgagga acagttcttt
    13321 gcggccgacg tgggtcgcca aatacgaacc gttgccgggt agggacagac cgagtgcttc
    13381 ggtcaggcag ttcatcgagt ttgccgtaaa catacccgaa cacgagccgc aggtcgggca
    13441 ggcgttttgt tcgacttcct cgacttgccg gttgctgaca ttgtcgtccg ccgattcaat
    13501 catcgcgtca atcaagtcca aacggcgttc gggctggatg tttgccacgc cgataacttt
    13561 acctgcttcc atcggaccgc cggaaacgaa gatggtcggg atgttcaggc gcatcgcggc
    13621 aatcagcatg cccggggtga ttttgtcgca gttggaaatg cacaccagcg cgtcggcgca
    13681 gtgggcattg accatatatt cgatggagtc ggcaatcaaa tcgcggctgg gcagggaata
    13741 cagcataccg ctgtgtccca tagcgatgcc gtcgtcgatg gcgatggtgt tgaattcttt
    13801 ggcgatggcg cccgcctttt cgatttcgcg ggcaaccagc tggcccatat tgtgcaggtg
    13861 gacatggccg ggcacgaatt gggtgaagga gttggcaacg gcgatgatgg gcttgccgaa
    13921 gtcggtttcc atcacgccgg tggcgcgcca caatgcacgt gcgcccgcca tattgcggcc
    13981 gtgggtggag gttttggagc ggtattctgg catagtgtgt ttccttgtct gctatgccgt
    14041 ctgaacggca aaaggctttc agacggcatt tttgttgtgt tttgaaatga aaaaaaaggt
    14101 attttatacc aagtatcgga attttgcgga atggaaacgc gtgcggcaaa aaaggacatc
    14161 ccccgcagga atgcggggga cggtttcagg cgcgcgcaat cgggacggct ttggatgcgt
    14221 cccaaaaatc gacgggcgca tccaacacgg gtttgacgat gcccgtccgt atggcgaaat
    14281 cgccgaaacc ttcgtcggta tcgcgtcccg ccgcccattt gccgatcagg tcgtctaatt
    14341 cggaaaggat ttccggcagg gtaatgtttt ctttgtagag tcgggggatg cgtacgcctt
    14401 cgcggtcgcc gccgatgtgg aggttgtagc gtccgacggc tttgccgacc agtccgattt
    14461 ccgccaacat cgcccgtccg cagccgttcg ggcagccggt aatgcgggta acgatgtagt
    14521 cgtccgacgt gccgtgtttc gccataatct tatccagctc gccgatgaag tccggcagca
    14581 cgcgttcggc ttccgccatt gccagcgggc aggtcgggaa ggaaacgcac gacatcgcat
    14641 tttcacgcag tttactgaca tcgttgcgga ttaatccgta tgttcgggca agttcttcga
    14701 tttttgcttt gtctgcttcg gcgacatttg ccacgatgag gttttggttg gcggtgatgc
    14761 ggaaatcgcc tttgtggatt ttggcgattt ccaacacgcc ggtcagcagc tgtttcccgc
    14821 cttcgtcaac caaacgcccg ctttcgatga aaagggtcaa atgccagttg ccgtctatgc
    14881 ctttcaccca gccgatacgg tcgccgcgcc cggtaaattt gaacgggcgt atgggttcga
    14941 acggcatacc catacggcgt tcgacttccg cgcggaagtt gtccaagccc atattttgaa
    15001 tggtgtagcg ggtgcgggcg tttttgcggt cgctgcggtt gccgaagtcg cgctgcgtgg
    15061 ttaccaccgc ttcggcggcc ttcagcgcgt gttccggagg cacgaaaccc agttccagtg
    15121 aaatgttcgg ataggttttg gtgttgccgt gttccatcga aagcccgccg cctgccaaaa
    15181 cattgaagcc ggcaagctgt ccgttaccgt ctgaaacggc gacgaaatcc aaatcgttgc
    15241 cgtagcagtc cacatcgttc aagggcggga tgacgactgc ggttttgaat ttgcgcggca
    15301 gataggtttt gcccaaaatc ggctcgtctt cttgaaggaa gtcgtcggaa ctttgaactt
    15361 ttttgccgtc cacccacaca tccagataac cgcgcgtgcg cggcagcaag tgttcggaaa
    15421 tctttttcgc gtattcgtaa gcctgccggt gcagttcgga ctcgatcggg ttggacgtgc
    15481 aaagcacgtt gcggttcata tccgccgccg tggcgatgga atccaaaccc agtttgtgca
    15541 agaggcggtg catcgtctgc aacttggctt tcggcacgcc gtgaaattgg aaggtttgcc
    15601 ggttggtcag ccggatggag cggtaatgac tgttttcccg ggcaaatttg tccagttcta
    15661 tccattggga cggtttgatg atcccgcccg gcagccggca gcgcaaaagc ataaatttca
    15721 agggctcgag ttttgcctcg gcgcgttcgg cgcggatgtc gcggtcgtcc tgctcataca
    15781 taccgtggaa gcggatgagt tggaagttgt cgcctttgaa gccgcccgtg agcgggtctt
    15841 tcaaatcgtc caaaatcgtg ccgcgtaaaa aattgctttc ggttttcaga cgttcgttgt
    15901 cggatagcgg tttttcttgc cacgccaaac cttttgtctt ggtctgtacg gtcattttgt
    15961 gttcctcccg attatattta atcaataaac atcacgctga tagcgttttt cttcgcgcag
    16021 catatccaaa tattcttctg cgccctcttc gtccaaatgt cctgccccga taatcacatc
    16081 cagcaaggcg gcttccacgt cttttgccat ttttgccgca tcgccgcaca catagatatg
    16141 cgcgccttcc tgcagccatt gccaaagtcc ttccgcctgt tcgcggattt tgtcctgcac
    16201 atagattttt tcttcctgat cgcgggacca ggcgaaatcg tacctgtgca ggaaaccgtc
    16261 tttggcaaac tgctgccatt cggtttgata gagaaaatca cgggcaaaat gcggattgcc
    16321 gaaaatcagc cagtttttgc cttccgcatt ttctgcggca cgttgttgga cgaaggcgcg
    16381 gaacggtgcg acgccggtgc ccgagccgat catcacaatc ggcttgcggc tgtcttcggg
    16441 cagcctgaag ccgtcgttgc gttccacaaa cacgcgcacc gtgccgtcct cttccagccg
    16501 gtcggcaagg aaacccgatg cgccgcccgc cctggcgcgc ccttcgtgtt cgaaacgcac
    16561 cgcgccgacg gtcaggtgca cttcgtcccc cacttccgcc tgcgacgagg aaatcgaata
    16621 caggcgcggc gcaagcgggc gcagtaggcc ggcgaattgt tccgccgtca gttttgccgg
    16681 gaagcggtgc agcacatcgg caatcggcgt gctttgcaca aagccttgca aaacggcgtt
    16741 gtcggcagca atacggtcga gttcgtcatc atcggcgaac ggggcatagc ctttgacaaa
    16801 ggcgggggtg ttttgcgtga gttcaaaatg ggataacagt gcggaggcaa ccggcagggt
    16861 ttttccgccc gcctgtattt ccgttgccgg atcgatgccg agcaggtcta ggatttccct
    16921 gaccagtgcc ggatcgttgt caaaccaaac gccgagcgcg tcgcccggga ggtagtgcaa
    16981 atccgaaccg ctcaaatcga tttcgatgtg gcgcacgtct ttatcggatt ggcgggcggt
    17041 gattttctga ttggccagca gggcggcggg aaaggggtct gccttgcagt acctgccatc
    17101 cggtgccgtc tgaaggccgg cggggggcgt tgtctgcggc gcgggcgttg cccggttttt
    17161 tgcggcttct tcttttaagc gcgcgacaat gcggcctgtc catccgtctg cggcggcggc
    17221 aaagtccaaa tccgcatcaa cgcgttcgag caggcgtttt gcgcccaatt cttcaaaacg
    17281 ccggtcgaaa tctttgcccg cccggcagaa attcggatag gaactgtcgc ccaaacccag
    17341 tacggcaaat tggagtttgt ccaatttcgg ggcttttttg ccgttcagca gtttgtgcag
    17401 cacgacggct tcttccggcg gttcgccttc gccctgggtg gacgtaacca gcagcaggcg
    17461 gcgttcgtcg gcgatgtttt tcgccttata gtctttcagt tcggcgcgcc tgacttggat
    17521 gccggcggct tccaggctgt ccgacgcttt gtcggcaacg gatttcgcat tgccggtttg
    17581 cgaggcggaa aggacggtta cggaaaaagg ttctgccgcc ggcaatgccg tctgaagcgc
    17641 gggcagccct gcggatgccc cgtttcctgc ttttgcccaa gcgtagccgg acagccacgc
    17701 ccattgtgcc gcgtccagcc ccgacaggag ctgcgtgatt tcgggcggca gaggcggtaa
    17761 tggcggattt gtgttctgca tatcgtgttc actcataaaa tcatacctgc cgcaacagtg
    17821 ccgtatgtcg cttcgtctat caggataaac gaaccggcgg cggtgttttc cgcataaggc
    17881 gttgccgtaa cgggtttttg aaggttgatg cggactttgg cgatgtcgtt catcttcaag
    17941 gattccgcgc cggcctcttg ttccagcgtg cggacatcta aaacgctttc aatttccccg
    18001 acttttgccg gcacggtttg cgtgccgtgc ttgagcaggt atttgcgcgc ggtgttgagc
    18061 ggacgttcgt caaaccagca aagcgtggct tccagatgtt tttgcggggc gagcggggaa
    18121 tttttatcga caaaaaggtc gccgcgcgaa acatcgatgt cgcggtccag ccggagggtt
    18181 gccgcctcgc cggcaaaagc ctgcgccact tcccctttcg gcgtgatgat ttcggacact
    18241 tcggcggtca gcccgttcgg ttcgatgcgg acggtttgcc cgacggcgac cgaaccgcgt
    18301 tcgatgcgcc cctgatagcc tcggaaatca tcggccttgt cggcatcttg gcggacgacc
    18361 agttggacgg ggaaataaaa atcggcagcg gaacgaccgg tttcgtccgc ccccggcagg
    18421 ttttccaaga tgaccagcag cggttcgccc cgataccacg gcatattgcc gccggggtaa
    18481 acgaggttgt cgcccaagag tgcggacacc ggtacgaaat gcacgtcttt caaaccgagc
    18541 tgttcggcaa gtcggcggta tgcctccaca atggcgttga atttgtcttc gctgtaatcc
    18601 agcaggtcca ttttgttgac cgccaccaca atatgcgggc agttgagttg gcggaggatg
    18661 gcggaatggc gtttggtctg cggcagaagc tgcaagggct gcgcgccgaa atccagttgg
    18721 gatgcgtcaa ccagcacgac tgccgccgaa gcggtgcttg cgcccgtaac catattgcgc
    18781 gtgtattgtt cgtgccccgg cgtgtcggcg atgatgaatt tccgtttcgc cgtggaaaaa
    18841 tagcggtatg ccacatcgat cgtaatgccc tgttcgcgtt cggcttccag tccgtcggtc
    18901 aggatggaga agtctatggt ttctttcaaa cctttgcttt tgccggattc caaggttttg
    18961 atttggtcgg acagcagggc tttgctgtcg tagagcagtc gtccgatcag ggtgcttttg
    19021 ccgtcatcga cgctgccggc ggtaatgaag cggagcgggg cctggtgttg tgccgtcata
    19081 ttttcttcct catatctgct taaagggttt ttgaaattta gaaatagcct tcttttttgc
    19141 gtttttccat tgccgcctcg cttgcctgat cgtctagccg ggtcgcgctg cgttcggaaa
    19201 tgtcggcaac cgccgtttcc ctgataatct ccgccggcgt ggacgcggtg ctttctaccg
    19261 ggcaggtgca gctgatgtcg ccgacggtgc ggaagcggac atcaaggatt tcggaggttt
    19321 cagacggcat tttcggggtg agcggcgtta cagggaccag cagccccctg cgtctgacca
    19381 cttcgcgcct gtggctgtaa taaatcggcg gcagctcgag gttttcgcgg gcgatgtatt
    19441 gccagatgtc gagttccgtc cagttggaaa tcgggaagac gcgcatattt tcgcctttgt
    19501 gcagcctggt gttgtacagc gaccacagct cggggcgttg cgccttcgga tcccattgtc
    19561 cgaactcgtc gcggaacgag aaaatccgtt ctttggcgcg ggctttttct tcgtcgcgcc
    19621 gcgcgccgcc catcagcgcg tcaaagccgt ttgcctcgat ggtttccaac aaggtaaccg
    19681 cctgtgccgc attgcgcgaa tcggtttctt tgcgtaagac caccgtgcct ttagcgatgg
    19741 agtcttccac gcgccccact atcaggcggg cattgagttt tgccgcctgc gcgtcgcgga
    19801 aggcaatcac ttcggggtag ttgtgccccg tgtcgatatg caccagcggg aagggcagtt
    19861 ttaccggcct gctgcccagc cggaaggctt tgcaggcgag ggcgagcagg accacggaat
    19921 ctttgccgcc ggaaaagagc agggcggggt tttcgcattc tgccgccact tcgcggataa
    19981 tgtggatgga ttcggattcc aaccagtcga gttggacgtt gttcggttcg gttttcgtca
    20041 tacgatattc cttatttctt ctgtttgatc cttatgaatt atttgtgcag cccgcattct
    20101 ttgctgtttt tatcttccca ccaccaccgc ccggcgcgga tgtcttcgcc ggccttgacg
    20161 gggcgggtgc aggggtcgca gcctatactg ggaaagcctt gccggtacaa atcgttgtaa
    20221 ggcacattgt tggcaaggat gtatgcccac acgtcgtgtt ccgaccagtc gaaaatcggg
    20281 ttgtatttat cgatgccgcg cccggcatca tattcggcaa acggcagttc cgtgcgtgtg
    20341 gcggactgtt cgcggcgttg cccggtaagc caagcatccg ccccggcaat ggcgcggtcg
    20401 agcggttcgg tttttcggat gcggcagcat tcgcggcgcg cttcaacgc
//
LOCUS       DAXHKG010000023        19820 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.023, whole genome shotgun sequence.
ACCESSION   DAXHKG010000023 DAXHKG010000000
VERSION     DAXHKG010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19820
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.023"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(232..307)
                     /locus_tag="ACFMWP_000643"
     tRNA            complement(232..307)
                     /locus_tag="ACFMWP_000643"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(272..274),aa:Asn,seq:gtt)
     gene            complement(400..759)
                     /locus_tag="ACFMWP_000644"
     CDS             complement(400..759)
                     /locus_tag="ACFMWP_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HFC5891284.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(782..1426)
                     /locus_tag="ACFMWP_000645"
     CDS             complement(782..1426)
                     /locus_tag="ACFMWP_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HFC5891285.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1428..1964)
                     /locus_tag="ACFMWP_000646"
     CDS             complement(1428..1964)
                     /locus_tag="ACFMWP_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HFC5891286.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1976..3073)
                     /locus_tag="ACFMWP_000647"
     CDS             complement(1976..3073)
                     /locus_tag="ACFMWP_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC5891287.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLASVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3076..4512)
                     /locus_tag="ACFMWP_000648"
     CDS             complement(3076..4512)
                     /locus_tag="ACFMWP_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC5891288.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4732..5514)
                     /gene="bioC"
                     /locus_tag="ACFMWP_000649"
     CDS             complement(4732..5514)
                     /gene="bioC"
                     /locus_tag="ACFMWP_000649"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HFC5891289.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVHLTYHPLFFIARYSAAGRQ"
     gene            complement(5502..6149)
                     /locus_tag="ACFMWP_000650"
     CDS             complement(5502..6149)
                     /locus_tag="ACFMWP_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HFC5891290.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKVSFEDYQQFPARPFDEIHQELTALFEMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6159..7301)
                     /gene="bioF"
                     /locus_tag="ACFMWP_000651"
     CDS             complement(6159..7301)
                     /gene="bioF"
                     /locus_tag="ACFMWP_000651"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HFC5891291.1"
                     /translation="MNVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEQLVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKGTSRIRLSLTADMTMDEVRQFAVCL"
     gene            7524..8600
                     /locus_tag="ACFMWP_000652"
     CDS             7524..8600
                     /locus_tag="ACFMWP_000652"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HFC5891292.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8807..10273)
                     /locus_tag="ACFMWP_000653"
     CDS             complement(8807..10273)
                     /locus_tag="ACFMWP_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC5891293.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10471..11394)
                     /gene="speB"
                     /locus_tag="ACFMWP_000654"
     CDS             complement(10471..11394)
                     /gene="speB"
                     /locus_tag="ACFMWP_000654"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HFC5891294.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11493..13385)
                     /gene="speA"
                     /locus_tag="ACFMWP_000655"
     CDS             complement(11493..13385)
                     /gene="speA"
                     /locus_tag="ACFMWP_000655"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HFC5891295.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYASTVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13552..13836)
                     /locus_tag="ACFMWP_000656"
     CDS             complement(13552..13836)
                     /locus_tag="ACFMWP_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC5891296.1"
                     /translation="MKKLLLAAVVSLSAATAFASDSAERQIYSDPNFEQNRVKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13987..15795)
                     /gene="aspS"
                     /locus_tag="ACFMWP_000657"
     CDS             complement(13987..15795)
                     /gene="aspS"
                     /locus_tag="ACFMWP_000657"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HFC5891297.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYAEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAE
                     NGDIIFFGADKAKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15853..16554)
                     /locus_tag="ACFMWP_000658"
     CDS             complement(15853..16554)
                     /locus_tag="ACFMWP_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HFC5891298.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16697..17824)
                     /locus_tag="ACFMWP_000659"
                     /pseudo
     CDS             complement(16697..17824)
                     /locus_tag="ACFMWP_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236077.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
     gene            complement(18005..18268)
                     /gene="rpsT"
                     /locus_tag="ACFMWP_000660"
     CDS             complement(18005..18268)
                     /gene="rpsT"
                     /locus_tag="ACFMWP_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HFC5891299.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18571..19713
                     /locus_tag="ACFMWP_000661"
     CDS             18571..19713
                     /locus_tag="ACFMWP_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HFC5891300.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LTPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5108 a         5107 c         4596 g         5009 t
ORIGIN      
        1 agaatcgttc tctttgagct aaggcgagcc aatgccgtac tggtttttgt taatccacta
       61 taaaatcgag tttatcctag ttgtccagga cagcccctat tttttcataa ccatcacgaa
      121 aggaattttg caaagatttt attccatctc aaaacaatca tctcaaaaat gcgtttctga
      181 ccgccggtaa aacaaaaccc tctaagaaaa tacttagagg gttttgaaat ttggctcccc
      241 gacctgggct cgaaccaggg acctgcggat taacagtccg tcgctctacc gactgagcta
      301 tcggggaata agcgcgaata ataaaacaga aataccgaac gtgtcaatat aaattgacaa
      361 tcgattgcac tttatctgca agcccgcaat ctttatatgt tatatggctt ccgcaatatg
      421 ccttgccgca cgtttggcat ccaataggat taaaccaagt ctgccggttt cttttgccac
      481 cagcaccaac acggcatctt tacccgcctg acttaaaagg atatagcctg attttccttt
      541 aatcatcact tgttccaatt ccccgcaggc gagttcctgc accgagcgac tccccaaagc
      601 aagcaaagtg gcagaaatcg cccctaccct gtccgaattc aaatgtgaag gaagcattgt
      661 cgccatcggc aatccgtcgg ttgagataac ggcagacgcg ataatatccg tagatgtatt
      721 gtttaaatct tcaaggattg aaatcaataa ttgctgcata acccctcctc tctcccaagt
      781 tttacacgcg gttgctgtaa cggcggtata aaatccttac caaagtaaca aatgcctctt
      841 tgcccaaatc gggaatgccg ccgataacca aaataaattt ggttgaaccg atatacaatg
      901 ggaaaaatgt caattcgctc tgaccggaag gatcgcaaac gccccaagcg ttattgttga
      961 tatacaggtt gttcttaatc agcagccggt atttcttttc catctgtgcg acttctgccg
     1021 ccaacaaccc caactcttcc gccgcctcat gatggaaatt ggcgttggca agatacagac
     1081 cgttccgatc gaccaataac gccttaccgc tgccggacaa ttgttccatc agcaacggca
     1141 attgctcgtc cgacaaattg atgccgtctg aatgaccgtt ttcatcgcca tagaggaatt
     1201 cgagtttttg caaacggtac aacaggttca aagcggtatc gatgtcggcg gtgtccgccc
     1261 aggtaagcag cttctcactg ctgaccattt cgtccgcatc cgctttcaac aggctgtgca
     1321 acaaagtttt accggcactg ggggcatcgc tggatacggc ataaaatgca ccggcaggag
     1381 tcaggcgggg atataaattt gcttgtagtg aaagtgttga ttccatatta aacctccagt
     1441 cccggatcaa tagaaaataa cattgcgcta accaattgtt ttacgtcatc ttccttacgg
     1501 gcatcaattt caaaaaccgg aacattaaga ttatgttttg caagatattt gtgatacacg
     1561 tcgataccgg gctgagagcg tatatccatc ttggtaatac cgacaacgac gggtgccttc
     1621 tccagcagcc ctcgaaacga atgtaaaaag aattccaaat ctttcaacgg attggttcgg
     1681 gcattatcta aaagcaagac caaacccata ctgccttggc ttaagatttc ccacataaag
     1741 ttgaaccgtt cctgaccggg cgtaccatat aaatggactt tggtatcctc atccaagctg
     1801 atggccccgt agtccatcgc cactgtcgta ttccttttcc tatccaaagt catatcggat
     1861 gcggaagcat cggtctgaac gagtgcttcg tccgaaatag ccgcaatggc agtggttttc
     1921 cctacgccga caggtcctgt gaaaataatt ttattttctc tcatctctcc gcctcttagc
     1981 tgcccaacag ttttttcatc agcctttgca gaaggccgcg cgactgggat tgggatggtg
     2041 ttgtgatttt ttccgctttt ttcatcattt cactatcaga ggcagaatcg gctccgatat
     2101 ttattttatc cgccatatcg gagtatgcct gttgtgaaac cgtttttaaa tctaccgaca
     2161 aaaacccggt tgtataggtt gccgcaagat aattcagaat atcattgagg tttaaaggca
     2221 tcactttata caacacgtta aggttgacgg atgccttggt cagaaatgcc gacaagcgta
     2281 tcgaccccgg cacacttgcc aaccgggtca ggtttggcca agatttcaac gtaaacggag
     2341 tatcgggaga aatcggataa atcaacctgc cctgcgccgt ccaaatggaa aactgccaca
     2401 tacaggacat aatgcctact ttagcctttt cgcgccattg cgggttatcg ggaacagtct
     2461 tgcagctgac ctgcaaattt tcgtctttgc acaattcttc gagtttttgc acactttctg
     2521 tcagcaaaac ccgttgtatc gaggggaaaa caataaggac cggcttattt ccatgcaaga
     2581 tagcgatgtc ctgcctgttc ttttccgcaa accgcaacgc ccccaataat cctttattcg
     2641 ggttaaactg gcgtatcgta accgtacgct gcacattccc gttatttttc gccgaccggt
     2701 ctgcgggtgc aataaacgat ttcccataaa cattctcgcc ctgcaacaat ttgcggagca
     2761 taggaaacaa tgtttcaaac cgaatcggtt tgggcaggta gggaacttca gaatcgggaa
     2821 ctttctccga acagacggcg acgggtatat ccttataacg ctcggcaagc tctttccaaa
     2881 gttcaaaacc gccctcggca tcggtatccg ccaaaaccaa atcgggcacg gcactgccgt
     2941 ctgaagggga tactgtttca taacgggtgg tattgtgcat tttgaatgcc attttgaaaa
     3001 cggattcctg ctgcgccgtc atccccgcca acattacgcg tactgtttta attttcggca
     3061 gttgaacttc catttttatt ttccgtaccg ttttattttt ttaatatttt gattcatacg
     3121 ctgcagcagc cggctcatca gcataacgac ctcttcagga agcctgtccg cacgttccct
     3181 caataccctt aaaaactgcc ccaacctatc ccaatcttca gtacgttcat aaatatcgat
     3241 caacgtaata taaagctggg actcgtcggg atatttcaat accgcctgct ccaacacatc
     3301 cattgccgct tcaatctgac catacatcag caacgactct acttctttaa ccgcatcgtc
     3361 tgccggagac gaaccggtgt tgatcaacga agaatcttga agcaccaaat cccgatgttg
     3421 cgatttgaat ttctgtatat ttttcggcag atacccgtgc cccataccga tgtctttgat
     3481 ttgccggtcg ttcggccctt tttccaaatc atcgaaaact tcatggtaac ccaagctgta
     3541 cccccacccc agcatccgct ctttaacctg cctgccgtag ttgcccaacg tttggtaaag
     3601 tttccacaaa tgtccggcaa aacggtctat gtccgcgtgt tggtaatcga gtttcaacgc
     3661 atcgataatc aggtttgcag gtttttcgga agtttggatg gcacggtcgt attgtttcga
     3721 tgccgtttca tagctgactt tgtctttaag gattttcgca ccttgatcgg cacggaccaa
     3781 accggcaatc gcaccgattt cctcttgact gattccggac acgtcttttt tgccccgcac
     3841 aatcgggatg cgcttgattt cttcggcttc ataagcctta ccgccggcat ccggcggggg
     3901 cgatgcggaa gctgccgtcg cagaaccgcc ttccgcacgt ttttcaatct cctgagtacc
     3961 ccatcccaaa ccttcttccg ccaagacgcg gatacgcaaa tggtttgaat cgcgctgtaa
     4021 tgcctgttcg atatattttg ccaaaagttc ggaaggaatc agtttgccgt atttttgcag
     4081 attgtctgcc aaaacatcga catcccccac ttcgagattg atatcgagca gctcgcggat
     4141 aaggttttca ggtttcgctt caccatccgg aatgccgtcc agataggcag ccaaagattc
     4201 ggcagccttg ccctgataac cgaattgctt ataaacctga tactccgtaa gcggatcgac
     4261 ttcttgcgcg gatacggcgg cggatgcggt ctcggcactt tcgttccaag accagtcggg
     4321 ttgcgtgccg tctgaaaccg attgtccaat ctgatcgacc cagtccgaat cattgcttcc
     4381 gggtgtctgc ccctgcgtat tgccgacacc ttgggatttg cgcttcggtg ttttcttacc
     4441 ctgcttcgca cgcataacca aaagcatcag caataccgcc agtgccaaac cgataattaa
     4501 tgagttttcc aaaggatact cccgataccg taacgagcgg atagctgacc gcctgcaacg
     4561 gccattgtcc gcttttatta ttaacgattt actgaaatag acttgtaagt tttaaatcat
     4621 accataattt aacgtttaac aatatgcctt ctgcacaagc ctcgccatat taccttttac
     4681 ccacatcagt atcaataccc gatataaaaa taactttgcc cataagctgc cttattgcct
     4741 gcccgccgca gagtagcgcg cgataaaaaa taacggatga taagtcaggt gcactttgcc
     4801 cgacggcata ctgaacgccg acaaataatc gccaataaat ccattgagat tttttcttgt
     4861 ccaatttttt tggttcgtgg ctgttacgcc tgtatattta aggtgtttga gtacatctaa
     4921 cggcgtatca aagtctagta ttaccttaaa atcctcacac cataaaagct caaaatcttt
     4981 ggctaaccaa gtctgccatt gggataaagt cgggtaattt aagcctatat ttgtaatttg
     5041 gcggacttct tttaaattgt ctttgccaaa ggttgcaacc gccaataatc cgtttgcttt
     5101 caagcctgtt ttgcaatggg cgataaaagc gtcgggttga tgaaaccatt gcacggcaga
     5161 tgcgcttgcg attaagtcaa attgtcgttg aaaaggaaag ttttccgcat cgccgcaata
     5221 aaaatcaaag gattgcggca gtttttcagc cagttggggc tgcacatcgc acaaatcatt
     5281 aaataaccaa taattcgctg aaatctgttt ttgcagcaag gcactcaaca ttcctgagcc
     5341 gcagcccaat tccaacacgt tttccaatgg catatccggc aaataatctt gcaaatgcgc
     5401 cattaaatta atcgtcattt tttgttggat taaggcgtgc cggtcataat cgtttaatgc
     5461 tttttggaaa gcctgccgaa tgcgcgattt atttatggca gtcagtgatt ccatagtgcc
     5521 gaccaatggg tgaatcttga aaacaggtaa tgtccgccgt caatttcccg aacggtgcaa
     5581 cgcggtgtcc aatatcggtg ctgattggca ggcataaaaa ttttatcgcc tgatccgacc
     5641 aaggcatttg tccagcgaat caaatctgcg cgcctatctt gcccgatcat ctcaaaaagt
     5701 gcggtaagtt cttgatgaat ttcgtcaaac gggcgtgcgg gaaattgttg gtaatcttca
     5761 aaagatactt tatcgccaca cattctgcgt tcaaatttta aacgggtgtt ttccgtgagg
     5821 ttctccaatg tgcctttaaa aacggcgcaa gggataccga aattatcatc gcaaggcaaa
     5881 cctgtgccat tcactgccgt tgcggatttt aatcttattc cttgcaatgc cctctctgcc
     5941 gcccaaacgc ccattgacca cgccaccaaa cggatgtgcc gataggcgga aaaatcaaaa
     6001 tccaaattta aatcttgata atcgtagcaa atcaataaat cgtgattttc cggcaaaatc
     6061 aaatgattta cagcatcggg cggcgttccc caacctgcaa aatacaggat taaatgtccg
     6121 ccttgatgat tgtaaaattt tgttttcata tcatatcctt acaggcacac cgcaaactgc
     6181 cgcacttcat ccattgtcat atctgccgtc aaagacaatc gtattctgga tgtacctttt
     6241 ggtactgtcg gtggtctgat gggcaggcaa taataaccct gcctttgcag gtattccgct
     6301 ttggcaaggg tggcttcatt cccgcctaaa atatagggga cgatacaggt ttggctcggc
     6361 attatttgcg tccgatgcgc cacttcccgc cgtaaaaatg cgcttaactg ctcaagatgg
     6421 cttctttctt ttgagaattg cggcaatcgt tcaaaaataa aataagtcca agccacatta
     6481 aacggcggca atgcggttga aaaaatcaat gggcgcattt gattaatcaa acattctttc
     6541 aatacttggt tgcagacggc atacgccccc accgaggcta aggctttacc gaaagtgccg
     6601 accaataaat caatctcggc aatcaaatta tcccgttcgg caatccccaa tccgttttgc
     6661 ccataaacac cgattgcgtg ggcttcatcc acataaagat aagtattggg aaactgtttt
     6721 tttaattgga caagctgttt caaatccgcc acatcgccgt ccatactgaa aacagattcg
     6781 gtaacgataa aagtgcggtc aaattttccg acgttttttt caagcagatt tttcaaatgt
     6841 tcataatcat tatgacgata acggaaaaac gcacaccggc tcaaacggat gccgtcaatc
     6901 atactggcgt gaacaaattt atctgccaaa atcaaacttt tcgtcgtcgt caaagcaggc
     6961 aaaataccga gattggcgtg atagccgctg ttgaacaata acgcgctttc ccgttggaaa
     7021 cgttgtgcga caagctgctc aagatcggta taaataggaa agttgcccgt taataaacgc
     7081 gatgaagaac tggtaaaaga gggaaaatta ccgccgtatt gctgcaaaaa agaccggcgc
     7141 aagttttcat ctgatgccaa acccaaataa tcattagacg acatattcag cattttgcgg
     7201 ttttcccgcg taatataccg cccttgatga atcaaatccg gaatcgaacg atattggttt
     7261 tgcgcgccga gttgttcaag ctgttgttta aaaacattca ttatgatgta aatattcctg
     7321 agttaaagcc tgaaccaacc cagcatcaaa caatcaagta atgccctttt aataaaaacc
     7381 gttttgccgc cgacctttgc cacacccctg ctttcataat ccaaggcgga aatttccgcg
     7441 acatttgttt ccgttgccat tacccaatcc gtccgcactg taccgaagcg catattttcg
     7501 cacaaattgg tacggtttca ggtatgattt gccgaaaacc tatcggacac acaccatatt
     7561 ttgatatgaa taaaacaatc tgccgcactg ctgcactatt gataagcggt ttttcatacg
     7621 caaacaccgt cattcccgat gtctcccccg tcgcacaagg tcaacatgtc ttcattaaca
     7681 tccctcagca acgcctgttc ctctacaccg acggcaaact gaccaaggtt tatcccgttg
     7741 cagtaggtcg ggcgatgacg caaaccaatc taggcgaaca taaaatcggt gcgaaagcct
     7801 ataaccctgt ttggtacatc cccaaatcca tacagaaaga acgcggcgac ggcgtaaaaa
     7861 ccatagccgc cggcccggac aaccctttgg ggccggtttt tgtccgctta ggcgacccca
     7921 aactcggttt gggcatacac gggaccaatg cgccggccag cgtccccggg gttcggagtc
     7981 acggctgcgt ccgcatgaaa tcgcccgacg cgctcgagtt tgccaaaacc atcgccagcg
     8041 gctcgcccgc ctccgtcatc tatcaaatgg cgggtctcaa tgaagatgcg gatcgcaacc
     8101 tgtggcttgc cgccttccgc gacccttacg gtaagaacaa ccttgacatc gcctctctga
     8161 aaaaaagtat tgcgcaatgg gcaaaaacac agggtaaaac catcgcgccc gagaaagtcg
     8221 atgctgtact caaagaccgc accggatcgg ccgtctgcct gacctgcggc aaaaacggca
     8281 agatgaagat gccgctcaaa tcgctggcgt ggatacaggg ttcttcctca tacagccaag
     8341 ctgaagtcat tgaacaaact gaggaaacca actctgccga aatatccgag acacgcacgc
     8401 ccgaagtgcc tgatgtacac acgcccgagg cacaaccgca tttaaatacc caatccgacg
     8461 gcacgccgac tgcctatacc gaaccggctg ccgattcatc gccgcaagta gaaacacctg
     8521 atcaggctgc ttccgagccg gttgatgtat tattttcaat agatgtgata cggcagggaa
     8581 atttgcgttt aggtaattga ataaccttct gattatttaa tgcttatgtt tatcagaagt
     8641 tgataggcgg tttggttttt gtttggcttt tcctacaccg ccgcctgccg ctttctgcaa
     8701 cattcaagcg cacaaatatg ccatctgaag gctttagacg gcatatttca cgataatagt
     8761 cgcccaatca aataaacaca gattggaaat ttattttatt tttcccttac caatacccca
     8821 gaactttcca ccaaatgctg ccgataacga aaaaaatcag aaaattgact acgctcatga
     8881 taaaacccgc cttccaccat tctcccattg tggtgtagcc cgaaccgaaa atcacaggcg
     8941 aagtaccggt cgcataatga gtgagggtca tcataatgtt agatgcggcc gccatcatca
     9001 gcgcggtcgg catcgccggg gcattcagtg aaacggcagc agcgaaaaat gcgccgaaca
     9061 tagcggtaat atgtgcagta gtactggcaa acatataatg cgcatacata taagcaagca
     9121 cgaggattac gcccgcagcc gtgccgctaa cgcccaaacc gccgacactt tccgccaaca
     9181 ctccggagaa ccatttaatc agtccgagtt tatttaaaaa tgcggccatc ataatcaatg
     9241 cgccaaacca aataatcgta tcccacgcac ttttttcttt caaaacatcg tcccaagtca
     9301 atacaccgga aagcaaaagc aggcttaatc cgataaatgc ggtggcggtg gcgttgatac
     9361 taaaagcgtg attgccggta ataagggcgg gaacatctgc ccacaacagc agcaagatac
     9421 cgaaaatgac cgccataatg atttcgtctg ccgacatttt acccatctcc ctcagacggt
     9481 ctttggcaaa ttgaacggca ttgggcgttt ctttaatttc aggcggatac aaaaaatata
     9541 aaatcaaagg cataacgaaa aaggcgataa cgccgggaac agccattgcc cacgcccacg
     9601 ccccccaaga aagacggaaa ctactgccta aattttcggc aatcaagttg acgattaaag
     9661 ggttgggggc agttgcagta ataaacatag ccgacgaaat gggattggaa tgatagttga
     9721 ccaaagccaa atatttaccc atcttgcctt ctgtgccttt tgcgggattg gagccgtaac
     9781 tgccggcaat cgactgcata atcggatgta taatgccgcc gccgcgcgcg gtattggaag
     9841 gggtaacggg agccagcagc agttcggaaa gagcgagact gtaaccgatg cccagcgttt
     9901 ttcttccaaa aacggcgata aacaaatatc cgatacgcat ccccagccct gttttgagca
     9961 aaccgcgcga aatcataact gcgatggcaa tcagccaaat caacggattg gcgaacgcac
    10021 tcaacgcatc gctcatcgcc gcgcccggtt tgtcggcggt tacgccggtt actgcgacca
    10081 acccgacggc aataatcgac agcgcgccca acggcatggc cttgccgata atggcggcaa
    10141 tcacaccgac aaacatggcc agcagcgtcc aagcctgagg cttgaccccg tcgggtacgg
    10201 gcagtgccaa aaccagggcg cacaatactg cggcaatggc gaggggtatc ggtttgaaac
    10261 ccaatttcat catattgacc tccgtaaaaa agaccgtccc gaaaaatcgg aaaaataata
    10321 tttaactaat tgttttataa tatatattca gatatttcac cgtctttccg atatgcggct
    10381 ccgggcaact tttgtttcag tatttgaatt ttcattagac tgaatacgcc gtttgaacgg
    10441 cacggcgaaa acccggggga tgccggacgt tcagtccttt ttcgcacctt gaaggtaaag
    10501 catttccaag gcaattgtgg cgccggccaa agcggtaatg tcggattggt cgtaagaggg
    10561 ggcaacttct acaacatcca taccgacgat gtcgagatcc gtcagcccac gtaggatttt
    10621 taatgccctg tcgctgctca agccgccgca tacgggcgta ccggtcccgg gggcgaacga
    10681 cgggtcgagg cagtctatgt cgaaagtcag gtaaacgggc atattgccga cggtttcttt
    10741 gattttacgg acggtctctt caacactgtc ttcattaact tggggggcgg tcaacacagt
    10801 aaaaggcaat tttttactgt gttcggtacg tatgccgatt tgtacggaac gggacgggtc
    10861 gatgaggcct tccttggggg cggtatagaa catcgtaccg tggtcgtatt cgctgccgtt
    10921 gtcgtaggtg tcggtgtgcg cgtcaaaatg aatcagtgcg agtttgccga aatagcgggc
    10981 gtgggcgcgc aacaacggga gggtaatgaa atggtcgccg cccaaactca aacagcgttt
    11041 gccggaagaa agtaatttgc cggcgtgcgc ttccattttt tcgacaaaat ccctgctgtc
    11101 gccaaaagaa aaaaccaagt cgccgcaatc aataatgttc aggcgttcgc gcacatcaaa
    11161 tgtccatgga aacctgcggt gctcccaagc gaggttgacg gaggcgcgcc ggatggcttc
    11221 aggaccgaaa cgcgcgccgg aacgccctga aaccgccata tcataaggca cgccggtaat
    11281 aacccaatcg gcatgacttt catacggcat aaaattaagc ggcaggcgca aaaacccgaa
    11341 attattggaa acgagggagt tgtcggtttg tcctgccagt gtgctgtatt gcatcgtaat
    11401 gattccttgt aattggtttc aatcggtcgt gatgattggt gtttgagtaa gaaaatcggg
    11461 cttcagacga catatccgat gccttgatgc gtctattcgt cttccaaata ggtataacca
    11521 ttaagccccg cttcgagttc ttttaagaaa gacatagcct gcgaggcagg aaggtctgaa
    11581 tgttcgattt gttcgcgata gcgtttcatc agctctttcg gatcttgata aacgtattcg
    11641 agcatatcgg caacggtgtt tccttcatcg taatcgatga cggtaaattg tccgtcttcc
    11701 cctacaacaa catcggcagt ggcagtgtcg ccgaaaagat tgtgcatatt gccgagtatt
    11761 tcctgatatg ctcccaccat aaaaaagcct aaaagcggcg gctcttcttc gggataatca
    11821 ggcataggca tcgtaccggc gatgccgtct ccgtcgatgt agtggtcaat cgtaccgtct
    11881 gaatcgcagg taatgtccaa caacacggcg cggcgcgcaa tcggttcatt caaaccggta
    11941 atgggacaaa cagggaaaag ttgatctatg ccccaagcat cgggcaaaga ttggaagagt
    12001 gagaaattga catacagctt atcggcaaaa cgttcttgca attcgtcaat aatggttcgg
    12061 tgagaccggt gtttttcatt aaacaattcg ccgacttcat gacagatatt taaatacagt
    12121 tgctccgccc acgcacgttg cgccaaactc aacagcccga cattatactg attatgcaca
    12181 tcggcaagat caaactgccc ttcgtgtatc cagctgcgta aggaacgttt ttcccgcgag
    12241 gcggaaatat ccgtccaagt ttcccacata ctgtgcaaca cacgcggtgc ttcgggcgat
    12301 ggcgcatcca gccggcgcgg tttgtaacgt tcaacgccta taacattagc aaccaaaacg
    12361 gcgtgatgtg cggtaatgcc gcgcccgctc tcggtaatga ttgtcggatg cggcagcccg
    12421 tgttcgagac aagcctggct gatgccccat acgactgtgg aggcatattc gttgaggctg
    12481 taattaacgg aacaatccga ttgtgtgcgg tttccttcgt aatccacgcc aagcccgccg
    12541 cctacatcaa aacagcggat atttaccccc agtttgtgca actcaacata aaaccgagcc
    12601 gattcgtgta cacctgtggc aacatcacgg atgttcccaa gctgcgagcc taaatggaaa
    12661 tgcaaaagct gcaggcagtc cagcctgttt ttttgtttca aaatatcgac cagttgcaaa
    12721 acttgggaag ccgacaagcc gaattttgat ttttccccac ccgaagactg ccattttccc
    12781 gaaccttggg aagccagtct ggcgcgcaca cccaaacggg gcttgatgcc gagtttttcc
    12841 gcctcttcca ataccatttg tatttcggac agcttctcaa tcaccaaata aacctgatgc
    12901 cccagttttt cgcccatcaa ggcgaaacgg atatattcac ggtctttata gccgttgcag
    12961 acgattaatg tttgccgggt gccggcgtgt gccaaaaccg ccatcagttc ggctttagaa
    13021 ccagcttcca aaccatgcgg ttgtccgctt gacataagcg attcgatgac gcggcggtgt
    13081 tggttgacct tgatagggta aaccaaacaa taaccgccct tatagccgca ctcttcccgt
    13141 gccgtctgaa aggcgcggtt aatgtcgcgg aggcggtgtt cgaggatttg cggaaaacaa
    13201 aacaaaacag gcaggcgcgc ctgatgtttt tgttgcacgg cttcagtcag tttttgcagt
    13261 gaaacagttt gattgtgttg cgagggattg gggcggacga tgatttcgcc ggaatcgtca
    13321 acatcataat aacctatgcc ccaatgatta atgttgcaca cttcacggat ggtaaggata
    13381 ggcataataa acctgctccg tctgtcgtgt tgaaaaggaa tgattataac aaatcagcgt
    13441 gaaatgtcat ttttttaata agaaaagcct gcctcatacc tgatgaggaa caggcaaaat
    13501 gccgtctgaa cgcttcagac ggcattttgg ttcatctttc catcaaagga gtcagcgatc
    13561 gagctgctct ttgatgattt tcaggtcggg gtaagacaac acgatgtcgt attcgcggcc
    13621 gtctttatag gcttccactt ccagcacagg cttaccccaa tggtcgtcgg catcgacatc
    13681 gtgaacctga taaccgcgct gttccaacat tttcacagct tttacgcggt tctgttcaaa
    13741 attgggatca ctgtaaatct gacgctcggc agagtcgctg gcaaatgcgg ttgcggcact
    13801 cagggaaaca acggcagcca ataacagttt tttcattttc agtcctttct ttatcggttg
    13861 attgaataag atgtgttttt caatgccgcc attaaaacac agcaaaatta ggtttgaatt
    13921 agagggaagt caagaagcgt aaatgccgtc tgaaaaaaac agagccgtca aacggctccg
    13981 ttttccttat gcttctttgg tttcagccgc cttttggcgc aggcgcaggc tcaattcacg
    14041 caactgcttg tcgtccacgc tgttgggcgc gttggtcagc aggcattggg cacgttgtgt
    14101 tttcgggaag gcaatcacgt cgcggataga ttcggcgccg gtcatcaggg taaccaaacg
    14161 gtcgaggccg aatgcaaggc cgccgtgagg aggcgcaccg aatttcaggt tgtccaagag
    14221 gaagccgaat ttctcttgtt gctcttcagg gctgattttc agcgcggcaa acactttctc
    14281 ttgtacgtct gcacggtgga tacggataga gccgccgccg atttcccagc cgttcaatac
    14341 catgtcgtag gcacgtgcca aacaatttgc cgggtcggaa accatcaggt cttcatgacc
    14401 ttcttttggc gcagtaaacg gatggtgtac ggcaacgtag cggtcggctt cttcgtcgta
    14461 ttcaaacatt gggaagtcga caacccacaa aggtttccat tcgtctgtga aatagccgtt
    14521 ttccgcgccg tgttccaagc cgactttgat acgcaatgcg ccgatggctt cgttcacgac
    14581 tttggctttg tccgcaccga agaagatgat gtcgccgttt tccgcgccgg tacgcgcaat
    14641 gatttctttc agggcattct cagacaggaa ttttacgatt ggagattgca ggccgctgtc
    14701 ttcgccgttt gagaggttgc ccacatcgtt tactttgatg tatgccagac ctttcgcgcc
    14761 gtagatgccg acaaatttag tgtattcgtc gatttctttg cggctgaatt ttgcgccgtt
    14821 cggtacgcgc agggcgacta cacggccgcc tttcatatct gccgcgccac ggaagacttt
    14881 gaattcttcc gttttcatca ggtcggtcaa ctcggtaaat ttcaagttga tacgcatatc
    14941 cggtttgtca gagccgtagt agaacatggc ttcggcgtaa ggcatacgcg ggaagtcgcc
    15001 taaatctacg tttaaagcat ctttgaagac ttgtttcgcc ataccttcgg tgatgtccat
    15061 aatttcatcc tcgttcaaga acgaggtttc caagtcgatt tgagtgaatt caggctgacg
    15121 gtcggcacgc aagtcttcgt cacggaaaca tttggtaatt tgatagtaac ggtcgaaacc
    15181 ggccaccatc aacagttgct taaataattg cggtgattgc ggcagcgcga aaaactcgcc
    15241 cggatgaacg cggctcggca cgaggtagtc gcgcgcgcct tccggagtgg agcgggtcag
    15301 catcggcgtt tcgatgtcga tgaagccttg cgcgtccaga taacggcgaa cgcccatagc
    15361 gacttgataa cgcaggcgca ggttgcgttg catcaccgga cggcgcaagt cgataacgcg
    15421 gttggtcagg cgaacgtttt cgctgatgtt ttcatcgtcg atttggaacg gcggcgtggc
    15481 ggcggcgttc aagacttcga tttctttggc aaggatttcg attttgccgg aaatcatttt
    15541 gtcgttggtc gtaccttcgg gacggttgcg tacgcggccg gtaatgctca aaacgtattc
    15601 gttgcgagcg gaatcggcag cggcaaacgc ttcgggcgtg tcggggtcaa tcacgacttg
    15661 gacgatgcct tcgcggtcgc gcaggtcgat aaaaatcaca ccgccgtggt cgcgccgacg
    15721 gtgtacccag cctttgacgg taacggtttg gtctaagtat tgctcactga tcagaccgca
    15781 atagttggta cgcataaaat caccttttat tgatttaaac tgaaaacaga aaatgccgtc
    15841 tgaacggcgg ctttattgtt gttcgggcaa atccgccttt tcagacggca taggtcctgc
    15901 caatgttttg acgggcaggt cgtcagggat gaccataccc agcgaaatca catatttcaa
    15961 cgcttcgtcc acgctcatat cgagttcgcg cacatcgctt ttctttacca taatatagta
    16021 accgccggtc ggattcggcg tggtcggaac atacacggaa agataatcgc cgtccttcgg
    16081 caatgcggcc ttaaccgcat tcgacacctg accggacacg aatgcgattg tccaaatacc
    16141 cgattgggga aacggcacga gtactggtgt tttaaacgaa cggctgctgt cggacagcaa
    16201 cgattcggat acttttttca cactcgaata gatggacttc acaaccggaa tccgccccaa
    16261 caagctgtcc cacgcggcaa gaatctgccg gcccaatacg tttgcggcaa acaatccggt
    16321 tacaaacaat acggcaatgg caacgataac gcccagcccc gggatattaa accccaaaac
    16381 atattgcggc cgccattgct tcggcagcag gttgacgagc tgatcggacg cggaaacgat
    16441 ataggaaacc acccaaaccg ttaccgcaat cggcagccag accaaaatgc ccgtaatcag
    16501 atattttttt aacgccttgg cagctttacc gccttcggcc gcaggttccg tcatcttgct
    16561 tgattccgac aaagtccgta caaaccgcac attatacgcg tttgcccgga ttcaaacgaa
    16621 atttttatcc cgccccgcca aaccgccggc ggcttcagac ggcacggcaa cttgatatac
    16681 cgtctgaaca cgcggttcag atgccgtcca agtcgttgaa catcaacccg ataccgatac
    16741 cgttctgctt gtggttgtag tcgatcagac tctcgccgta accgtggaat ccgcgtacca
    16801 cgcctttgag tttgccctta atcggaaacg tgtaggcggc ttcaatcgcg ccgtagcccg
    16861 ttttggggtt gtagcgcaat acggaataca cattctgcct gtcgttcagg cggtactgca
    16921 gcttcacgtc gccatacccc atatagtcgg caatatcggg attgtcgttt ttatcgccgc
    16981 tctgatcgaa cgcacgcacc cacacgcgcg gaatcaccgt caatttgccc cattccatgc
    17041 ctgccatggc ataaatcctg ttccacgaac gcgattcggg acggctctgt ccgttggact
    17101 ggtggacaaa acctgcaccg agcatacgca gcctgccgcc gaacggcaaa tctgccttca
    17161 caggctgggt caggaaaatt tcaggtttgt aatccgtatt gcggaacggc gcggatttcc
    17221 tgccttggtt gtaaatctgc caatcggatc tttgggtgta gccgaaccac agatccgcgc
    17281 gggttttaaa caaatcttcg gcaattttgc ttttgaacga aacctgcaat ttggtttccg
    17341 cacgtttctg ctgtccgaat ttttcctgta cagtcgtacc gcgcgtcggc gaacccgggg
    17401 catagttggg cgaattgttg taccagagcg gcataaggta catcggattg tgttcgcgta
    17461 cgcccaacag cccgcgcaaa tcgtttttgt ccaagtcgta catcaggctc aaaggcgtat
    17521 agatgtcggc ggtttcgccc gcactgtcgg caggaagcgc atccccgcct ttttcaacaa
    17581 caatgaccgc ctcgccctta tccaggctgc tgcggacggt ttccgtcaga ttgagtacgg
    17641 ctttcgactc ctgcccttcc taccctgccg aagacggaag ctgtgccgca aaaatcctgt
    17701 cgtaacacgc caaacgcgta acattgtccg tcaaagcggc gcattgcagc gcggtctctc
    17761 caaaagcgga tgccatcggc aacagtcctg tcaaaagaat atagcgcata ttccgtgtat
    17821 tcatctccgc ccccattgtc ggcatattgg ttttcaaacg gcattttata gcggattcgg
    17881 ataaaaaccg caccctttcc gccatttcgg gattttgccc ccgcaataca gaaaaccccg
    17941 aaaccgtcgg gcttcagggt tttccgctta tcgcgtatca accgccttgg cggttttgca
    18001 aaaatcaagc cagtgctttt acttttgcag acagacggct tttgtggcgt gccgctttgt
    18061 ttttgtggaa cacgcccttg tcggcgatgc ggtcgatgac tttgacggac tcttggtaaa
    18121 ccgcttgtgc ggcagcttta tcgcctgctt cgactgcttt caatactttt ttcactgcag
    18181 tgcggaatgc ggtacgcagg ctagcgttgt gggcgcgttg tttgacggac tggcgggcac
    18241 gtttgcgtgc ttgtgcgctg tttgccatat tggaatctcc tgaaagaaaa ataaattctg
    18301 taaacgcgca attttaaagg gggtttacat tatatgcaag ccttttctct ctatccgccc
    18361 gtcggacacc ctgacagcgc aaaaaaacgg caaaatcgtg cggacgtttt ctccctcttt
    18421 tgaaaacaag gtaatttttt aggaaaatca ggtcaatatc gctttgagtt tgcacaaatt
    18481 tactttacaa tgcccaaacc ttgcgccggg gtgtttatgg ggcgcggggt tttctttttt
    18541 tccaacctct ttcatcagga atctgcccgt atgaaaaaat ccgtattagc cgttttggcc
    18601 gcgctgtctc tggcagcctg cggcggcagc gaaaaaaacg ccgtgcaacc tcaagcagac
    18661 gctgcgtctg ctgccaatgc cgaagccgct gccaccgata ctctgaacat ctacaactgg
    18721 tcgaactatg ttgatgagag tacggtcgaa gactttaaaa aagccaacaa tctgaagctg
    18781 acttacgact tgtacgaaaa caatgaaacg ctggaagcca aaatgctgac cggcaaatcc
    18841 ggttacgatt tggttgtgcc gggcatcgcc ttcctgccgc gccaaatcga ggcgggcgcg
    18901 tatcaaaaag tcaacaaaga cctgattccc aactataaaa acatcgatcc cgaactcttg
    18961 aaaatgctgg aaaccgccga cccgggcaac cagtatgccg tcccctattt ctccggcgtg
    19021 aacacgattg cgattacggc gaaaggcaaa gagcttttag gcggcaagct gcccgaaaac
    19081 ggctgggatt tgctgttcaa acccgaatac acccacaagc tgaaatcctg cggcatcgcc
    19141 ctgtgggaca ccccgagcga aatgttcccg attttgctga actacttggg caaagacccc
    19201 aaaggctcga atcctgaaga tttgaaggcg gcggcggaag tgttgaagtc tatccgtccg
    19261 gatgtcaaac gtttcagccc gtccatcatc gacgagctgg cgcgcggcga catctgcctg
    19321 gcggcaggta acggcggcga cttgaacttg gcgaaagcgc gttctgaaga agtgaaaaac
    19381 aatgtcggca tcgaagtgtt gacgccgaaa ggtatgggat tctggattga gtcttggctg
    19441 attcccgccg atgcgaaaaa cgtcgccaat gcccacaaat acatcaacta cacgctcgac
    19501 cccgaaatcg cggcgaaaaa cggtatcgcc gtaaccttcg cgccggccag caaacctgcg
    19561 cgcgaaaaaa tgcctgccga gctggtgaac acccgttcca tcttcccgaa cgagcaggat
    19621 atgaaagacg gtttcgtgat gccgcaaatg agtacggatg cgaaaaaact gtcggtcagc
    19681 ctgtggcaga aaatcaaagt cggcaccaac tgatttgaag cattaaaaat gccgtccgaa
    19741 catcgttcgg acggcatttt atattggatt gaaatagaaa tatttatata gtggattaac
    19801 aaaaatcagg acaaggcgac
//
LOCUS       DAXHKG010000024        19729 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.024, whole genome shotgun sequence.
ACCESSION   DAXHKG010000024 DAXHKG010000000
VERSION     DAXHKG010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19729
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.024"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(368..922)
                     /locus_tag="ACFMWP_000662"
     CDS             complement(368..922)
                     /locus_tag="ACFMWP_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891301.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(1007..1507)
                     /locus_tag="ACFMWP_000663"
     CDS             complement(1007..1507)
                     /locus_tag="ACFMWP_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891302.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            1911..3107
                     /locus_tag="ACFMWP_000664"
     CDS             1911..3107
                     /locus_tag="ACFMWP_000664"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HFC5891303.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTKGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGIVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            complement(3210..4454)
                     /gene="clpX"
                     /locus_tag="ACFMWP_000665"
     CDS             complement(3210..4454)
                     /gene="clpX"
                     /locus_tag="ACFMWP_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HFC5891304.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFEP"
     gene            4645..5016
                     /gene="rbfA"
                     /locus_tag="ACFMWP_000666"
     CDS             4645..5016
                     /gene="rbfA"
                     /locus_tag="ACFMWP_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HFC5891305.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            5049..5981
                     /gene="truB"
                     /locus_tag="ACFMWP_000667"
     CDS             5049..5981
                     /gene="truB"
                     /locus_tag="ACFMWP_000667"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HFC5891306.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYAIDI
                     AEFDAPKAVISVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVAHFPQTVLNDYAVHMLQCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAVKNTGCV"
     gene            6272..6748
                     /locus_tag="ACFMWP_000668"
     CDS             6272..6748
                     /locus_tag="ACFMWP_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC5891307.1"
                     /translation="MKADIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPAI
                     IGLLLGNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDSSDIVLDFPFKDCVLNGGQSSEEGEEIYFKHSNSQPASQPASQPASQPANYTLN"
     gene            6976..8454
                     /locus_tag="ACFMWP_000669"
     CDS             6976..8454
                     /locus_tag="ACFMWP_000669"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC5891308.1"
                     /translation="MKLIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAK
                     ELLTDDGIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGTHE
                     YTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTEDKREDRPEMF
                     YPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYENLGYNFILPIADKQWG
                     RWRWGYSIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPTKKPKTIFYKPEYSSGN
                     GTEQMKNLFGEKAFKNPKPEELIQDFITITTNESDIVLDYHLGSGTTAAVAHKMNRQY
                     IGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILA
                     CEDSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQ
                     MYVSLSEMDDEQFAGCLNDDDKALSREFYQSAKNQAEKKDGE"
     gene            8444..11218
                     /locus_tag="ACFMWP_000670"
     CDS             8444..11218
                     /locus_tag="ACFMWP_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFC5891309.1"
                     /translation="MANNKTLFDWVEDRKSTLEEIEQTDFFALPEFVERNLKYPFFEW
                     QKSALENFVIFDRASKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPAHAKFLFTEKILQGDTVIPIRKVEMFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQDELDLEVELKA
                     NAGNAEIERKGWEHMVLELLLNKNGNPGQNVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLNKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYSAFLNWAENVQADDFEFLDTFSGSLNNSDNANEQGKTRTEQALKFMQENG
                     FEFAHLANWVKQNYQKHNVIITNSETNKNKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQIHGNQLLQETQ
                     FTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLN
                     IQNRNELQNNLLKDWQIEFLGLGQDKQVRPDDKLAGCLKILEMVEKHLNESDMPFIGT
                     KEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMDNFAGTGLEEALIQFISARL
                     GDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQIFI
                     EPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTES
                     FPLGAASLEK"
     gene            complement(11367..12539)
                     /locus_tag="ACFMWP_000671"
     CDS             complement(11367..12539)
                     /locus_tag="ACFMWP_000671"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HFC5891310.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            12828..13274
                     /gene="iscR"
                     /locus_tag="ACFMWP_000672"
     CDS             12828..13274
                     /gene="iscR"
                     /locus_tag="ACFMWP_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HFC5891311.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            13303..14517
                     /locus_tag="ACFMWP_000673"
     CDS             13303..14517
                     /locus_tag="ACFMWP_000673"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HFC5891312.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILISVMWANNEIGVV
                     QDIPAIGEICRERKIVFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            14584..14712
                     /locus_tag="ACFMWP_000674"
     CDS             14584..14712
                     /locus_tag="ACFMWP_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891313.1"
                     /translation="MNEQDLDLDNLDNLLDDFDGVTVEGGVDSENDDGCEGGACKI"
     gene            14778..15164
                     /gene="iscU"
                     /locus_tag="ACFMWP_000675"
     CDS             14778..15164
                     /gene="iscU"
                     /locus_tag="ACFMWP_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HFC5891314.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            15251..15571
                     /gene="iscA"
                     /locus_tag="ACFMWP_000676"
     CDS             15251..15571
                     /gene="iscA"
                     /locus_tag="ACFMWP_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HFC5891315.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(15531..15752)
                     /locus_tag="ACFMWP_000677"
     CDS             complement(15531..15752)
                     /locus_tag="ACFMWP_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HFC5891316.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            15834..16334
                     /gene="hscB"
                     /locus_tag="ACFMWP_000678"
     CDS             15834..16334
                     /gene="hscB"
                     /locus_tag="ACFMWP_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HFC5891317.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            16432..19182
                     /gene="gyrA"
                     /locus_tag="ACFMWP_000679"
     CDS             16432..19182
                     /gene="gyrA"
                     /locus_tag="ACFMWP_000679"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HFC5891318.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            19339..19729
                     /locus_tag="ACFMWP_000680"
                     /pseudo
     CDS             19339..19729
                     /locus_tag="ACFMWP_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         5532 a         4974 c         4623 g         4600 t
ORIGIN      
        1 ccttttccgc tttggcaacg attgaaaatt tccgtaaatt caaatatcta gattccttcc
       61 tgcacgggaa tgacacggaa gggtttcaga tgcagggtgg gcattcctgc ccacccaatc
      121 ccgcccttgc aacggtgggc aagaatgctc gccctatggt ctgacggttc gatatgatgc
      181 cgtctgaaaa cccaacggcg gcatgacaat gccgccctgc caacgcacgt aaatcagaat
      241 tgccatcccg acatcaaacg cttggaaaca aaatgccgtc taaaaatcaa acggcaacat
      301 aacaatgccc ctaacaaatg caaaaatgcc gtctgaaagc ccttcagacg gcattggcac
      361 gccggattta ccgccttctg ccgaaaccgc gcatggcggg gcggcggtaa ttggcgggcg
      421 ggcgcgttgt cgggcggtaa cgctgcgcct gcgccgcctg ttgttttgca cggaggctgc
      481 gcgtgttcaa atccctgctg gtgcgcgcat tgggatgtgc ggactgatgg taggctgcac
      541 gcgcgcgccg ggcgacggga ctgtcttggt tgcctgcccg tgtgaatttg tttgccagcg
      601 cgttgccgat aaacgcgcct gccgccgcgc cgactaggct ttgcagcagc cagcttcctg
      661 tcgattggtc gtaaatatac tgctgcccgt ctttaccggt aacgggttgc ccgttgttgc
      721 cgtttgcctg tgcttcggca ggaatggtgt ctttgactgc ttcgggagtc agttggtaaa
      781 ccgtatcgtc tgcctgctgt gcgagctgct gttgcagggc ttcaatctgt ttctgctgct
      841 gttcgagccg cgcctgcgtg tcgtcttggc aggcggcgag tgcgaatgtt gcgataagcg
      901 cggaggcgat gatttttttc atgtgtgtcc tgtttgggtg gaaaatcggt tttattgtat
      961 cgccgtcggg aattttggca agcattctgc cgacaaatcg tgatgtttac aggggcaggg
     1021 tgtgcagttt gcggacaaat gcgaggctgt tggcgactgg gttgcctttg ttttcgactt
     1081 cgtgttcggt ttctacggtc agcaggcggc ggtttttgtg tttgttcagg ctcaattcgg
     1141 cttgtgcggg tgtgaaaaac aggcggtgtt tttcggcaaa gcggcgggcg cggctgttgg
     1201 cggttttcaa aatctgaagc agcgatacgt ccagatggaa gcgtcgcacg cccaatacga
     1261 gaatccgtgc ggcaaaaaaa tcggcggcat cggtaaactc ggcggggctg ctgcggctga
     1321 agtcgtgccg ttcggcggct atcagggcgg caacagtgcg gatttgcgga atcatcgatt
     1381 cgctgataag tgtgtcgtcc cgccctgcat cgagaagcat gggggaaaaa tcctgtgcat
     1441 catcgacaat aatgctacaa gtgtgcaggg tttcgttttg tgcggcggtt tggggcattg
     1501 cattcatggt cattttcctg attctgtcgt gtgttgccga atcgggcgac ctgtgtgaag
     1561 gtaacaaaaa agccgccccg ttttcgagcg gcctgttttg cgtatgggat ggatttcaag
     1621 caagcgcaaa aaagtaccgc acgtctgtgt ggtaccaata gcaataagcg gttgtaaatt
     1681 ttttgccttg catgatgaaa tgccgtctga agataaaaat attggggaga ttctaaatca
     1741 aaacgctgcc gcgcctcaag cattttatcg aaattttttt gatttttcat ctatccgatt
     1801 gaaaatattt cggtttattt ttaccgctgc ccgatattgt cggcaatttc cctttatctg
     1861 ctttgaaaaa cggtgcataa tcccgagcaa aaccgcaatc aggagcaatt atgcaaaact
     1921 atctgacccc caatttcgcc tttgccccga tgattcccga acgcgcttca ggcagccgcg
     1981 tttgggatac gaaagggcgt gaatatattg atttttcagg cggtatcgcc gtcaatgcgc
     2041 tgggacactg ccaccctgcc cttgtcgatg ctttaaacgc gcagatgcac aagctgtggc
     2101 acatttccaa tatctatacg acgcgtccgg cgcaggaatt ggcgcaaaaa ttggttgcaa
     2161 acagttttgc cgacaaggtt tttttctgca actcgggcgc ggaagcgaat gaggcggcgt
     2221 tgaagctggc gaggaaatac gcccgcgacc gtttcggcgg aggaaaaagc gaaatcgtcg
     2281 cctgtatcaa cagttttcac ggacgcacgc tgtttaccgt gtccgtcggc ggtcagccga
     2341 aatacagcaa ggattatgca cccctgccgc aaggcattac gcacgttccg ttcaacgata
     2401 ttgccgcgct ggaagctgcc gtcggcgaac agacctgcgc ggtcatcatc gagccgatac
     2461 agggcgaaag cggcatcctg cccgccactg cggaatattt gcaaaccgcg cgccgtctgt
     2521 gcgaccggca caatgcgttg ttgattttgg acgaagttca aaccgggatg gggcatacgg
     2581 gcaggctgtt tgcctatgaa cattacggca ttgttcccga tattttgagt tcggcaaaag
     2641 ccttgggctg cggctttccg atcggcgcga tgctggcgac agaaaagatt gccgccgcct
     2701 tccaaccggg cacgcacggc tcgactttcg gcggcaaccc gatggcgtgt gcggtcggca
     2761 gccgcgcatt cgacatcatc aatacgcccg aaactttaaa ccatgtccgt gaacaggggc
     2821 agaaacttca gacggcattg ctggatttgg gcaggaaaac gggcttgttc tcacaagttc
     2881 gcgggatggg gctgctactc ggctgcgtgt tggacgaagc ctatcgcgga cgcgcatccg
     2941 aaatcaccgc cgccgccttg aaacacggcg tgatgatttt ggttgcgggt gcggacgtat
     3001 tgcgtttcgc gccttcgcta ctgttgaacg atgaggatat ggcggaaggt ttgcgacgtt
     3061 tggaacacgc gctgacggaa tttgccgcga catcagacaa tccgtaaaac tcaaatgccg
     3121 tctgaaggcg ggaaggcttc agacggcatc aaaaacaaaa aaccgcttcg gaaacgtggt
     3181 tcgacgttcc gaagcggttt tgtttgccat cagggctcga acaccaattc cggttccctg
     3241 ccctcttcga tgactgcctt accgaccacc acttttttca agcctttcaa atcgggcagg
     3301 cggtacatcg tatccaacag gcagcgttcg acgatggaac gcaggccgcg cgcgccggtt
     3361 ttgcgctcca ttgcctgacg cgcgatggaa cgcaatgcgc cttcttcaaa ctccagttcg
     3421 acattttcca taccgaacaa ggcttgatac tgcttgacca aagcattttt cggctcggtc
     3481 aaaatattaa tcagcgcgtc ctcatccagt tcttctaacg ttgcaatcac aggcaaacgt
     3541 ccgattaatt ccggaatcag accgaatttg attaaatctt ccggttcgac gatgccgaac
     3601 agcttggtaa tgtcggcatt ttcgtccttg ctgtgaacgg acgcaccgaa accgataccg
     3661 cctttctcgg tgcgctggcg gatgactttt tccaagcctg caaacgcacc gccgcagata
     3721 aacaggatgt tggtggtatc gacgttgata aattcctgat tcggatgctt gcggccgcct
     3781 tggggcggaa cacttgccac cgtaccttca atcagtttca gcaaggcttg ttgcacacct
     3841 tcgccggaca cgtcgcgcgt gatggacgga ttgtcgcctt tgcgtgaaat tttatcgatt
     3901 tcgtcgatat agacgatgcc gcgctgggct ttttcaacat cgaaatcaca tttgcccaac
     3961 agtttggtga tgatttgctc gacatcttcg ccgacataac ctgcttcagt cagcgtggtt
     4021 gcatccgcca tcacgaacgg tacgtccagt ttacgcgcca aagattgcgc cagcagggtt
     4081 ttacccgatc cggtcgggcc gataagcagg atgttggatt tcgacaattc gacattagct
     4141 ccggctttcg ggtggcgcag gcgtttgtaa tggttgtaca ccgacaccgc caaggctttc
     4201 ttggcttgtt cctgaccgat aacgtggtcg ttgaggttgg cgacgatttc ggcgggcgtg
     4261 ggcagcttgc cggattcttc cggctcccct ccggcacttt ccgaaggtgt gccgtcattt
     4321 ccgtcttcat gcaatatttc aatacagttt gagacgcatt cgtcacagat aaaggcgttt
     4381 tcgccctcaa ttaaatgttt gacgtgtgat ttggattttc cgcaaaagga acaggtacgg
     4441 ttttcgttgg acatggcttt ctttacaatg tatgcgttac agaaaacggc acgtgccgtt
     4501 cgggttgcca agtataataa ctatatccgt tcttatcaat gtattacctt aaaatcccgc
     4561 cgattaggct ataatacgcc ctttcgcaac cgccccggcg gcaaaaatgc cgtctgaaac
     4621 caaatctgaa atctgaggat attcatgaga aaaccccaac gcggctacgc ccgccaagac
     4681 cgtgtcaaag aacaaatcat gcgcgagctt gccgaactcg tccgtaccgg actgaaagac
     4741 ccgcgcgccg gcttcattac cgtcaacgaa gtcgaagtta cccgcgatta cagccacgcc
     4801 accgtgttct acaccatttt aaaccaagac gcgcgcgaaa ttacggaaga agtgctggaa
     4861 cacgcgcgcg gacacctccg cagcgaattg gccaaacgca tcaagctgtt caaaacgccc
     4921 gaactgcatt tcaaatacga cgaatctttg gaacgcggtt tgaacctgtc cgcccttatc
     4981 gaccaagtag cggcggaaaa accggttgaa gactgacgga tatgcccatg ccgtccgaac
     5041 atcgaaccat gaatacaggc aaaccccaaa aacgtgccgt caacggtgtt ttgctcttgg
     5101 acaaacccga aggcctttcc agcaacaccg cgctgcaaaa agcgcggcgt ttgtttcatg
     5161 ccgaaaaagc cggacatacc ggcgtgctcg accctttggc aaccggactt ttgcccgtct
     5221 gcttcggtga agcgaccaag ttcgcccaat acctgctgga tgccgacaaa gcctacaccg
     5281 ccacgctgaa actcggcgaa gccagcagca cgggtgatgc cgaaggcgaa atcattgcca
     5341 ccgcccgcgc cgatatttcc ttagccgaat ttcagacggc ctgccaagca ctgacaggca
     5401 acatccgcca agtgccgcca atgttttccg cgctcaagca cgaaggcaaa ccgctgtacg
     5461 aatacgcccg caaaggcatc gtcatcgaac gcaagccgcg cgatattacc gtttacgcca
     5521 tcgatattgc cgaatttgac gcacccaaag ccgtgataag cgtgcgttgc agcaaaggca
     5581 cctatatccg caccctcagc gaagacatcg ccaaacacat cggcacgttc gcccacctga
     5641 ccgccctgcg ccgcaccgaa accgccggct ttaccatcgc ccaaagccac acgctcgaag
     5701 ccttggcaaa tttgaacgaa acagaacgcg acagcttgct gctgccctgc gacgtattgg
     5761 ttgcccattt tccccaaacc gttttaaacg attatgccgt ccatatgctc caatgcgggc
     5821 aacggccgcg tttcgaggaa gacctgcctt ccgatacgcc ggtacgcgtt tacacggaaa
     5881 acggccgctt tgtcggactg gcggaatatc aaaaagaaat atgccgtctg aaagccttgc
     5941 gcctgatgaa cacggcggtt aaaaatacgg gctgtgtttg aataatgtgt tgatatagtg
     6001 gattaaattt aaaccagtac agcgttgcct cgccttgccg tactatttgt actgtccgcg
     6061 gcttcgtcgc cttgtcctga tttttgttaa tccactatat ttccgcaaaa tcacgacaca
     6121 ctcggacacc caccccgctt attgcaactt tgcgaacgcc cccggaaaca gcaaagataa
     6181 caaatgattg attttattag tatttatttg caaaaccatt tgccgttaca caagaatggc
     6241 acattaaaat gactgatgag gatttataac gatgaaggca gacattcaaa ccgaattaac
     6301 ccaagccctg ctatcacacg aaaaagtatg ggcgaacgaa gaaaaaacca ttttagccaa
     6361 aaacattctg ttggatttgg tggaaaaaac cgacccggcc attatcggtt tgttattggg
     6421 gaatgatgag ttaaaacgcc atttttttgt ggaagtgaat ggtgttttgg tgtttaaatt
     6481 gcaggatttt cgttttttct tggacaaaca cagcgtcaat aattcctaca caaaatacgc
     6541 caaccgcatt ggtttgacgg acggcaaccg ctttttgaaa gacagttcgg atattgtgtt
     6601 ggattttccg tttaaagatt gcgtattgaa tggcgggcaa agcagcgaag aaggcgaaga
     6661 gatttatttt aaacacagta atagccagcc agccagccag ccagccagcc agccagccag
     6721 ccagccagcc aattatacac taaattaacc cgaaaaagac aagaaatctt ttttaatcaa
     6781 acgcttgctt ttgatgaaat tgaccggctt tttgacgcaa aagcattctc aaaattctct
     6841 cgccacaccg cagacggcaa acaagcggtt ggcgaaatca aacgacattc agacggcaca
     6901 ccagccgaaa atctcattat caaaggcaat aatctgattg ccctgcattc gcttgccacg
     6961 cagtttaaag gtaaagtgaa gctgatttat attgatccgc cttattattt tgttaaaaag
     7021 aaacaacaag atagttttgg ttataacact aactttaaat tatctacttg gcttacattt
     7081 atgaaaaatc gtttatcaat tgccaaagaa ttattaactg atgatgggat tattgttatt
     7141 tccattgatg atgacggaaa tgcttattta aagattttgt tagatgaaat ttttggattt
     7201 gaaaatttta tcggaaattt acccactatt atgaatttaa aaggtaataa tgatgaatat
     7261 gcttttgcag gcactcacga atacacacta gtctttgcta aaaataaaga taaatctact
     7321 ttttatgaat ttccaataga tgaagataat tttttagaga aatgggaaga agatgaaatt
     7381 gggttttata aaaaaggagc tccaatgcga gcaacaggaa ccgaagataa aagagaagat
     7441 agacctgaaa tgttctatcc ttttttggta aaaaataaca cagttagtac aattacagat
     7501 gaagaatttt ctcaaatcta taataaagat ttagaagtat tcaatgatga ttttattcaa
     7561 aaactaaaag agaaatacga aaatcttgga tacaatttta ttttacctat tgctgataaa
     7621 caatgggggc gttggcgttg ggggtattca ataaagaata aggcaaggct gcagacggat
     7681 attattgtta gccaatctaa aaatggaatt tccttgtata aaaaacaaag acctgaatta
     7741 gatgatttac ctacaaaaaa acctaaaact attttttata aacctgaata cagtagtggt
     7801 aatggaactg aacagatgaa aaatcttttt ggtgaaaagg catttaaaaa tcctaaacca
     7861 gaagaactta tccaagattt tattaccatc acaaccaacg aatccgacat cgtcttagac
     7921 taccatcttg gtagtggcac aaccgccgcc gttgcccaca aaatgaaccg acaatatatc
     7981 ggtattgaac aaatggatta tattgaaacg cttgccgttg aacgcttgaa aaaagtgatt
     8041 gatggcgagc aaggcggtat ttccaaagcc gtgaattggc aaggtggtgg cgagtttgtt
     8101 tatgccgaac ttgccccatt taacgaaacc gcaaaacaac aaattttggc ttgcgaagat
     8161 tcagacggca tcaaaacgct gtttgaaggt ttatgcgaac gctatttctt gaaatacaac
     8221 gtcagcgtaa atgaatttag tcaaatcatt caagagcctg aatttcaatc cttggcatta
     8281 gacgaacaaa aacaaatggt gcttgaaatg ttggatttaa atcaaatgta tgtttcatta
     8341 tccgaaatgg atgatgagca atttgcaggt tgcttaaatg atgacgataa agcgttaagc
     8401 cgtgaattct atcaatcagc aaaaaatcaa gcggagaaaa aagatggcga ataataaaac
     8461 gttatttgat tgggtggaag accgcaaatc aacgctggaa gaaatagaac agacagattt
     8521 tttcgcgctg cctgaatttg tagaacgcaa tttaaaatat ccgttttttg aatggcaaaa
     8581 atcggcttta gaaaactttg tgatttttga ccgcgcttca aaattaaagg atttccctga
     8641 catcaaaaac cgccctaccc atttgctgtt caatatggca acaggtgctg gcaaaacgat
     8701 gatgatggcg gcgttgattt tgtattattt tgaaaaaggt tatcggcatt ttttgttttt
     8761 cgtcaatcaa aataatatcg tggataaaac ggaaaataat tttattgacc cggcgcacgc
     8821 aaaattttta tttaccgaga agattttgca aggtgatacg gtaattccta ttcgcaaagt
     8881 ggaaatgttc agcccacatt cagacggcat tgaaattaaa tttaccagca ttcaaaaact
     8941 gtataacgat atccacaccg agcgagaaaa ccaaaccaca ttggcagatt tgcacaaatt
     9001 gaaccttgtg atgctgggcg atgaagcaca ccatttaaac gcacaaacca aaggcaaaaa
     9061 acaagacgag ttggatttgg aagtggaatt aaaagccaat gcaggcaatg ccgaaattga
     9121 acgcaaaggc tgggagcata tggttttgga attgttgctc aataaaaatg gcaatcccgg
     9181 ccaaaatgtg ctgttggaat ttaccgccac gctgcctgaa aatgcggacg tgcaacaaaa
     9241 atatgcggac aaaatcatca caaaatttgg cttaaaagag tttttgcaaa aaggttatac
     9301 caaagaaatc aatttggtat ccagtacgct gaataagaaa gagcgggtgt tgcacgcttt
     9361 attatttgct tggtatcgcc atcaaatcgc gttgaaatac ggcattgcca atttcaagcc
     9421 tgtgatgttg tttagaagta agacgattga tgaatcaaaa gcggattatt cggcattttt
     9481 aaattgggca gaaaatgtac aagcggatga ttttgagttt ttagatacgt tttcaggcag
     9541 cctgaataat agcgacaacg ccaacgaaca aggcaaaacc cgaaccgaac aagccctaaa
     9601 atttatgcag gaaaatggct ttgagtttgc acatttggca aattgggtga aacaaaatta
     9661 tcaaaaacat aatgtgatta ttaccaactc cgaaaccaac aaaaacaaaa ctgaaaaaac
     9721 cgacagcgaa accgaaaaat tgctaaacaa tttggaagcg gctgataatc caatccgtgc
     9781 catttttacg gtagatagat taaccgaagg ttgggacgtt ctgaatttgt ttgatattgt
     9841 gcgtttgtat gaagggcaaa atggcggtgg ttcaaataaa aaatcaggca aaacggctgc
     9901 cgctaccgta tcggaaaagc agttgattgg tcgtggcgtg cgttattttc catttgcgtt
     9961 tgaaggtaaa cagccgaata aacgcaaatt tgacaacgac atgcaacacg aattgcgtat
    10021 cttggaagaa ttgttttatt acacgcacga tgagcaatcc cgctatattt cagaactgaa
    10081 aaatgagttg cgaaaagacg gttatttgcc tgaaaaagac gatgataagg tgttggcaac
    10141 atttaaactc aaatctgaat ttgccgataa taaggatttt agagagttgt taatttgggc
    10201 gaataaaaaa atccccaacc caaacgccaa aagcaataat gcagacagcc tgcaagccaa
    10261 tccgcaaacg ctttcattcc aaattcacgg caatcaattg ttgcaggaaa cgcaatttac
    10321 agccgatgaa aatgatgaaa cagcccgaca aatcggcaca caaaataatt ttactcaaac
    10381 cataaaaatg agtgaaatgg agcggcacat tttcaataaa gcattacata tcaaagggaa
    10441 aaatagtcaa tctttattcc attttgaccg cctgcaaagc aaactcaaca ttcaaaatcg
    10501 caatgaattg caaaataact tgttgaaaga ctggcaaatt gaatttttag gattagggca
    10561 agacaaacag gttcgcccgg atgataaact tgcaggctgc ctgaaaatct tggaaatggt
    10621 tgaaaaacat ctgaatgaaa gtgatatgcc gtttatcggt acaaaagaat ttacacctaa
    10681 aaaattatgg gaaattttcg gcacgccaaa acaaaaatgg gtcaaaaaag atgatgtaaa
    10741 aacgactatt gccacgcaaa atgattggta tgtgatggat aattttgctg gaacgggttt
    10801 ggaagaagcg ttaattcaat ttatttcagc gcgtttgggc gatttgaaat ctaaatatga
    10861 cgttcattta atccgtaatg aagaagtgtt taaattgaat aactttgccg atggtgaagg
    10921 atttatgccg gactttattt tattgctgaa agataaacaa aaatcttctt ccaatggtgt
    10981 gaacgacttt ttgcattacc aaattttcat tgagcccaaa ggtgagcatt tagtggaaac
    11041 tgatggatgg aaagaagaat ttttagaagc catcactgtg gaatatggga tggataagat
    11101 cctgcaaaaa gatacaccgc attatcgttt gatcggttta ccgtttttta ctgatcatca
    11161 gaaaaatgga caatttacgg agtcattccc tttaggtgcg gcatcgcttg aaaaatagag
    11221 tagtgcattg caggcaaccc cgtttgacaa aacttccttt acaaaagggc gttttgtcag
    11281 atatttaatc aacacattat taaaatacag ccaaatttta atgccgtccg aaccctgtgt
    11341 tcagacggca tcgtattttt cagtatctaa accgtttccc taccccaatc tttacccctt
    11401 aaaatcgagg catcgacatc ttgaatatcg cggtgtcccg taaacgccat agatatatcc
    11461 atttctttat atagaatttc cagcgcacgg gttacgcctt cttcgccata cgcgcccaag
    11521 ccatacagga acgcccgacc tatcattgta cctttcgcgc ccaaagccca cgccttcaaa
    11581 atatcctgac cgctgcggat gccgctgtcc atccaaactt cgatgtcgct gcccactgcg
    11641 ctgacgatgt cgggcaaggc tttgatggca gacacggtat cgtcgagctg tcggccgccg
    11701 tggttggaaa caatcaatgc gtccgcgccg cttttcgctg ctttttccgc gtcttcgggt
    11761 tccataatgc ctttgataat cagcttgccg ccccacaaat ctttaatgcg cgccacatcg
    11821 tcccagctca ggcgcgggtc gaattgttcg gaagtccatg aagacagcga agacaaatcg
    11881 ccgacgttct tcgcgtgtcc gacgatattg cggaacgtgc ggcgttccgt gttcagcatt
    11941 ttcatgcacc attccggttt ggtcgccaga ttgattaaat tggcgatggt cggtttcggc
    12001 ggcgcggaca ggccgttttt gatgtctttg tggcgttgac ccaaaacctg caaatcggcg
    12061 gtcaatacca atgccgaaca tttggcatcc ttcgcgcgct taatcaggtt ttccataaac
    12121 tcgcggtcgc gcatcacata aagctgaaac caaaacggcg cgctggtgtt ctcggcaacg
    12181 tcttcaatcg agcagatgga catggtggac aacgtaaacg gaataccgaa cttctccgcc
    12241 gcccgcgccg ccaaaatttc gccgtctgcg tgtgccatgc cggtaaaacc cgtcggcgca
    12301 atcgccaccg gcattttcac atcctgcccg atcattttag tctcaaggct gcgtccctcc
    12361 atattgacca atactttttg acggaagcgg atgtctttga aatccgaagt attttcccga
    12421 taagtcgttt ccgtccacga acccgaatcg atgtaatcgt aaaacatacg cggcattttg
    12481 cgcttggcaa cgcggcgcaa gtcttcgatg caggtcattt tgctcaaatc acgtttcatt
    12541 tgtcgcccct gaatacctga ataactttat atgaaataga taatgtatat caatattgat
    12601 tataaggcaa atcatttcaa catttactgc acccgccgcc gctcccactt caagcggcat
    12661 aaggtttaga attcaaaaat aatatattaa aatcaaaata ttaaaaatca atcaatctgc
    12721 cgatttaaac agccaatcgc gcaatccgcc cccatacttg actgaaacac tcagatattg
    12781 gacaattccg cccactataa aaaaagccga cacgggcaac caccaccatg agactgacca
    12841 ccaaagggcg tttcgccgtt accgctatgc tggatttggc gatgaacgcg caaaccggcg
    12901 ccgtcaaact cagtgccatc agcgaacgcc aaaacatatc cctctcctat ctcgagcaat
    12961 tgttcggcaa actccgccgc gccggacttg ttgaaagcct gcgcgggccc ggcggcggct
    13021 acatcctcgc cgcaccggcg gcacgcatca acatcgccca aatcatcgcc gccgccgaag
    13081 accggctgga cgcgacccaa tgcggcagca aagccaactg ccaccacggc gcgccctgcc
    13141 tgacgcacga cctttgggag aatttaaaca aaaccatcaa cgactacctc ggcagcgtta
    13201 ccctgcaaag catcatcgaa cagaaaaaca acggcgacgg cagccgcgtc gtccaattta
    13261 cacacatcca ttaaataaca cccgaaaaag aaagggcaaa ccatgaccgt caaaaccccc
    13321 gtttacctcg actacgccgc caccaccccc gttgacaaac gcgttgccga aaaaatgatt
    13381 ccctatctga ccgaaacctt cggcaacccc gcctccaaca gccacgcatt cggctgggaa
    13441 gcagaagagg ccgtcgaaaa agcccgcgcc gacatcgctg ccctgattaa tgccgacccc
    13501 aaagaaatcg tcttcaccag cggcgcgacc gagtccgaca acctcgccat caaaggcgcg
    13561 gcaaacttct acaaaaccaa aggcaaacac ctcatcaccg tcaaaaccga acacaaagcc
    13621 gttttagata caatgcgcga actcgaacgc caaggttttg aagtaaccta cctcggcgtt
    13681 caagaaaacg gtttgattga tttggaagaa ctcaaagccg ccatccgcga cgacaccatc
    13741 ctgatttccg taatgtgggc aaacaacgaa atcggcgtgg tgcaagacat tcccgccatc
    13801 ggcgaaatct gccgcgaacg taaaatcgtc ttccacgtcg atgccgccca agcctgcggc
    13861 aaagtgcctg tcgatgtcga agccgccaaa atcgacctgc tctcgatgtc cgcgcacaaa
    13921 gtgtacggcc ccaaaggcat cggcgcgctg tacgtccgcc gcaaaccgcg cgtccgcctc
    13981 gaagcccaaa tgcacggtgg cggccacgaa cgcggcttcc gcagcggcac attaccgacc
    14041 caccaaatcg tcggtatggg cgaagccttc cgcatcgcca aagaagaact cgaacaagat
    14101 atggcgcact accgcaaact gcgcgacatc ttcctcaaag gcatcgaagg catcgaagaa
    14161 gtctatatca acggcgacct cgaacaccgc gccccgaaca acctgaacgt cagcttcaac
    14221 ttcgtcgaag gcgaaagcct gattatggca gtgaaagaac tcgccgtatc cagcggctcc
    14281 gcctgcacct ccgcctcgct cgaacccagc tacgtcctgc gcgcattggg cagaaatgac
    14341 gaattggcgc actcgtccct gcgcatcacc ttcggtcgca tgaccactga agaagaagtg
    14401 caatttgccg ccgaactgat taaatccaaa atcggcaaac tgcgcgaact gtcgccgttg
    14461 tgggaaatgt tcaaagacgg gattgatttg aactcgattg aatgggcggc gcattaaagc
    14521 gtaccaacat gccatccgaa ccttcagacg gcattccaaa aacaaagcaa tcaagagaaa
    14581 aatatgaacg aacaagattt agatttggac aacctcgaca acctgcttga cgatttcgac
    14641 ggcgttaccg tggaaggcgg cgtcgattcg gaaaacgacg acggctgtga aggcggagcg
    14701 tgcaaaatct aactcaggcc gtctgaaaac cggcaaacaa accacttaaa tcatcaaaac
    14761 attaaggaaa ccacatcatg gcatacagcg ataaagtaat cgaccactac gaaaatcccc
    14821 gcaacgtcgg tactttcgac aaaaacgacg aatctgtcgg caccggcatg gtcggcgcac
    14881 cggcctgcgg cgacgtgatg cgcctgcaaa tcaaagtgaa cgatgaaggc atcatcgaag
    14941 atgcgaaatt caaaacttac ggctgcggtt ccgccatcgc ttcgtccagc ctgattaccg
    15001 agtgggtcaa aggcaaaagt ctggatgacg cgctggcaat caaaaacagc gaaatcgccg
    15061 aagagttgga attgccgccg gtaaaaatcc actgctccat cttggctgaa gatgcggtaa
    15121 aagcggccgt tgccgactac cgcaaacgtc aggaaaacag ataaagcctt tcagacggca
    15181 tcgtcccgca atgccgtccg aaccacccgc cgcttcaggt ccgtccgggg cggtacaaca
    15241 aggaagaaat atgattaccc ttaccgagaa tgccgcaaaa cacatcaatg actatctcgc
    15301 caaacgcggc aaaggcttgg gcgtacgctt gggtgtgaaa accagcggct gctcggggat
    15361 ggcgtacaac cttgaatttg tcgatgaagc cgatggcgac gacctgattt tcgaaggaca
    15421 cggcgcgcgc atttatatcg atccgaaaag cctggtttat ctggacggca cgcaagtcga
    15481 ttacaccaaa gaaggtttgc aggaaggttt caaatttgaa aaccccaatg tcaaagactc
    15541 ctgcggctgc ggcgaaagct tccacgttta aggcataaaa acggcgggac agtatcaaaa
    15601 ccgtcccgcc attttttcgc ttcctgcctg ttgtagctgc ctttgccttt ccttttccgt
    15661 tccaccttgt gccggaacaa atcggatttc actaaggctt ttaaagcatt gtcgcgtatt
    15721 ttgcctttat tgtgctgcac tttgccgccc atattcagtc ctttcgttta agaagctgca
    15781 gattataagg caaaaacagt tttctgccaa aatcttacat ttatcattct actatgtccc
    15841 aatatttcac cctcttccgg attgaacccg ctttcgatat cgacaccgaa aacttggaac
    15901 aaacctaccg cgccttggcc gcccgtttcc atcccgataa attcgcttca gcttccgcct
    15961 ttgagcaaaa gcaggcagtg atgatgtctt ccaccatcaa cgatgcctac cgcaccttga
    16021 aaaaccccat cgaccgcgcc gcctacctgc tgaaaacatc gggcatcgat gccgacgcgc
    16081 cggagcatac cgctttcgcc cccgaattcc ttatgcagca aatggaatgg cgcgaaacgc
    16141 tgatggaggc acgggcaggc aacgaccttg aatccttgaa aaatctcgac aacgaaatcc
    16201 gcgacgaaca agaaaaactg ttctgcggtc tgaaacagtc gtttgcccga caagattacg
    16261 acacagccgc acaacaagtc cgccaaggca ggtttctcga caaactccgc aacgaaattt
    16321 cctcggcatt ataatccgca ccgtgtttca gacggcgtaa ccgccgcacc gttccgcgtc
    16381 aaaatatgct aaaataagca acaatttttt gccatacgaa acattgaaac catgaccgac
    16441 gcaaccatcc gccacgacca caaattcgcc ctcgaaaccc tgccggtaag ccttgaagac
    16501 gaaatgcgca aaagctatct cgactacgcc atgagcgtca ttgtcgggcg cgcgctgccg
    16561 gacgttcgcg acggtctcaa gccggtacac cgccgcgtac tgtacgcgat gcacgaattg
    16621 aaaaacaact ggaatgccgc ctacaaaaaa tcggcgcgca ttgtcggcga cgtcatcggt
    16681 aaataccacc cccacggcga taccgccgta tacgacacca tcgtccgtat ggcgcaaaat
    16741 ttcgctatgc gttatgtgct gatagacgga cagggcaact tcggatcggt ggacgggctt
    16801 gccgccgcag ccatgcgcta caccgaaatc cgcatggcga aaatttccca cgaaatgctg
    16861 gcagacattg aggaagaaac cgtcaatttc ggcccgaact acgacggtag cgaacacgag
    16921 ccgcttgtac tgccgacccg tttccccaca ctgctcgtca acggctcgtc cggcatcgcc
    16981 gtcggcatgg cgaccaatat cccgccgcac aacctttccg ataccgtcaa tgcctgcctg
    17041 cgcctgctcg atgcacccga caccgaaatc gacgaactga tcgacattat ccaagccccc
    17101 gacttcccga ccggggcaac catctacggc ttgagcggcg tgcgcgaagg ctataaaaca
    17161 ggccgcggcc gcgtcgttat gcgcggtaag acccatatcg aacccatagg cagaaacggc
    17221 gaacgcgaag ccatcgttat cgacgaaatc ccctatcagg tcaacaaagc caagctggtc
    17281 gagaaaatcg gcgatttggt tcgggaaaaa acactggaag gcatttccga gctccgcgac
    17341 gaatccgaca aatctggtat gcgcgtcgtt atcgagctga aacgcaacga aaatgccgaa
    17401 gtcgtcttaa accaactcta caaactgact ccgctgcaag acagtttcgg catcaatatg
    17461 gtggttttgg tcgacggaca accgcgcctg ttgaacctga aacagattct ctccgaattc
    17521 ctgcgccacc gccgcgaagt cgttacccga cgtacgcttt tccggctgaa gaaggcacgc
    17581 catgaagggc atattgccga aggcaaagcg gtcgcactgt ccaatatcga tgaaatcatc
    17641 aagctcatca aagaatcgcc caacgcagcc gaggccaaag acaaactgct tgcgcaccct
    17701 tggcgcagca gcctcgttga agaaatgctg acgcgttccg gtctggattt ggaaatgatg
    17761 cgtccggaag gattggctgc aaacatcggc ttgaaagagc aaggttatta cctgagcgag
    17821 attcaggcag atgctatttt acgcatgagc ctgcgaaacc tgaccggcct cgatcaagaa
    17881 gaaattgtcg aaagctacaa aaacctgatg ggtaaaatca tcgactttgt ggatatcctc
    17941 tccaaacccg aacgcattac ccaaatcatc cgcgacgaac tggaagaaat caaaaccaac
    18001 tatggcgacg aacgccgcag cgaaatcaac ccgttcggtg gcgacattgc cgatgaagac
    18061 ctgattccgc aacgcgaaat ggtcgttacc ctgacacatg gcggctatat caaaacccag
    18121 ccgaccaccg actatcaggc gcagcgtcgc ggcgggcgcg gcaaacaggc ggctgccacc
    18181 aaagacgaag actttatcga aaccctgttt gttgccaaca cgcatgatta tttgatgtgc
    18241 tttaccaatt tgggcaagtg tcattggatt aaggtttaca aactgcccga aggcggacgc
    18301 aacagccgcg gccgtccgat taacaacgtc atccagttgg aagaaggcga aaaagtcagc
    18361 gcgattctgg cagtacgcga gttccccgaa gaccaatacg tcttcttcgc caccgcgcag
    18421 ggaatggtga aaaaagtcca actttccgcc tttaaaaacg tccgcgccca aggcattaaa
    18481 gccatcgcgc tcaaagaagg cgactacctc gtcggcgctg cgcaaacagg cggtgcggac
    18541 gacatcatgc tgttctccaa cttaggtaaa gccatccgct tcaacgaata ctgggaaaaa
    18601 tccggcaacg acgaagcgga agatgccgac atcgaaaccg aaatttcaga cggcatcgaa
    18661 gatgaaaccg ccgacagcga aaacgcactg ccgagcggca aacacggtgt tcgcccgtcc
    18721 ggtcgcggca gcggcggttt gcgcggtatg cgcctgcctg ccgacggcaa aatcgtcagc
    18781 ctgattacct tcgcccctga aaccgaagaa agcggtttgc aagttttaac cgccaccgcc
    18841 aacggatacg gaaaacgcac cccgattgcc gattacagcc gcaaaaacaa aggcgggcaa
    18901 ggcaatattg ccattaacac cggcgagcga aacggcgatt tggtcgccgc aaccttggtc
    18961 ggcgaaaccg acgatttgat gctgattacc agcggcggcg tacttatccg caccaaagtc
    19021 gaacaaatcc gcgaaaccgg ccgcgccgca gcaggcgtga aactgattaa cttggacgaa
    19081 ggcgaaacct tggtatcgct ggaacgtgtt gccgaagacg aatccgaact ctccgacgct
    19141 tctgtaattt ccaatgtaac cgaaccggaa gtcgagaact gaaaatcatc tcccgatgcc
    19201 gtctgaagat tcagacggca tttattttat ccctcatccg tcatccagct tctcacaata
    19261 tagcggatta tagtcaatta aaaacaaggg gctgtcctag ataactaggg aaattcaaat
    19321 taagttagag ttgcccctat gagaaaaagt cgtctaagcc ggtataaaca aataaactca
    19381 ttgaactgtt tgtcgcaggt gtaactgcaa gaacgacagc agagttagta ggcgttaata
    19441 aaagtaccgc agcctattat tttcatcgtt tacgattact tatttatcaa aacagtccgc
    19501 atttggaaat gtttgatggc gaagtagaag cagatgaaag ttattttgct gaacgacaaa
    19561 accatatcaa tggaattgag aacttttgga accgggcaaa acgtcattta cgcaagtttg
    19621 acggcattcc caaagcgcat tttgagctgt atttaaaggg gtacgaacgg cgttttaaca
    19681 acagtgagat aaaagttcaa atttccattt taaaacaatt agtaaaatc
//
LOCUS       DAXHKG010000025        19569 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.025, whole genome shotgun sequence.
ACCESSION   DAXHKG010000025 DAXHKG010000000
VERSION     DAXHKG010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19569
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.025"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(65..1312)
                     /gene="fabF"
                     /locus_tag="ACFMWP_000681"
     CDS             complement(65..1312)
                     /gene="fabF"
                     /locus_tag="ACFMWP_000681"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HFC5891319.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="ACFMWP_000682"
     CDS             complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="ACFMWP_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFC5891320.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            1936..2943
                     /locus_tag="ACFMWP_000683"
     CDS             1936..2943
                     /locus_tag="ACFMWP_000683"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HFC5891321.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNMVYKLGLIPVTGNRTKPV
                     KLMGLDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     YQGIINRMGFNNHGIDAMIQNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAAEKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     Q"
     gene            2959..3138
                     /locus_tag="ACFMWP_000684"
     CDS             2959..3138
                     /locus_tag="ACFMWP_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891322.1"
                     /translation="MPSERTFCRSDGIFISFSCLPPFENPLRAALFETKQTPAANRTI
                     LIRSQSKSGGKLLNI"
     gene            3277..3600
                     /locus_tag="ACFMWP_000685"
     CDS             3277..3600
                     /locus_tag="ACFMWP_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891323.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            3687..3968
                     /locus_tag="ACFMWP_000686"
     CDS             3687..3968
                     /locus_tag="ACFMWP_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891324.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            4021..4494
                     /locus_tag="ACFMWP_000687"
     CDS             4021..4494
                     /locus_tag="ACFMWP_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HFC5891325.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            4748..5083
                     /locus_tag="ACFMWP_000688"
     CDS             4748..5083
                     /locus_tag="ACFMWP_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891326.1"
                     /translation="MTVDKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLLSKQGDPDFQGFAEDALDEI
                     SLFIFKKRP"
     gene            5263..7953
                     /gene="glnE"
                     /locus_tag="ACFMWP_000689"
     CDS             5263..7953
                     /gene="glnE"
                     /locus_tag="ACFMWP_000689"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HFC5891327.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRDTKSPQHLSVVAMGKAGGYELNVSSDIDLIFIYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVLTPYPNGIKSLVRPFVFRKYLDYGAYEAMRKLHRQIRS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQRLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPGEQTQSSGEWQWVWQEKPDEEGRQCRLKEHGFDAETIAAR
                     LDQIRNGHKYRRLSAHAQPRFDALVPLLVQAAAAQTNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMSQSSWVAAYLNKYPILLDELISAQLLDTAFDWDKLAAELS
                     DGIKACGGDTEAQMDTLRHFQHAQVFRLTVQDLAGLWTVESLSDQLSALADTVIAAAL
                     SCAWADMPKKHRDTPQFAIVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALSGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLANYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAEKTEVSGELLAHYGNVRKLWREVFGEEAATA"
     gene            complement(8253..8945)
                     /locus_tag="ACFMWP_000690"
     CDS             complement(8253..8945)
                     /locus_tag="ACFMWP_000690"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC5891328.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(9053..10246)
                     /locus_tag="ACFMWP_000691"
     CDS             complement(9053..10246)
                     /locus_tag="ACFMWP_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC5891329.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(10375..11112)
                     /gene="pxpA"
                     /locus_tag="ACFMWP_000692"
     CDS             complement(10375..11112)
                     /gene="pxpA"
                     /locus_tag="ACFMWP_000692"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HFC5891330.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(11099..12028)
                     /locus_tag="ACFMWP_000693"
     CDS             complement(11099..12028)
                     /locus_tag="ACFMWP_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HFC5891331.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(12025..12672)
                     /gene="pxpB"
                     /locus_tag="ACFMWP_000694"
     CDS             complement(12025..12672)
                     /gene="pxpB"
                     /locus_tag="ACFMWP_000694"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HFC5891332.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            12856..15063
                     /gene="uvrD"
                     /locus_tag="ACFMWP_000695"
     CDS             12856..15063
                     /gene="uvrD"
                     /locus_tag="ACFMWP_000695"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HFC5891333.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVDVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FILDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKIAAFVRLIEALRNQVGQLPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFEILPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSIKKTAYDSYGNTRQTATFKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEEM"
     gene            15298..15837
                     /locus_tag="ACFMWP_000696"
     CDS             15298..15837
                     /locus_tag="ACFMWP_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC5891334.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRECGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(16027..16242)
                     /locus_tag="ACFMWP_000697"
     CDS             complement(16027..16242)
                     /locus_tag="ACFMWP_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891335.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(16366..16725)
                     /locus_tag="ACFMWP_000698"
     CDS             complement(16366..16725)
                     /locus_tag="ACFMWP_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC5891336.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            16778..17155
                     /locus_tag="ACFMWP_000699"
     CDS             16778..17155
                     /locus_tag="ACFMWP_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5891337.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWNRAKRHLRKFNGIPKAHFELYLKECEW
                     RFNNSEIKVQISILKQLVKSSLS"
     gene            17354..17974
                     /locus_tag="ACFMWP_000700"
     CDS             17354..17974
                     /locus_tag="ACFMWP_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HFC5891338.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            17997..19448
                     /locus_tag="ACFMWP_000701"
     CDS             17997..19448
                     /locus_tag="ACFMWP_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="HFC5891339.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLNPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
BASE COUNT         4819 a         5098 c         4953 g         4699 t
ORIGIN      
        1 ctataaaaat gccgtctgaa acggtttcag acggcatttc gatgtcggcg gcggctttgc
       61 ggaatcagcc tttgaagcgt ttgaagacca gcgtgccgtt ggtgccgccg aagccgaagg
      121 agttggaaat ggcaacgtcg atttccgcgt cgcgcgcttc gttggcgcag tagtccaaat
      181 cgcagccggc ttcaacgtct tgttcaaaaa tgttgatggt cggcgggatt ttgccgtcgt
      241 gtatcgccaa aatgctgtac acggcctcca cgccgcccgc cgcgccgagc aggtggccgg
      301 tcatggattt ggtcgagctg acgacggttt tgtaggcgtg ttcgccgaac gcgcgtttga
      361 gggctttggt ttcgttggca tcgcccaagg gggtggacgt gccgtgcgcg ttgacgtaat
      421 ccacgtcttc gggattgatg ccggcatctt tcagcgcgcg ggtaacggca agggcggggc
      481 cttcttcgtt cggcgcggtg atatggtaag catcggaact catgccgaag ccgacgattt
      541 cggcgtagat tttcgcgccg cgttttttgg cgtgttccaa ttcttccaac accaatatgc
      601 ccgcgccttc gccgataacg aagccgtcgc ggcctttgtc ccacggacgg gaagcggtgg
      661 cggggtcgtc gttgcgggtg gagagggctt tcatcgcggc aaaaccgccc acgcccaaag
      721 tgctgattgc gccttccgcg ccgccggcaa ccattatgtc cgcgtcgccg tatttgatca
      781 gtcgggcgga attgccgatg gcgtgcgcgc cggtggtaca ggcggaaacc atcccgtagc
      841 tcgggccgcg gtagcctttg aggatggtaa cgtgtccgga aatcaggttg atcagcgaac
      901 cggggataaa gaaagggttg attttgcgcg cgccgccttc gattacggct ttgccggtga
      961 cctcgatgct gggcagtccg ccgatgccgg aaccgatgtt cacgccgatg cggtctttgt
     1021 cgaggttttc cacatcgtcc aagcccgaat cggcgattgc ctgcaatgcg gcggcaatgc
     1081 cgtagtggat gaatacgtcc atccggcgcg cttctttcgc gctgatgtat tgtccgatgt
     1141 cgaaaccgcg cacttcgccg gcgacacggc tgttgatgtc ggatgcgtca aagcgggtaa
     1201 tcgcgccgat gccgcttttg ccggcgagca gggtgtccca agcctctgcg acagtgttgc
     1261 cgacagggga aacctgacct aagcctgtaa tgactactct tctctgactc atgataacct
     1321 cgctgttggt tgtcggaatg ggggcatatg cggctgtcgt gcagatgccg tctgtaattt
     1381 gcggcagggg ttcaaacagt ttgccatata agggaaaagc ctctattgcg cggtgcagca
     1441 gaggctgttg tgtcgggcga cgaccggtta gccgttgtgg gcattgatgt agtcgatagc
     1501 cagttggacg gtggtgattt tttcggcatc ttcgtcgggg atttcgcagc cgaatgcttc
     1561 ttccaaagcc ataaccagct ccacggtgtc caaagaatcc gcgcccaagt cgtcttggaa
     1621 agaagattcg tttttcacgt cggcttcgtt tacgcccagt tgttcagcaa caattttttt
     1681 aacttgttgt tcgatgtttg acatatcagt cgttccttta tgccttgcgg caggttgttt
     1741 aagggaaata aatcggtggt attgtaccga cttttaatag agttttctat ctaatgacta
     1801 ttatatcaat atttgccgat ttgtacattt ttgggtgcgg cgggttttgt cgttcaagtt
     1861 tgacctgtgt gccgtatgtt tgacgggatt tcggttaaaa tgacggcatt tccatctgaa
     1921 gcagaaagcc ctgtcatgta tccacttgcc cgccgcatcc tgtttgcact cgatgccgag
     1981 aaagcccacc acttcacgct cgacgcgctc aacatggttt ataaattggg tctgattccc
     2041 gtaaccggca accgtaccaa acctgtaaaa ctgatgggtt tggatttgcc caaccctgtc
     2101 gggcttgccg ccggactcga taaaaacggc gaatatatag acgcattggg cgcgctcggc
     2161 ttcggtttca tcgaaatcgg cacggtaacg cccaacccgc agcccggcaa cccgcagccg
     2221 cgcctcttcc gcgttcccga atatcaaggc atcatcaacc gcatgggctt caacaaccac
     2281 ggcatcgatg ccatgattca aaacatcgaa aaaagtaaat tcagcggcgt attgggcatc
     2341 aacatcggca aaaacgctgt aacaccgatt gaaaacgctg ccgatgatta tttaatctgc
     2401 ctcgaaaaag cctacgcaca cgcaagttac attaccgtca atatttcctc gcccaacact
     2461 aaaaacctcc gcgcgctgca aggtggcgac gagttgagcg cattgcttga ggctttgaaa
     2521 aacaaacagg cacagcttgc ctctgtacac gggaaatacg tcccgctcgc cgtcaaaatc
     2581 gcccccgatt tggatgaagc acaaatcgaa gacatcgccc acgttgtcaa atccgtcgaa
     2641 atggacggca tcatcgctac caataccacc atcgacaaat caagtctcgg cagccatccg
     2701 ctcgcaggcg agcagggcgg tttgagcggg ctgcccgttc atgaaaaaag taatcgggtg
     2761 ttgaagctgt tggcagacca catcgacggc aagctgccga ttatcggcgt aggcggcatt
     2821 atggaaggca gggacgcggc agagaaaatc cgcttgggcg caactgccgt ccaggtgtac
     2881 agcggattga tatacaaagg tccggcattg gtcaaagaat gtttgaaggc tttggcgcaa
     2941 tgacgcgtcc cgcacaaaat gccgtctgaa cgcacgtttt gccgttcaga cggcattttt
     3001 atttcctttt cctgcctgcc gccctttgaa aatcccttac gcgccgccct gtttgaaaca
     3061 aagcaaacgc ccgccgcgaa ccggacaatc ttgatacgca gccaaagcaa gtccggcggt
     3121 aagttgttaa acatataaat aattgatatg aaaaaataat tttatgccgt ggtggacggt
     3181 ttgagaaaac gcaaaatatg aacggcgttg aaattcatga tgtggaaaat aaggatacgg
     3241 cggataatca aaagatttta tatttaagga tttgatatgt ttaaggacga actaaatgaa
     3301 tttatccgat tgatatccga tccggaaagt gaattggatg aatggtattt gagtgatttt
     3361 aaagatgaac atatatggga aatgcaaagt tacgaagcat tttcatgttt gcgggaagca
     3421 gtcccctatt tgtttgctta tccccgatac gggtatgaac tgttggagat aatttccgcg
     3481 ttaaaagaaa catctgatac gacagaatta ttttatgagc cgggtatcgt gcctttgctg
     3541 attgatttat ataaagaaga tagttatctg gtaaatatgg tcaaacggat attcaaatga
     3601 tgaaaggggc gcgggcgttt gcttggcgga aggcaggtaa ctcaatttga aggacgcgga
     3661 agccgatacg ttaaaaagga tgaaaaatgg aaaacgggca acggaataac cggtttcctt
     3721 tggaaaaacg aattttttat ctggagcatt cggggcggta tctgatgatt tgcgccttat
     3781 cggattattc ccaaaacaaa catactgtcg ttatggcaaa tttcatctat ccggatgaaa
     3841 aaacggattg gcggaatttg gatgatttat tcaatgagtt ggttttagag gaattgcagg
     3901 cttcatttat ggattggcat ccgactgttg aagaggcaat cagccgtcat ttggaagact
     3961 tttcgtaaca ggcgtcaatc ggaaggggcg gaatgacggg gcaggcaatc ggagtaaaaa
     4021 atgaaccttg atttaaccgc gcaaaaagtc cgtctttctt ggaaggatat tctgtggggg
     4081 tatgggaata aatacttggg ttgggctgat gtggcagctt atgcccgaaa aatgacgctt
     4141 tcagatcatg atgaacgtgt gttcaaacta tctttaatca acaaatccaa tattcttgaa
     4201 ttaaagcctg ttctggaaga tttggcttcg gaaatgaggg attattcccc taaaaattgg
     4261 ctgtacgtcc tcttaagcga tgtattccat agaaaagaag aatttgagga tcctttgggg
     4321 gaagttgaaa aaatttatgc agattttgat tatccggaag aaatagaatc atttgtcagg
     4381 tatatgccgc ccaaagacgg ttatattcct tctgcccaca cctatgaaga aaatattgcc
     4441 cggttatatt ctcactggga acactatttg aacaacggcg gagggcaggg ttaaaaccgg
     4501 caatccgatg ccgtctgaag cattatccgg ccttcagacg gcaaacggat tagagcggaa
     4561 gatttgaaag cgggggcggg ctgcattccg gaagcggcaa aacccgaacc gcccgcatcg
     4621 ttgccgataa accgataagg aaatcgtttt gccggaccgg gtgcaaatgt ttgataacaa
     4681 tcctgccgcc cggcaaaaat gctttaaaga aagcaggatt ggttaattta aaaggaaaaa
     4741 ttaaaaaatg acggttgata aggaacaagt agaaaagatg atttattctg aaaataaaca
     4801 gagtgttatt gacggtatgc tcggtatgac cttcagctcg gaggaggatg aaatcccctg
     4861 gatttccgag aagttgacgg agttgtcgaa acataaagac ttggatattg ccagattgtc
     4921 attaacctgt ttcggacatc tcgccaggat gcatgaaaat atcggcgatt gcgataaagt
     4981 gattgcttta ttgctctcaa aacaaggtga tccggatttt caaggttttg ccgaagatgc
     5041 gttagacgag atttctttat ttatatttaa aaagcgtccg taagcgcgga ttaaacctgt
     5101 caatccgatg ccgtctgaag cgttatccgg ctttcagacg acatcgaagg ttgctatgat
     5161 atagtggctt gactttaaac cagtacggca tcccctcgcc ctgtcctgat ttgaagtgaa
     5221 tccgccatca tcttcctgcc attttttcaa acggaatccg aaatgtccga caaccgcctc
     5281 gacactgccc gccgccattc cctgttcctt gcccgccagc tcgacaacgg caaactcaag
     5341 cctgaaattt tcctgcccat gttggacaag gttttgaccg aagcggattt ccaagccttt
     5401 gccgactggg acaaaatccg tgcggaagaa aacgaggaag aattggcgcg gcagttgcgc
     5461 gggttgcgcc gttatgtggt gtcgcagatt atcgtgcgcg atatcaaccg catcagcgat
     5521 ttgaacgaag taacccgcac gattacgctg tttgccgatt ttgccgtcaa taccgcgctg
     5581 gattttgcct acgcctatta tcgggatatg tacggcacgc cgatcgggcg tgatacgaaa
     5641 tcgccgcagc atttgagtgt ggtggcgatg ggcaaggcgg gcggctatga gttgaacgtg
     5701 tcttccgaca tcgatttgat tttcatctat cccgaatcgg gcgataccga cggtaggcgc
     5761 gaacgcggca atcaggaatt tttcaccaaa gtcgggcaga aactgattgc gttgctgaat
     5821 gacattaccg ccgacgggca ggtgttccgc gtcgatatgc ggctgcggcc ggacggcgat
     5881 tcgggcgcgc tggtattgag cgaaaccgcg ctggagcaat acctgattac gcaggggcgc
     5941 gaatgggaac gttatgcgtg gtgcaaaggc cgcgtgctta cgccgtatcc gaacggcatc
     6001 aaatcgctgg tgcgcccctt cgtgttccga aaatatctgg attacggcgc gtatgaggcg
     6061 atgcgtaagc tgcaccgcca aatccgcagc gaagtcggca aaaaagggat ggcggacaac
     6121 atcaaactcg gcgcgggcgg catccgcgaa gtcgaattta tcgcccagat tttccagatg
     6181 atacgcggcg gacaaatgcg cgcgctgcaa ctgaaaggca cgcaggaaac gctggaaaaa
     6241 ctcgccgaat cgggcattat gccgtctgaa aacgtcgaaa ccctgctcgc cgcctaccgc
     6301 tttttgcgcg atgtcgaaca tcgtttgcaa tattgggacg accggcaaac ccaaaccctg
     6361 ccggcttcgc ccgaacagcg gcaacggctt gccgaaagta tgggatttga tgattacgcc
     6421 gattttttga acgctttaaa tcaacatcga aaccaagtca accggttgtt caacgaaatt
     6481 ttgagcgaac ccggagaaca aacgcaaagc agcggcgaat ggcagtgggt ttggcaggag
     6541 aagcccgatg aagaagggcg gcaatgccgt ctgaaggaac acgggttcga tgccgaaacc
     6601 atcgccgcgc ggctcgacca aatccgcaac gggcataaat accgccgcct ttccgcccac
     6661 gcccagccgc gtttcgacgc gcttgtgccg ttgctggtac aggcggcggc agcgcaaacc
     6721 aacccgaccg atacattgat gcggctgttg gatttcctcg aaaatatcag ccgccgttcc
     6781 gcctatctcg ccttcctcaa cgagcatccg caaaccctgg cgcaactcgc tcagattatg
     6841 agccaaagct catgggtggc ggcgtatctg aacaaatatc cgattttgtt ggacgaactc
     6901 atcagtgcgc aattattaga tacggcgttt gattgggaca aactcgccgc cgaactttca
     6961 gacggcatca aagcctgcgg cggcgacacc gaagcgcaaa tggacaccct gcgccatttc
     7021 caacacgccc aagtcttccg cctcaccgtc caagacctcg ccggattgtg gacggtagaa
     7081 tccctctccg accaactctc cgcccttgcc gacaccgtca ttgccgccgc cctttcgtgc
     7141 gcgtgggcgg atatgcccaa aaaacaccgc gacacaccgc aattcgccat cgtcggctac
     7201 ggcaaacttg gcggcaaaga actcggctac gcctccgacc tcgacttggt ctatctttat
     7261 gacgacccgc atcccgatgc aggcgacgtg tacagccgcc ttgcccgccg cctgaccaac
     7321 tggctttccg ccgccaccgg cgcaggcagc ctctacgaaa ccgacctgcg cctgcgccct
     7381 aatggcgacg ccggtttcct cgcccacagc atcgccgcct ttgaaaaata ccagcgcgaa
     7441 aacgcctgga cgtgggaaca ccaatccctt acccgcgccc gcttcatctg cggcacaccc
     7501 gaaattcaga cggccttcga ccgcatccgc accgaaatcc tcaccgccga acgcgaccaa
     7561 accgccttgt caggcgaaat catcgaaatg cgcgaaaaaa tgttccccac ccatccgcct
     7621 gccgacagca acgtcaaata cgcacgcggc ggcgtggtcg acgtcgaatt tatcgtccaa
     7681 tacctcatcc ttgcccatgc ccgaaaatat ccgcaacttc tcgccaacta cggcaacatc
     7741 gccctcttga atatcgccgc cgactgcagc cttatcgaca aaaacctcgc cgaacaaagc
     7801 cgcaccgcct accgcttcta ccgccggcag caacacaaca ccaaactgcg cgacgcagaa
     7861 aaaaccgaag taagcggcga attgctggca cattacggca atgtcaggaa attgtggcgg
     7921 gaagtgttcg gcgaagaagc ggcaaccgcc tgaacaaaaa atgccgtctg aagcctgaca
     7981 atctgggttt cagacggtat tttcgtaccg tgccgtttta aggttgcggc agagctaaag
     8041 cgatttatcg ggaatggctg aaacccaaaa accggattcc tctttcagtt acagcagctt
     8101 gatccctttc ccttatccaa cgggggaagg ctaggatagg gtggcttgca aatatacaga
     8161 acaagggaca agagccaccc tctctccaac cctctccctc cgtacgggag ggggtggatt
     8221 ctcgcgggcg aagcccacgc tacggttagc ctttacccca gcacaaacaa ttcccgcccg
     8281 tgcgccttca gccaactttt agcattgtcg gtatgcggcg tcagcgtgtt caccaaatgc
     8341 caaaagcgcg gactgtggtc ggggtggcgg aggtggcaga gttcgtggat gcagacatag
     8401 tcggcgacgt attcgggcgt gccgatcagc cgccagttga ggcggatgcc ggtgtgcggg
     8461 cggcatacgc cccaaaaggt tttggcgttg ctcaggtctg tggcggtggg cgtcagtcct
     8521 gtttcggctg cgtgtttttc aaggcggggc agcaggtatt cgcgggcgcg ttcgttcaac
     8581 aggcggcgca ggtggtcgat ttgtgcggcg gtttcttttc ggggaagcag gatttcagac
     8641 gacgtgatac ggatatggct ttggctgtgg gtatccagct tggtctttat tccccgatac
     8701 caaatccact cgggtaagtt tgggtgggaa acaggatgca cgggcgtttt ggcaagcgtg
     8761 ttccgcaaaa tcgtttcgtt tgccgccagc cagtttgcta acgcgtggtc ttgaaaaaag
     8821 ggtgggacgt tgatgctgac cgtctgcata ttgacggggc gcagaatcag atttttcttg
     8881 gcactgcgtt tgagttcgat ttcgatgcac aaaccgtcgg aaagagtata ggtgaagcgt
     8941 ttcatagttg tgaataggtt tcagaccgga tacatcgtct gaaacaggaa ttttccatat
     9001 caggcggcaa acttcggata atatacaaaa tcaaacatct gcgctacaag gttcagccga
     9061 acaagccgcc gatatatttg ctgatggtga tggcgctgag tactgccatc aaaccgacca
     9121 caatcacgcc ggaaacggtg agccacagcg ggtgtttgta gtcgccgaca attttggttt
     9181 tgtaggcggc aatcagaatc agaccgaggg aaatcggtaa aatcaggccg tttaatgcgc
     9241 ctacgaacac cagcacctgc gccggtttgc cgatggtgga aaatacggcg gtggacacgg
     9301 cgataaaggc aataatccat ttgtttttat tgcgttcgat agacgggctg agaccggaga
     9361 agaacgacac cgaagtataa gccgcaccaa tcaccgaagt aatcgaagcc gcccaaatca
     9421 ccacgccgaa aatcagcagg ccgatgtatc ccgccgcata ttcaaacggt gtggaagcag
     9481 ggttgtcggg attgagctgt acgccttggc tgaccacgcc caaaaccgcc aaaaacaata
     9541 caatccgcat aatcgaggca atcaggatcg cccgcaccga gctttggctc acttccggca
     9601 acgccgattt gcctttgata cctgcgtcca gcagacggtg cgcaccggcg aaggtgatgt
     9661 agccgccgac cgtgccgccc accagtgtaa caatcgccat tgcatcgagt ttttccggca
     9721 taaaggtatg cacggcggca tctgccagcg gcggattcgc ctgccatgcc acataaaccg
     9781 tcagcgcaat cattacgaaa cccatcactt gggcgaattt gtccatcact ttgcctgctt
     9841 ctttaaacag aaacacaccg atggcaatca cgccgctgat cacggcaccg gtttccggtg
     9901 acagtccggt cagcaggttc agacccaagc ctgcgccgcc gacgttgcca atattgaacg
     9961 ccaaaccgcc catcacaatc agcacagcca agaaatagcc tgcgccgggc aagacctgat
    10021 tggcaatatc ctgcgcctgt ttttcggaaa cggcgacaat ccgccaaata ttgagctgcg
    10081 ccccgatgtc gagcagaatc gagagcagaa tcacaaagcc gaaacttgcc gccagtgctt
    10141 gggtgaaggt ggcggtttgg gtcagaaagc ccgggccgat ggcggaagtc gccatcagga
    10201 atgcagcgcc gattaaggca tttctgcggt ttttttgatc agacataatc gcttatcctc
    10261 tataaaattg gttgttgctg tgtttgggcg aaacctgcgg ttttagctac gcagaaactc
    10321 gctttgctcg ttttggcgaa acctgcggtt ttcagacggc ctatgaactg tttttcaagc
    10381 agaaactttg atgcctgccg ccagtagttc ctgccggatt ttttcggcaa acaccacggc
    10441 gtgcggcccg tctccgtgca gacagatgct gtcggcttgc acggcaacca ggctgccgtc
    10501 cactgctttg acctgcccgt cccgcaccat ctgcaatact tgggcgatgg cttcttcgtc
    10561 gctgtccacc tgcgcatcgg ggcggctgcg gggaaccagc gtaccgtcgg gcatatagcg
    10621 gcggtcggcg aatacttcgg aaatcacacc caagcctgcg gcttttccgg cttccaagag
    10681 caggctgccg gaaagtgcca tcaatttcaa tttcgggtcg aaatccgcca caattcgggc
    10741 aacggtatcc gccagcgcac ggtttttcgc cgcttgattg tacattgcgc cgtgcggttt
    10801 gacataagcc atttccaaac cctgatcacg gcacaaggcc tgcaatgcgc ccaactggta
    10861 attcagacac gcccgcaaat cggcttcgga cagattcatt tcggtacggc cgaagttttc
    10921 ccgatcggga tagccggggt gtgctccgat gcgcacgccg ttttgttggg catacgccaa
    10981 tgccgcccga atatcggcaa tgctgccggc gtgttgggcg caggcgatgt tggccgaagt
    11041 aatcagctgc aacaaggctt cgtcgctgcc gcagccttcg gcgagatcgg cgtttaaatc
    11101 aacctgcttc atgggtgatt ctccgtattt ggttcagata ggcttggttt ttgcgccgca
    11161 gggcggtggc ttctttcaag ccgattattt tgaatttgac tttgctgccg aagcgcacct
    11221 gtgccagcct gcccaaatcg gcggcggcaa cggtagcgat tttcggataa ccgccggtgg
    11281 tttgcgcatc ggccagcagg ataatcggtt tgccgccggg cggcacctgc acggttcctg
    11341 cctgaacagc gtgggacagc atttccaaag gttgcgacag ggtcagcggc tgtccgtcga
    11401 agcggtagcc catgcggttg ctatcgcttt gcagcgtcca cgtttcccgt tccagattca
    11461 gacgcccttt ttcactgaaa gcggcatatt ccgacgaagg aacaaggtgg acggtatcgg
    11521 taaacggtat cggggcaatg ccgactttgg acaattcctg cgcacctttg ccgatgggga
    11581 gataatcgcc tttttgcagc attctgccct gatggccgcc gaaaccggct ttcaggtcgg
    11641 tacttctcga acccatcact tccggcacat caaatccgcc cgccacgcac acatagccgt
    11701 acatgccctg cacggcacgc accattttca aggtctgccc tttgcgggcg gtataacgcc
    11761 aatacgaata gaccggttcg ccgtccaatt ccgcctgata cacggcaccg gtgagacaaa
    11821 acggcgtatc ccgttcaaac accagcatta tcccgcccaa agcgatttcg attgcggccg
    11881 tgccttcgtc gttgcccaat aaaatattac ccgccgccaa agcaaccgtg tccatcgcac
    11941 cggcatgacc gatgccgtaa cgccggtgtc cgtagcgtcc ggtatcctga atatgcgccg
    12001 gtgcctgcac tgccgaaacg tgaatcatgg ctcaatcctt tctgcaacaa agcggacttg
    12061 gtcacccgcc gccagcaggg tcggcggatt caaatcggct cggaacaagg gtaattcggt
    12121 tctgccgata atctgccagc cgccgggcga agcgaacgga tacacaccgg tctgactgcc
    12181 gccgataccg accgaaccgg caggaacgga cgttctcggc acggcacggc ggggcgtgtg
    12241 caatgcttcg ggcaagccgc ccagataagg gaaaccaggc tggaagccca tcataaatac
    12301 ggtataagtt tgcgccgtat ggcggcggac gatttcggaa ataaccgtct gatggaaagc
    12361 agcgacttcc gccaaatccg ggccgtattc gccgccgtag cagacgggaa tttccaccag
    12421 tttgccctga tggtctgtaa cggcggtgtg ttcccacaca tattgcaatt catcggcaag
    12481 cgtcgccaaa tcggtatcga aacgggtgaa cacggtcaga ttgttcatgc cgaccaccac
    12541 ttcctcaatc ctgtcgtgct gcccgagcgc agcggcaaac gcccacaact tttgctgttt
    12601 gcccagttcg gaaggtgcat tcagtcggca gaccaaagcg gattcgctga ttggtgtgat
    12661 ctctattctc atttgttgtt cattttggtt atgttttaat gaatctatat gcaggggcgg
    12721 cggtttgtca atatcttctg tgctgcatca tcaaaccgtc gattggaaaa gtgctgccct
    12781 gccgctgcac tttttcagac gaccttaaac cgtttctatt aaaatagcgc attccacttt
    12841 tcagacggca tctctatgtt tcccgaccaa tccgccccca acctgctgca aggcttgaac
    12901 cctgaacaac tttccgccgt aacctggccg ccgcaatccg cccttgtgct ggcaggcgcg
    12961 ggcagcggca aaacgcgcgt gctgaccacg cgtatcgcat ggcttttgca aaccggtcag
    13021 gcaagcgtgc acagcattat ggcggtaacg tttaccaaca aagccgccaa agaaatgcaa
    13081 acccgactcg gcgcgatgat tcccgtcgac gtccgcgcta tgtggctcgg cacgttccac
    13141 ggcctctgcc accgctttct acggctgcac caccgcgatg ccggtttgcc gtcttccttt
    13201 caaatcctcg acggcggcga ccagctttcc ctcatcaaac gcctgctcaa aagcctcaac
    13261 atcgccgaag aaatcatcgc gccgcgttcg ctgcaaggct ttatcaacgc gcaaaaagaa
    13321 tccggtttgc gcgcttccgt cttgagtgcg cccgatccgc acacaagccg catgattgaa
    13381 tgctacgccg aatacgacaa aatctgccaa cgcgaaggcg tggtcgattt tgccgaactc
    13441 atgctccgca gctacgaaat gctgcaaagc aacgaaatcc tgcgccagca ttaccaaaac
    13501 cgcttcaacc acattctcgt cgacgagttc caagacacca acaaactgca atacgcctgg
    13561 ctcaaactca tggcgggcgg aaacgcagcg gtatttgccg tcggcgacga cgaccaaagc
    13621 atttaccgtt tccgtggcgc aaacgtcggc aacatgaccg cgctgatgga agaattccac
    13681 atcgacgcgc ccgtcaaact cgaacaaaac taccgctccg tcggcaacat ccttgccgcc
    13741 gccaatgccg tgattgaaaa caacgacgaa cgactcggca aaaacctgcg caccgacgcc
    13801 gaagcaggcg acaaaatccg ctactactcc gcctttaccg acctcgaaga agcccggttc
    13861 atcttggacg aaaccaaagc cctcgaacgc gaaggctggg atttggacga aatcgccgtc
    13921 ctctaccgta gcaacgccca atcccgcgtt atcgaacaaa gcctgttccg cagcggcatc
    13981 ccctacaaaa tctacggcgg cttgcgcttt tacgaacgcc aagaaatcaa acacgcgctc
    14041 gcctacctac gcctcgccgt caatcccgac gacgacaacg cccttttgcg cgtcatcaac
    14101 ttcccaccgc gcggcatcgg cgcacgcacc gtcgagaacc ttcagacggc ctcaaacgaa
    14161 caaggcatca ccctttggca ggcagcctgc aacgccggcg cgaaagccgc caaaatcgcc
    14221 gccttcgtcc gcctgattga agcactgcgc aaccaagtcg gacaactgcc cctgtccgaa
    14281 atcatcgtcg gcatcctcaa agacagcggc ctgaccgaac actaccgcac ccaaaaaggc
    14341 gacaaccaag accgtctcga caaccttgac gaactcgtca atgccgccat cgagttcaaa
    14401 cccgaagaca gcaacttcga aatcctgcct gaaaacattt cagacgaccc agccttcccc
    14461 atcctcgcct tcctaagcaa tgccgccctc gaatccggcg aaaaccaagc aggcgcgggc
    14521 gaaaaagccg tccaactcat gaccgtccac gccgccaaag gcttggaatt taacgccgtc
    14581 ttcctcaccg gcatggaaga aggccgtttc cccagcgaaa tgagccttgc cgagcgcggc
    14641 ggcctcgaag aagaacgccg cctcatgtac gtcgccatca cccgcgcccg caaacgcctc
    14701 tacatcacca tggcgcaaca aagaatgctg cacgggcaaa cccaattcgg catcgtctcc
    14761 cgcttcgtcg aagaaatccc gcccgaagta ttgcactacc tgtccatcaa aaaaaccgcc
    14821 tacgacagct atggcaacac gcgtcaaact gccacgttca aagacaaaat catcgacgac
    14881 tacaaacagc cgcaaaccta cgcaggcttc cgcatcggac aaaacgtccg ccacgccaaa
    14941 tttggcaccg gcgtgattat cgatgccgca gataaaggcg aatccgcccg actgaccatc
    15001 aatttcggca aacagggcgt gaaagagttg gacaccaagt ttgcgaaatt ggaagagatg
    15061 tagaagggag atggcagagg ccgtctgaaa acgggaacaa caatttttgc ccaaacctcc
    15121 gccgtcattc ccgcgcaggc gggaatccag acctttcggc acgggaactt atcggataaa
    15181 aggtttcttt agattccacg ttctagattc ccgcctgcgc gggaatgacg gacggtaaaa
    15241 gccgggtata gatacctaac ccttgtttat agctgaaaat caataaggaa gaacattatg
    15301 tcccaagttt ttaaagattt tgatttgtcc tccgtatggg aatccgacag ttgggcagat
    15361 gaaaactaca aagaagcccc gtttacccct gaaattttgg ctgccgtaga aagtgaactg
    15421 ggctataaat tgccgcaaag ttttattgaa ttgatggcgg tacaaaacgg cggaatattt
    15481 gtcaaaaact gttttccgac cacacagaga aattcgtggg cgaaagatca tgtgcaaatt
    15541 tgcgaggtat cgggcatcgg ctttgaaaaa gaagggagtt tgtgcggcga aacagggcaa
    15601 aaactttgga tggaagaatg ggaatatccg cccatcggcg tgtattttgc caacgacccg
    15661 tcaggcggtc atgccatgtt tgccttggac tatcgggagt gtggaaaaga cggcgagccg
    15721 aaagtggtgt ttgtcgagca agaatcggat tttgaaatcg tcgaacttgc ccccgatttt
    15781 gaaaccttta tccgcagctt gcggcatgaa gatgagttta ttgacgagga aatataaaac
    15841 ggcggttgaa aaaccggaat catcaaggga aaacgggcga aataacggat aatcgcttga
    15901 atccgtaagg aaaacggttt ggtggaacgc gccatccaag acctttgcaa agaaaaactg
    15961 tctccgacag cattgacatt attaacagaa cttatcaagt ttggagctat ctcaaatata
    16021 attcggttat ccttttgtat ccattaaatc atatgcttca attaattgtt gttctagctc
    16081 ttgtaccaat tttgaattgc gaattcctga cacaatctca aattcttctg catctatgca
    16141 aacacctgca taaatttcaa taacaaggga acgcaataat tgaagctctt ctcttgttaa
    16201 agaaataata atgtcatcac ctgtgtaatt gattatattc ataataattt tatttttgtt
    16261 tgtcaaagta agttttgcct aaggttggtc taaatgcagt tccaccatct tttgaatttg
    16321 ggtctctgat tacaattgct ccagacttat catcccaaat tgctcttatg tgtttggatt
    16381 gtaatcttcg aattcccaag aaaaaaatcg taataagttt gaaagtgtca aatcccaagt
    16441 ttcttttgag caatattcta atattttatc aatttcactt ttaataatct tatgatcaaa
    16501 ctgttctaat attaatgcat tagaccaaaa aaaaccttct ttattacaat gatgggaaat
    16561 ccatttagga gaacaaatgc aaagtgaaaa aatagatgag ccttgttctc cttcgattcc
    16621 gatatccaaa tctatccatc tatggaaatt atctggaatt tcgggggtaa atttttcaaa
    16681 atcaatatca tataaattta tgctttttaa atccaattta atcattaggg ctgtcctaga
    16741 taaataggga aattcaaatt aagttagaat tatccctatg agaaaaagtc gtctaagccg
    16801 gtataaacaa aataaactca ttgagctatt tgtcgcaggt gtaactgcaa gaacagcaac
    16861 agagcctgac agcattgttt atacggattg ttatcgtagc tatgatgtat tagatgtgag
    16921 cgaatttagc catttccgta tcaatcacag cacacatttt gctgaacgac aaaaccatat
    16981 caatggaatt gagaattttt ggaaccgggc aaaacgtcat ttacgcaagt ttaacggcat
    17041 tcccaaagcg cattttgagc tgtatttaaa ggagtgcgaa tggcgtttta acaacagtga
    17101 gataaaagtt caaatttcca ttttaaaaca attagtaaaa tcgagtttat cttagttgtc
    17161 caggacagcc ccattatttt tataacaccg tgaagccgca cagcagtttg aacagtgata
    17221 cgccgtttgc gggcttacga gtttattttc ccggcctgca gtttgagcaa tacggtgatt
    17281 tcctacggtt aatacaaatg tttacacatt gatacatttc atttatagtt ccgcctattt
    17341 gaaaatagaa aatatgaatt cgaccgcaag taaaaccctg aaaggattgt cgctggtgtt
    17401 tttcgcctct ggattctgcg ccctgattta ccaggtcagc tggcagaggc ttctattcag
    17461 tcacataggt atcgatttga gttcgattac tgtcattatt tctgtattta tggtcggctt
    17521 gggtgtaggt gcgtatttcg gtggacgcat tgctgaccgt tttccttcaa gtatcatccc
    17581 cctgttttgc atcgctgaag tatccatcgg tctgttcggt ttggtaagca ggggtctgat
    17641 ttccggcttg gggcatcttt tagttgaggc tgatttgccc atcatcgctg ctgccaattt
    17701 cctcttattg ctgcttccta cctttatgat gggcgcgacc ttgcccttgc tgacctgttt
    17761 ttttaaccgg aaaatacata atgttggcga gtctatcggt accttatatt ttttcaacac
    17821 tttgggtgcg gcactcggat cgcttgccgc cgccgaattt ttctacgtct tttttaccct
    17881 ctcccaaacc attgcgctga cagcctgctt taaccttctg attgctgctt cagtatggct
    17941 gcgttacaga aaggatggat atagtgaaca ctaaaccgaa tactagtttg atttatatgc
    18001 tttctttcct tagcggctta ttgagcttgg gtatagaagt cttgtgggtg aggatgtttt
    18061 cgttcgcagc acagtccgtg cctcaggcat tttcatttac ccttgcctgt tttctgaccg
    18121 gtatcgccgt cggcgcgtat tttggcaaac ggatttgccg cagccgcttt gttgatattc
    18181 cctttatcgg gcagtgcttc ttgtgggcgg gtattgccga ctttttgatt ttgggtgctg
    18241 cgtggttgtt gacgggtttt tccggcttcg tccaccacgc cggtatcttc attaccctgt
    18301 ctgccgtcgt cagagggttg attttcccgc tcgtacacca tgtgggtacg gatggcaaca
    18361 aatccggacg acaggtttcc aatgtttatt tcgccaacgt tgccggcagt gcattgggtc
    18421 cggtccttat cggctttgtg atacttgatt tcttgtccac ccaacagatt tacctgctca
    18481 tctgtttgat ttctgctgct gtccctttgt tttgtacact gttccaaaaa agtctccgac
    18541 tgaatgcagt gtcggtagca gtttccctaa tgttcggcat cctcatgttc ctactgccgg
    18601 attctgtctt tcaaaatatt gctgaccgtc cggataggct gattgaaaac aaacacggca
    18661 ttgttgcggt ttaccataga gatggtgata aggttgttta tggggcgaat gtatacgacg
    18721 gcgcatacaa taccgatgta ttcaatagtg tcaacggcat cgaacgtgcc tatctgctac
    18781 cctccctgaa gtctggcata cgccgcattt tcgtcgttgg attgagtaca ggttcgtggg
    18841 cgcgcgtctt gtctgccatt ccggaaatgc agtcgatgat cgttgcggaa atcaatccgg
    18901 cataccgtag ccttatcgcg gacgagccgc aaatcgcccc gcttttgcag gacaaacgtg
    18961 ttgaaattgt attggatgac ggtaggaaat ggctgcgtcg ccatcctgat gaaaaattcg
    19021 acctgatttt gatgaatacg acttggtact ggcgtgccta ttccaccaac ctgttgagtg
    19081 cggaattttt aaaacaggtg caaagccacc ttaacccgga tggtattgta atgtttaata
    19141 ccacgcacag cccgcatgct tttgctaccg ccgtacacag tattccctat gcataccgct
    19201 atgggcatat ggtagtcggc tcggcaaccc cggtagtttt ccctaataaa gaactgctca
    19261 agcaacgtct ctcccggttg atttggccgg aaagcggcag gcacgtattt gacagcagca
    19321 ccgtggatgc tgcagcacaa aaggttgtct ctcgtatgct gattcagatg acggaacctt
    19381 cggctggggc ggaagttatt accgacgata atatgattgt agaatacaaa tacggcagag
    19441 ggatttaacc gtcttaaagg gtttcaggca acgcaggttt taggtaacgt cctgctagtt
    19501 caaaaaaacc gcatcacagc agtcgggaca aaatggttta aacattttgt cccgaattct
    19561 tattcctat
//
LOCUS       DAXHKG010000026        19468 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.026, whole genome shotgun sequence.
ACCESSION   DAXHKG010000026 DAXHKG010000000
VERSION     DAXHKG010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.026"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            299..1627
                     /gene="miaB"
                     /locus_tag="ACFMWP_000702"
     CDS             299..1627
                     /gene="miaB"
                     /locus_tag="ACFMWP_000702"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HFC5891340.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1712..3625)
                     /gene="dxs"
                     /locus_tag="ACFMWP_000703"
     CDS             complement(1712..3625)
                     /gene="dxs"
                     /locus_tag="ACFMWP_000703"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HFC5891341.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGNNRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVAKLPKEGAAQMPSEKEPKPVAKPTYTQ
                     VFGKWLCDRAAADERLIAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAGKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3710..4627)
                     /gene="xerC"
                     /locus_tag="ACFMWP_000704"
     CDS             complement(3710..4627)
                     /gene="xerC"
                     /locus_tag="ACFMWP_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HFC5891342.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCVWLVERGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRRDE"
     gene            4821..5885
                     /gene="fba"
                     /locus_tag="ACFMWP_000705"
     CDS             4821..5885
                     /gene="fba"
                     /locus_tag="ACFMWP_000705"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HFC5891343.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            6043..6864
                     /locus_tag="ACFMWP_000706"
     CDS             6043..6864
                     /locus_tag="ACFMWP_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HFC5891344.1"
                     /translation="MNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLD
                     HKDKSLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIE
                     VDGQLITLESGEFQIYKQDHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAF
                     NQLPSGKAEYHGKAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKA
                     DEKSHAVILGDTRYGGEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            7002..7679
                     /gene="tsaB"
                     /locus_tag="ACFMWP_000707"
     CDS             7002..7679
                     /gene="tsaB"
                     /locus_tag="ACFMWP_000707"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HFC5891345.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETRLFHQEVGSRQSALI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERRARL"
     gene            7676..8116
                     /gene="rimI"
                     /locus_tag="ACFMWP_000708"
     CDS             7676..8116
                     /gene="rimI"
                     /locus_tag="ACFMWP_000708"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HFC5891346.1"
                     /translation="MNIRRAVYADCAALAALDAVCNPSAWTQRQFESALVSLSEQVFL
                     AEKDGGLAAFIVWQNLPDESELHLIATAPECRRQGIASALLEYWFAHLPEGTQRLLLE
                     VRAGNTAAQALYAAHGFSIAGRRKNYYRATDGQTEDAVLMEKIC"
     gene            8110..8844
                     /locus_tag="ACFMWP_000709"
     CDS             8110..8844
                     /locus_tag="ACFMWP_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC5891347.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMP
                     SEQAVANALGQIARELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKHALQAGGS"
     gene            8906..9547
                     /gene="pyrE"
                     /locus_tag="ACFMWP_000710"
     CDS             8906..9547
                     /gene="pyrE"
                     /locus_tag="ACFMWP_000710"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HFC5891348.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9621..10055
                     /locus_tag="ACFMWP_000711"
     CDS             9621..10055
                     /locus_tag="ACFMWP_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HFC5891349.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTCAIGKKQISRDEIAGILNGGTTLHDTPPATAATP
                     AAAPQVAVPPAAPARQEGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10052..11362
                     /gene="argA"
                     /locus_tag="ACFMWP_000712"
     CDS             10052..11362
                     /gene="argA"
                     /locus_tag="ACFMWP_000712"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HFC5891350.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAGGETRRLISSTVAALEGGVHRVQILNGASDGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEISCLAVSPQAQDGGYGERLLAHIIDKARSMGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            11458..13473
                     /locus_tag="ACFMWP_000713"
     CDS             11458..13473
                     /locus_tag="ACFMWP_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HFC5891351.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNQVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEVELPRLPSGALEMTDQPWGGDVVYLAAGDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGIEVRQFWVMSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
     gene            complement(13587..14543)
                     /locus_tag="ACFMWP_000714"
     CDS             complement(13587..14543)
                     /locus_tag="ACFMWP_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC5891352.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRSFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            14779..15744
                     /locus_tag="ACFMWP_000715"
     CDS             14779..15744
                     /locus_tag="ACFMWP_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5891353.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
     gene            16796..17119
                     /locus_tag="ACFMWP_000716"
     CDS             16796..17119
                     /locus_tag="ACFMWP_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC5891354.1"
                     /translation="MQNETINPKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     SSEAV"
     gene            17233..19410
                     /gene="tdfF"
                     /locus_tag="ACFMWP_000717"
     CDS             17233..19410
                     /gene="tdfF"
                     /locus_tag="ACFMWP_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HFC5891355.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDLSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT         4409 a         6033 c         5268 g         3758 t
ORIGIN      
        1 tgttaatcca ctataacgca ggaactgatg ttccctgtcg ccgaaattgc tggtacacgc
       61 acacagcagc aatgccgccc acacagccgg tttcatacac acctcccatt aaagccaaac
      121 attatacagc cgttctgacc gattaaattc atattttaaa acaatattct gtttacaaaa
      181 cccacatcgt gctataatcc gcaccgattt tcagacggca tcgtcatgcc gtctgaaatt
      241 ttttcattcc aacaaccatc agccccgcga ttacggctgc ctgagaaaga cacaaaccat
      301 gaaaaaagta tttatccgta ccttcggctg ccagatgaac gaatacgaca gcgacaaaat
      361 gctcgccgtc ctcgccgaag aacacggcgg catcgaacag gttacccaag ccgacgaagc
      421 cgacatcatc ttgttcaaca cctgctccgt gcgcgaaaaa gcacaggaaa aagtgttctc
      481 cgatttgggg cgcgtgcgtc cgctcaaaga aaaaaacccc ggcctcatca tcggcgttgc
      541 cggctgcgtc gcctcgcaag aaggcgaaaa catcatcaaa cgcgcgcctt atgttgacgt
      601 ggtcttcggc ccgcaaacgc tgcaccgcct gcccaaaatg attgtggaca aagaaaccag
      661 cgggctgtcg caagtcgata tttccttccc cgaaatcgaa aaattcgacc acctgccgcc
      721 cgcccgcgtc gaaggcggcg cggcatttgt atcgattatg gaaggctgtt ccaaatactg
      781 ctcattctgc gtcgtcccct acacgcgcgg cgaagaattc tcccgcccgc tcaacgacgt
      841 attgacagaa atcgccaacc ttgcccagca aggcgtgaaa gaaatcaacc tcttgggaca
      901 aaacgtcaac gcctatcgcg gcgaaatgga cgacggcgaa atctgcgact tcgccaccct
      961 gctgcgcatc gtccacgaaa tccccggcat cgaacgtatg cgcttcacca ccagccaccc
     1021 gcgcgagttt accgactcga ttatcgagtg ctaccgcgac ctgcccaaat tggtttccca
     1081 cctgcacctg ccgattcaaa gcggttccga ccgcgtattg agcgcgatga aacgcggcta
     1141 caccgctttg gaatacaaat ccatcatccg caaactgcgt gccatccgtc ctgatttatg
     1201 cctgagcagc gatttcatcg tcggcttccc cggcgagacc gaacgcgagt tcgagcaaac
     1261 cttgaaactg gtgaaagaca ttgccttcga cttgagcttc gtgtttattt acagtccgcg
     1321 ccccggcacg cctgccgcca acctgcacga cgacacgccg cacgaagaaa aagtgcgccg
     1381 cctcgaagcc ttgaacgaag tcatcgaagc cgaaaccgcg cgcatcaacc aaaccatgat
     1441 cggcacggtt caacgctgcc tggtcgaagg catctccaaa aaagaccccg accaactgca
     1501 agcccgtacc gccaacaacc gcgtcgtcaa cttcaccggc acgcccgaca tgattaacca
     1561 aatgatcgat ttggaaatca ccgaggccta caccttctcc ctgcgcggca aagttgtcga
     1621 agcctaaacc ctcacgccga aaaaatgccg tctgaagcgt ttcagacggc attttgcctt
     1681 gtatcggcag acgacggcgc ggccgggcgg cttaatttgc cgcatcccga tccgacagcc
     1741 acgcgcgcac acgccgttcc accgcttcgg cactcaagcc caaatcgtct aaaagttttt
     1801 tcggatcgcc gtgtccggtt acggtatcgg caacgcccaa aagcaaaacg ggtttgcaga
     1861 taccgtgttt cgccaatact tccagcaccg cgccgcctgc gccgccctgt tcggcgtttt
     1921 cttcaagggt aacgatgcgg tcgtggcttc gggcaaggcg gacaatcaac tcttcgtcta
     1981 tcggtttgac aaagcgcata tcggcgacgg tggcgttcag ttttccggcg accgccaatg
     2041 cgggggcgac catactgccg aaggcaatga atgcggtttt cccaccttcg cggcggataa
     2101 tgcccttgcc gatttccacg gtttccatgc cgtctgaaac cggcgcgccc gtacccgtgc
     2161 cgcgcggata gcggacggcg gcgggcgcat ccgcctgata gcaggtcgaa agcagcaggc
     2221 ggcattcgtt ttcatcgctc ggcgcggcga caatcatatt cggaatgcaa cgcaagaagc
     2281 tcaaatcgta caaaccggcg tgggtcgggc cgtccgcgcc gacgatgccc gcgcggtcga
     2341 cggcaaacaa aacgggtagg ttttgcaggg cgatatcgtg caccagttgg tcgtaggcgc
     2401 gttgtaaaaa ggtggaataa atcgccacga cgggcttcat gccttcgcac gccaaaccgc
     2461 cggcaaaggt aacggcgtgc tgctcggcaa taccgacatc gaaataacgg tcggggaatc
     2521 gttgttcaaa ctccaccagt ccgctgccct cgcgcatcgc gggcgtgatg gcgatcaaac
     2581 gctcgtctgc cgccgcccgg tcgcacagcc atttgccgaa cacttgggta taggtcggtt
     2641 tggcgacggg cttgggttct ttttcagacg gcatttgcgc cgcgccttct ttaggcagct
     2701 tggcgacggc gtggtatttg acggggtcgt tttcggcgag tttgtagccg ttgccttttt
     2761 tggtgatgac gtgcagaagc tgagggcctt tgcggctgcg caagtctttc aatacgtcca
     2821 ccagattttc gacgttgtgt ccgtccacgg ggccggtata gcggaagccg aagttttcaa
     2881 acaaagacag cgactgtttg gcgtgttcgg cttcttcggc aagggttttg attttgtgtt
     2941 cgactttttg ggcaaactcc atcgcgccgg gtattttgtc taataccttg cccgtttgcg
     3001 ctttgacggt actcaacagg ccgtgcatat cgcgcacgac gttgctggca aggtatttcg
     3061 gcagcgcgcc gacgttgggg gaaatcgaca tttcgttgtc gttgaggacg accagcaaat
     3121 ccacatccat atcgcctgcg cagttcaggg cttcaaacgc ctgaccagcc gtcatggctc
     3181 cgtcgccgat gatggcgacg ctgcggcggt tgttgcccaa ctgtttgtcc gcaacggcca
     3241 tgcccaaggc cgcgccgatg gatgtggaag aatgccctac gccgaacgcg tcgtattccg
     3301 actcgctgcg ttttgggaag ccagctaaac cgccgtattg gcgcatggtg tgcatctggt
     3361 ttttcctgcc tgtcaggatt ttgtgcggat agctttggtg tccgacatcc cacaccagct
     3421 tgtcttcggg cgtgtcgtac acatagtgca gggcgatggt cagttcgacc gcgcccagat
     3481 tgctggcgaa atgcccgccg gtctgcccga cagattccag cagaaaggca cgcaactcgc
     3541 cggcaaggcg cggcagctgt tttttgtcca gacggcgcaa atcttgcggg ctgtcaatca
     3601 ggtcgagtag ggggcttggg ttcatggtgt gtctttttta tgtgtcgtcc gggtgcaacg
     3661 gtcaattata tatcaagagc gtgcggctga cggctgattt tgccgtatgt cattcgtccc
     3721 gccgcttggc gcgcgggtgg gcttcgtcat acaggcgggc gatgtggtcg aaatcgagtt
     3781 tggtgtaaat ctgcgtggtc gaaaggctgc tgtgtccgag cagctcctgc accgcccgga
     3841 tgtcgcgcga agcctgcaac aggtgtccgg catagctgtg gcgcatcata tgcggcgaaa
     3901 cgtgtctgcc gtctccgttt tgcgccgccc attgcgccaa acgtttttgg atttggcgtt
     3961 ggctcaggcg cgtgccgttc ctgccggtaa acagggcttt gccgtccgat gccgtctgac
     4021 gcagcggcag atagtttttc agggcttcca cgcttttgcc ggtcagcggc acctgccgct
     4081 gcttgcgccc tttgccggta acgtgtaccc acgcctcgtc caaatagaca tcatctgcat
     4141 tcaagccgtg tatctcgctc acgcgcaaac cgctgccgta catcagctcg aacagggcgt
     4201 gatcgcgcac cgccagcggg tcgccgccgt ccacgggcaa atccagcatc cggttcagcc
     4261 attcctgcgg cagggctttg ggtacgcgct cgggctgctt cggcggtttg atgtcggcgg
     4321 tcgggtcggt atgcagcaga ccgcgttcca ccagccaaac acaatactgc cgccaagacg
     4381 acagcttgcg cgccagcgtc cgcgcattca aaccgcgctg cgacagccgc cgcaacgccg
     4441 ccgtaaaatc gcgccgcgac aagtcctgcg gcacgccgcc tgcatcttca gacggcattt
     4501 gtgccaacag cgcaaacagt tcttccaaat cgcgccggta tgccgccacc gtgtgctccg
     4561 acttgccctc gcgcacgatg ttttccaaat aagcgtcaaa atgcgccgca aacccgtcca
     4621 aaaccataac cgccccacac aaatatcaaa aaaacagtga aaacattatc ataaacgaca
     4681 caccaaaacc ccgaaccgcc caaaatccga cccgtccgcc cgccgttatc gttaacataa
     4741 aatcaatgag ccgtttatgg ttttttgccg caaaaaacat tataatccgc cttatttacc
     4801 tattgcccaa ggagacacaa atggcactcg tatccatgcg ccaactgctt gatcatgctg
     4861 ccgaaaacag ctacggcctg cccgcgttca acgtcaacaa cctcgaacaa atgcgcgcca
     4921 ttatggaagc cgccgaccaa gtcaacgcgc ccgtcatcgt acaggcgagt gcaggtgcgc
     4981 gcaaatatgc gggcgcgccg tttttgcgcc acctgattct ggcggctgtc gaagaatttc
     5041 cgcacatccc cgtcgtgatg caccaagacc acggcgcatc gcccgacgtg tgccaacgct
     5101 ccatccaact gggcttttcc tccgtgatga tggacggctc gctgatggaa gacggcaaaa
     5161 ccccttcttc ttatgaatac aacgtcaacg ccacccgtac cgtggttaat ttctcccacg
     5221 cttgcggcgt atccgtcgaa ggcgaaatcg gcgtgttggg caacctcgaa actggcgaag
     5281 ccggcgaaga agacggtgta ggcgcagtgg gcaaactttc ccacgaccaa atgctcacca
     5341 gcgtcgaaga tgccgtgcgt ttcgttaaag ataccggcgt tgacgcattg gcgattgccg
     5401 tcggcaccag ccacggcgcg tacaaattca cccgtccgcc cacaggcgac gtgttgcgta
     5461 tcgaccgcat caaagaaatc caccaagccc tgcccaatac acacatcgtg atgcacggtt
     5521 ccagctccgt tccgcaagaa tggctgaaag tcatcaacga atacggcggc aatatcggcg
     5581 aaacctacgg cgtgccggtt gaagaaatcg tcgaaggcat caaacacggc gtgcgcaaag
     5641 tcaacatcga taccgacttg cgccttgctt ccaccggcgc ggtacgccgc taccttgccg
     5701 aaaacccgtc cgacttcgat ccgcgcaaat atttgagcaa aaccattgaa gcgatgaagc
     5761 aaatctgcct cgaccgctac ctcgcgttcg gttgcgaagg tcaggcaggc aaaatcaaac
     5821 cggtttcctt ggaaaaaatg gcaaaccgtt atgccaaggg cgaattgaac caaatcgtca
     5881 aataacaggt tgcttgtaaa caaaatgccg tctgaaccgt tgttcggacg gcatttgatt
     5941 tttgcttctt tgacctgcct cattgatgca gtatgcaaaa aaagatacca taaccaaaat
     6001 gtttatatat tatctattct gcgtatgact aggagcaaac ctgtgaaccg aactgccttc
     6061 tgctgccttt ctttgaccgc cgccctgatt ctgaccgcct gcagcagcgg aggcggcggt
     6121 gtcgccgccg acatcggcgc ggggcttgcc gatgcactaa ccgcaccgct cgaccataaa
     6181 gacaaaagtt tgcagtcttt gacgctggat cagtccgtca ggaaaaacga gaaactgaag
     6241 ctggcggcac aaggtgcgga aaaaacttat ggaaacggcg acagcctcaa tacgggcaaa
     6301 ttgaagaacg acaaggtcag ccgcttcgac tttatccgtc aaatcgaagt ggacgggcag
     6361 ctcattacct tggagagcgg agagttccaa atatacaaac aggaccactc cgccgtcgtt
     6421 gccctacaga ttgaaaaaat caacaacccc gacaaaatcg acagcctgat aaaccaacgc
     6481 tccttccttg tcagcggttt gggtggagaa cataccgcct tcaaccaact gcccagcggc
     6541 aaagccgagt atcacggcaa agcattcagc tccgacgacc cgaacggcag gctgcactac
     6601 tccattgatt ttaccaaaaa acagggttac ggcagaatcg aacacctgaa aacgcccgag
     6661 cagaatgtcg agcttgcctc cgccgaactc aaagcagatg aaaaatcaca cgccgtcatt
     6721 ttgggcgaca cgcgctacgg cggcgaagaa aaaggcactt accacctcgc ccttttcggc
     6781 gaccgcgccc aagaaatcgc cggctcggca accgtgaaga taagggaaaa ggttcacgaa
     6841 atcggcatcg ccggcaaaca gtagcatttg aaaaatgccg tccgaacaca ataatttacc
     6901 gttcggacgg catttttgcg ccataccgcc ctaggacacg acggcacggc aggcaagccg
     6961 atttcactat ataatgccgt ctgaaccaac gagagaatgc catgcaagct gatttcaacc
     7021 gccccgtcct cgccgtcgat accggaactt cctatttgtc gctcgcgctg cgcgccgacg
     7081 gcgaaacccg tctgttccat caggaagtcg gcagccgcca gtccgcactg atcctgccgg
     7141 aaatccgcac cctattccga aatgcaggca ttaccgccgc cgatttgggg gcgattgttt
     7201 atgcgaaagg ccccggcgcg tttacgggac tgcgtatcgg tatcggcgtg gcgcaaggtt
     7261 tggcaacgcc gtttgatacg cctttaatcg gcatccccac gctcgatgcc gccgcctcgc
     7321 tgccgccgcc gcaaagctgc atactcgccg ctgcggacgc gcgtatgggc gaagtgtttt
     7381 atgcgtggtt cgacacgctg aaccgccgcc gtttgagcga ttatcaggtc gggcgggcgg
     7441 cagacatccg gctgccggag ggatgtgcct tttcagacgg cataggcagc gcgttcgcgt
     7501 tggaagaaac gccgccgttt tcaggcaaac ccgatatgcc gaccgccgcc gacttcctca
     7561 atctggcggc tgaaggcggt tttcccgccg tcgctgcggc acacgccgag ctgctctacg
     7621 tccgcaacaa aatcgccctg actgccaaag aacaggcgga acggagggcg cgcctgtgaa
     7681 catccgccgc gccgtttatg ccgattgcgc ggcactcgcc gcactcgatg ccgtctgcaa
     7741 cccgtccgcg tggacgcaac gccaatttga gtctgcattg gtttcgctgt ccgaacaggt
     7801 tttcctcgcg gaaaaagacg gcgggttggc cgcctttatc gtttggcaga acctgcccga
     7861 cgaatccgaa ctgcacctga ttgccaccgc gcccgaatgc cgccgccaag gaattgcgtc
     7921 cgccctgctc gaatattggt tcgcacatct gcccgaaggc acgcaacgcc tgctgctcga
     7981 agtccgcgca ggcaacaccg ccgcgcaggc actgtacgcg gcgcacggct tcagcattgc
     8041 gggcaggcgg aaaaactatt accgcgccac cgacgggcaa accgaagatg ccgtcttaat
     8101 ggagaaaata tgttaagcgc gcgctacctc cacctgcacg aagctttggg tttgggtccg
     8161 atgtggctga aacaggccgc tgccgtcctg ccgcccaaaa acacacccgc aaccccggca
     8221 caggcacgtc ctcaaaccgt ccgcgccgcc ccgatccgcc cttcccaacc ccataacggt
     8281 caggcgcggc tcgaaacgat gaaagcgttg gaaaccgccg ccgtacctac gcgcaaaccc
     8341 gcgcctgaaa ccgaaacgcc tctgcccggc ctttcagacg gcatcgcccc cgttcccgcc
     8401 gcttcgggca tcaccaagct tgccgtcgtc agcctttgcc caccgatcga ggatgcggtt
     8461 tacgggcaac tgttccacgg caaagcgggt gtcctgcttg acaacatact caaagccgta
     8521 ggactggatg ccgcttatgt acacaagacc agctgggtga aaaccgccgc cgtcggcaac
     8581 ccgatgccgt ctgaacaggc cgtcgcgaat gcgctgggtc aaatcgccag ggaactcgac
     8641 ggctgccgtg cccccgccgt ccttttcctc gggcaggctt ttgtccagcc tgaacggcaa
     8701 acgatgattg aaactttgtg cggcagccgt cccttcttca tcatcgacca tcccgctcgg
     8761 cttttacgcc aacccgaact taaagcccga aactggcagg tgttgaaaca gttgaaacac
     8821 gccttgcagg caggcggcag ttgaagcagg ccgcacgggg cggtagaatc gcaactgcgt
     8881 cccaatatct gacagaaagc acaaaatgac cgatttccgc caagatttcc tcaaattctc
     8941 cctcgcccaa aatgttttga aattcggcga attcaccacc aaagccggac ggcggtcgcc
     9001 ctatttcttc aatgccggcc tctttaacga cggcttgtcc acgctgcaac tggcaaaatt
     9061 ctatgcacaa tccatcattg aaagcggcat ccgattcgat atgctgttcg gtcccgccta
     9121 caaaggtatt attttggcgg cggcaaccgc gatgatgctg gcggaaaaag gcgtgaacgt
     9181 cccgtttgcc tacaaccgca aagaagccaa agaccacggc gaaggcggcg tgttggtcgg
     9241 cgcgccgctt aaagggcgcg tgctgattat cgacgacgtg atttccgccg gcacatccgt
     9301 acgcgaatcg atcaaactga ttgaagcgga gggtgcaacc cccgccggtg tcgccatcgc
     9361 gctcgaccgc atggaaaaag gcacgggtga attgagcgcg gttcaggaag tggaaaaaca
     9421 atacggtctg cccgtcgccc ccatcgccag cctgaacgat ttgtttattc tgttgcaaaa
     9481 caaccccgaa ttcggacagt tcctcgaacc cgtccgagcc taccgtcggc agtacggcgt
     9541 agaataaaaa caaagcatat gccgtccgaa ccgccttacg cctcagacgg catcaaacct
     9601 gacacacacg aggaaatacc atgcccgcct gtttctgccc ccactgcaaa acccgtctct
     9661 gggtcaaaga aacccaactc aatgtcgccc aaggcttcgt cgtctgccaa aaatgcgaag
     9721 gactgtttaa agccaaagac catttggcaa gcacgaaaga acccatattc aacgatttgc
     9781 ccgaggctgt ttcggatgtc aaactcgttc accgcatcgg cacgtgcgcc attggcaaga
     9841 aacagatttc ccgcgacgaa atcgccggca tcctcaacgg cggtacaacc ctgcacgata
     9901 cgccgcccgc aaccgccgcc acccctgccg ccgcaccgca ggttgccgta ccgcccgccg
     9961 cgcctgcccg tcaggaaggg ttcaactgga cgattgcaac cctgtttgcc cttatcgtcc
    10021 tcattatgca gctttcctac ctcgtcatcc tatgatcgtg cccgacctct ttgtcgccca
    10081 cttccgcgaa gccgtcccct acatccgcca aatgcgcggc aaaacgctgg tcgccggcat
    10141 agacgaccgc ctgctcgaag gtgatacctt aaacaagctc gccgccgaca tcgggctgtt
    10201 gtcgcaactg ggcatcaggc tcgtcctcat ccacggcgcg cgccacttcc tcgaccgcca
    10261 cgccgccgcg caaggccgca cgccgcatta ttgccggggc ttgcgcgtta ccgacgaaac
    10321 ctcgctcgaa caggcgcagc agtttgccgg caccgtccgc agccgttttg aagccgcatt
    10381 gtgcggcagc gtttccgggt tcgcgcgcgc gccttccgtc ccgctcgtat cgggcaactt
    10441 cctgaccgcc cgtccgatag gtgtgattga cggaaccgat atggaatacg cgggcgttat
    10501 ccgcaaaacc gacaccgccg ccctccgttt ccaactcgac gcgggcaata tcgtctggct
    10561 gccgccgctc ggacattcct acagcggcaa gaccttctat ctcgatatgc ttcaaaccgc
    10621 cgcctccgtc gccgtctcgc ttcaggccga aaaactcgtt tacctgaccc tttcagacgg
    10681 catttcccgc cccgacggca cgctcgccga aaccctctcg gcacaggaag cgcaatcgct
    10741 ggcggaacac gccggcggcg aaacgcgacg gctgatttcg tccaccgttg ccgcgctcga
    10801 aggcggcgtg catcgcgtcc aaatcctcaa cggtgcctcc gacggcagcc tgctgcaaga
    10861 actcttcacc cgcaacggca tcggcacatc cattgccaaa gaagccttcg tctccatccg
    10921 gcaggcgcac agcggcgaca tcccgcacat cgccgccctc atccgcccgc tggaagaaca
    10981 gggcatcctg ctgcaccgca gccgcgaata cctcgaaaac cacatttccg aattttccat
    11041 cctcgaacac gacggcaacc tgtacggttg cgccgccctg aaaacctttg ccgaagccga
    11101 ttgcggcgaa atctcctgcc ttgccgtctc gccgcaggca caggacggcg gctacggcga
    11161 acgcctgctt gcccacatta tcgataaggc gcgcagtatg ggcataagca ggctgttcgc
    11221 cctctccaca aataccggcg aatggtttgc cgaacgcggc tttcagacgg catcggaaga
    11281 cgagttgccc gaaacgcggc gcaaagacta ccgcagcaac ggacgaaact cgcatattct
    11341 ggtacgtcgc ctgcaccgct gaccgcaacg gaaagccgcc gcagaaatgc cgtctgaacc
    11401 ccgtttcaga cggcatttcc ccgattataa agacctgccc aaccctcaag gaccccgatg
    11461 aaatcctacc ccgaccccta ccgccatttt gaaaacctcg attccgccga aacgcaaaac
    11521 ttcgctgctg aagcgaatgc cgaaacgcgc gcgcgttttt taaacaacga caaggcgcgc
    11581 gcgctttcag acggcatttt gaatcaaatg caggacacgc ggcagattcc gttttgtcag
    11641 gaacaccgcg cgcggatgta ccatttccat caggacgcgg aatatccgaa gggcgtgtac
    11701 cgcgtgtgca cggcggcgac ctaccgttcg ggctatccgg agtggaaaat cctgttttca
    11761 gtggcggact tcgacgaatt gctcggcgac gatgtatatt tgggcggcgt gtcgcacttg
    11821 gtggaaaagc ccaaccgcgc gttgttgaca ctaagcaaat caggcggcga tacggcgtac
    11881 acgctggaag tggatttgga agcaggggaa ttggtagaag gtggttttca ctttccggca
    11941 ggcaaaaacc aagtgtcgtg gcgcgatgaa aacagcgtgt gggtgtgtcc ggcttgggac
    12001 gaacgccagt tgaccgaatc gggctatccg cgtgaggtgt ggctggtgga acgcggcaag
    12061 agtttcgagg aaagcctgcc tgtgtatcaa atcgataaag atgcaatgat ggtgaacgcg
    12121 tggcgttatc tcgatccgca gggttcgccg attgatttga ttgaagcgtc ggacggtttt
    12181 tacaccaaaa cctatttgca ggtgtcggcc gaaggcgagg cgaaaccgtt aaacctgccc
    12241 aacgattgcg atgtggtcgg ctatctggcg gggcatcttt tgctgacgct gcgcaaggac
    12301 tggaaccgcg cgaaccaaag ctatccgagc ggtgcgctgg tggcggtgaa gctgaatcgg
    12361 ggtgaactcg gggcggcgca gcttttgttt gcgcctgatg aaacgcaggc attggaaagc
    12421 gtggaaacga ccaagcgttt tgtggtggcg agcctgctgg aaaacgtaca aggccgtctg
    12481 aaagcgtggc gttttgccga cggcaaatgg caggaagtcg aactgccgcg cctgccttcg
    12541 ggcgcgttgg aaatgaccga ccagccttgg ggcggcgacg tggtttacct tgccgccggc
    12601 gatttcacca caccgctgac gctgtttgcg ctggatttga acgtgatgga actgaccgtc
    12661 atgcgccgcc agccgcagca gttcgattca gacggcatcg aagtgcggca gttttgggtg
    12721 atgtcgtccg acggcgaacg catcccttat ttccacgtcg gcaaaaacgc cgcgcccgac
    12781 acgccgacgc tggtttatgc ctacggcggt ttcggcgtac ccgagctgcc gcattatctg
    12841 ggcagcatcg gcaaatactg gctggaagag ggcaacgcct tcgtgttggc gaacatacgc
    12901 ggcggcggcg agttcggccc gcgctggcat caggcggcgc agggaatcag caaacacaaa
    12961 agcgtcgatg atttgcttgc cgtcgtgcgc gatttgtccg agcgcggcat cagttcgccc
    13021 caacacatcg gtttgcaggg cggcagcaac ggcggcctga ttaccgccgc cgccttcgtg
    13081 cgcgaaccgc aaagcatagg cgcactggtg tgcgaagtgc cgctgaccga catgatccgt
    13141 tatccgctgc tctccgccgg ttcaagctgg acagacgaat acggcaatcc gcaaaaatac
    13201 gaagtctgca aacgccggtt gggcgaattg tcgccgtatc acaatctttc agacggcatc
    13261 gattatccgc ccgcgctcat caccaccagc ctcagcgacg accgcgtcca tcccgcccac
    13321 gcgctcaagt tttacgccaa actgcgcgaa acctcgccgc aatcttggct ctactcgcct
    13381 gacggcggcg gccataccgg caacggcacg cagcgcgaag ccgccgacga actcgcctgc
    13441 gtgttgctgt ttttgaaaga gtttttgggc taagggcggg gagcggcact gccgccgcga
    13501 atgaaaaaag gtcgtctgaa actgcttttt cagacgacct tttttaatgg ttgtttcaaa
    13561 tcaaaatatc tatgccgccg gccccatcag cacttcttca catccgaagg caaaaatccg
    13621 taatgccgtc tgaacgcttc gttgaaccgt cccgcgtggc ggtagccgca aaagtgcatg
    13681 gcggcttgga cggtgctgcc ggattcgatg agggcgagcg cgtgttccag ccgcaggcgg
    13741 cgcaggcatc cggcgacggt ttcgccggtt tgcgctttga aatagcgttt caggtagcat
    13801 tcgttcagtc cgacgcggcg ggcgatttcg gcgatggtca gcggacgggc gaattcgtgt
    13861 tgcaggatgt cggcggcttc gtctatgcgc cgacggcggt aaccgttgtc gtggcggcgg
    13921 aaggtgaagc gcaataatcg ggcggagagt tccagcgcgg cggcttcgtc ggcaagcagg
    13981 ccgaagccgt ccgattcgaa cgagcgttgc agcagtgggc aggccgccgc cgtcagtgcc
    14041 gctgcgtttt gcgccagccg ttgcagggcg aatcggccta tcgtttgcgg cgaaaacagg
    14101 cgttcgtcca gcaagccttc gtcgtgccag cggcgcagtt tttccagcga aaaatccaaa
    14161 tgcagcgcgc acatgccgct gttgtcgggc agcagggttt cggatacgtc cgccaactcg
    14221 ccgcgtacca gccagatttc gccggcagac gggcggtatt ccctgccgcc catttgtaac
    14281 cggttctgcc ccgacaccat gacgaacaag gcgcagttgt ggctgaaatt gtggatttcg
    14341 gtgggaaacg cgcccgttcc gccgccgcgc atccgcgaca aggtgatgcc cgagtcgaag
    14401 cggttgatgc acatttccag atgcaaaccg ggctgttttg cctgcgcaat gagcgcgctg
    14461 tcggaacagc cgtccaacgc ccagccggat ttatcggagc ggacataggt ttggtactgg
    14521 cggtagatgg cggcggtgtt catgattgga taggaacgag ttgtctaaca aatgaattaa
    14581 ataggaatta ttaccaataa tcaagcgcag ggattggttg aaacggaaaa ggtcgtctga
    14641 aagggtgttt cagacgacct tttccgtatc gggaatttgt tttgccgtat cgggaatttt
    14701 gcgttttgcg gcgtggtttc tgcaggttgt ttgcttaata ataaacattc ttattcgtat
    14761 gcaaaggaac cgcacaccgt gaaaccgcgt ttttattggg cagcctgcgc cgtcctgctg
    14821 accgcctgtt cgcccgaacc tgccgccgaa aaaactgtat ccgccgcatc cgcatctgcc
    14881 gccacactga ccgtgccgac cgcgcggggc gatgccgttg tgccgaagaa tcccgaacgc
    14941 gtcgccgtgt acgactgggc ggcgttggat acgctgaccg aattgggcgt gaatgtgggc
    15001 gcaaccaccg cgccggtgcg cgtggattat ttgcagcctg catttgacaa ggcggcaacg
    15061 gtggggacgc tgttcgagcc cgattacgaa gccctgcacc gctacaatcc tcagcttgtc
    15121 attaccggcg ggccgggcgc ggaagcatat gaacagttgg cgaaaaacgc gaccaccata
    15181 gatctgacgg tggacaacgg caatatccgc accagcggcg aaaagcagat ggagaccttg
    15241 gcgcggattt tcggcaagga agcgcgcgcg gcggaattga aggcgcagat tgacgcgctg
    15301 ttcgcccaaa cgcgcgaagc cgccaaaggc aaaggacgcg ggctggtgct gtcggttacg
    15361 ggtaacaagg tgtccgcctt cggcacgcag tcgcggttgg caagttggat acacggcgac
    15421 atcggcctac cgcctgtaga cgaatcttta cgcaacgagg ggcacgggca gcctgtttcc
    15481 ttcgaataca tcaaagagaa aaaccccgat tggattttca tcatcgaccg taccgccgcc
    15541 atcgggcagg aagggccggc ggctgtcgaa gtattggata acgcgctggt acgcggcacg
    15601 aacgcttgga agcgcaagca aatcatcgtc atgcctgccg cgaactacat tgtcgcgggc
    15661 ggctcgcggc agttgattca ggcggcggag cagttgaagg aggcgtttga aaaggcagaa
    15721 cccgttgcgg cggggaaaga gtagggagtc gtctgaaaac ggagtttccg aaggaagcgg
    15781 ggggtttctg cgaagctaaa gtgcggtttc aacgaattga aaagcagcct gtatgttgaa
    15841 aataccgctc aagcaaacct acggtttgcc gccctctccc tagccctctc ccacagggag
    15901 aggggattgg ggtgcaggct gcctttaagg tttaggcaaa tttttaactt cgttgaagct
    15961 gcgatttcag aagctccgtt ttagcttcgc agaaactccg cttccttcga aagctccgtt
    16021 ttcagacgac cttttggagt accgcaggca cacgcatcga acggctgaat caaagattca
    16081 gaccgatggc agtccgcacc cgagtttatg cggcaaacag cgaggctacg gcaacccgtc
    16141 ccctctccct gtgggagagg gttagggaga gggcagtaag ccgtaggctt acatcaaagc
    16201 cgataacgct ttcacaaagc ctgtgtgcac tgaaaactga aaggtcgtct gaaaacggag
    16261 ctttcgaagg aagcagagtt tctgcgaagc taaaaccgaa gctgcaaaaa atcgaaaagc
    16321 agcctgcacg ttgaaaatgc cgcccaagca aacctgcggt ttgccgccct ctccctagcc
    16381 ctctcccaca gggagagggg attggggtgc aggctgtctt taaggttcag gcaaattttt
    16441 aacttcgttg aaactgcgat ttcagaagct ccgttttagc ttcgcagaaa ctccgcttcc
    16501 ttcgaaagct ccgttttcag acgacctttt ggaacaccac aggcacacgc atcgaacggc
    16561 tgaatcaaag attcagaccg atggcagtcc gcacccgagt ttatgcggca aacagcgagg
    16621 ctacggcaac ccgtcccctc tccctgtggg agagggttag ggagagggca gtaagccgca
    16681 ggcttacatc aaagccgata acgcttccgt tacaactccg cccactgaaa gcagcctgca
    16741 acgaagccaa aacgacaaac cgcatcgtaa accacccaac ccataggaga accccatgca
    16801 aaacgaaacc atcaacccga aacagcacct tgccgccatc aaagaatact ggcagcccga
    16861 aatcatcaac cgccacgggt tccaattccg cttggtcaaa cttttgggcg attacggctg
    16921 gcatacgcac ggatacagcg acaaagtgct gtttgccgtg gagggcgaca tggcggtgga
    16981 cttcgccgac ggcggcagca tgacgatacg cgagggcgag atggcggtcg tgccgaagtc
    17041 ggtgtcgcac cgcccgcgtt cggaaaacgg ctgctcgttg gtgctgattg agttgtccga
    17101 ctcgtccgag gccgtctgaa aacgaagttt ccgaaggaag ctgagtttct gcgaagctaa
    17161 aagcagcctg caccttcaat caatatgccg aaaatacaac cccaccgcac accaacacac
    17221 aaaggaaatc ccatgacacg cttcaaatat tccctgctgt ttgccgccct gttgcccgtg
    17281 tacgcgcagg ccgatgtttc tgtttcagac gaccccaaac cgcaggaaag cactgaattg
    17341 ccgaccatca ccgttaccgc cgaccgcacc gcgagttcca acgacggcta cactgtttcc
    17401 ggcacgcaca ccccgctcgg gctgcccatg accctgcgcg aaatcccgca gagcgtcagc
    17461 gtcatcacat cgcaacaaat gcgcgaccaa aacatcaaaa cgctcgaccg cgccctgttg
    17521 caggcgaccg gcaccagccg ccagatttac ggctccgacc gcgcgggcta caactacctg
    17581 ttcgcgcgcg gcagccgcat cgccaactac caaatcaacg gcatccccgt tgccgacgcg
    17641 ctggccgata cgggcaatgc caacaccgcc gcctatgagc gcgtagaagt cgtgcgcggc
    17701 gtggcggggc tgctggacgg cacgggcgag ccttccgcca ccgtcaatct ggtgcgcaaa
    17761 cgcccgaccc gcaagccatt gtttgaagtc cgcgccgaag cgggcaaccg caaacatttc
    17821 gggctgggcg cggacgtatc gggcagcctg aacaccgaag gcacgctgcg cggccgcctg
    17881 gtttccacct tcggacgcgg cgactcgtgg cggcagcgcg aacgcagccg cgatgccgaa
    17941 ctctacggca ttttggaata cgacatcgca ccgcaaaccc gcgtccacgc aggcatggac
    18001 taccagcagg cgaaagaaac cgccgacgcg ccgctcagct acgccgtgta cgacagccaa
    18061 ggttatgcca ccgccttcgg cccgaaagac aaccccgcca caaattgggc gaacagccgc
    18121 caccgtgcgc tcaacctgtt tgccggcatc gaacaccgct tcaaccaaga ctggaaactc
    18181 aaagccgaat acgactacac ccgcagccgc ttccgccagc cctacggcgt agcaggcgtg
    18241 ctttccatcg accacaacac cgccgccacc gacctgattc ccggttattg gcacgccgac
    18301 ccgcgcaccc acagcgccag cgtgtcattg atcggcaaat accgcctgtt cggccgcgaa
    18361 cacgatttaa tcgcgggtat caacggttac aaatacgcca gcaacaaata cggcgaacgc
    18421 agcatcatcc ccaacgccat tcccaacgcc tacgaatttt cccgcacggg cgcctatccg
    18481 cagcctgcat cgtttgccca aaccatcccg caatacggca ccaggcggca aatcggcggc
    18541 tatctcgcca cccgtttccg cgccgccgac aacctttcgt tgatactcgg cggcagatac
    18601 agccgttacc gcaccggcag ctacgacagc cgcacacaag gcatgaccta tgtatccgcc
    18661 aaccgtttca ccccctacac aggcatcgtg ttcgacctga ccggcaacct gtcgctttac
    18721 ggctcgtaca gcagcctgtt cgtcccgcaa tcgcaaaaag acgaacacgg cagctacctg
    18781 aaacccgtaa ccggcaacaa tctggaagcc ggcatcaaag gcgaatggct tgaaggccgt
    18841 ctgaacgcat ccgccgccgt gtaccgcgcc cgtaaaaaca acctcgccac cgcagcagga
    18901 cgcgacctga gcggcaacac ctactaccgc gccgccaacc aagccaaaac ccacggctgg
    18961 gaaatcgaag tcggcggccg catcactccc gaatggcaga tacaggcagg ttacagccaa
    19021 agcaaaaccc gcgaccaaga cggcagccgc ctgaaccccg acagcgtacc cgaacgcagc
    19081 ttcaaactct tcactgccta ccactttgcc cccgaagccc ccagcggctg gaccatcggc
    19141 gcaggcgtgc gctggcagag cgaaacccac accgaccctg ccacgctccg catccccaac
    19201 cccgccgcca aagcccgcgc cgccgacaac agccgccaaa aagcctacgc cgtcgccgac
    19261 atcatggcgc gttaccgctt caatccgcgc gccgaactgt cgctgaacgt ggacaacctg
    19321 ttcaacaaac actaccgcac ccagcctgac cgccacagtt acggcgcact gcggacagtg
    19381 aacgcggcgt ttacctatcg gtttaaataa ggtcgtctga aaacggagtt tctgcgaagc
    19441 tatagtggat taacaaaaac cagtacgg
//
LOCUS       DAXHKG010000027        19179 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.027, whole genome shotgun sequence.
ACCESSION   DAXHKG010000027 DAXHKG010000000
VERSION     DAXHKG010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19179
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.027"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(239..2014)
                     /gene="ptsP"
                     /locus_tag="ACFMWP_000718"
     CDS             complement(239..2014)
                     /gene="ptsP"
                     /locus_tag="ACFMWP_000718"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HFC5891356.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYNAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRILLGMGLRRFSMNPNNILPVKNIILHSNIAQLENEIAKIVRCEDE
                     EKAEKLIKQMNSVSVEEEADFKGRK"
     gene            complement(2014..2283)
                     /locus_tag="ACFMWP_000719"
     CDS             complement(2014..2283)
                     /locus_tag="ACFMWP_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HFC5891357.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            complement(2352..2789)
                     /locus_tag="ACFMWP_000720"
     CDS             complement(2352..2789)
                     /locus_tag="ACFMWP_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HFC5891358.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            complement(2870..3433)
                     /locus_tag="ACFMWP_000721"
     CDS             complement(2870..3433)
                     /locus_tag="ACFMWP_000721"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HFC5891359.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            complement(3502..4326)
                     /locus_tag="ACFMWP_000722"
     CDS             complement(3502..4326)
                     /locus_tag="ACFMWP_000722"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HFC5891360.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLVSRQGYVFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     ASSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRYGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRVRTDR"
     gene            4418..5050
                     /locus_tag="ACFMWP_000723"
     CDS             4418..5050
                     /locus_tag="ACFMWP_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFC5891361.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFTLPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            complement(5257..7041)
                     /gene="rmuC"
                     /locus_tag="ACFMWP_000724"
     CDS             complement(5257..7041)
                     /gene="rmuC"
                     /locus_tag="ACFMWP_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HFC5891362.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQHDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQSSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERSNETTALSESLEYAAEDEAV"
     gene            complement(7380..8168)
                     /locus_tag="ACFMWP_000725"
     CDS             complement(7380..8168)
                     /locus_tag="ACFMWP_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HFC5891363.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            complement(8183..9532)
                     /locus_tag="ACFMWP_000726"
     CDS             complement(8183..9532)
                     /locus_tag="ACFMWP_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HFC5891364.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            complement(9551..10132)
                     /gene="petA"
                     /locus_tag="ACFMWP_000727"
     CDS             complement(9551..10132)
                     /gene="petA"
                     /locus_tag="ACFMWP_000727"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HFC5891365.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            complement(10255..11004)
                     /locus_tag="ACFMWP_000728"
     CDS             complement(10255..11004)
                     /locus_tag="ACFMWP_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HFC5891366.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            11135..12064
                     /locus_tag="ACFMWP_000729"
     CDS             11135..12064
                     /locus_tag="ACFMWP_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC5891367.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHDLLPQVTDAERDLARIIEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPIWPQIELDIVSGFQADPIGLLLQHRADLAIVSEAEKQNGIS
                     FQPLFAYEMVGICAPDHPLAAKTVWEAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            complement(12320..12712)
                     /gene="rpsI"
                     /locus_tag="ACFMWP_000730"
     CDS             complement(12320..12712)
                     /gene="rpsI"
                     /locus_tag="ACFMWP_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HFC5891368.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(12722..13153)
                     /gene="rplM"
                     /locus_tag="ACFMWP_000731"
     CDS             complement(12722..13153)
                     /gene="rplM"
                     /locus_tag="ACFMWP_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HFC5891369.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(13331..13510)
                     /gene="ssrS"
                     /locus_tag="ACFMWP_000732"
     ncRNA           complement(13331..13510)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACFMWP_000732"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(13516..13821)
                     /locus_tag="ACFMWP_000733"
     CDS             complement(13516..13821)
                     /locus_tag="ACFMWP_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HFC5891370.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(13832..14161)
                     /locus_tag="ACFMWP_000734"
     CDS             complement(13832..14161)
                     /locus_tag="ACFMWP_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891371.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(14216..15205)
                     /locus_tag="ACFMWP_000735"
     CDS             complement(14216..15205)
                     /locus_tag="ACFMWP_000735"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HFC5891372.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(15328..18030)
                     /gene="ppc"
                     /locus_tag="ACFMWP_000736"
     CDS             complement(15328..18030)
                     /gene="ppc"
                     /locus_tag="ACFMWP_000736"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HFC5891373.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEGNPDTLTALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPDKAKIIFGMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            18073..18966
                     /locus_tag="ACFMWP_000737"
     CDS             18073..18966
                     /locus_tag="ACFMWP_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC5891374.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGCTQAAEALKILLDVGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGTER"
BASE COUNT         4113 a         5218 c         5091 g         4757 t
ORIGIN      
        1 aaagcgggaa tctagaacgt aaaatctaaa gaaaccgttt tacccgacaa gtttccgtgc
       61 cgacagacct agattcccgc ctgcgcggga atgacggatt ttaggtttct gattttggtt
      121 ttctgttttt gagggaatgg ccgattttgg gtttctgttt cggttttcta ttttgcagga
      181 atggcaaaat ttcagattgc gggcattgtt aagtatttct attttttacc tgccgtattt
      241 atttccgccc cttgaagtcg gcttcttcct cgacagacac gctgttcatc tgtttgatca
      301 gcttttccgc cttttcctcg tcctcgcagc ggacgatttt ggcaatctcg ttttcgagct
      361 gtgcgatatt gctgtgcagg atgatgtttt tgacgggcag gatgttgttc ggattcatgg
      421 aaaaacggcg cagccccata ccaagcagga tgcgggtaaa cgccgtatcg cccgccatct
      481 cgccgcatac ggacacgtct ttgtccatgc ggttggcggt gcggatgacg tgttgcagca
      541 ttttcagcac ggcgggatgt ccgggctggt aaagatggct gacgctgtcg tcgccgcgat
      601 cgacggacaa gatgtattga atcaggtcgt tggtgccgac ggagatgaaa tcgaccagtt
      661 tcaaaatact gccgacggtc agcgcggcag acggaatttc aatcatacag ccgatgccga
      721 ctttaccgaa ggcatcgccg cgttcggcaa gctggcgttg cgcggtgtcg aggtggatga
      781 ggcactggcg cacttcggat acggaggtaa tcatcggcca catcatgcgg acgggaccgt
      841 gtaccgccgc acggaggatg gcgcgcatct gggtgcggaa catgaccggt tcggcaaggc
      901 acaggcggat gccggtcatg cccagcgcgg ggttgaggct gccgttgggc gtgctgtttt
      961 tcccgaacca gcgcgggttt ttgtccactc ccaaatcgac tgtccgtatc gttacgcttt
     1021 tgcccttcat ttttttgaca atcgcgttgt acacttcgta ctgctcgtct tcagacggca
     1081 tcgtatcgcg gttgaggtaa agaaactcgc tgcggaacag cccgatgccg tctgcgccga
     1141 ggttgtgcag cggtttcacg tcttcggcgg attctatatt gcccacaagc tcgatgcaga
     1201 ccccgtcggc ggtggcggcg gcggtttttt tgagcttgtt caaatcgcgt ttgtggctgc
     1261 ggtattcgcg ggcacggcgg cggtattcgt tcaacaccga ctcatccggc gcgataatca
     1321 acacgccgtt gataccgtcc acaatgaccg tttcgccttc ggtaatcagt ttgcgcgcgt
     1381 tgtgcagccc gacgacggac gggatgtcca agctcctgcc caaaatcgcc gtatgcccgg
     1441 tggggccgcc ggcatcggta acgaaggcgg caatgcgctg ctctttaaac aaaaccgtgt
     1501 cggcgggcga aaggtcgttt gcaatcagaa cggtttcgtc aaacaggttg tcggcaactt
     1561 ccaactcgtt gccctgcccg atcaggttgt tgtggatgcg gcggacgact tgcagcatat
     1621 cctgcttgcg ttcgcgcaaa taggcatcgt ccatattgtc gaattgggcg gcgagtttgt
     1681 cgctctgctg cttcaatgcc cactcggcgt tgattttttg ttcccttaaa atatcgacgg
     1741 gttcgcgcga caaggtaaca tcggtcaaga gcatcaggtg cagcgagatg aacgcgccca
     1801 actcggtcgg ggcgttttcg ggaatcgcgc tgcggagctg ttccaactct ttgcgcgtgg
     1861 ctttgacggc ggcatcgaaa cgttcggctt cggcatcggt gtccgcctcc gcaacatcat
     1921 actgcggcac ttcctccgta ccgcgcgcaa tcaggtgggc gcaaccgacg gcaatgcctt
     1981 tgcccgccgc cacgccgtgc agcacgatac tcattattcg ccctcgccga agtagccgtt
     2041 gattaagtcg gtcagggcgc gcatcgcttc cgcctcgtcc gcgccgtcgg tttccagctc
     2101 gatgaccgta cccttggcgg cggcgagcat catcagcccc ataatgcttt tgccgttgac
     2161 gcggctgtcg tttttcgtaa cccagacttc gcttttgaat tgggacgcgg tttgggtgaa
     2221 cttgttggac gcgcgggcgt ggagtccgag tttgttgatg atttcgatgg attgtttgag
     2281 catttcggtt cccgtgttat gtatatcggc agcagacgcc gtttaaaatg ttttcctgcc
     2341 ctgccgcttc ttcagacggc atcgccgctg cgccggcaca ccaaatcttc gggcgcggac
     2401 gtgatggcga aaatgccttt tacagccgcc tctctgacac attcggtaaa ggcggcaagg
     2461 tcttccgccg ccggcgaata ttggacggcc ttaaccatca tcggcgcgtt cagcccggtc
     2521 aaaatcgccg atttgttttc gcgcacgagg cggcgggcgg cattgcaggg ggtcgcgccg
     2581 aagatgtcgg tcataatcag cacgccgtcg ttgtcgggaa attcctgaag cgcggcaatg
     2641 gcgttgttga tgatgtcgtc ttggtcttcc gtcggttgca cgccgagtat gcggacgttt
     2701 tcaggcagcc cgcccgggaa aaaatgatgt gccagcttgc ggtaggcttc gcctatggtt
     2761 tcgtgtgtga tgattaaaag ccctatcata ttatgcgtcc tgttcctcgt tgtcctgccg
     2821 gcgtatgggc gcaatgccgt ctgaaaggca ttcagacggc atcgcgtcct tattttccgt
     2881 ccaatgcgta aatctcgccc agattgcgcc agcagcccgc cgcatccatg ccgtaaccga
     2941 aaacataacg gttcggcaca tccagtccga cataatcggc tcggataggc ttgggtttgt
     3001 cgatcagctt gttggcgaac accgccgcac ggcagcttgc cgcacccatt tccaaaagtt
     3061 tggcttgaat ggcggacatc gtatgccctt cgtccaaaat atcgtccagc acgacgacgt
     3121 gcctgccccg gatttgttcc gcatcgggca tacgcttcca gttgaacgcg ccgccctcca
     3181 gcttgtcgcc gtaacgggaa acgtgaacat aatcaaaatc taagggaaaa cgcaacagcg
     3241 gcagcaactg ccccgtaaac accaccgcgc cgcccatcac gggcagcagc agcggatatt
     3301 tgccgcccaa atcgcgcgta atctcgtccg ccactttttg cagtgcggca cggcattggc
     3361 cttggtcgaa caaaagatcg gcgttttcaa gcatcgcctg tgtttcaagg cgtttggttt
     3421 ctaaatcggt catatgtcgg aatcggtcgg taaaaggaaa attataaacc aaagtatcgg
     3481 atgccgtctg aactgtcctg ctcagcggtc ggtacgcacg cgcacaaacg tggcgaattt
     3541 cggcgtgcct ttctgcgtaa agccacggta gcggtaggta atcagtgtgc cgattttggg
     3601 cgggttgtct cggtctttat ctttgaagcc gctgccaatg cggaattcgc cgtaccggtt
     3661 tttgcagccg accgcgccca accgtccggc gtttcgccct ttgccctcat agtgccgcgt
     3721 taccgtgcat tcgtcgtcgt attggctttt cagcttcaat aattggctgc tcctgccgcc
     3781 gctgtaacgg gattcgggct gacgcagcat cacgccttcg ccgccctgcg cttcgatttg
     3841 ttttaaaaag tccatcgcgt gctgccggtc gcgcactttg atttgtggga tgatggtaat
     3901 cggcgcgttc ggatgcgttt tcagccactg cgttgcgact gccaaacgtt ggtagagatt
     3961 gccctgcgcc ttgggtacat cgaaaacgtg caggcggata ccgcgccagt ctgaagaagc
     4021 agaacgcacg gtagcggaaa tctgctcgaa ctgaccgcgt ccgctataca attcgccgtc
     4081 caaaggataa ggcggaaact gcgcggtaaa gcctttgggc ggtgtaaata catatccttg
     4141 ccggctgact aaatgtttac cgtcccaata cgcgcgcacg ccgtcgagtt tctcgctcat
     4201 cgcccagcct gcaatgtcct gccctttgta ttcctgcgcc agcatcaaat ccgccgcgcc
     4261 tgctgatgca gggatgaaaa ccgccgtaaa aatcggtatg atgccgccga ttgtcttctt
     4321 aatcatctga ttcccccaat atcaaaacgg gcggcaaacc gccataaaac aaacggcaaa
     4381 cccgatgccg tctgaaaaac cgtttaggaa cacgccgatg accctacgtt acgaaatctt
     4441 ccccgttacc cccttccgcc aaaactgcac cctgatttgg gacgacgaaa gcggcgaagc
     4501 cgtcctgacc gatgtcggcg gcgacgtgcc gttcctgctg caagcgttgg caaaccgcaa
     4561 acttacgctc acggcaatct ggctgacgca cggccatctc gatcacgcgg gcggcgtggt
     4621 cgaaatgttg aaaacgcata aagtccctgt cctcgggccg catccggacg atgaattcct
     4681 gctccaatcg ctgccgcaaa ccaccgcgca atacggattt cccgtctcgc ccgcctttgc
     4741 gccgaaccgt tggctcgaag aaggcgaaac gctcacggtc ggacgctatg cctttcaagt
     4801 gctgcatatt ccgggccata cgccgggaca tatcgtcttt tattgtgccg aggcggaatt
     4861 gctgattgcg ggcgacgtgc tgttttacga aaccataggc agaaccgatt ttccgcgcgg
     4921 caaccacgcc gacttaatca ataatatccg caacaaatta ttcacccttc ccgaaaccgt
     4981 gcaagttgtc gccggacacg ggcgtatgac ttccatcgga cacgaaaagc ggcacaatcc
     5041 gtttttctaa ccgccttccc tacggtcttc agacggcatc atctgcactg atgccgtctg
     5101 aaacacaaaa ggctcagaca accgccgcct tgccggtgta cctcgccaga caaggctttg
     5161 gtaagtactt caaacaaacc caaaatcaga accagtacag ttacgccgcg ctttcggcat
     5221 tcccgccccg gctgaaacaa tatttttccg cacaagtcag actgcttcat cttctgccgc
     5281 gtattccaaa gattccgaca acgccgttgt ttcattggaa cgctcgacca aatcccgttg
     5341 aagttgtttg cctgccttca cgcccaacag acgcagtttc tcggcgcgtc cgaccagatt
     5401 cccgcgccct tcggcaagtt gcttgaatgc cgtctgaaaa ctgctttgcg cctgatcgat
     5461 gcctttgccg acgctttcga gcgtctgtac gaagccgaca aacttgtcgt acagcttgcc
     5521 gccttcgtcc gcaatcgcca gtgcgttctg attttgctgt tcgttgcgcc aaatattcgc
     5581 caccgtcctc aaagtcgcca gcagcgtact ggggccgacc agcataatcc gtttgtcgaa
     5641 acactcttgg aacaatcccg cgtcatgctg caacgccagc aggtaggccg gttcgacagg
     5701 gataaacata aagacgaaat ccaatgtgtt cacaccttcc aaatcggtgt aatccttcag
     5761 cgacaagcct ttcatgtgtg cacggatgct ggcaacgtgt gccgccagtt cgcgtgccgc
     5821 cgtatccgca tccgccgcct gcgtgtagcg cacataagct gtcagcgaga ccttggagtc
     5881 aatcacaatc tgcttgttgt cgggcaggtt gaccaaaacg tcgggctgga ggcggcgcgt
     5941 gccgccgtct tcctcttttc ggacggatgc cgcctgaacc acatattcgc gccctttctg
     6001 gaggccggaa ttttccaaaa ccgtttccag aatcatctcg ccccaattac cctgaacctt
     6061 gttctgcgtg ccggtcagcg cgttggtcag ggcctttgcc tcgctgtgca gctgcgcatt
     6121 caatccttga agccgtttca attcgttttc caacgtcagc cgctcgcgcg attctttatc
     6181 ataggtttgc ttgaccaact cgccgaaacc gtggatgcgt tcgtttagcg ggttcaaaac
     6241 ctgatggagc tgctcgcggt tctgctcggt aaaacggcgg cttttttctt ccaaaatcgt
     6301 gttggcaaga ttttgaaact gatcgctcaa gctcttgcgc gcctcgccca gtaaggacag
     6361 cttctcttca gaagcaaggc gttcctgttc gatttgcgtt gccaaacgtt cgttttcaac
     6421 cgccaaaccc tgtgcctttt cctgcaactc ggtatgcgac tgcctcaacc gctccgcttc
     6481 cgcctctttt tcctgcaaat gggcaatctg tttttcggct gcggcaaaac ggttgccgac
     6541 atcggcaagg tcgttttgca cgtcgcggac agtttggcgg ctttcttcca aatcggtttc
     6601 gattctttgg cggatttggc gttccaaggc atattggtcg gcaaacgcct tccgttcctg
     6661 tccgagctgc gttgccaaac gttcgttttc aaccgccaaa ccctgtgcct tttcctgcaa
     6721 ctcgatatac gactgcttca gccgaaccga ttccgcctct ttttcctgca aatgggcaat
     6781 ctgcttttcg gctgcggaaa aacggttgcc caaagcataa ttttcgtcct gcaaatgtcg
     6841 gtatttcccg tccaaaacgg ccaattccga tgcaatttct gcgtgtgcct gttcgacaaa
     6901 atcacatctt gccgcctttt ccgccagttg cgcgttcaaa tcggcaaact cgccctgaaa
     6961 cctgcccttc atcagcaacc atgtaaacaa cacgcccgac accaacgccg ccaaaggcag
     7021 caaaacagtc atcagttcca tcaatcatcc taatattcaa acattttcac accggacaaa
     7081 accgccgctt attccgattc tacctgtttg ttcgacatag ctccaaaaaa tatagcggat
     7141 tggctttaaa cctgttcgac atcgccttac catgctgctt gcggtttcag accttttcct
     7201 aattcaatat caatctgcca caaaccctga ttaagttccc gatgtctgac atttttagaa
     7261 tgatgccgtc tgaaatgttg cagctatgtt cagacggcat acggatttag gcttttcaaa
     7321 cggcaggcaa aatgaaaaaa gggcaaaccc taaaggattt gcccttttgt tccaaacgct
     7381 tagtgtacgt ctttccaata ttcttttttc aggaaatacg ccaaaggcag cataaccgca
     7441 aataggaaaa tcatcacgac atagcctata cgtttgcgtt gcagttgtgc aggttcgccc
     7501 atgtacacaa ggtaattgac caaatcgcgt acatatgcgt cgtactcttt ttggatcact
     7561 ttgccgttag gcagacggcg gctgtgcaaa ccggtagatt cccaatacag cttaggcttc
     7621 atctcgccgt gttcgtcttt taccataacc ggctgacctt tggcatccaa ctcaacggct
     7681 tgaacgcctt gctgttccca caacgggtgg ggcataccga ctttatcgaa tacagtattg
     7741 ttccagccgc tcggacgggt cggatcttta tagaagccgc gcatataagc gtaaaggtag
     7801 tctgcacctt tggaacgcgc aatcaatgtc aaatcgggcg gagcagcacc aaaccatttt
     7861 gccgcatctt tcgggttcat cgccgaatgc atgacatcgc cgacattatc ggtggtaaac
     7921 atcaggtttt tcttgatttc ttcgtcagtc aaaccgatgt ctttcaaacg gttgaaacgc
     7981 ataccgcttg ccgagtggca ggacaggcaa tagttggtaa agatttgtgc gccgcgctgc
     8041 aggctgactt ggtcgcgcaa atcgatatcg actttctcat agtgtgcatg accgcccgaa
     8101 gcaaatgccg cacccatggg tactgccaac agcaaggcag caaaccaatt tttcatagct
     8161 tgtttcattt tgactgccct catcagatgt tggttgcaaa caggtaagca cccacggcgg
     8221 taatgccgac gtaaacaaag aacatgattt tttgtttggc ggtgctcatg gttacgcgtt
     8281 cgggaaccgg tttgttttta tccagcttgg tatagaacgg catacccagg aagaatgcga
     8341 aatagacgaa ggacaggatg cgcgcgacca aagtacgcgt atcggttgcc accatcgcgc
     8401 ccaaaatacc caaaccgata aaggaaatga tgaacaagac caatgcggtt ttgaaaatcg
     8461 gaccgcggta acggacggat ttcacctcgc ccctatccag ccaaggcagc agggcaatca
     8521 acacgaccgc cgcgcccata ccgattacac cccaaacctg cgttcccaag aacgagggaa
     8581 tcgcacgcaa aatggcgtag aacggtgtga aataccatac cggcgcaatg tgcgggggtg
     8641 ttttcagcgc atttgccgca tcgaagttcg gcgcttcgag gaagtagccg ccgccttccg
     8701 gtgcgaagaa caatacggca cagaagacaa tcaggaatac aaccacaccc aagatgtctt
     8761 taacggtata gtaaggatgg aatgggatac cgtcgcgcgg gataccgttt tcgtctttgt
     8821 ttttcttgat ttcaacgccg tcagggttgt tagaacccac ttcgtgcagg gcgatgatgt
     8881 gcgccacaac caagccgagc aataccagag gtaccgcgat aacgtgcagg gcaaagaaac
     8941 ggttcagggt aacgtcggaa acgttgaagt cgccgcgaat ccaagtggac aaatccggac
     9001 cgataacagg gatggcggag aacaggttaa taattacctg cgccccccaa aaggacatct
     9061 gaccccaagg cagcaggtag cccataaagg cttccgccat caatgccaag aaaatcagag
     9121 aaccgaaaat ccacaccaac tcacggggtt ttttgtacga accgtaaatc aaaccacgga
     9181 acatgtgcag ataaacaaca atgaagaaga aagatgcgcc ggtggaatgc atgtagcgga
     9241 taatccaacc gccggacacg tcgcgcatga tgtactcgac tgcagtaaag gcagcaggca
     9301 gatggtaggc gttcaggttg ccgtcgggtt tgtagttcat ggtcaggaaa atgccgctga
     9361 cgatttgaat cacgaggaca agcagggcca aagagccgaa gtagtaccaa aaattaaagt
     9421 ttttcggtgc gtagtattga gccaaatgct cattccacat tttagacagg gggaaacgag
     9481 cgtccatcca gcctaacaat gcttttgctt tgctattggt ttggtttgcc ataattatcg
     9541 ttccttattc ttagtcttcg cccaccaaga tagttgtgtc gctcaagtat ttatatggcg
     9601 ggacaaccag gttggtcggg gcaggaacac ctttatatac gcggccggcc aagtcgaatt
     9661 tcgaaccgtg gcaggggcag aagaagccgc ctttccagtc tgcacccaaa tcggcggggg
     9721 caatgtcggg acggaaggtg ggcgagcagc ccaaatgggt gcagataccg atggcgacaa
     9781 ggatgttcgg cttaatcgaa cgggtctcgt ttttagcata ctccggctgc tgttccgcat
     9841 cggaattggg atcggtaagt tcgccgttca ggcctttcag gtctttaagc tgctgatctg
     9901 tacggttgag cacccaaatc ggtttgcctt gccactcggc ggtcagcagc tgacccgctt
     9961 cgattttact gacatccacc tcgacggcag caccggcggc cttggctttt tccgaaggga
    10021 aaaaactggc cacaaacggc gttgccacac ccaatgctgc cactccgccc gcgccgcagg
    10081 tcgcgagtgt caggaaacgg cggcggccgt tgttgatttc ttgattatcc attattcagt
    10141 cgtcctaata ttttgggaat accgagccat taaacgttgc aattttaccc agtttgcagt
    10201 gatactcaaa gcattattta aaataaggta aagttttatg atatttctca agactcaagc
    10261 cggattgttt tcgtcaaaat ggcacacttc caacccgaaa acctctgccg ccgattctgc
    10321 cagcgcgcgt acgccgtaac gttccgtcgc gtgatgccct gccgaaatga aagccgtacc
    10381 cgtttcattg gcaaggtggt attgggcttc ggaaatttcc cccgtcaaat acagatcgac
    10441 accttcgtct attgccgtct gaaaaaaccc ctgcgccccg ccgctgcacc atgcaacccg
    10501 tcggatttcg cgttcgggtt tgccgatgac gacaggctta cgttgcaaaa ctgtttcaat
    10561 atgcgccgcc aatgcgccga gtgtcttggc ttgtttcagg ctgcccgagt tgagcaggtt
    10621 ttgttcgccg aaccgttttt ctgtcgcaaa acccaatctg tcggcgagtt gggcattgtt
    10681 gcccagtgtg ggatgtgcat ccaggggcag atggtagcct gccatattga tgtcgtgccg
    10741 taacagtgcg gcaatccgtt cttttttcca accagtaacg gtcggcaact cgtttttcca
    10801 gaacataccg tgatgtacca aaagcaaatc tgccttctgc tccacagcaa aatcaatcgc
    10861 tgccctgctt gccgttaccg acgtaacgat tttcccgata tattccctcc cttcaacctg
    10921 caaaccgtta ggggcgtaat ctttaaacaa cgctgtctgc aatgtttcat tacaccaagt
    10981 cagaaaatcc ctgcgcaata ccatcttttt tcctaatcgc tttaaacaag cgggcattct
    11041 aatcgcaaaa tgtctggaat tcacattttt ccgatttgca cccgcatatg aattatttta
    11101 atatgcgccg gttcaatatg ccgtctgaaa cctcatggat tccatcatcg aactgcgcca
    11161 cctcaagacc ctgctggcac ttgaagaaac cggcagcgtc tcccttgccg ccaaacgggt
    11221 tttccttacc caatctgcac tttcccacca aatccgtatg cttgaaaacc actacggcgc
    11281 accgttgttc gaacgaaaat ccacgccctt gcgctttacc ccggttggag aaaggctgtt
    11341 acgcctcgct cacgacctgt tgcctcaagt taccgatgca gaacgtgatt tggcacgcat
    11401 tatagaagga gaggcaggag aattgcggat tgccgtcgaa tgccatacct gtttcgactg
    11461 gctcatgccc gcaatgggcg aattccgccc gatatggccc caaatcgaat tggatatcgt
    11521 atcgggattc caagcggacc ctatcggact gctgctgcaa caccgtgccg accttgccat
    11581 tgtttccgaa gcggaaaaac aaaacggtat ttctttccaa ccgctgtttg cctacgaaat
    11641 ggtcggcatt tgcgcaccag accatccgct tgccgccaaa actgtctggg aagccgaaga
    11701 ctttatcggg gaaaccctga ttacttatcc cgttcccgac gagatgctgg atttgcccaa
    11761 aaaaatcctg attccgaaaa acatcaaccc gccgcgccga cacagcgagc tgaccatcgc
    11821 cattatccaa ctggttgcca gcagacgtgg cattgccgcc cttccctatt ggacagtcat
    11881 gccctacctt gaaaaaggct atgtcgttca ccggcagatt actgccgacg gattgcaaag
    11941 caaactgtat gccgccatcc gtaccgaaga tacggacaag agctatctga acaatttttg
    12001 ccaaatcata cgcgaacgcg gttttgcaga tttgcccgga ctgagcgaac tggaaccggt
    12061 ctgacccctt attcaaccat acccggcagt ttttctattt tttcatgtat agtggattaa
    12121 caaaaaccag tacagcgttg cctcgccttg ccatactatt tgtactgtct gcggcttcgt
    12181 cgccttgtcc tgatttttgt taatccacta tactgttttt gatttttgcc caatctgtaa
    12241 tctttagatt gccaatggga aaccgtctac tacaaataaa aaaaccctgc gataagcagg
    12301 gttttttgaa tttccaacat taacgtttgg agaattgttt tgcacggcgt gctttgcgca
    12361 gacccggttt tttacgttcg acttcgcggg catcgcgggt aacaaaaccg gcttgagaca
    12421 aggcgggttt caacgcggca tcgaagtcga tcagggcacg ggtaatgccg tggcggattg
    12481 cgccggactg gccggtttcg ccgccgccaa caacattgac tttgatgtcg aaagattcgg
    12541 cgttttcagt cagaaccaag ggttggcgaa caaccattcg gctggtttcg cgtgcgaaga
    12601 attcgtcaac gggacggccg tttacgatga tttgacctgt acctttaatc aggaatacac
    12661 gagccactga acttttgcgg cggcctgtgc cgtagtagta tttaccgttc atgtcgcgtc
    12721 cttatttcag ttccaaaact ttgggttgtt gcgcagcatg ggcgtgttcc gcacccgcat
    12781 acactttcag ttttttaatc atggcgtaac ccaaaggacc tttgggcagc atacctttta
    12841 cagcttgttc caaagcgcgg cccgggaatt gctcttgcat ttcgcggaaa gtgcgttcgt
    12901 agataccgcc tgggaaaccg gaatggcgga agtatttttt atcttcgaat ttggcaccgg
    12961 ttacacgcag tttgtccgca ttgataacaa tgatgtaatc gccggtatcg acgtgggggg
    13021 tgtattcagg tttgtgtttg ccacgcagac ggctggcgac ttcggccgca acgcgaccca
    13081 agactttgtc ttgggcatcg atgacgaacc attcgcgctt cacctcgtgg ggtttcgctg
    13141 aaaaggtttt catagtggaa atccaaatag atatagaaag ttgtaaattt taaagacagg
    13201 attcgatttt gtcaatcgca ttaccgcgtt acggaaggat tttccggatt tcggcagact
    13261 gcatactgct ttttcgggcg gggcggcggc caatgtgaaa aaccgcatcg ttgcgatgcg
    13321 gttttgaatg ggaatccccg cgagagccgt ttcggccgaa tccgcttgaa ccttgctgac
    13381 aaggcggctg cctcgggtag tttcgggtgc gtccgcaaaa ggacgctcgc gcccactact
    13441 gctcccggca accttaagcg aacttattgg ttcaaaggaa tatatgcctt cgcggacacc
    13501 gcagggaaaa aggggttatt cctgcgccaa gcgggatagt gctttttggc aggcgttgtc
    13561 catatcggct attttacgcg caaaatcgcc gattgccaaa tcgccgccgt tcagggaggt
    13621 tttcaacagg tcgtggacga cgttgagcgc ggccataatg acgatttttt cgctgtccgc
    13681 gacgcgtccg ccttcgcgga tggcttcggc tttgccgttg agcattccga ctgcctgcaa
    13741 cagtgtgtct ttttcttctg ccggcgtgtt gacggtcagc cgggcgtgca tgacttcgat
    13801 gtggacttgt tcgatgttca tcctttaatc cttattgctg cgtttcctgc cattggggga
    13861 ggcgcgctgc cagtgcgctg attttttccc tgctctgttc gagcaggctg cggtatcgtg
    13921 tattttcttc tgtcaggctg tcgattttgt tttgcaggtc ttctttgagt ttgccgactt
    13981 ggacgagcag ggcttcgctg agttcgtcga cggcggtttc gtgttcgagt ttttgccgct
    14041 cgtgcgcccg tttgagttcg gcgacggttt ctttgaggcg gcggttttcg ctgacgaggg
    14101 tttcgaattt ttgtaccagc gtataaacgc tgctttcgag tttttcgata ttttgtttca
    14161 taaccttacc tgtccgtatg ccgtctgaag gcttcagacg gcatctgtct gttgtttatt
    14221 caaaacgcgc gctgcgttcc atcagccttt cgacgacctg ttgcggggtc atttctttgc
    14281 ggatgagttg cagcagggtt tgggtaatcg gcatgtcgat ttggtactta caggcagtat
    14341 tgaagacttc ttctatcgtg ctgacccctt cggaaacgtg tccgatttcg accagcacct
    14401 gatgcagttc cttgccttct gccaaaccca agccgacgcg gcggttgcgt gagagtgcgc
    14461 cggtgcaggt caagatgagg tcgccgatgc ctgccagccc catcatggtt ttgggctgtg
    14521 cgcccattgc ggaggcaagg cgggtgattt cagctaatcc gcgcgtaacc agtgcggcac
    14581 gggcgttaag cccgtactct agaccgtcgg acaatccggt ggcaatcgcc ataacatttt
    14641 ttaccgcgcc gccgactgcc acgccgataa catcggtact gccgtaaagc ctcatgacgg
    14701 tcgtgttgag ctgcggtacg agttcttcaa tccactcttg gttttcggag gcgaggacga
    14761 cggcgcaggg cagttgtttg gcgagttcct gtgcaaaact cggaccggaa agtacgccga
    14821 tttttttatt gtcgggcaat acttctttca atacttgaaa ggtcagcagc cctgtatcct
    14881 gctcgaatcc tttgcaggcg gcgaggacgg ggaggtgtcc cgcgccgtac tgtttgagca
    14941 gctctgcgct gcttctcaat ccggcaacgg aggttacgat aaggacaagt ccgctgtctt
    15001 tgagcgcgtc tgccaaatcc gcacacactt ccaaggtttc gggaaaggaa aagccgggca
    15061 gtccgcgttt gttttcacgc gcttcctgca tttggcggac ttggtctgcg ttgcgcgtcc
    15121 acagggatac gcggttgccg tgttgggaaa agtgcagggc gagcgccgta ccccacgaac
    15181 ctgcgccgat aacggtaatt ttcattggtc gtctttcaac atatcactgc cgttcacttt
    15241 aaaacaatcg gtgtttctct gcaagtgcgg tcagggaaat gccgtctgaa aggcgttcag
    15301 acggcatttt gccccgatgc ggcactatca gcctgtattg cgcaaacctt gcgccacgcc
    15361 gttgatggtc aggtgcacca tcagaagggc gtgcggattg tcgggttctt tacgcaggcg
    15421 tttgagcatg gcgacttgca aaccgttgag cgcgttcagg tatggaatcc tcaaagcgag
    15481 cgaacgggcg aggctgcggt tgtcgcgcaa aagctcttcg gtttgcagca ggtcgagcag
    15541 tgctttgcgg ctgcggcggt attcttcctt aatcatcccg aagatgattt ttgccttatc
    15601 gggcgattcg ctcaagccgg catagttttc cgcgagggtg atgtcggttt tcgccatcac
    15661 ttgctccata ttggagagca tggcttggaa gaacggattg ctttgggcat gttcgcgcag
    15721 ggcggtcagt gtgtcgggat tgccttcgca caaggtttcc accgcgctgc cgaaaccgta
    15781 ccaagcaggc agcatgaggc ggttctgcat ccaggaaaat acccacggaa tcgcgcgcaa
    15841 gtcttgaatc cgcgctaagg tcttgcggct ggcaggacgg ctgccgaggt tgagggtggc
    15901 gatttcctga atcgggctgg tttgcaggaa gtagtcgatg aagtcgggat gggtaatcag
    15961 ttcgcggtag tatttgaacg atacgtccga caatgcctgc atcagtttgg catcagggtc
    16021 ttttttatcc ggcaggatgc tggcttccaa agtcgcggca accaaggttt ccaagttgcg
    16081 ttgggcattg ccggggtcgg cgtatttggc ggtaatgact tcgccttgtt cggtaatgcg
    16141 gatttgtccc gccacgctgc ccgccggttg ggcgagaatg gcttggtaag acgggccgcc
    16201 gccgcgtccg acgctgccgc cgcgaccgtg gaacaggcgc atgcggacat cgtatttttt
    16261 gaagagttcg accaagccca attccgcctg atacagacac catgagctgg taacatagcc
    16321 gccgtctttg ttggagtcgg agtagccgag cataatttct tggatgttgc cgcggctttc
    16381 gagcagggca tcgtaccaat cgaggcggaa catggtttcc atgaccggac aggcgttttc
    16441 gagtgcttcg atggtttcaa acagcggcac gatattgatg cggctgtgcg gtttgccgtt
    16501 ttccaccgcc aacaggccgc tttctttcag cagcaatgcc aaggcgagca ggtcgctggg
    16561 ttgttcgcag ttggaaataa tgctttgtgt tacggcatct tcgccaaatt cgtctttgat
    16621 tttgcgcgct tcgttgaaaa ttgccagttc gtggcgggta tggtcgctgt atgtgatgaa
    16681 cgggctgtac agcggacgtt gatggctcaa ttctcgcaac aggacggctt gtttttgttc
    16741 ttcgttcagg ctgttgtagt cttccaagcc tgcgtgttgg aaaagctcgg caaccacatc
    16801 ggcgtgtttg cctgcgtgtt ggcgcaggtc gagcggcatc atgtggaagc cgaacacgga
    16861 cacggaacgg atgaggtctg ccaaacggcc ttcggcaagc aggcggctgc cgttgtcgat
    16921 aagggaacgt tgcaattttt tcaaatcatc gagaaattct tgtgccgaag catacggctc
    16981 gagaaagccg aatttgcagc ccatgcccaa accgagcgcg cgcgctttgc ccatagcgcg
    17041 cgccatgatg taagcaatgg cgcggcggta gggttcttcc gtgcgggcaa gttcttcgtc
    17101 aggcgagagg gctgccagtg ccattacgtc gtcgttgact ttgacgcggc ggatggagag
    17161 cggcagttcg cggtaaagtt tgtcgagttc gccacggtaa aaacggaaca cggcatcggc
    17221 gtggcggcgg aaggcaaaac gcaaggtttc ggcagaaacg aacggattgc cgtcgcggtc
    17281 gccaccgatc cagccgccga ttttgaggat attcggaacg cagacatcgg gatagaccat
    17341 ctgaaagtcg tgttccatat tgcggtagag cttgggcagg gcttcgaaaa agctcatcgg
    17401 gaagatggac acgccgttgt tgatttcgtc gttgacgctg agtttgtggc ggcgcgtttc
    17461 gctggtctgc cacaagccca gcaggatagt gtcgatttcg cggcgcagcc gtgccagcgc
    17521 gtcggcattg gtgcagcgtt cgcgttgcgg caacagtgcg cggatgcggc ggttgaagct
    17581 taagacggtt tggcgttgca cttcggtcgg gtgcgcggtc aaaacggcgg taacggacgt
    17641 attgtccaac tgccgctgca ccgatttgcc gtcggctttc cccgctttga gcctgcggac
    17701 ggtttccgtc aggctgcctt ccgcgccgcc gcgtccggct tcttcgtgga tttggcggcg
    17761 gcgttcgtgg tgcacgtctt cggcgatatt caaaatctgg gcgaacaggc cgcaggccaa
    17821 ggttaaatcg tgggtttgtt gttcgtccaa ttgcggcaat actttttcaa tcaatgccgc
    17881 gctgtcgtcg gaagtggaca agagtttgac cgtttcgaca accaatggcg aggcttcttc
    17941 gtgcaggagg ttgaacaggg attgtttcag aaattccgcg tccgccgcca aagccgcgtc
    18001 cttcggattg ttcagaatat gcagttgcat gatttttctc tcattgccgt aaatactgta
    18061 aatgtacctc aaatgccgca tccgtgccaa accgttcaca ctttaaccgc ccgtgtcccg
    18121 aaatgccgtc tgaagttgaa cgccgcccga cggcagcgtt acaatcgccc acaactgttt
    18181 tttccgaaca tcatcatgac cacgaccgaa cacgacaacg acgatgcatt cctgctgcgg
    18241 tacagccgcc acatcctctt ggacgaaatt ggcatcgaag ggcagcagaa actttccgcc
    18301 gcgcatattt tggtcgtcgg ctgcggcggt ttgggtgccg ccgccctgcc ctatctcgcc
    18361 gcttccggca tcggcacgct gaccatagcc gattccgaca cggtcgagct gcacaacctg
    18421 caacgccaag tcgcatttga cgagggcgat gtcggcaagc ccaaagccga agccttggca
    18481 gaccgcctga aacgcatcaa ccataacgtc gatgtccgca ccgtcaacga aaaactcgac
    18541 ggctgccgcc tgaccggttt ggttcaaacc gccgacatcg ttttagactg ctgcgacaac
    18601 tacgccacgc gccaagccgt caaccgtgtc tgcgtacaaa cgaaaacacc gctggtttca
    18661 ggagcagcgg tgcgctttga agggcaactt gccgtgtacc gtcccgactt gcccgactcg
    18721 ccgtgttacg cctgcctgtt tgacggcgga tcggcttcag acggcatctg ttccctcttc
    18781 ggcgtattct cgccgctggt cggcatcatc ggctgcacgc aggcggcgga ggctctgaaa
    18841 atcctgctag acgtgggcga accgtcgcac ggcaggctgg cggtttaccg tgccttggaa
    18901 gggggctggc aatatttcga cctgccgcgc aaccccgaat gcccgatttg cggcacggaa
    18961 cggtaaaacc ctgccgccgt ttcagacggc ataaagacgg atgcggagga acggttttaa
    19021 aaatcggcgg tgttttgaca tagtgtcgat aagcatactt atcttcaata tactcaacag
    19081 gataattgtt tgcctaagca aaaaataatc gccttttccc tgacgggcgg gcgaaatcca
    19141 cggattgcaa aaacacaacc tgaaaattta catttcttt
//
LOCUS       DAXHKG010000028        18845 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.028, whole genome shotgun sequence.
ACCESSION   DAXHKG010000028 DAXHKG010000000
VERSION     DAXHKG010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18845
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.028"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            52..1005
                     /locus_tag="ACFMWP_000738"
     CDS             52..1005
                     /locus_tag="ACFMWP_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HFC5891375.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVSKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1109..1432)
                     /locus_tag="ACFMWP_000739"
     CDS             complement(1109..1432)
                     /locus_tag="ACFMWP_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891376.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1605..2966)
                     /locus_tag="ACFMWP_000740"
     CDS             complement(1605..2966)
                     /locus_tag="ACFMWP_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HFC5891377.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASQEQRTEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            complement(3327..5027)
                     /gene="recJ"
                     /locus_tag="ACFMWP_000741"
     CDS             complement(3327..5027)
                     /gene="recJ"
                     /locus_tag="ACFMWP_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HFC5891378.1"
                     /translation="MSVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLAALLPYQTLTNCEAAAGRLADAVGRKEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPADTVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLTALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAV
                     "
     gene            complement(5079..5813)
                     /locus_tag="ACFMWP_000742"
     CDS             complement(5079..5813)
                     /locus_tag="ACFMWP_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891379.1"
                     /translation="MLFRKTTAAVLAATLMLNGCTLMLWGMNNPVSETITRKHVDKDQ
                     IRAFGVVAEDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTDGLCLRYDTDRPDDIAKLKQLEFEAVELDKQTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPLFDTGCG
                     GRGTGFACGGSGCGRGCRPQMNSNAV"
     gene            complement(5860..6366)
                     /gene="yjgA"
                     /locus_tag="ACFMWP_000743"
     CDS             complement(5860..6366)
                     /gene="yjgA"
                     /locus_tag="ACFMWP_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HFC5891380.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPHADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            6521..7852
                     /gene="pmbA"
                     /locus_tag="ACFMWP_000744"
     CDS             6521..7852
                     /gene="pmbA"
                     /locus_tag="ACFMWP_000744"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HFC5891381.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGFAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8149..8352)
                     /locus_tag="ACFMWP_000745"
     CDS             complement(8149..8352)
                     /locus_tag="ACFMWP_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HFC5891382.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8595..8897
                     /gene="clpS"
                     /locus_tag="ACFMWP_000746"
     CDS             8595..8897
                     /gene="clpS"
                     /locus_tag="ACFMWP_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HFC5891383.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8899..11196
                     /gene="clpA"
                     /locus_tag="ACFMWP_000747"
     CDS             8899..11196
                     /gene="clpA"
                     /locus_tag="ACFMWP_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HFC5891384.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDEDDGNYSSDG
                     MDDDNENRAKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPL
                     LVGEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKS
                     VLKQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEY
                     RTIFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELS
                     ARYINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVSRIPEKTVSH
                     DDKQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGK
                     TEAAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHC
                     VLLLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSL
                     GFTAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLD
                     KKVEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRI
                     DWDAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(11260..12264)
                     /gene="rfaD"
                     /locus_tag="ACFMWP_000748"
     CDS             complement(11260..12264)
                     /gene="rfaD"
                     /locus_tag="ACFMWP_000748"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HFC5891385.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LNWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYKEEFFDVKSGVDRYVKWMLENLA
                     "
     gene            complement(12305..13423)
                     /locus_tag="ACFMWP_000749"
     CDS             complement(12305..13423)
                     /locus_tag="ACFMWP_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC5891386.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPLIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEVLLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKNKMRIYPEGREKYLEYHRKFVFQDNIDDFL"
     gene            complement(13425..14660)
                     /locus_tag="ACFMWP_000750"
     CDS             complement(13425..14660)
                     /locus_tag="ACFMWP_000750"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC5891387.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFSRVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(14697..15668)
                     /gene="hldA"
                     /locus_tag="ACFMWP_000751"
     CDS             complement(14697..15668)
                     /gene="hldA"
                     /locus_tag="ACFMWP_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HFC5891388.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(15723..16463)
                     /gene="pyrF"
                     /locus_tag="ACFMWP_000752"
     CDS             complement(15723..16463)
                     /gene="pyrF"
                     /locus_tag="ACFMWP_000752"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HFC5891389.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(16989..17636)
                     /gene="adk"
                     /locus_tag="ACFMWP_000753"
     CDS             complement(16989..17636)
                     /gene="adk"
                     /locus_tag="ACFMWP_000753"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HFC5891390.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            17851..18690
                     /gene="htpX"
                     /locus_tag="ACFMWP_000754"
     CDS             17851..18690
                     /gene="htpX"
                     /locus_tag="ACFMWP_000754"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HFC5891391.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
BASE COUNT         4602 a         5114 c         4522 g         4607 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgc
      361 accaagcgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatcttgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggc tttctgcccg gagacctgac ccaaaaagtc
      601 gacccctacc tccgtccgct ttatgacgcg ctttacgacc tgatgggctt cgaccgcgtc
      661 agcaaactga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 aacgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctctg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa tcgggcagag aaaaacggat acggaaacca agctccgtat
     1081 ccgtttcttt atccgtccaa ccgatacatc aatcgaattt tctgcatcgg attgcctcat
     1141 cttcgcaaaa cattgccgaa gtttcgcggt tgcacgcctg acgcactttc tgccgcgcca
     1201 cgccttcatt ccgatcgctt gcctcaaacg tcttctgaaa aggcgtaacg ctgcatacat
     1261 acatggtgga atttgaaccg aaaaggtcga ttttgacggt attgctgccg ctttccaata
     1321 cggcgacacg gtgttccaac tgcgccagac gtgcttccaa atcgccgatt ctgtcggcaa
     1381 atgcaggcat ggcggcacac gcggtcaaaa tgcccaaaat acattttttc atcaattttt
     1441 ccttgtttct tgaaccctac ccacccggac atcctttttc cgagaggcag ggtcagactt
     1501 tatttacggg gatgaatccc cttacaaatc aggataatac atagaacggc actttatgct
     1561 tcatcccatg tgttgaaact tcattgctcc ttgtctgttg acccttattc ccaatccgtt
     1621 ccctcaacct tcggcttggg tttgcgcctg cgacggcggc gttttttcgc ctgtccttcg
     1681 tttttttcgt gccgggcagc agcctcgttt ttggtcattt ccgtccgttg ttcctgcgat
     1741 gccgtctgaa acgccgtcca ccactcggca agggcgcggt ccgcattgcc ggtttcggcg
     1801 cgcaagagca ggaaatcata ggcggcacgg aaacgcgcct gtgcaaacag tttatgcgga
     1861 cgtgcgcctt tgcggttctc aaactgcggc tgaaacatcc aaatttcgcg catcgtggcg
     1921 gaaaagcgtt gcggcacgcc ccaaccgcgt tcgacggttt cacgcatcgt attgattgca
     1981 tcggacaggg cgggcgcagg tttcaaaccc tgttgcagat tgcttttcca atggcgttcc
     2041 aactcgggcc acatcagagc cgccagtaca aaaccgaccg aaaccgattt gtcagcacgc
     2101 agccgctcat cggtattttt cagggcaagc accgtcattt ttccggcgat gccgtctgaa
     2161 acgcgcaagg cattgagcag cggatggatg tcgtccggta tgtcaaatcc gttcaaacgt
     2221 ttcagacact cgcgcgcgtg ccctgaaaac agcagtttca tgatttcgtc aaacagcctc
     2281 gctaccggtt cgtgcttcag acggcatatc gattcggcaa tcggtgcggt ggtttcttcc
     2341 gacagctcaa agcccaattt gcccgacagg cggatggcgc gcaaaatcct gacagggtct
     2401 tcctgatagc gttcggcggc atcgccaatc ataaccagcc tgcgggcggc aacatcggca
     2461 atcccgttgt ggaaatccaa aatctcttct ttttcaggat cgtaatacaa ggcattgcag
     2521 gtaaaatcgc gccgcatcgc atcttcttcg atgctgccgt aggtgttgtc tttcatgatt
     2581 ctgccgtgcg cgttctgatg aaccttcgca ccgccgcgaa acgtcgttac ttcgataatc
     2641 tccgcaccgt tcatcacatg gacgatttga aaacgcctgc cgatgatgcg gctgcggcgg
     2701 aagagtttgt gcacctgttc gggcgtggca tcggttgcga catcgaaatc tttgggttcg
     2761 atgccgagca gcagatccct gaccgcgccg ccgaccacat aagcctgaaa ccccgcccct
     2821 ttcagacggc gtatgacgtt ttcggcggca aagctcaaca tttcggcacg gatgttgtgt
     2881 ctttcggcag gaatgaccgt tttactttcc gcttttttac tgctccgacc ggaaggcagc
     2941 atcttattca accatttttt cagcataaat attctaaccc gaagagcggc atctccacgg
     3001 gcaaccgtgt tcagacggca tcaggcggta cgattccgca agatgccgta accataaaca
     3061 aaaggcgtag aaactacgcc gtccgaatca cgccgccctc gcggcggcgg caacgcgcca
     3121 ttataacaga ttgcccttta aaaaaatcag accctgcttt tgtggcggag tctgaaattt
     3181 gatgcacctt atatattgcg tccctaagaa gggatgatta acaaaaatta acgcccttta
     3241 ctttcttttc cgattgggaa cattcccgtc gtacaaacag gcaaatgaag gaacagaaat
     3301 cacattcaaa cggcgttccg ccgcctctac accgcttccc agtaatcgat atacagctgc
     3361 aattcgagat tgttgcgcca ttcgttggca acggggcggt aaaccgtgcg gatgtattcg
     3421 gggatgtctt cgctgcaacg ccaaaacatc gcttcaaatt cgcagccgtc tttttgcagc
     3481 cagacttttt tgtgtttgcc ctccgcgccc aaaggttgct ggcggacgac gtggaactcg
     3541 tcggtaaagc tcggcggcgc gaagccctgc ccccaaacgt gacgggcaag gttttgcgcc
     3601 tgttccaacg tgatgtcgca ggcgggcagg ctgccgtcgg tgatgaaggt ttgcgacaaa
     3661 tcgtcttcgc acaccatttc gcgcacggct tcttcaaagg tcgtctgaaa cgcgggaatg
     3721 ttgtgttcaa gtatgctcaa acccgccgcc atcgcgtgtc cgccgaattt taaaatcaaa
     3781 tcgggatggc gtttggacac caagtccaaa gcatcgcgca ggtgcaggtt gggaatggaa
     3841 cgccccgaac cgcgcacttc gccgttgtcg gcaggcgcaa acacgatggt cggacgataa
     3901 aaacggtctt tgaggcggct ggcgacgata ccgaccacgc cttgatggaa gtcgtcgcga
     3961 tacgccacca aagtcgtctg acctgaaggc agggtttcag gaaaggcgtt cagcgcgtct
     4021 tgcagcatag actgctcgat ttcgcgacgc tcgatattga ggttgtttaa ctgagccgcc
     4081 agttcctgag cttcggaatc atctcgcgcc aacaggcagg cgatgccgac cgacatatcg
     4141 tccagccgtc cggcggcatt gatgcgcggg cccaacgcaa aacccatatc aaacggctgc
     4201 gccttgcgcc agtcgcgccg cgccacttca aacaaggcgc ggatgccggg gcgcattttg
     4261 cccgaacgca tccgtttcaa accttgcgac acgaggatgc ggttgttgtg gtcgagaggg
     4321 acgacatcgg caaccgtgcc gagtgcgacc aaatccaaaa gatcgcccag attcggctct
     4381 ttcaggccgt ctgaaaaata attgcggcgg cgcagttcgg cacgcaacgc cgtcaacaca
     4441 taaaaaatca cgcccacgcc cgccaagctt ttgctttgga aaccgcagcc tttttggttc
     4501 ggattgacga tgatgcagtc gggcacggta tcggcaggca gatggtggtc ggttacaatc
     4561 acatccaaac ccagagcctg cgccctcgcc acgcctgcga tgctggcgat accgttatcc
     4621 accgtaatca gcaaatccac gccctgcgcg gcagcgattt cggcaagttc gggcgttaag
     4681 ccgtagccgt gttcaaagcg gttgggcaca aggaaatcca cttttgcccc catcgccgcc
     4741 aaaccgtcca aaccgacggc acacgccgtc gcgccgtcgg catcgtagtc ggcgacaatc
     4801 aggatttttt ccttgcgccc aaccgcatcc gccaaacgtc cggcggcggc ttcgcagttt
     4861 gtcagcgttt gatacggcaa aagcgcagca agcttgtcgt ccaattcggc aggactttgc
     4921 acaccgcgcg aagcacaaag ccgggcgatt aaaggatcgg caccggcggt gagcaaatga
     4981 ttaaaaacgt cggtattgat ggatcgggtt tggattttga ctgacataac gtggggtttt
     5041 actgtgcgtg tgtgcttaaa atgccgtctg aaagcttttc agacggcatt gctgttcatt
     5101 tgcgggcggc atccacgacc gcacccagag ccgccgcagg caaagccagt accgcgcccg
     5161 ccgcatccag tatcaaaaag ggggggcgta tataagatat ttgcaaacag cttggatttg
     5221 tcggtatgtt tttcagtaac cgtgtaataa atatcggcag gcacactttg ctcaaaatga
     5281 taatcggcgt tcagtttttg cggcgtggcg tagtatttgc ctttggcaga gacgcagcgc
     5341 gtgtaaatag tctgtttgtc gagttcgacc gcttcaaact caagctgttt cagcttggcg
     5401 atgtcgtcag gcctgtcggt atcgtagcgc aggcaaaggc cgtcggtact gaaattctgg
     5461 ctgccgggcg attcgagttt gaccggcagg gcttggtggc gggcatagct cggggtatcc
     5521 tcaactattt ggaagggctt gtccagcccg gccttcaaaa tgcccgtcag cttcgccgaa
     5581 tcttcaggat tgacgacgaa ccagtatttt ccgcccatca tcaccaggct gcccttttcc
     5641 aattgggcat tgtcttcggc aaccacaccg aaggcgcgga tttggtcttt gtcaacgtgt
     5701 ttgcgggtga ttgtttcgct gaccgggttg ttcattcccc acaacatcaa cgtacagccg
     5761 ttcagcatca aggttgccgc caaaacggcg gcggtcgttt tacggaacaa cattttatcc
     5821 tccaatctaa ataacggcgg atgtcgtctg aaaatatgcc taaatttccg cgtccccgtt
     5881 ttccatcacg gttttcaact cttgaaacag ggcgcggaaa ttttttggtg gtttgttttg
     5941 ctcctgctct tttttggtat tgcggatgag tgtcctcagc ttgcccgcgt ccgcatgcgg
     6001 aaaatccgac ataaactgcg tcaacgcgcc gtcgtctgcc agcagctcca tccgcgtccg
     6061 ctccacacgt tgcaaaaagg cgttgtgcgc cgcatcgtcg ccgcgcagct tggcaagaaa
     6121 tgcctcgatg ggcgcgggat cggtatcgcg catcagtctg ccgataaatt gcgcctgccg
     6181 cttgagcgcg ccgttggatg tgattttttt ataggtaacg acggcttcgt acaaatcttc
     6241 gtccaagccg atttttttca acgtgtcgct tgagagcttg gtcagctcca tacccaaatc
     6301 ctgcaaaccg ttcatctgct ttttcatttg ggttttgctg acccattcgt cttcttgttc
     6361 aaacatcttc attctcaaat tttatccgac gggcgcattt taacagaatg attccgcgtt
     6421 cagacggcat tttgcaccgt ccgccctgca aacggcacgc ttttgcccct gccgcccgaa
     6481 acggttaaaa tgccgcaacg ctccaccaag aaagatttct atgctgttca accacaccgc
     6541 ttccgaactt ctcgacctct gccgccgcac gctcgacttg gcaaaagcag cgggcgcgac
     6601 cgccgccgaa gccgatttca gcgaatccat cggacaaagc gtcagcgtgc ggctgggcga
     6661 aatcgaacaa atcgagttcc agcaggacaa gtcgctggac attaccgttt acgtcggcaa
     6721 acgcaaaggc cgcgctggca ccgccgattt ctccgaacaa gccctgcgcg acaccgtccg
     6781 cgccgccgcc gacatcgccc gccacaccgc cgaagacggt tgcgccggac ttgccgaccc
     6841 cgagttgatg gcgcaacaca tcggcgaccc cgacctttac cacgaatggg atttggatac
     6901 ggaagccgcc gtcggctttg caaaacaatg cgaacaagcc gccctgaacg aggatgagcg
     6961 catcgaaaac tccgaaggcg cggcggtgca aaccggccat taccaatacg tttacggcaa
     7021 cacccacggt tttgccgcac accggcaagg cacgcaccac agcatttcct gcagcgtcgt
     7081 tgccgccgac gaaaacggga tgcagcgcga ctactggtac gattccgcct gccgccatcc
     7141 ggatatggac agccccgaaa ccatcggtca aaccgccgcc cgccgcactt tgcgccgact
     7201 cggcagccgc agcatcccga caggcagcta ccccgtcctc ttcgatacca ccgtttcggg
     7261 cggccttatc ggacacctcg tcggcgcact ctccggcggc gcgctctacc gccaaagcag
     7321 tttcctgatc gacagcatcg gcaaaaaagt cctgcccgat ttcctcaacc tgcgcgaaga
     7381 accgcacatc ccccgctctt tccgcagcag ctattttgat gcggaaggcg ttgccaccgc
     7441 accgcgcttc gtgattcaaa acggcattgt cgaaggctat ttcctcagca gttacagcgc
     7501 gcgcaaactc ggtatgcaga ccacgggcaa cgccggcggc gcgcacaacc tgtatttgaa
     7561 ccatacgcac gaaacgcaat ccgacctgct gaaagaaatg gggacgggat tattggttac
     7621 cgaactgatg ggacagggcg cgaacaccat taccggtgac tactcgcgcg gcgcggcggg
     7681 tttttgggtg gaaaacggcg tgattgccta ccccgtccac gagattaccg tagccggacg
     7741 cttgcaggat atgtaccgcg acattgtcgg cgtggcggat gacgctttgc ggcgttcgtc
     7801 caacaaaatc ggctcgattc tgattgcggg gatgacggtt gccggaagct gaacgccctg
     7861 ccgatgccgt ctgaagacga aggcagcacg ttttgccccg tgcctgcccg tttgccgttt
     7921 tatgccgcac cgccttttgc cgacaacatt gcacattttt tcatcagcac tgattttccc
     7981 ttatccgtca aaatactaag ccacttgtcc acaacagggt acacacaagt tcaggataag
     8041 gcgtgcgggg attggggttt ttccgccgcc ggcaaaacgg cagacaaaaa cggcgggaca
     8101 ttgcctgtcc cgccgttttc aaatatacat ttgaccgtac atcaggaatt aagcagcctg
     8161 aatgttggcg gcctgtttgc ctttagggcc ggtggttacg tcgaaagaga cgcgttggcc
     8221 ttctttcagg gttttgaaac cttccatatt gattgctgag aagtgagcga acaaatcttc
     8281 gccgccttca tcaggcgtga tgaaaccaaa acctttagcg tcgttaaacc attttacgat
     8341 accggttgcc attagaaact tcctatactc aaaaattaac aaaatcagca aaacaaggca
     8401 tacggcaaac cgagccgtct ggcgttcctt ccagcttgat atactcggcg gatgcccaat
     8461 cctgcttaac cgtcttttta catttgttaa gacaaaacgt caagctatgt tttcaaaaaa
     8521 gtgggaaaat aggcaaaagt accgaaaata caacaaaaat gccgtctgaa cgcggctttc
     8581 aaatgggaca cactatgacc gcgcaacacc aatccgacac gctcttgcac cgtctgaaca
     8641 ccctgccgcc gaaacgttac ggcgttttcc tattgaacga cgattacacc acgatggaat
     8701 ttgtcgtcga aatcctgacc gaaatcttta tgctcggaca agaacaggcg gtagcggtaa
     8761 tgctcttggt tcatcacgaa ggcaaaggcc tgtgcggcac ttacacgcgc gatattgccc
     8821 aaaccaaaca acaacaagtc atgcagcggg caaaagccga agggcatccg ctgcaatgta
     8881 ttgtcgagga gatttaatat gcttgcaccc gaattggaac agattttgca gcagctttac
     8941 cgcgaggcgc gtaaggctca ttatgaattt atcagcctcg agcatctgct tttggtactc
     9001 atcgaagaag atgcctccgt gccgaacgtc ttaaaactat gcggcgcgga tttgaaagtg
     9061 gtgtccgaac agctcgccgc cagcgttgcc gaaaacaccc ccctgattcc cgaacacctt
     9121 ttagacacgg tcgaaacacg gcccacgctc ggcttccaac gcgtgatgca acgggcgatg
     9181 gtgcataccc agtctgccgg aaaagccgca gtcgaaccgt tggacgtttt ggtcgcgctg
     9241 atgagcgaaa ccgacagcca caccgtctat ttcctcaagc tgcaatcggt tacgcgtttt
     9301 gaagttttgc gctgtattgc ccacggctct cccgatgaag atgaagatga agacgatggc
     9361 aactattctt cagacggcat ggacgacgat aatgaaaacc gcgccaaacc gggcaaaaac
     9421 cctttatcgg cgtacaccgt caacctcaac gccgaagtca aagccggccg tatcgaccct
     9481 ttgattggtc gcaaacacga aatggaacgg ctggtgcaaa tcctatgccg ccgccgcaaa
     9541 aacaatccgc ttttggtcgg cgaagcgggc gtgggcaaaa ccgcgctggc ggaaggtttg
     9601 gcacatcaaa tcgtcaacgg cggcattcca gacgcgctca aagatgccga agtgtacgcg
     9661 ctggatatgg gctcgctgtt ggcgggcacg aaataccgcg gcgactttga agcgcgggtc
     9721 aaatccgtct tgaaacagct cgaaaaaatc ccgcacgcca ttttgtttat cgacgaaatc
     9781 cacaccatca tcggcgcggg cagcaccagc ggcggcacca tggacgcgtc caacctgctc
     9841 aaacccgcgc tggcaaaagg ttcgctgcgc tgcatcggcg cgaccaccta cgacgaatac
     9901 cgcaccattt tcgacaaaga ccatgcctta agccgccgct tccaaaaaat cgacgtggtc
     9961 gaacccaccg tttccgaaac cgttcaaatc ctgcgcggct tgaaaccgat gtttgaagcc
    10021 ttccaccaag tccgctacac tcaaggcgca ctcgaagccg ccgccgaact ctccgcacgc
    10081 tacatcaacg agcgtttcct gcccgacaaa gccatcgacg taatggatga agcaggcgcg
    10141 gcgcaacgga ttctgcccaa atccaaacag aaaaaagtca tcggcaaagc acaaatcgaa
    10201 accgtcatcg ccaaagtttc gcggattccc gaaaaaaccg tgtcgcacga cgacaaacaa
    10261 gtgctgcaat tcctcggtcg cgatttgaaa aacatggttt acggtcaaga aaacgccatc
    10321 gacgcgctgg ttgccgccgt caaaatgtcg cgttccggcc ttgccctgcc cgacaaaccg
    10381 ataggcagct tcctcttctc cggcccgacc ggcgtgggca aaaccgaagc cgccaaacag
    10441 cttgcctact cgctgggcgt accgctgcaa cgctttgata tgtccgaata catggaacgc
    10501 catgccgtat cgcgcctcat cggcgcgcca ccgggctacg tcggctttga acaaggcggc
    10561 cttttgaccg aagccgtcaa caaacagccg cattgcgtat tgctcttgga cgaaatcgaa
    10621 aaagcccacc ccgacatttt caacgtcctc ctgcaagtca tggacgcagg caaactgacc
    10681 gacaacaacg gcaagagtgc cgatttccgc aacgtcatcc tgattatgac caccaacgca
    10741 ggcgcggaaa gcctcagccg ccccagcctc ggctttaccg ccaagcgcga acgcggcgac
    10801 gaaatgcagg caatcaacaa gctcttcacg cccgagttcc gcaaccgctt ggacgcgatt
    10861 atcccgtttg cacccttgtc cgaacccatc atcgtcaaag tcgtggacaa attcctgctc
    10921 cagctcgaac accagctcct cgacaaaaaa gtcgaagccg aattcacgtc ggcattgcac
    10981 aaatatctgg cggaaaaagg tttcgacccg caaatgggcg cgcgcccgat gcaccgcctg
    11041 attcaggaaa aaatccgcaa accgctcgcc gacgaactcc tgttcggcaa actatccgac
    11101 ggcggcttcg tgcggataga ctgggatgcg gcaaaagaag aagccgtgtt gaagtttaag
    11161 aaaagcaagg tcaaaataaa aaccgcctcc gcgtaaaatc aaaaatgccg tctgaaattt
    11221 cagacggcat tttctttcaa acaaaattac caatcgtgtt taagccaaat tttccagcat
    11281 ccatttgacg tagcggtcga cgcctgattt gacatcgaaa aattcttcct tatatccggc
    11341 ttcgcgcaat ttggtgatgt cggcttgggt gaagctctgg tatttgcctt tgagtgcgtc
    11401 ggggaagggg atgtagcgga taagttcttc ttccaccagc tctttcaagc tcatttcagg
    11461 cttgccttcg gcggcgcggc aggcgttgac ggtggcggcg gcgagttcgt taaactgttg
    11521 gctgcggccg gtaccgaggt tgtagatgcc ggaaagttcg ggatggtcga agaagtagag
    11581 gttgactttg gcaacgtctt cgacgctgac aaagtcgcgg gtttgttcgc cgttgccgta
    11641 accgtcattg ctgccgaaca ggttgacgta accgtgttcg cggtattggt ggaaatggtg
    11701 gaaggtgacg gatgccatgc ggcctttgtg ttgttcgtgt tgtccgtaaa cgttgaagta
    11761 gcggaagccg acgacttggg cggtgagacc ttctttcatg cggcggcgca atacttggtc
    11821 gaacaggaat ttggagtagc cgtacacatt aagcggtttt tcgagttcgc gctcttcgcg
    11881 gaagatttcg cctttgccgt aaaccgccgc actggaggca taaaggaagg gaatgcgttc
    11941 gtcctgacac cagttcaaca aatccagcgt gtactggtag ttgttttcca tcatatacaa
    12001 accgtcgtgg ttcatcgtat cggaacacgc gccttgatgg aaaacggctt cgatgttttg
    12061 ataaggtaaa atgtgttccc tcacttggcg gatgaattcg tgtttgtcga gataatgggc
    12121 gatttcgcac tcggcaaggt ttttgaattt ttcgcctttg ctcaaattat cgacggcgac
    12181 gatgtcggta ataccgcgtt gattaagtgc tttgacgatg ttgctgccga taaagccggc
    12241 cgcgcctgtt acgatgatgg tcatattcgg tttcctttgt tttgagtaaa attaataaac
    12301 ttagttacaa gaaatcatcg atattgtcct gaaacacaaa tttgcgatga tattccaaat
    12361 atttttctct tccttcggga tatattctca tcttattttt tgcatttgga ttgatattaa
    12421 gtttttccca tgtgtaacgg cttagtcgag taccgcaaat caaacgacca tcatccaaga
    12481 aagtaatata accttgatcg aacaaccaat cataagtcgg cgttaaagct aacccattta
    12541 aataatctaa tgcctctttc tcatttttct cagtaataca aaccatataa ggtttaatat
    12601 gactagccct taacaaaacc tcatctgtaa ttaatgtaaa tggacattgc ggcatatgat
    12661 ttataacatc cttgcgatat ttctgctgcc cttttctact tttctgttta atgatttctt
    12721 gctctacgaa ttgattaaat tctgaagccg gtatttctaa tttttctctt gataagagtt
    12781 gcgggtgcac gatagagcga aattgataat ccaaaaatat tcggaaataa aataatggtt
    12841 ctgaatcttc tatatctttg acaggcaata gtttaagaat tgataaataa ctaattttgg
    12901 gcaatacaat cttacgccaa attgaccata tatcatcctc cgaacggata taacccctac
    12961 ggtaaccttt agaattttcc aaatggtctg atacatcatg gattgaaaag aaaatatttt
    13021 ctgtaggcag attattaata cttaaaacgt aatcatcata aaaccttgaa atatcatgat
    13081 gatatttctg ttcttgtttg tgatattcaa cttttgcatc aaccaaataa cgctgtaaat
    13141 ttttcttatt aaaaaaacaa tttttctgaa tgagaggata ttctaccctc cttccatttt
    13201 ttgtctcagt aatcccccaa ttttcatact caaaaaatgt acttagtttt cgaccactat
    13261 catcaatata actacctaca tatttgcgtg cttccccatt accaccaaaa acagataact
    13321 tgttattcct gtgaataaaa ctatcttccg cacgtaaatt ttgaatacta tcgacaataa
    13381 aatactctat gttttcaata gtaattcttt gaaaatccgg cattttactc tccataaagc
    13441 gtaatatcca tttgttttaa tatagcgatt aatacatcaa caacaatact gtttcccgct
    13501 tggcgataca tttgagtatc actaactaaa attttaaaat catctctaaa acccattagc
    13561 cgcaaacatt ccctaggtgt taatttacga atacgtccac gattatgagt aacataatta
    13621 tcaaccccgg cacgatgcat tttatgcata gtttgcaata atgggcgagc tacaggcaaa
    13681 tcagtttccg tactggtttt aaaatttttt gttcctcctg ccaaaacata atttttgatt
    13741 ttttcagaaa gataatattt ttcctcaacg ttatttacat caaaaataaa gtcatcaaat
    13801 tcagattcgc gggctgcctg aaaaataaaa tcaccatgcc aattaaattg ttgatttgct
    13861 ttttggcata aggcaatttc tccattaatc tgtgtataac gtttttgtct atttttagaa
    13921 ctggtaacaa atttcacacc cttttcacgt aaaaaatatt tgctatcagt atagtcctcc
    13981 aaaaaatctt gcatagtatg ttctaattca atcttttcag gaaactgaaa accatttata
    14041 ggaggggtat gaaagccaac aacaaaaata cgctcacgat gttgaggaat cccataatcc
    14101 ttactattca ttatttggaa atataagtca taaccaagtg aataaaaaac actttttaca
    14161 actttccaag tttttccatt atcatgattg agcaagccct ttacattttc ataaataaat
    14221 atctttggtt ggacttcatc cacaacgcga gaaaattcat agaataatgt tcctcgtgta
    14281 tcttctaatc ctgcacgttt gccaaccatg gaaaatgctt ggcaaggact gcctccaact
    14341 aaaatatcaa cttgatttct aaactttctc gcatcaaatt gagtaatgtc gttatgccaa
    14401 aaatcttcat ttaatttata gtttccaaga taactttttt taacgtatgg atcaatatct
    14461 cctgcaaaaa caatggtatg gtttaaattt aatcggtgga atgcctgttc aaccgcacca
    14521 atcccgctga atacggttgc taatctaata tgtgaatcag gtttaagaaa agttttagat
    14581 ttccaacctt gttgactggg aaagagcaaa gttttttgta atcgagtatc gtgtgtctgt
    14641 gccattgtcg aaatagtcat acttatatcg ttctgtttat cttatcaata tgaaaactac
    14701 attgttgatt gccctgacaa tgccttgatc aattcggcaa acgagcaaac cgccgtaccg
    14761 agtttcgcca cgacaacccc ggccgcagta ttggcaaggt acatggcttc gggcatggtg
    14821 cagcctgccg ccaaacccaa gcccattccg gcaatgacgg tgtcacccgc accggatacg
    14881 tcgtaaactt cttgggcgcg ggtgggctgg taaatcggtt cgccttcgct gaacaaggtc
    14941 atgccttctt cgcttcgggt cagtaaaacg gcggtcaggt cgaggtggcg gcgcaggttt
    15001 tgcgcttttt cggtcagctc gctttcgttt ttccaactgc cgaccacttc tttcaattcg
    15061 gcgcggttag gcgtaatcag agttgcaccg acatattttt cgtaatcgtc gcctttgggg
    15121 tcgattaaga cggttttgcc ggcgtgtttc gcccaatcga tcatatcgga gatatgcgac
    15181 aggccgcctt tgccgtagtc tgaaaaaatg attgcgtcgt attcgggcaa gatttcgcgg
    15241 tatttctgct tgatttgttc caacacttcg cagttgggat gttcttcaaa atcaagacgg
    15301 ataagctgct ggttgcgggc gacgacgcgc agtttgacgg tggtggcgat ttgtttgtcg
    15361 cgcatcagat aggaggcgac gccgtcctgc accatcagcg catcgagcgc gtcggcggct
    15421 tcgtcgttgc cggttacgga caacagccct gccctgccgc ccaacgaagc gatgttgcgc
    15481 gcgacatttg ccgctccgcc cgcgcgttgg tcgattcgtc cgattttcgc caccggcacg
    15541 ggggcttcgg gcgaaatacg ggacacatcg ccgaaccaat agcggtcgag catcacgtcg
    15601 ccgacaacca ggactttggc ttgcgcgaaa cgggatttga gggtttcttg ttggaacttg
    15661 gcggacatat tgcctccgtt gtattttttc agacggcctc agcctgtaag gccgtctgaa
    15721 aatcagtttg cttcaaggtt tgccacgcgg ttcacttcgc gcaatacggc taccggatcg
    15781 gcagcttggg ttacaggacg acccattacc aaataagtcg aaccggcagc caaggcttcg
    15841 gccggtgtca tgatgcggcg ctggtcatca ttattgccgg caacgtccaa gcggatgccg
    15901 ggcgtgacca agacaaaatc ctgtcccaat tcgcggcgca gcggcgcggc ttcttgggcg
    15961 gaacagacca cgccgtccaa gcccgaactt tgcgccagtt ttgccaagcg gatgacttgt
    16021 tcttcagggg cggtgttcaa accgatttcc gccaaatcgc tttgttccat gctggtcaac
    16081 acggttacgc cgattaagag cggcttcgtg ccgtatccgg caacggcttc tgctgcggct
    16141 tccatcatac ggcggccgcc cgatgcgtgc atatcgacca tccaaacgcc catatcggca
    16201 gcgactttgc aggcttgcgc gacggtgtgg ggaatatcgt ggtatttcaa atcgaggaaa
    16261 agtttgaaac cttgattgat taagctttct gccaaattgc gtcccgtcgc ggtaaacagc
    16321 tctttgccga ttttgatttg acacaatgtc gggtcaaggt tgcggacgaa tccgagcgtg
    16381 tctttttcgt tggaaaaatc aagggcgacg ataacggggg tgcgttgttg cggagtttgg
    16441 aagtcggaga ttaaaggatt catggtgttt tcgtttcggg ttttcagacg acctttatcg
    16501 tctttttcgc agtatagtgg attaacttta aaccggtacg gcgttgtctc gccttagttc
    16561 aaagagaacg cttctctaag gtgctgaagc acaaagtgaa tcggttccgt actatctgta
    16621 ctgcctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactataac aacgtaaatt
    16681 caaaccgtag gtcgggcatt gatgtccgac ctacgcgaac tcaagcctcc gacaaactgt
    16741 ttcggataaa tttgaaccgg tacatcagcc gtcattcccg cgcaggcggg aatccattga
    16801 taaaactcag ttcatcagat ttaaacagcg attgcccaaa ttcagaaatg gattcccgcc
    16861 tgcgcgggaa tgacgccaaa tgattatttt tcggttgcaa cacgctgttt atcaaaaaca
    16921 ggtcgtctga aaacctgatt ttctgttttc agagtgcgaa gcctgcccgt gggtacgacc
    16981 ttttcgattt atttgcccaa tgcgcccaat acttcggctt tcacggcttc taccggctga
    17041 gtgccgtcaa ctttgatgta tttaggcgcg tgttcgcctt ccagtttgct gtaaaaatcg
    17101 accaaaactt cggtttgctc gtggtaaacg gcaaggcgtt ttttcacggt ttcttctttg
    17161 tcgtcgtcgc gctgaatcaa atcttcgccg gttacgtcgt ctttgccttc aactttgggc
    17221 gggttgtagg taacgtggta agtacggccg gaagccaaat gcacgcggcg gccgctcata
    17281 cggtcgacaa tcacgctgtc aggcacgtcg atttcaacga ctgcatccaa atccacgcct
    17341 gcttcaacca tcgcttcggc ttgtgccaat gtgcgcggga aaccgtcgaa caggaaaccg
    17401 tttttgcagt cgtcttgcgc gatgcgttct ttgaccatgc cgataatgat gtcgtcgcgc
    17461 accaagccgc cttcgtcaat gatttttttc gcttccaaac ccaagggcgt gccagcctta
    17521 atcgcggcgc ggagcatgtc gccggtagag atttgcggaa tgccgaacgc ggcggtgatg
    17581 aattgcgcct gagtgccttt gcccgcgccc ggcgcgccta aaagtaatgc tttcatgaag
    17641 tgatcctttg aaatgtgttt attggaatca aacagatggt ttacgattct acacggcttg
    17701 gcacaatagt tcaaaaacca actgcacaaa ctgccatttg caagcaaatg ttttgcatac
    17761 ctttgccgag tctgatattc acaagccggc aactttttgg gacaatcccc aaaatttcaa
    17821 aacatcacac cctaccaaaa aggaacatcc gtgaaacgaa tttttctgtt tttggctacc
    17881 aatatcgctg ttttggtcgt aatcaacatt gttttggcgg ttttgggcat caacagccgg
    17941 ggcggcacgg gcagcctgtt ggcgtattcc gccgtcgtcg gcttcactgg ttcgattatt
    18001 tcgctgctga tgtccaaatt catcgccaaa caatcggtcg gcgcggaagt tatcgacacg
    18061 ccgcgcaccg aagaagaagc ctggcttttg aacactgtcg aagcccaagc gcggcaatgg
    18121 aacctgaaaa cgcccgaagt cgccatctac cactcccccg aacccaatgc ctttgccacg
    18181 ggcgcatcga gaaacagctc cctgatcgcc gtcagcaccg gtttgctcga ccatatgacg
    18241 cgcgacgaag tggaagccgt attggcgcac gaaatggcac acgtcggcaa cggcgatatg
    18301 gttacgctga cgctgattca aggcgtggtc aataccttcg tcgtgttcct gtcgcgcatt
    18361 attgccaacc tgattgcccg aaacaacgac ggcagccagt cccagggaac ttatttcctg
    18421 gtcagcatgg tattccaaat cctattcggc ttccttgcca gcttaattgt catgtggttc
    18481 agccgacaac gcgaataccg cgccgacgcg ggcgcggcaa aactggtcgg cgcaccgaaa
    18541 atgatttccg ccctgcaaag gcttaaaggc aacccggtcg atttgcccga agaaatgaac
    18601 gcaatgggca tcgccggaga tacgcgcgac tccctgctca gcacccaccc ttcgctggac
    18661 aaccgaatcg cccgcctcaa atcgctctga gccgatttga aacaacaaaa aaaccgtacg
    18721 cgcaagcagt acggtttttt gtatatgctg tctgaaaaca tcaggtttcc ataccaacac
    18781 caaccgtatc catttccgca ccggatacgc cgcattgata taccctgata aaccgtgtcc
    18841 ggaca
//
LOCUS       DAXHKG010000029        18651 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.029, whole genome shotgun sequence.
ACCESSION   DAXHKG010000029 DAXHKG010000000
VERSION     DAXHKG010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.029"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            54..1064
                     /gene="waaF"
                     /locus_tag="ACFMWP_000755"
     CDS             54..1064
                     /gene="waaF"
                     /locus_tag="ACFMWP_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HFC5891392.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAIIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLDIGKPVLAFCPGAEFGPAKRWPTRYFAELGKHYSAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            1119..1565
                     /gene="smpB"
                     /locus_tag="ACFMWP_000756"
     CDS             1119..1565
                     /gene="smpB"
                     /locus_tag="ACFMWP_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HFC5891393.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            1996..3981
                     /locus_tag="ACFMWP_000757"
     CDS             1996..3981
                     /locus_tag="ACFMWP_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC5891394.1"
                     /translation="MISLFFSILYTSPLLAVDYVYDNSKLTNEQIDRLKKLRDKSSEY
                     WKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKKISFYDKEYTEDYLVGFARG
                     FGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFENSGPRLIKSDIFALAPQIKN
                     SHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFHYIEVTDNSHVIGQTISLDE
                     FRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFRFAYDLKDKVS
                     ETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIYT
                     LSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLR
                     VIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSVGLMSGQAEQRSTFRNP
                     DTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQYQRFRHRINTEDATERFTSK
                     GITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSENAHVNLLGSR
                     QLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEIDGERRVINNKTAIESQL
                     GVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(4162..5529)
                     /locus_tag="ACFMWP_000758"
     CDS             complement(4162..5529)
                     /locus_tag="ACFMWP_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFC5891395.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(5639..5905)
                     /locus_tag="ACFMWP_000759"
     CDS             complement(5639..5905)
                     /locus_tag="ACFMWP_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891396.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAAATEAPAA
                     EAPTAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAPAAEAAK"
     gene            6378..6860
                     /locus_tag="ACFMWP_000760"
     CDS             6378..6860
                     /locus_tag="ACFMWP_000760"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC5891397.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            6947..7759
                     /gene="hpnC"
                     /locus_tag="ACFMWP_000761"
     CDS             6947..7759
                     /gene="hpnC"
                     /locus_tag="ACFMWP_000761"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HFC5891398.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLQRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(7830..8300)
                     /locus_tag="ACFMWP_000762"
     CDS             complement(7830..8300)
                     /locus_tag="ACFMWP_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HFC5891399.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHKIA"
     gene            8391..10232
                     /locus_tag="ACFMWP_000763"
     CDS             8391..10232
                     /locus_tag="ACFMWP_000763"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HFC5891400.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTNPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEVGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANKP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            complement(10748..11944)
                     /locus_tag="ACFMWP_000764"
     CDS             complement(10748..11944)
                     /locus_tag="ACFMWP_000764"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC5891401.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPNHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKDLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            12295..12594
                     /locus_tag="ACFMWP_000765"
     CDS             12295..12594
                     /locus_tag="ACFMWP_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891402.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            12594..12779
                     /gene="ccoS"
                     /locus_tag="ACFMWP_000766"
     CDS             12594..12779
                     /gene="ccoS"
                     /locus_tag="ACFMWP_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HFC5891403.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            12769..14079
                     /locus_tag="ACFMWP_000767"
     CDS             12769..14079
                     /locus_tag="ACFMWP_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC5891404.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            14237..14971
                     /gene="dnaQ"
                     /locus_tag="ACFMWP_000768"
     CDS             14237..14971
                     /gene="dnaQ"
                     /locus_tag="ACFMWP_000768"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HFC5891405.1"
                     /translation="MIQRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAAHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            14968..15657
                     /gene="ispD"
                     /locus_tag="ACFMWP_000769"
     CDS             14968..15657
                     /gene="ispD"
                     /locus_tag="ACFMWP_000769"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HFC5891406.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIHPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            15689..16171
                     /gene="ispF"
                     /locus_tag="ACFMWP_000770"
     CDS             15689..16171
                     /gene="ispF"
                     /locus_tag="ACFMWP_000770"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HFC5891407.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            16248..16919
                     /gene="rpiA"
                     /locus_tag="ACFMWP_000771"
     CDS             16248..16919
                     /gene="rpiA"
                     /locus_tag="ACFMWP_000771"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HFC5891408.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLMMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            16988..17659
                     /locus_tag="ACFMWP_000772"
     CDS             16988..17659
                     /locus_tag="ACFMWP_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HFC5891409.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            17675..17854
                     /locus_tag="ACFMWP_000773"
     CDS             17675..17854
                     /locus_tag="ACFMWP_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891410.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            17838..18584
                     /locus_tag="ACFMWP_000774"
     CDS             17838..18584
                     /locus_tag="ACFMWP_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC5891411.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
BASE COUNT         4443 a         4245 c         5301 g         4662 t
ORIGIN      
        1 ttttccaacg gtttcgcggt aaaattctgc ctgtctgatt tcggtttctt gttatgtcca
       61 tcaaaatcct gattatttct cccagttgga taggcgactg cgtgatgacc cagcccttgt
      121 tccgccgttt gaaggaactt caccccggtt gcacgattga tgtgttcgca ccgaagtggt
      181 cgatggcggt gtttgagcgt atgccggaag tgaatgagat tcttgaaaat ccgttcggac
      241 acggtgcgtt ggagttgaaa cgccgctggc gggtcggtag ggatttgggg cggcgcggat
      301 acgatcaggt tatcgtgttg cccggttctt tgaaatcggc aatcatcgcg ctggcgacag
      361 gtatcggtaa aaggacgggt tatgtcggtg aaagccgtta ttttctgttg aacgatatac
      421 gcaggctgga taaggaacgt ctgcctttga tggtggacag atatacggct ctcgcgcatc
      481 cgagccagga ggattttgac gggcattcgg gattccccga gttttccatt gatgaacggc
      541 ggcgggaaat ttctgtcgaa acctttggct tggatattgg aaagcctgtt ctggcttttt
      601 gtccgggtgc ggaattcggg ccggcaaagc gttggccgac aaggtatttt gccgagttgg
      661 gcaaacatta ttcggcggcg ggttggcagg tttggctgtt cggttcgcaa aaagatgatg
      721 aaattgccga ggaaatcaac tgcctttcag acggtatgtg tgtgaattta tgcggaaaga
      781 ccgatttgtc gcaggcaatg gatttgctgt cgttggcgga cacggtcgtg tgcaacgaca
      841 gcgggctgat gcacttggcg gcggcattgg gcaggaaggt ggtggcggtt tacggttctt
      901 ccagcccgac gcatacgccg cctttgagcg acagggcgaa aatcgtcagc ctgcacttgg
      961 aatgttcgcc ctgttttaag cgggaatgtc cgctggggca taccgactgc ctcaacaggc
     1021 tgtatcccga gaagattgtg caggcggttg aagaggcggt atgatgggtt ctgttttcgg
     1081 gtttatgccg tctgacggcg gatattgata ggatgtttat ggctattgcg aacaataaaa
     1141 aagcatttca cgattttttc attgaagacc ggattgaagc cggtttggtc ttggaaggct
     1201 gggaagtcaa agcaatccgc gccgcgcgcg tacagcttaa agagagttat atctattgga
     1261 aaaaagacgc gttttatctg gtcggctgcc atattacggc tttgcccaca gcctcgacac
     1321 acattaaacc agatgccgta cgtccgcgca agctcttgtt gaaccagtcg gaaatcaaca
     1381 aattaatcgg caaaaccgaa cgtgccggct acaccatcgt gccgctggat ttgcattttt
     1441 cgcgcggaaa aatcaagatg gaaatcggtt tggcaaaagg taagaaacag cacgacaaac
     1501 gtcagagtat gaaagaggcg gattggaaac gcgagaaaca gcggttgatt aagcatacgc
     1561 gctgattgtg gaaacagtgc ttcagagggt atgggcaagg ctgccgcctg atgtgtaaac
     1621 gttctacacc taaaccagca tccgctttaa tcagcacagc atgatgcccc aaaccttcgt
     1681 caaaggtttg agcaatttga tgataaattg gcattagcca agggtaaagt gcggtcattt
     1741 ttcctgaaat ttttgtaaat aacgagggca attatacaca ttttcaaact ggcttgacaa
     1801 aatagcaaaa agcaaacgtt tacctttaat aaataagaaa taaatagaga aaaatgtgag
     1861 ctaaatgaca ttttttgttc agttttatgc taaaatccac gccccattta tttttacttg
     1921 acaaaggaaa atttattatg aaactcgaag caagcaagca agcaagcaag caagcagaag
     1981 tttaaaaaat catttattat aagtctattt ttttctattc tttatacctc tccgcttttg
     2041 gctgttgatt acgtttacga caattctaaa ttaacaaatg agcaaattga tcgcttaaaa
     2101 aaacttagag ataaaagcag cgaatactgg aaacaagaaa cttatcttct aaaaccgacg
     2161 aatggtagct ctcagaactc tctcaaagtt cccgcactat actctaaaac acaccaattc
     2221 aaaaacatca acaactcaaa aaagatttct ttttatgaca aggaatacac tgaagattac
     2281 cttgttggct tcgcccgagg tttcggggtt gaaaaaagaa atggggaaga agaaaaaaca
     2341 ctccagcaat attttaagga ctgtgtaaat actgggaatt ccaataatga taagtgtgaa
     2401 caaccatcct tcgaaaactc tggcccaaga ttaataaaga gcgatatttt cgccttagct
     2461 ccacaaataa aaaatagcca tatcaacagc gaaattttat ctgtaggtaa ttatatcgaa
     2521 tggcttcgcc caacacttaa taagcttcct agttggcaag agcatctcta ttctggttta
     2581 gatccattcc actatattga ggttacagac aactcacacg ttatcggaca aacaattagt
     2641 ttggatgaat tccgcttaga aaattctctc tgggaacccc gttgggattc tgatgttggg
     2701 gaattaaaaa caacgaatgc agacatccgt tttaatacta aaagtgaaag tttactcgta
     2761 aaagaagatt atgctggcgg agctcgtttt cgttttgctt acgatctaaa agataaagtc
     2821 tctgaaacac cagttttaac ttttgaaaaa aatataactg gcacttccga catcatcttc
     2881 gaaaatccaa tagacgattt aaaaagtctc gacgggcatc aaattatcaa agtaaatggc
     2941 acagcagata aacacgcatt ccgtctttct ggcaaacacc aaaagggaat ttatacgctt
     3001 tctttacaac aacgcccaga aggctttttt accaaagtgc aagaacgcga tgatatttcg
     3061 atttatgcac aacaggctca agccgccaat accttattcg ccttgcgttt gaacgacaaa
     3121 aacagcgata tttttgaccg cactttacca cgcaaaggct tgtggttgcg tgtgattgac
     3181 ggacattcca accaatgggt gcaaggcaaa acagcacctg tagaaggcta tcgtaaaggt
     3241 gtgcaactcg gtggcgaagt attcacatgg caaaacgaaa gtaatcaact ttccgttggc
     3301 ttaatgagcg gacaagcaga acaacgcagc actttccgca atccagatac agacaatctt
     3361 acaacgggaa atgtgaaagg ctttggggcg ggcatttatg ccacttggca tcagcttcag
     3421 gacaaacaga caggtgcgta tgcggatagc tgggtacaat atcaacgctt ccgccaccgc
     3481 attaacactg aagatgctac agaacgtttt acttcaaaag gtattaccgc ctcaattgaa
     3541 gcgggttaca atgctttatt ggcagaacac ttcactaaaa agggcaacag ccttcgtgtt
     3601 tacctacaac cacaggcaca attgacttat ttgggggtaa acggaaaatt cagcgatagc
     3661 gaaaatgccc acgtgaattt acttggctcc cgccaattac aaactcgggt tggcgttcaa
     3721 gctaaagctc aattttcact ctataaaaat atcgctattg aacctttcgc cgctgtgaac
     3781 gcgctttacc acaacaaacc tttcggtgtg gaaatagacg gagagcgtcg agtgataaac
     3841 aataagacgg caattgagag ccaattaggt gtagcagtga aaatcaaatc tcacttaact
     3901 ttacaagcct cattcaaccg ccaaacaagc aaatatcatc aggctaaaca aggtgcgttg
     3961 aatttgcagt ggacgtttta agttaagttg taacaaaata aaatcggcag ggaaattcac
     4021 tgccgatttt tttattttaa aaatgcggtc atttttcgtg tcatttccac caatttttta
     4081 ccgcactcac gagctcgcgc taaaccgaca atcggatcta ttgtcccttt ctttgttgtg
     4141 tatgcaaatc agaaatgccg gttacggaag cagtttgccc ggattcataa tgttatatgg
     4201 atcaaggtgt tgtttgatgc ttttcatcag ggcgatttcg gcaggcgtgc gtactttgtc
     4261 cagccactgt tttttgatga tacctatgcc gtgttcggcg gcaatcgtgc cgttgcaggc
     4321 aagaacgttg cgataaactg cgtcgttgat gtcgttttcg taacgataga cttcattgct
     4381 gaggatttcg ggcaggaaag tattgtagtg caggctgccg tcgccaagat gtccgaagca
     4441 gacgatttgt atgcctttaa aattctgttc caaatctttg gcgcaccggc ggacaaagtc
     4501 ggcaacgcgt ccgataggaa cggcaatatc gtgtttgatg ctggtgccca gtttgcgttg
     4561 ggaggcggag atgttttcgc gcaatgccca catatggata cgttcttgtt cgctttgtgc
     4621 caatacgctg tcggtaaatc cttttttata aagaaattcg acgagccgat catcaagatt
     4681 gctgtcgggt aatgagtcgg tcaactcaag taaaatatgc cattctgaat gtgtcggcag
     4741 ggggaatttg ctgaattcgg aagacaactc ggcggcaaaa cggccgatca gctcaaaact
     4801 gcataggcgt tcggcaaagt gagcttgggt ttcggtcagc aggcggacgg cggattcgat
     4861 gtcgggtatg ccgacccatg ccgttgcctt gtccgaggga cgggcaaaaa gcttgagtgt
     4921 ggcggcagtg atgatgccca gtgtgccttc gctgccgata aacagatggc gcaggtcgta
     4981 gccggtggtg tttttatgca ggggatggag atgggaaacc agctcgccgt tggggaggac
     5041 gacttccaaa ccgataatca ggtcgcgcat cgtgccgtaa cgcaatacgt tcaaacctcc
     5101 ggcattgcag gcgatgttgc cgccgatttg acaggagcct tcgctggcga gactgagtgg
     5161 gaacagcctg tttgaggctt cggctgcctg ttggacggtt tggagtacgg aacctgcttc
     5221 gacggttatg cagttgtctg acaaattgat gctgcggatg cggttgagtt tggaaaggtt
     5281 cagcaatacg ccgttttccg atactgccgc gccgcacaaa ccggtattgc cgccttgcgg
     5341 cgtaaccgga atacggtgtt cgtaacaaaa acgcataatg gtttgcacgc tttcaacgct
     5401 gcgcggctgc aaaatgatgt ctggtgcaga cgtaaagcgg ttgcgctggt cttttaaaag
     5461 cgtcggagaa agttcggcaa tttcatctgc cggcaggagt cgggaaaatt cggtatgaag
     5521 gtcaggcatg tttgtcggaa gggtagggag aagattgagg aagggaatct gatgccgtct
     5581 gaaaaatcaa aaaagcagga tactgaacgt atcctgcttt tttgcaagcg gaaaatgctt
     5641 attttgcagc ttcggcagca ggagcttcgg cagcaggagc ttcagcggca ggtgcttcgg
     5701 tagcggcagc ttcagcagcg ggagcttcgg cggcaggtgc ttcagtagcg gcagcttcag
     5761 cagtgggagc ttcggcggca ggtgcttcag tagcggcagc ttcggcggca ggtgcttcgg
     5821 tagcgggagc ttcagcggct ttttcaccgc cgcaggctgc caggaccaaa gacaacaaag
     5881 cagcggcaaa cagggatttt ttcattttag taacctttag aaccaattta aattattgaa
     5941 acaaataggt ctttatcgac catactacaa accgggttgg aaattcatcg ctgaatttgc
     6001 gtaattatgc actatggaat aagggattgc aatgtcgtac agatgggaaa aaggtttgaa
     6061 tgaaaagttt tctggcgggc ggattgataa atcctgtaaa acggttttgc tgttaaaaat
     6121 tcgataggga taaatattat agagattaat ataatttcag tatcttgtat gatttattaa
     6181 ggcggattgg gaaagtcggc agacaggtcg gaatggtttt aagaatgttg taaaaaagtt
     6241 acaccgcaat aaaataacaa aaatttacat tgaaatatgt gctgtacagt ttatgaacag
     6301 gttaacggta atcggccggc gcggcggttg tgttagaatg cgcctgtaat caatctgctg
     6361 ttcctgaaag gacaaatatg gctatcgtga aaaattccgt ggtttcgctg cattatgaga
     6421 tgtatgatgc caacaatcag cttttggaca aaaccgaaga accgattgcg tatctgcacg
     6481 gcggttacga cggcattttc cctttggtgg aagaggcgtt gcacggtaag gatgccggcg
     6541 atacggtcga tgtggcgctg tcgcccgacg atgcgttcgg cgagcaggat ccggagttgg
     6601 tccgtattga agatgcgggc gtgttccctg ttgaagtcga agtcggcatg atgtttgaag
     6661 ccgacgatcc tgaaaccggc gatgttgtcg tctatcgtgt aaccgatgtt gccgacggca
     6721 aggcggtggt ggacggcaac catcctttgg caggcatgaa aatccgcttt aaggctacgg
     6781 ttgaaagcgt gcgcgatgca tccgatgagg aaatcgcaca cggtcatgtc cacggcccgc
     6841 acggtcatca ccaccactga ttgccggcag cttggaggta tctgatgccg tctgaaaagg
     6901 gtttgttccg tttcagacgg cattttgttt gatggatgga gaaggtatgt cggttgggca
     6961 ttatgagaat tttcccgtcg gttcgctgat tttgccgcgc aggttgagga agccggttca
     7021 cgcggtgtac gcgtttgcac ggacggcgga cgatatggcg gacgagggca gtatgccgtc
     7081 tgaagccagg ttggcggggt tggagggttt gcagcgcgag ttggacgtgt tggcatcggg
     7141 cggccggtcg gcgcatcctt tgattgcacg attggatgcc gaggcggttg tgccgttcgg
     7201 tttggatttg cagccgtttt atgatttgct ttctgcattt tctcaggatg tggttaaaac
     7261 gcggtacgcg catttcggcg agctggccga ttattgtcgg cgttccgcca accctgtcgg
     7321 acgcattatg ctggctttgt acgggaaaac ggatgcggtg tgcgtggcgc aaagcgacgg
     7381 tatctgtacg gctttgcaac tggtgaattt ttggcaggat gtggctgtgg attggcaaaa
     7441 gggcagggtt tatatcccgc aggacgattt gttgaaattc ggtgtttccg aaggacagat
     7501 tgcggagggt agggcggatg cggcgtttca gcggctgatg gcgtatgagt gccggcgcgc
     7561 attccgtatg ctgaaggcgg gttcgccttt ggcgcgcgaa ttgaaagggc gtatcggttt
     7621 ggaactccgt atgattgtgt tgggggcgca gttgattttg cagaaactgg acgcgtgccg
     7681 atacgatgtg tttgcacaac gtccggtttt ggataagaag gattggttga ttatgttgaa
     7741 acgcgcgttg tggaaatgat gggggaaatg aatgccgtct gaaaggggtt gttccgcttc
     7801 agacggcatt ttgcaggcgg ttggtatggt caggcgattt tatgcgggtt caacctggct
     7861 tgatcttctg cacccaagcc gatgagtttg cgcagtcggg tcatgtagaa attgacatcc
     7921 aaaccggtgc cgtagcgttg cgccgtccac agtgtttccg ccagtgcctc catcatttcg
     7981 tgttcggctt ccagccagcc gcgtttggcg cacagggtgt cgtggattgc gcgtatgccg
     8041 tgcggctggt ctatgcccgc ctgttcttgg acggacaaat gcagcgacat atgcaggaag
     8101 gggttgcttt cgccgttttc gggcagccag tcggtgtcca gatggtcttc gatgcgttcg
     8161 agataacggt ggtattcggg atgggcttcg ataatgcgga gggctttctg ttccagtgcg
     8221 ctcagttgca gcggattgag ccgctgctgc cacacgcggg cgaaaaagcg gcggacatcg
     8281 tgggtattga catcgtacat ggcgggttcg gtaagatgtt tatggaaata ggttcggata
     8341 atggcgggtt ttacataaat taaatcccac cgtcaacctt accatttata atgcagacaa
     8401 attatttgtc tgaaacggat tcgattatga aaaaactgat ttgcctgttc gccgtatttt
     8461 tgatgttgtg cggacgagct ttcgcgctgg atgcgaacga tctgctgccg ccggaaaagg
     8521 cattcgtgcc ggagcttgcc gttgccgacg acggtgtgaa cgtccgtttc aggattgccg
     8581 acggatacta tatgtatcag gcgaaaatcg tcggcaagac caatccggcg gatttgttgg
     8641 gacagccttc tttcagcaag ggcgaagaga aggaagacga gtttttcggc aggcagacgg
     8701 tttaccatca cgaagcgcag gttgcctttc cttatgcaaa ggctgtcggc gaaccgtata
     8761 aattggtttt gacctatcag ggctgtgccg aagtcggcgt gtgctatccg cccgtggata
     8821 ccgagtttga tatttccggc aacggcactt accatccgca aaccgacgaa ccggcatccg
     8881 ccaaagaccg ctttttgcag ccttcctctc aaaacggcag cggggcgctg ccgcccccga
     8941 agggggatga gggcggcgac agccgtttca agctgtcttg ggatacgctc aacgccaatc
     9001 ttttggcgtt ttttctcgcc ggtttgggtc tgagttttac cgcctgtatg tatcccctgt
     9061 tgccgattgt ttccagtatt gtggtcggcg acaaaaaggc gggcaaggcg cgggcgtttg
     9121 tgctgtccgt cgtttatgtt cagggtttgg ctctgactta tacgctggtc ggcattgttg
     9181 ccggactgac gggcgcgctg ctgaccgtat ggttgcagca ggcttgggtc gtgttggcgg
     9241 catcggcttt gatggtcgtc ttggcactgt ctatgttcgg gctgttcaac atccagcttc
     9301 ccaacgccgt gcagtcgtat tttcagaatc aaagcagcag gctttcaggc ggtaaaatcg
     9361 tttccgtctt tattatgggc atattgtccg cgctgattgt cgggccgtgc gtcgccccgc
     9421 cgctggcatt tgctttgggc tacatcggtc agacgggcga tgcggtttta ggcggtttgg
     9481 cactttacac tttggcgttg ggcaccggcg ttccgctgat tgccatcggc acgttcggcg
     9541 ggcatatcct gcctaaggca ggcgattgga tgaatgccgt caaatacgct ttcggcttta
     9601 tcctgcttgc cgtcgccgtt tacctcgcca cgccgcactt gccctattat ctcgtcgtcg
     9661 cgctgtacac gctgctgatg ctggttcctg cctgtatgct gctggtcaac ggacgcaggc
     9721 agaaacgccg tccgaaagct gtggcattcg cattgggcgg catattgctg ataggcggcg
     9781 cgtggttcgg ctggcagggc gcaaacggca aaacgaccgc gctgcaccat ttcctgaccc
     9841 tcaatccgcc ggccgaagca ggcaaatctt cggaacacgg aaaaatgttt gccgatactg
     9901 ccgcgctgaa ggcagcgatg gatacggcgt tgaaagaaca tcccgacaaa cccgtcgttt
     9961 tggattttta tgccgactgg tgcatttcct gcaaagaaat ggcggcttac acgctcaatc
    10021 agccggaagt gcatcaggca gtcgatatgg aacgcttttt ccaaatcgac gtaaccgcca
    10081 acaagcccga acatcaggcg ttgttgaaag aatacggtct gttcgggccg ccgggcgtgt
    10141 ttgtcgtccg ctccgacggc agccgcagcg agccgctgct gggttttgtc aaagcagaca
    10201 agtttatcga gtggtatgaa caaaaccgct gattccgatg tttcaaatgc cgtctgaagt
    10261 tctcagacgg catttttgtc agaaaggaaa acggcaatat ccactataca cacggaagca
    10321 gtctaaagat gtgaaaaccg tgtgtataag ttagtttgcg tattgaaatt aaaagataaa
    10381 aatacgatga ttaaaaaata ggcataagaa aagataaaca cagccggtgt ttgccggtgt
    10441 gtgtatcttt tgtggaaaaa catcttaatg tcatgtattt tatggaaaat aataacatga
    10501 ttaaaaaata gtcaatcatt atagtggatt aaatttaaat caggacaagg cgacgaagcc
    10561 gcagacagta cagatagtac ggcaaggcga ggcaacgccg tactgattta aatttaatcc
    10621 actataaggt tcaggtaagc ggctgcaacc gtcaatgtct gaaaagaggc agtgctgttt
    10681 aagcatggaa agccggataa aaaaaactgc ctccgtttcc ggaggcagtt cgtgtgcgga
    10741 taaaacctta cagaccgctc aaacgggcag tgtcgtgggc aatcatcagc tcttcgttgg
    10801 tcggaatgac cacggcaacg gctttgctgt cggcagtggt aatcacgccg gcgttgccga
    10861 agcgggcttt caggttggct tcttggtcga tgttcagacc gaggaagccc aagtagccga
    10921 tcacgcgttc gcggatgatg tcggagtttt cgccgatgcc gccggtaaag accagtgcgt
    10981 ccaaaccgcc tgcggcaacc gccatactgc cgatgtattt ggcaaggcgg tagataaaca
    11041 tatccaaggc caatttcgcg cctttatgcc ccttggcggc ttcttcttca atggtgcggc
    11101 agtcgttgga caggccggaa atgccgagca gaccggattt tttgttcagc atttcagtga
    11161 tttgggcgat ggtcatattg gcgttttcgg cgagaaagcc gaatacggaa ggatcgatgt
    11221 cgccgctgcg cgtacccatt accagccctt ccagcggggt caggcccata ctggtgtcgc
    11281 gcgattcgcc gttggcgacg gcggtaatgg acgcgccgtt gcccaagtgg gcaatgacca
    11341 tacgcaggtc ttttttgtct ttgccgagga agcgcgcggt ttcgtcggcg acgaagcggt
    11401 agctggtacc gtgcgcgccg taacggcgca ggccgtattt ttcatacaac tcctgcggaa
    11461 cggcgtattt gtaggcgact tcgggcatgg tttggtggaa ggaggtatcg aatacgacga
    11521 cgttgggcag gtctttgaaa atgctttgcg cggcacgcag gcccaagagg tgggcggggt
    11581 tgtgcagggg ggcgagcggg atgcattttt cgatgccggc aatgacttcg tcgtcaacga
    11641 ggatggattc gctgtacagt tcgccgccgc tgacgacgcg gtggccgatg gcgccgatgc
    11701 ggctgtcgag gccgtgggct ttgagttctt ccatcagggc ttcgaccgcg ccggtgtggt
    11761 tgggatgtgc ggacagatcg actttgtgtt tttcgccgtt tactttgaat gtgatgtagg
    11821 catcgggcag gttgagtttt tcggcaaggc agctgagcag gacttcgccg ctgccgttat
    11881 ccaggaccgc gcctttgagg gacgagctgc cgcagttcaa aaccaagatc aatttttggg
    11941 acattttctt actccggaaa gtttcagacg gcattggaat cggacacgga tactaaccgg
    12001 attcgtgccg aatccgtttt gccttcctgg gcgggaaagt agtggggccg tctgaaaagg
    12061 ttgataaaag aagcaggcta ttctagcaaa aaatctttgc aattgcttgg cttaatcggg
    12121 cgtttgcgtg aaaatggcgg aagtcgggca ttttgacgga aaaaaggggg atatgcggtt
    12181 tgccggtgtt ttcggctggg ggagggagaa tttctttgca ttcttcccgt ccaaactggt
    12241 acattcgccc tgtttttagt tggtgtcgtc tgaaaaaagg cgggtgggaa atttatgcat
    12301 tatttcagta ttcatgacca atcgggacgg catataggct ttttcatcct gcttgccgac
    12361 gacgaatcgg aagcacggcc gcaaagcggg cgttttgccg tcaaacttga aggcggaatg
    12421 gaaaatcatg tcctgtcgcc gttcggtcag acggaaatcc cccaatattg gcgcgtggtc
    12481 aaagaccgta tcgagctgtt ttttgacgaa gctcccgtcg gaactttgcg taacgaatat
    12541 ctgaccgtgt cggggcagac ttttgttttg aacgatttga cagggaatat gtgatggaaa
    12601 gcatgtttat attggtgccc atcagcatta ttttggcgtt tgtcatcggc tggttttttt
    12661 ggtggtcggg caaaaacggg cagtttgacg acttggaagg gccggcgcac cgcatcctga
    12721 tggatgatga ttcgacaagt aaactgattg aaaaagagag ggaaaacgat gtacgctaaa
    12781 aaaggcggtt tgggactggt taaaagccgc cgtttcgcac ctcttttcgc tacgcagttt
    12841 ctcggcgcgt tcaacgacaa tgtgttcaaa accgcgctgt ttgtgatgat tgggttttac
    12901 ggtttggggc aaaacggctt cctgcctgcc ggacagatgt tgaacttggg cgcgttgttg
    12961 tttattttgc cgtatttcct gttttcctcg ctgtcggggc agttgggtaa caaattcgac
    13021 aaggccgttt tggcgcgttg ggtcaaggtg ctggaaatga tcattatggc ggtggcggca
    13081 tacgggtttt atatccggtc tgccccgctg cttttggcgt gtctgttttg catgggcgcg
    13141 caatcgacgc tgttcgggcc gctgaaatac gccatcctgc ccgattatct cgacgacaaa
    13201 gagttgatga tgggcaacag cctgattgaa tcgggtacgt ttgtcgccat cctgttcggt
    13261 cagattttgg gaacggcggt ggcaggtgta ccgccttata ttgtcgggat actggttttg
    13321 ctggtcgccg tcggaggcac ggtcggcagc ctgtttatgc cgtccgtccc cgccaaggct
    13381 gccgataccc aaattgagtg gaatattgtc cgtggcacaa aatccctgct tcgtgaaacg
    13441 gtgcggtaca aacccgtctt taccgctatt atcggtattt cgtggttttg gtttgtcggc
    13501 gcggtttata ccacgcaact gccgaccttt acccaaatcc atctgggcgg caacgacaat
    13561 gttttcaacc tgatgcttgc cctgttttcc atcggtattg ccgccggttc ggtactgtgt
    13621 gccaagttca gcagggaacg cctgatgttg gcttgggtaa cggttggtgc gttgggtttg
    13681 acggtttgcg gcctggtttt ggtgtggctg acgcacggac accgttttga agggctgaac
    13741 ggcatttttt ggtttttatc gcaaggatgg gcatatcccg tgatggcggt gatgacgctg
    13801 atcggctttt tcggcggatt tttctccgtt ccgctctata cctggctgca aaccgccagt
    13861 agcgagactt tccgcgcccg cgccgttgcc gccaacaata tcgttaacgg tatttttatg
    13921 gtttccgccg ccgttttgag cgcggtgttg ctgtttttgt ttgacagcat ttccttgttg
    13981 tatctgattg tcgctttggg caatattccg ttgtcggtat ttttgattaa gcgcgaaagg
    14041 cggtttttag gcgcggcggc aatcaggaaa aaaccttgaa tgccgtctga aaaaattgtc
    14101 cccaaaatac acaatccgcc tgcccaatgt tgtgaacaca ctgtgaataa gtgggtttgt
    14161 gcattgaaat gaaaacagaa aaatatattg cttaaaaaat agtcagcaga tggaaaattt
    14221 gaagaaagaa gcagacatga ttcaacgcca aatcatcctc gataccgaaa ccaccggtct
    14281 gtatgccgac ggcggcgacc gcttggtcga gtttgccggt ttagaaatgg tcaaccgcca
    14341 aatgaccgac aaaaacctgc acctctatgt ccaccccgag cgcgatatgc ctgaagaggc
    14401 ggcgagggtg cacggtctga cgatagaggt tttggaaggg aaaaacgcac cgccttttgc
    14461 agaggtcggc aggcagattg ccgatttcct gcgcggtgcg gaactgatta tccacaatgc
    14521 caaattcgac gtgggcttcc tcaatatgga gttccgccgg atggggttgc cgaccgttga
    14581 ggaactcggc tgtaccgtta ccgataccct ggcgatggcg cgcgaaatgt tccccgggca
    14641 gaaagccagc ctggatgccc tgtgcaaccg tttttccgtc gaccgcagca agcgcgtcct
    14701 gcacggcgca ttgatcgact gcgaactttt gggcgaagtc tatcttgcta tgacgcggcg
    14761 gcagttcgac ctgatgggtg cggccgcaga ggaaaaaatg gaaaccaaac ccgtggtgca
    14821 taccgaaacc aaacgcagcg gcaaactgaa agtcatcagg gcggacgaaa acgagttggc
    14881 ggcgcacggg caatatttgg acggcttggg cgaagcctgt atctggcgca aggaagccgt
    14941 gccgtctgaa aacggcggga cggacgcatg aagcgcaaaa atatcgcgct gattcccgcc
    15001 gccggcatcg gggcgcgttt cggtgcggac aaacccaagc aatatgtcga aatcggaagc
    15061 aaaaccgttt tagaacatac gcttgggatt tttgaacggc atgagggcgt cgatttgacc
    15121 gtcgttgtcg tctcgcccga agacacgttt gccgataagg ttcagacggc atttccacag
    15181 gttcgggtgt ggaaaaacgg cggacagacc cgcgccgaaa ccgtccgaaa cggtgtggca
    15241 aaattgttgg aaaccggttt ggcggcggaa accgacaata ttctggtaca cgatgccgcg
    15301 cgttgctgcc tgccgtctga agctttgacg cggttgatag aacaggcggg caacgctgcc
    15361 gaaggtggga ttttggcaat tcccgttgcc gatacgctca agcgcgcgga cggtgggaac
    15421 attagtgcaa ccgtcgagcg gacgagcctt tggcaggcac aaacgccgca gcttttccgc
    15481 gccgggctgc tgcaccgcgc attggctgcg gaaaacttgg acggcattac cgatgaagcg
    15541 tccgccgtcg aaaaattggg catccaccct ttgctggtgc agggcgacgc gcgcaatttg
    15601 aaactgacgc agccgcagga cgcatacatc gtcaggctgc tgctcgatgc cgtctgaact
    15661 tcaattcaaa acatcaggaa cacaaacgat gacgaacatc cgtatcggac agggctacga
    15721 tgtccaccaa ctgaccgaag gcagaaagct gatacttggc ggagttgaaa tcccatttga
    15781 aaaagggctg ctcggacact ccgatgccga tgcgctgctg cacgccgtta ccgacgcgct
    15841 gctcggtgcg gcaggtttgg gcgatatcgg cagccatttc cccgacaccg ccgcagagtt
    15901 caaagatgcg gacagccgcg tccttttgcg tgcggcgtat caaagcgttc aggcgcaggg
    15961 ttggcaggcg gtcaatgtcg atacgaccgt gattgcacag aaacccaaac tcgcgccgca
    16021 tattccgcaa atgcgtgcca acatcgccgc cgatttgggc atagacattt cgtgcgtcaa
    16081 catcaaaggc aaaaccaacg aaaaactcgg ttatctcggg cgcatggaag gcatagaggc
    16141 gcaggcggcg gtattgctgg tacggatttg aacgcggcgg gcaggacgtg caaaaaaatg
    16201 ttaagatggc ggctgtttgt tgatacggtt tcccaaagga caaaaatatg acgacacaag
    16261 acgaactcaa gcgcatcgcc gccgaaaaag cagtcgaatt cgtacccgaa aacgaataca
    16321 tcggcatcgg taccggctcg accatcaact ttttcatcga agccttgggt aagagcggca
    16381 aaaaaatcaa aggcgcggta tctacttcca aaaaatccag tgaactgctt gcccaatatg
    16441 atattcccgt cgtttccctg aacgaagtat cggggttggc ggtctatatt gacggtgcgg
    16501 atgaagtgaa ccacgccctg caaatgatta aaggcggcgg cggcgcacac ctcaacgaaa
    16561 aaatcgtcgc cagcgcatca gaaaaattcg tctgcattgc ggacgaaagc aaatatgttt
    16621 cacgtttggg caaattccct ctgcccgtgg aagtcgtcga aagcgcgcgt tcccttgttt
    16681 cgcgcaaact gctcgctatg ggcggacagc ctgaattgcg tatcggctac accacttttt
    16741 acggcaacca aatcgtcgat gtccacggct tgaatatcga caaaccgctg atgatggaag
    16801 acgaaatcaa caaaatcacc ggcgtactcg aaaacggaat attcgcccgc gatgccgccg
    16861 atgtgttgat tttggggacg gaagagggtg cgaaagtcat ctatccctgc caagggtaat
    16921 cctgacgtta agatgccgtc tgaaatccgg ttcagagatg ttcagacggc atcggcattt
    16981 gaaaaatatg cagattaaaa aaatcatgaa atggcttccc gtcgccctgt cgcttttggg
    17041 tgcgttgggt tatacggggt acggcagcga ggcggtgcgg acggcggttg ccgtactcga
    17101 cgtactcggc gcggcagggg acgcgggttc cgacgcgccc gcccgccgcc gagcatcggc
    17161 gaaatccggc caccgctaca caggcacggt gtccaaagtc tatgacggcg acacccttca
    17221 cgttatcgac ggcgacggcg cgaaacacaa aatccggatg gcgtatatcg acgcgccgga
    17281 gatgaaacag gcttacggca cgcgttcgcg cgacaacctg cgcgcggcgg cggaaggcag
    17341 gaaagtcagc gtgcgcgtgt tcgacaccga ccgctaccag cgcgaagtgg cgcaggtttc
    17401 tgtcggcaaa accgatttga acctgatgca ggtgcaggac ggggcggcgt ggcattataa
    17461 aagttatgct aaagaacagc aggataaggc ggattttgcc gattatgccg acgctcaaat
    17521 tcaggcggaa agggaacgca aaggattgtg gaaagctaaa aatccgcaag cgccgtgggc
    17581 gtaccgccgg gcaggcagga gcggcggggg caataaggat tggatggatg ccgtgggcga
    17641 atggttgggc atttggtaaa gacagcgcac ggctttgaac ggcaaatgcc gtctgaaaac
    17701 cgcgcgccct gcatttttgc ggagacgcgc aaccgccgtc tgccgcgata aaaaagttca
    17761 ggcggcggtt tttacggtaa aatggcggat tattttgcaa cggcggcagt tccgccggtt
    17821 tttgatacgg acggtatatg gattttcgtt ttgacattat ttacgaatac cgctggatgt
    17881 tcctttacgg cgcactgacg accttggggc tgacggtcgt ggcgacggcg ggcggttcgg
    17941 tattgggtct gttgttggcg ttggcgcgcc tgattcactt ggaaaaagcc ggtgcgccga
    18001 tgcgcgtgct ggcgtgggcg ttgcgtaaag tttcgctgct gtatgttacg ctgttccggg
    18061 gtacgccgct gtttgtgcag attgtgattt gggcgtatgt gtggtttccg tttttcgtcc
    18121 atccttcaga cggcattttg gtcagcggcg aggcggcaat cgcgctgcgt cgcggatacg
    18181 ggccgctgat tgccggttct ttggcactga tcgccaactc gggggcgtat atctgtgaga
    18241 ttttccgcgc gggcatccag tctatagaca aaggacagat ggaggcggcg cgttctttgg
    18301 ggctgaccta tccgcaggcg atgcgctatg tgattctgcc gcaggcattg cgccgcatgc
    18361 tgccgccttt ggcgagcgag ttcatcacgc tcttgaaaga cagctcgctg ctgtcggtca
    18421 ttgctgtggc ggagttggcg tatgttcaga atacgattac gggccggtat tcggtttatg
    18481 aagaaccgct ttacaccgtc gccctgattt atctgttgat gacgactttc ttaggctgga
    18541 tattcctgcg tttggaaaaa cgttacaatc cgcaacaccg ctgattggag tcatatcaac
    18601 aaaaagctgc ccgggtattc atttgaggca gcttttttgt ggcaaattta t
//
LOCUS       DAXHKG010000030        18497 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.030, whole genome shotgun sequence.
ACCESSION   DAXHKG010000030 DAXHKG010000000
VERSION     DAXHKG010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.030"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            41..454
                     /locus_tag="ACFMWP_000775"
     CDS             41..454
                     /locus_tag="ACFMWP_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HFC5891412.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            500..1129
                     /gene="nth"
                     /locus_tag="ACFMWP_000776"
     CDS             500..1129
                     /gene="nth"
                     /locus_tag="ACFMWP_000776"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HFC5891413.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1267..2766
                     /locus_tag="ACFMWP_000777"
     CDS             1267..2766
                     /locus_tag="ACFMWP_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HFC5891414.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLIMRRGNTLFIALNLQ"
     gene            2966..4486
                     /locus_tag="ACFMWP_000778"
     CDS             2966..4486
                     /locus_tag="ACFMWP_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HFC5891415.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAIITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDGSRGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVDPSLIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4543..5628
                     /gene="nagZ"
                     /locus_tag="ACFMWP_000779"
     CDS             4543..5628
                     /gene="nagZ"
                     /locus_tag="ACFMWP_000779"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HFC5891416.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAVGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGLKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5856..5932
                     /locus_tag="ACFMWP_000780"
     tRNA            5856..5932
                     /locus_tag="ACFMWP_000780"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5890..5892,aa:Pro,seq:cgg)
     gene            complement(6268..6906)
                     /locus_tag="ACFMWP_000781"
     CDS             complement(6268..6906)
                     /locus_tag="ACFMWP_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HFC5891417.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGIPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYEKSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(6903..7274)
                     /locus_tag="ACFMWP_000782"
     CDS             complement(6903..7274)
                     /locus_tag="ACFMWP_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HFC5891418.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(7543..7965)
                     /gene="queD"
                     /locus_tag="ACFMWP_000783"
     CDS             complement(7543..7965)
                     /gene="queD"
                     /locus_tag="ACFMWP_000783"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HFC5891419.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNSRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(7972..8487)
                     /locus_tag="ACFMWP_000784"
     CDS             complement(7972..8487)
                     /locus_tag="ACFMWP_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HFC5891420.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDHVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(8515..9174)
                     /gene="queC"
                     /locus_tag="ACFMWP_000785"
     CDS             complement(8515..9174)
                     /gene="queC"
                     /locus_tag="ACFMWP_000785"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HFC5891421.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            9279..9704
                     /locus_tag="ACFMWP_000786"
     CDS             9279..9704
                     /locus_tag="ACFMWP_000786"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891422.1"
                     /translation="MPSEHAAYADLMASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSAGGIAGATVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            9719..10945
                     /locus_tag="ACFMWP_000787"
     CDS             9719..10945
                     /locus_tag="ACFMWP_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HFC5891423.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWR
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(10966..11300)
                     /locus_tag="ACFMWP_000788"
                     /pseudo
     CDS             complement(10966..11300)
                     /locus_tag="ACFMWP_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(11325..11459)
                     /locus_tag="ACFMWP_000789"
                     /pseudo
     CDS             complement(11325..11459)
                     /locus_tag="ACFMWP_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(11458..11916)
                     /locus_tag="ACFMWP_000790"
     CDS             complement(11458..11916)
                     /locus_tag="ACFMWP_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891424.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGTEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(12480..12683)
                     /locus_tag="ACFMWP_000791"
     CDS             complement(12480..12683)
                     /locus_tag="ACFMWP_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891425.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
     gene            complement(13247..14182)
                     /locus_tag="ACFMWP_000792"
     CDS             complement(13247..14182)
                     /locus_tag="ACFMWP_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HFC5891426.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPESIDYVDERKGVP
                     LAAMKYILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
     gene            complement(14185..14805)
                     /locus_tag="ACFMWP_000793"
     CDS             complement(14185..14805)
                     /locus_tag="ACFMWP_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891427.1"
                     /translation="MLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQIELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQVVKSLPD
                     GSPAKAVVLKANQNGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            complement(14983..15261)
                     /locus_tag="ACFMWP_000794"
                     /pseudo
     CDS             complement(14983..15261)
                     /locus_tag="ACFMWP_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
     gene            complement(15357..15629)
                     /locus_tag="ACFMWP_000795"
     CDS             complement(15357..15629)
                     /locus_tag="ACFMWP_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891428.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
     gene            complement(15817..16305)
                     /locus_tag="ACFMWP_000796"
     CDS             complement(15817..16305)
                     /locus_tag="ACFMWP_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891429.1"
                     /translation="MKKDIFYCEQWSYGYKRLHKPFSEKQAEEKHIKGELYSAVIGSA
                     TQPEYVITLREEVGFFSVDFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRDYITLDSH
                     DLAEGYTYFFNENTDDCYVLKEDFINNERYEKTELYSQKDKVILFPKFGEYDLVLNPD
                     II"
     gene            complement(16302..>18497)
                     /locus_tag="ACFMWP_000797"
     CDS             complement(16302..>18497)
                     /locus_tag="ACFMWP_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC5891430.1"
                     /translation="IDIKSGGSIDAYATVFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSHKKRKFLGITYDKVHDTSTQQMQTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     AVIRAGVGDQARADAKIILEGIKSSIHTETVSSSKSALWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYIVDIPKGNLKTQIETLTKQPEYAYLKQLQVAKNINWNQVQLAYDK
                     WDYKQEGMTPAAAAVVVIVVTVLTYGALSAPAAAGTAGAAGAGAGGAAAGTAAGTGVA
                     AGTAATTGVAAGTSAAAITTAAGKAALASLASQAAVSLINNKGDINHTLKELGKSSTV
                     RQAATAAVTAGVLQGISGLNTQAAEAVSKHFHSPAAGKLTANLINSTAAASVHTAING
                     GSLKDNLGDAALGAIVSTVHGEVASKIKFNLSEDYIAHKIAHAIAGCAAAVANKGKCR
                     DGAIGAAVGEMVGETLLDGRDVGKLSPQERQKVIAYSQIIAGSAVALVKGDVNTAANA
                     ATVAVENNSLLARRRVNIRWTPRQELEHEYAILEIQAITNQIRRLDPKFNGIAIMRNP
                     REPWTRHDVQTYRQYYNQLRESRGIPVLPIYRMRINNGNEFNRIMSSKYPYNELYVAN
                     PKSVTGHFRVDSYNPATREIISRKFTQFSQIQESTGIGYIKEAVRKYSPGAVISNVPS
                     TPASLRGRKLTGKLILEVPAQVNPIPQSVLRAAQEENVIIRDTTGRIYK"
BASE COUNT         4355 a         4763 c         4441 g         4938 t
ORIGIN      
        1 caatccgtcg ccgatttttg cctgtttgag actgtttgca atgatgcccg cctacgccta
       61 cgccgcgctc gccttttccg ccttcacttc cgccaccctc ctgcccggca catccgaagc
      121 cgcctttgcc ctgttcgtcc gccgctttcc cgaacacgca tacggcgcgt tgctgtgcgc
      181 cggccttgcc aacggattgg gcagtatggt ttcctattgg atgggacgtt tgctgccttc
      241 ccgaaaaatg ccgtctgaaa aaacactgaa tctgatgcgg cgtttcggta tttggctgct
      301 tccgtttgcc tggctgcccg tcgtcggcga cgcactgccg cttgccgccg gctggctgcg
      361 gttgaatccg tggacaagcg ggctgatgct ggttatcggc aaaacggcgc gttacgcctt
      421 cattctgtgg ggaatgcaat attacgccgc ctgaaccgtg cgttataatg ccgaccgcac
      481 aaaccgactg cacaaaaaaa tgaacagaca catccgccaa gaaattttcg aacgcttccg
      541 cgccgccaac ccccatccga ccaccgagct gaatttcaac tcccctttcg agcttttaat
      601 tgccgttctg ctttcggcgc aggcgaccga tgtcggcgta aacaaggcga cggcgaagct
      661 gtttccggtt gccgatacgc cgcaggcgat gctggatttg ggtttggacg gcgtgatgga
      721 atacacgaaa accatcgggc tgtataaaac caagtccaag cacatcatgc aaacctgccg
      781 catcctgctg gaaaaataca acggcgaagt gccggaagac cgcgaggctt tggaatcgtt
      841 gcctggcgtg gggcgcaaaa cggcaaacgt ggtattgaac acagcgttcg gacaccccgt
      901 tatggcggtc gatacgcata ttttccgcgt gtccaaccga accaaaatcg cccccgggaa
      961 agatgtgcgc gaagtcgaag acaaactgat gcgcttcatt cctaaagaat ttctgatgga
     1021 cgcgcaccac tggctgattt tgcacggacg ctacacctgc aaggcactca aaccgcaatg
     1081 ccaaacctgc atcatcaacg atttgtgcga atatcccgcc aaagcctgac cgccgccgcc
     1141 cttcaaaatg aaacgcttga aaattcggac ggacgttgta gaatttcaac ctatgccgtc
     1201 tgaagccgac aaaatgcgct tcagacggca ttaaagccgg taccggcatc cgacaaagga
     1261 caaaacgtgt tcaaaaaata ccaatacctc gctttggcag cactgtgtgc cgcctcgctg
     1321 gcaggctgcg acaaagccgg cagctttttc ggtgcggaca aaaaagaagc atctttcgta
     1381 gaacgcatcg aacacaccaa agacgacggc agcgtcagta tgctgctgcc cgactttgtc
     1441 caactggttc aaagcgaagg cccggcagtc gtcaatattc aggcagcccc cgccccgcgc
     1501 acccaaaacg gcagcagcaa tgccgaaacc gattccgacc cgcttgccga cagcgacccg
     1561 ttctacgaat ttttcaaacg cctcgtcccg aacatgcccg aaatccccca agaagaagca
     1621 gatgacggcg gattgaactt cggttcgggc ttcatcatca gcaaagacgg ctatattctg
     1681 accaatacgc acgtcgttac cggcatgggc agtatcaaag tcctgctcaa cgacaagcgc
     1741 gaatataccg ccaaactcat cggttcggat gtccaatccg atgtcgccct tctgaaaatc
     1801 gacgcaacgg aagagctgcc cgtcgtcaaa atcggcaatc ccaaagattt gaaaccaggc
     1861 gaatgggtcg ctgccatcgg cgcgcccttc ggcttcgaca acagcgtgac cgccggcatc
     1921 gtgtccgcca aaggcagaag cctgcccaac gaaagctaca cacctttcat ccaaaccgac
     1981 gttgccatca atccgggcaa ctccggcggc ccgctgttca acttaaaagg acaggtcgtc
     2041 ggcatcaact cgcaaatata cagccgcagc ggcggattca tgggcatttc cttcgccatc
     2101 ccgattgacg ttgccatgaa tgtcgccgaa cagctgaaaa acaccggcaa agtccaacgc
     2161 ggacaactgg gcgtgattat tcaagaagta tcctacggtt tggcacaatc gttcggtttg
     2221 gacaaagccg gcggcgcact gattgccaaa atcctgcccg gcagccccgc agaacgtgcc
     2281 ggcctgcagg cgggcgacat cgtcctcagc ctcgacggcg gagaaatacg ttcttccggc
     2341 gaccttcccg ttatggtcgg cgccattacg ccgggaaaag aagtcagcct cggcgtatgg
     2401 cgcaaaggcg aagaaatcac aatcaaagtc aagctgggca acgccgccga gcatatcggc
     2461 gcatcatcca aaacagatga agccccctac accgaacagc aatccggtac gttctcggtc
     2521 gaatccgcag gcattaccct tcagacacat accgacagca gcggcggaca cctcgtcgtc
     2581 gtacgggttt ccgacgcggc agaacgcgca ggcttgaggc gcggcgacga aattcttgcc
     2641 gtcgggcaag tccccgtcaa tgacgaagcc ggtttccgca aagctatgga caaggcaggc
     2701 aaaaacgtcc ccctgctgat catgcgccgt ggcaacacgc tgtttatcgc attaaacctg
     2761 caataacaca cataatttaa ccaaaatatt ttttaaatga taaaatgccc gtcaataccg
     2821 attaacgggc attttaaaaa atcagttaat tgatttcaaa taagtatttt ccggaacaga
     2881 aaatactttc gcccattttg ccaacaaaat ccgaaccgtt gcggacagaa accgccccat
     2941 ccggacgctt aacaccccca taaccatgca gctgatcgac tattcacatt catttttctc
     3001 ggttgtgcca ccctttttgg cactggcact tgccatcatt acccgccgcg tactgctgtc
     3061 tttaggcatc ggtattctgg tcggcgttgc ctttttggtc ggcggcaacc ccgtcgacgg
     3121 tctgacacac ctgaaagaca tggtcgtcgg cttggcttgg tcagacggcg attggtcgct
     3181 gggcaaacca aaaatcctgg ttttcctgat acttttgggt atttttactt ccctgctgac
     3241 ctactccggc agcaatcagg cgtttgccga ctgggcaaaa cggcacatta aaaaccggcg
     3301 cggcgcgaaa atgctgaccg cctgcctcgt gttcgtaacc tttatcgacg actatttcca
     3361 cagcctcgcc gtcggtgcga ttgcccgccc cgttaccgac aagtttaaag tttcccgcgc
     3421 caaactcgcc tacatcctcg actccactgc cgcgcctatg tgcgtgctga tgcctgtttc
     3481 aagttggggc gcgtcgatta tcgccacgct tgccggattg ctcgttacct acaaaatcac
     3541 cgaatacacg ccgatgggga cgtttgtcgc catgagcctg atgaactatt acgcgctgtt
     3601 tgccctgatt atggtgttcg tcgtcgcatg gttttccttc gacatcggct cgatggcgcg
     3661 tttcgaacaa gccgcgttga acgaagccca cgatgaaact gccgtttcag acggcagccg
     3721 gggcagggtt tacgcattga ttattcccgt tttggcctta atcgcctcaa cggtttccgc
     3781 catgatctac accggcgcgc aggcaagcga aaccttcagc attttggggg catttgaaaa
     3841 cacggacgta aacacttcgc tggtattcgg cggcacttgc ggcgtccttg ccgtcgttct
     3901 ctgcacgctc ggcacgatta aaaccgccga ctatcccaaa gccgtttggc agggtgcgaa
     3961 atctatgttc ggcgcaatcg ccattttaat cctcgcttgg ctcatcagta cggttgtcgg
     4021 cgaaatgcac accggcgatt acctctccac actggttgcg ggcaacatcc atcccggctt
     4081 cctgcccgtc atcctcttcc tgctcgccag cgtgatggcg tttgccacag gcacaagctg
     4141 ggggacgttc ggcattatgc tgccgattgc cgccgccatg gcggtcaaag tcgatccctc
     4201 actgattatc ccgtgtatgt ccgcagtaat ggcgggggcg gtatgcggcg accactgttc
     4261 gcccatctcc gacacgacca tcctgtcgtc cacaggcgcg cgctgcaacc acatcgacca
     4321 cgttacctcg caactgcctt acgccttaac cgttgccgcc gccgccgcat cgggctacct
     4381 cgcattgggt ctgacaaaat ccgcgctgtt gggctttggc acgacaggca ttgtattggc
     4441 ggtgctgatt tttctgttga aagataaaaa acgcgccaac gcctgacccc tttccctgtt
     4501 cagacggcat atgccgtctg aagctttttg gagcaaaccg caatgaccgt cccccatatt
     4561 ccgcgcggcc ccgtcatggc agacattgcc gccttccgcc tgaccgaaga ggaaaagcaa
     4621 cgcctgctcg atcccgccgt aggcggcatc atcctcttcc gccgcaactt ccaaaacatc
     4681 gaacaactca aaacactcac cgccgaaatc aaagccctgc gcacacccga actcattatc
     4741 gccgtcgatc acgaaggcgg cagggtgcaa cgtttcatcg aaggcttcac ccgcctgccc
     4801 gcaatgagta cgctcggcga gatttgggac aaagacggcg cgtccgccgc cgaaaccgcc
     4861 gccggacaag tcggccgggt tttggcaacc gagctttccg cctgcggcat cgatttgtcc
     4921 ttcacgcccg tcttagattt ggactgggga aactgccccg tcatcggcaa ccgcagtttc
     4981 caccacaatc ccgaagcggt cgcccacctc gccctcgccc ttcaaaaagg tttggcaaaa
     5041 ggcggtatga aatcctgcgg caaacatttt cccggacacg gatttgtcga aggagacagc
     5101 catctggtct tgccggaaga caggcgcagc ctgtccgaac tcgaagccgc cgacctcgcc
     5161 cccttccaca ttatgagccg cgaaggtatg gcggcggtta tgcccgccca cgtcgtttat
     5221 ccacaagtgg acacaaagcc cgcagggttt tccgaaatct ggctcaaaca aattttgcgc
     5281 cgcgatatcg gattcaaagg cgtgattttc tcggacgatt tgactatgga gggcgcgtgc
     5341 ggtgtcggcg gcctcaaaga acgcgcccgc atttcctttg aggcaggttg cgacatcgtc
     5401 ctcgtctgca accgtcccga ccttgtggac gaactgcgcg aagatttccg cattcctgac
     5461 aatcccgctt tggcgcaacg ttggcaatat atggccaaca cgctcggcag tgccgccgcg
     5521 caagccgtta tgcagacggc ggatttccaa gaggcgcaag cctttgttgc cggccttgcc
     5581 tcgccgcagg atacagcggg cggcgtaaaa gtcggcgaag ccttttaaac cggctgcgtt
     5641 tcaacaatct gccgatttca tcaaccgttt gtcagggaaa ggcaatgatt ttttcggtca
     5701 ggtagaaagt tatcttattg aattacttaa agataatgat gattatcaac actgtattca
     5761 aacacactcc tttaaatccg cccgacacgc ggcaaaaagg caaaacggta taggcacgcc
     5821 gtattttttg cgctataatc acgccttact taattcggaa tgtagcgcag cccggtagcg
     5881 cacttcgttc gggacgaagg ggtcggaggt tcgaatcctc tcattccgac catattcaaa
     5941 ccgcctcggc atggattgct ggggcggttt ttcccttttg gcgtcaacag aaaaatgccg
     6001 tctgaaacag aatgctgttt cagacggcat ttcgttttcc ctaaccctgc catttgcgcg
     6061 cactggcaca gagtatcggc aaggttcaaa agaccatcgg aatttaggaa gccgagcttg
     6121 tacccaacgg cagcatctta ttcagtaagg ctccgtcctg attgggcggt ggaaatgccg
     6181 gcatttccac gcagaagcgg cacactttcc ccgtatgtca aacatcggta aaaccgtacg
     6241 ccgtcccttt gagttacact gcttaaacta ctctattccc gcccatttgt gcgtctgcac
     6301 gctcaactgc caatgcacgg atgcgtcggg gcgactgttt aaaataccga tttggcggat
     6361 ggtgtcgtag atgttcatcg caccgtcttg ctcacagggc gaaaggtagt aatgatgcgc
     6421 gcggattttg cgttccatat tttcacagaa cgcaaggaca tcgccgtcgg caacaatccg
     6481 cacttcgtcg gctgtttcga tacagctttt ttcgtatttg gcggcatagc aggctttggg
     6541 gctggtggcg acatagtcga tttgcggcgg cgcgggattg agtccgttgg tttcgataca
     6601 gaggaaataa ccttccgcct tgagcatgtc cagcagcata tcgagatgcg gctggatggt
     6661 cggttcgccg ccggtgatga tgatgttgcg ggcggcatag gttttcagac agcctaagat
     6721 gtcggacagg ctcatcatgc cgaatgtcaa ataatcggta tcacaccagc cgcaggcgag
     6781 gttgcatttg cccaagcgga cgaaaacggc gggtatgccc gtgttccagc cttcgccttg
     6841 caggctttca aagatttcga cgatgcggta ttggggattt tcgggggcaa cattgatttt
     6901 tttcataccg ccaacaccgc cgccgctgcc aaaaatgcgg gcaaaccttg tttgacgagt
     6961 atgcctttgt tgccggaaga gaacgcgccc cacgcggcgg caatcaggac gaagccgaga
     7021 aacagtaccg ttgcgccgta caccgcgtta tccggagcgg caaaccgcga ccacaccagc
     7081 ccgatgccga gaaagccgtt atacagccct tggttgccga acagggtctg cacgcgcttt
     7141 tgttccataa attcataagg cagcttgaat atttccgccg ctttttcgct gggaatctgc
     7201 gtcatttcaa gccaggcgat gtagaaatgt tcggcggtga caaggaggac taagagggtg
     7261 gagagaagtt tcatgggtat tccttttaat gggtgtattt gatatggagg gtcgtctgaa
     7321 aaaacgggga atccgtacag gagaaaaaac cgttttacgg taaattcaaa taaggacgct
     7381 ctaaaccgtc ctttccgcgc aggcgggaat ccaaagattt ggaattgctg caatttttaa
     7441 atattcctga aaaaccaagg tctggattcc cgcctgcgcg ggaatgacgc ggttgggcat
     7501 gtcttattgg aatttactat atcgatacgt tcaagatatt ccctactccc cttcatactc
     7561 cgcacacgat gtcggcgttt cccacaattt gacgcggcac acgttcagcc ccgcgttttt
     7621 cagacggtcg tacatttcga ccgccatatt ttcggcagtg gtgcggcagg gcaggcgcag
     7681 ggttttcatg ttccagcctt ccaagagtgc ggcgatttga gattcgcggc tgttgccgcc
     7741 gtggtagatg aaggcgtggt cgaaggggtc ggtaatgtgt tgtttgacaa tggctttcaa
     7801 gtcggtaaag tccatcacca taccgtcttt cgcgccgcct ttgataatgc cgtctgaaac
     7861 ggtgatttcg agtttgtagg tatgtccgtg caagttttgg catttgccgt catgcccgtc
     7921 gagcatatgc gaggagtcga aggtgaagat tttggtgatt ttcatgggtt ctcaaatggg
     7981 caaatagcct tgaaagccga tttcggcggg tttgccgtgc ggattcgggg tcaggcggat
     8041 atggaaattg ccgatgcggt cgagcgcaag caggttgtcc acgtctttta agttgtcttt
     8101 atgttgctga acatggtcgg tcaacagggt ttgcagggct ttttgtttgg cttcggcagg
     8161 cgtggcggcg gcgaacagcc cgaacgcgtg cgcctcggca agctgccccg cgcgataacc
     8221 gccgacattg gcaaaataca ggcgcggggc gtgttcagac ggcatttccg ttttgggcgt
     8281 ttcggatacg gcgatgtcgt aaccgtccgc ccattcgaca acctgccagc cgtcgatgtg
     8341 gattttgtcc gcatcgccga accacgcggc tttgagtgcg gggacggctt cacggtagtc
     8401 gtcgcacacg gcaaattgga tgtcgtgcac ttcgatattc gacctgccgg cattgccgcc
     8461 gaggtaaaac atatggagct tgggcatatc gtattcctta tggtttgcgc gtgttcagac
     8521 ggccttttta ctttccagat attccgccag cccgcgttcg cgcaagatac agctcgggca
     8581 ttcgcggcag ccgccgacga tgccgttata gcaggtgtgg gtttgctcgc ggatatagtc
     8641 cagcacgccc atttcgtccg ccaacgccca cgtttgcgcc ttggtcagat acatcagcgg
     8701 cgtgtggatt tggaaatcat agtccatcgc caaattaagg gtaacgttca tggatttgac
     8761 gaacacgtcg cggcagtcag gatagccgga gaagtcggtt tcgcacacgc ccgcgatgat
     8821 gtgccgtatc ccctgccctt tggcgtaaat cgcggcatag agcaggaaaa gcgcgttgcg
     8881 gccgtctaca aaggtattcg gaacgccgtt ttcggcagtt tcgatggcgg cggtgtcgtc
     8941 catcagggca ttgtgcgtaa tctgccgcat caggctcaag tcgagtacgg tttgtttgac
     9001 gcccaaatcc tgcgcaatcc agcgggcacg ttccagctcg acggcatggc gttgcccgta
     9061 ttggaaagta atggcttgga cgttttcgcg cccgtagatt tggattgcct gaatcaggca
     9121 ggtggtcgaa tcctgaccgc ccgaaaagat gaccaaggct ttttggtttg acatatcgaa
     9181 tcctagtttt ggtaacgcgg gaggtttgcg aaccgcgaag ttggacagta aagacgcgga
     9241 ttatacaggc aaacgcgttc agacggcatc tgaacgccat gccgtctgaa cacgcggctt
     9301 atgccgactt gatggcgagt tccgccaagc gtttgctttg tgcgaaggcg atattgtttt
     9361 cttcggcggt caggacggga gccgctgtcg ggaatatctt ttttgacggc ttcgcagacg
     9421 gcggagactt tggggacggt gcgcaatacg gcttcgcaac cttcaacgct gtcgatgccg
     9481 cgagcgattc ggcgggcggg attgcgggtg ctaccgtttt ggaaatagta gaggacgagg
     9541 attttgaggg ggatttgggt tcatgggcgg attccgttaa aatggttcgg tcttcagacg
     9601 gcataacagt tgttccgatg ccgtctgaaa cagccgcagt tcaggcattt gttcctgacg
     9661 gcaaaattgg ctataacatc gggcatcaat gcccaactta ctgaccgggc aagaaattat
     9721 gaccttttta caacgtttgc aaggtttggc agacaataaa atctgtgcgt ttgcatggtt
     9781 cgtcgtccgc cgctttgatg aagaacgcgt accgcaggcg gcggcaagca tgacgtttac
     9841 gacgctgctg gcactcgtcc ccgtgctgac cgtgatggtg gcggtcgctt cgattttccc
     9901 cgtgttcgac cgctggtcgg attcgttcgt ctccttcgtc aaccaaacca ttgtgccgca
     9961 gggcgcggac atggtgttcg actatatcaa tgcgttccgc gagcaggcga accggctgac
    10021 ggcaatcggc agcgtgatgc tggtcgttac ctcgctgatg ctgattcgga cgatagacaa
    10081 tacgttcaac cgcatctggc gggtcaattc ccagcgtccg tggatgatgc agtttctcgt
    10141 ctattgggct ttactgacgt tcgggccgct gtctttgggc gtgggcattt cctttatggt
    10201 cggctcggta caggatgccg cgcttgcctc aggtgcgccg cagtggtcgg gcgcgttgcg
    10261 aacggcggcg acgctgacct tcatgacgct tttgctgtgg gggctgtacc gcttcgtgcc
    10321 aaaccgcttc gttcccgcgc ggcaggcgtt tgtcggggct ttggcaacag cgttctgtct
    10381 ggaaaccgca cgttccctct tcacttggta tatgggcaac ttcgacggct accgctcgat
    10441 ttacggcgcg tttgccgccg tgccgttttt tctgttgtgg ctgaacctgt tgtggacgct
    10501 ggtcttgggc ggcgcggtgc tgacttcttc actctcctac tggcggggag aagcgttccg
    10561 caggggcttc gactcgcgcg gacggttcga cgacgtgttg aaaatcctgc tgcttctgga
    10621 tgcggcgcaa aaagaaggca aagccttgcc tgttcaggag ttcagacggc atatcaatat
    10681 gggctacgac gagttgggcg agcttttgga aaagctggcg cggcacggct acatctattc
    10741 cggcagacag ggttgggtgt tgaaaacggg ggcggattcg attgagttga acgaactctt
    10801 caagctcttc gtttaccgtc cgttgcctgt ggaaagggat catgtgaacc aagctgtcga
    10861 tgcggtaatg acaccgtgtt tgcagacttt gaacatgacg ctggcggagt ttgacgctca
    10921 ggcgaaaaaa cagcagcaat cttgagtatt tttgaaactg tatttttatc ctaaagacat
    10981 tttcctatct gctgattcca ccgtttcctt tctgtgtgcc gccataattt ttatgataga
    11041 caagccattc aagtttgcat tgactgcttt ttcattggca atatccaaat ggctggtcgc
    11101 tgcatctaaa aataggattt tcggttcgca atataaggcc cgcgccaata cgatgcgttg
    11161 tttttgtccg cctgacagtg cgctgccata tcgccgatca aggtttcata gcccataggc
    11221 atggcgcaga tttcttcgtg aatcatagca aggcaggcgc aatgttcgat ttttcctcta
    11281 tccggttccg tatcgaaaaa acaaggggct gtactagatt agccctaaat cccacaccaa
    11341 tcccgcagga ttttaagctg ttgagacggt gtgccgaagt taaatcgaaa ttcgcattct
    11401 ttcaagaaca gcgggaaaga tttgcaatcg attccgttgt attttcgcaa gacacgttta
    11461 gtctagagtc tgtatattac atttattttt agggtctgct agccaatttc ttgttccctt
    11521 cattatttta tcttctgaaa gaaaattatt tttttccatg ctattaatat taatgatatg
    11581 atttttattt aaaataattt ttccatataa aatttccggt ttgtaatagc aagagtctga
    11641 agcaaatcct tgcccgtcaa tataagaaaa ataaatgtta tcatcctcct tataatattc
    11701 taaaaccaat ccggatatta ttttatcaaa attcccttca gttccatctt tcatgactaa
    11761 aatataatta gcaggccaac ctttatcgta aacatattca aactgatagt tcccgaaact
    11821 ctcgatatcc gaactaaaaa agaagaaaag caaattaata gccaatacaa aaacaaataa
    11881 gaacaaaaat agcaaaattt tcaacttagt taacaatatt tacctctcct ttaaattcaa
    11941 tcctgaaagg taccccttac cctgggctac caattatagt ttccatattt ctaaatattg
    12001 tttttacatt acttttttct ccccccaaag gaattcattt taaaatcatg cttttcaggt
    12061 gctaatcgat acttaccatt aacatcttta atcacagata tatttccatg tatagcccaa
    12121 cgtgaaaaat ctgagtatta tatacagtta taccttactg aaacaaagct agctgtacat
    12181 atctgtacca tatttttact acaaacaaaa aatatttata attattaagg ataagataaa
    12241 aacccccaac gccagattaa ttcttaataa tttcaaataa aaaatatttg agattttttc
    12301 ttttccaaat aatatattga aatatttaaa gttaaggtag cttgatttaa gtagaaaatc
    12361 aaaaaaacca ttaattaatt tttcttcttt aaatatttta tatgatatta taaaattaaa
    12421 taacattgcg aaaacatatg aaatcatcaa aataccaaat atatagtggg aatgcattat
    12481 tatttagctc cttcttttgg ctctgacaaa ttgacagtcc attgatatcc aatgcttgca
    12541 tttgcaattg ctgacgcacc tgcccctgtt ttccctgtta gtatcaatgg ttcttttctt
    12601 gcaagatgtg cacctgcaca accacctaat actaaaccac cacctattgt aaatccttcc
    12661 tgttgtatct ctaatgataa cattttcttc ttgtgccgcc cttaatacag attgtggaat
    12721 tggattgacc tgagcaggaa cttctaaaat aagttttcct tcaagctgtc ttcctcttag
    12781 cagattaggt gtacttggaa cattggaaat gacaaagtga gtgcgcaaag ccacctgaag
    12841 gcgatgtgtt tgaacctgtt gaaagcggcc aacaggctaa atgcgcccgc tgccgcctaa
    12901 aaggcagccc ggatgcctga ttatcgggtg tccgaggagg attaaggggg tatttgggta
    12961 aaattaggag gtatttggta cgaaaacagc cgaaatcctg tgtttgggtt tcggatgtcg
    13021 gggaagggct tttttgcaaa ggtctcaact catgttattg caaagatctc atgccttgtt
    13081 ttgccagcag gttgagttct tctccggcaa tcagcgtggt aaagccccgc cacaacacag
    13141 atctatgtac tgtggaaggg cttcaattta tagctttcaa aaatctttca gctttaagac
    13201 ggcctaaagt tgtaatctat aaaacaggag ctcagagttt tacggctcac tctcgcttcg
    13261 cgttaccaaa taccagctta tcggttttga acgtatagta atctatccaa tcctgcagat
    13321 attcatacgg gtaagacaag tcatactgtt tcataaaatc gaagatgtct tgatattcgt
    13381 ctgccggcag cggatcgtaa acaatcaaat ccctcggtgc gatttcttga tctatgccca
    13441 aatcgaaacc gtgcatggat gcgattttgg cgtaggtaac gatttgcggc tgcaggtaga
    13501 aatcgaaata ggacaatgtt tctttggcag ccatacgcgc ggttttttta tcgaaaagcg
    13561 gctctaaggc ggccttcatc gcctcggcat cctgttcggc gaaagcgagg aagaagcggt
    13621 aatcgtacaa ccgcttttgc agccatttgc taggggtggg atgcgccaag actttctcgc
    13681 tacgttgttt caaccgatca agctgcttac cctccaccat cagcagagta ttgtaaatca
    13741 tatgacggtt gaggtcgtat cggtttacga aggcttctgt atcgttggcg atgttgtcga
    13801 tattgcgcac caaaaactcg cgcagctgcg ggctgtcgct catcagcatc agaaacatcg
    13861 gatcttgaat gttgagcatg tcgcagggaa agaagaaggg ttcggggtct tcatcatcta
    13921 cactctgcaa aatacccaac tttcctgcaa cataagcata ttgcttgaat ttcttaagat
    13981 catgttcaaa tagataggca tgggaagccg cagcttcagt gtacattaaa atgtatttca
    14041 tcgctgcaag cggaacgcct tttctttcat ctacataatc tatagattcg gggcaaccgc
    14101 tattgaaatt agcagtattg cctatgatta cattagtaat atgttcatac catttttggg
    14161 tggtcatcat attgtgcccc attgttatct ccttatattg gttttagaag gaactttgac
    14221 agaaagaata acggccttac ctgtttgacg atcaacgcct gctattgccg tttttaattt
    14281 gccgttctga tttgctttta agacaactgc cttagcagga ctaccatcag gtaaactttt
    14341 tacaacttgt ttaatccatt cacgactcat ctgcgtatat ccacccgcac cattcggatt
    14401 cagctgtacc gtaccgttcc taatctgctt actttctaca atcaaaacaa cactaccatc
    14461 ggcagcctgc catacatgat caaaaccgtt atttccgccg tatttgccgc ccgaaagcac
    14521 tctgaagcca ttttgtttag ctaaagagtc aaataactgc tcggtcattt tacctgtcgt
    14581 gtcccttcct tcgccaatag ctttcagcaa ttgtttgtca gttgctgcag taacccttaa
    14641 ttcaatttga ccgattttga ttttggtttt actgacatag ccctgtgcag tggcaacggt
    14701 tgctgccttg tccaaggctt ttttcatgcc ttgtaaattt tttgccgctt tcgctacttt
    14761 ataggcctgt atcgattcac cgatacccgg aaccacaccc agcaaagcaa acaggtgatc
    14821 ggcagcggtc tgtgcttgta caaaactctg tatatcaccg ataattggaa taaatcctgt
    14881 ctgaagaagc aaaacttctc gatattcttc aggattttca cgtatccatt tttgttgttc
    14941 cttttgaaat tcatcacact ttgcaccaac gcatctagga tacaaagtat tattctccac
    15001 cgctatctgt gccgcattcg ccgctgtatt cacatccccg cctacaacgg cagacgcagt
    15061 gccggcaacc agttttgaat aggcagtaat cttcgcttta gattttttga tttcggtcgc
    15121 actcatacga ctgaaatcag tattcttaac caaagcctca ccaacaatct caccgactgc
    15181 agcgcctatc gcgccatcct gacacttgcc cttattcgcc gccgctgccg cacagcccgc
    15241 tatggcatgg gcaatcttgt gggtggtata tcgctgccag ccctctctgt tgataatctt
    15301 gcgtatgatt acgccgtttg atggctaatc gtacctacgc aggcttaaaa tttccatcaa
    15361 tccatatcat ttgagttttc atcttcataa tatggatgat caaacaaatc tccttcccaa
    15421 atacattcac tcgttatacc ttgggattcc atgaaaggaa cataagaata aaaatctttt
    15481 tcatattctc cataaaatat attcatacct ttgagccata ctgcatcgca ttcatcacac
    15541 agaataattt catcatgaag atatttaggt ttcgaatggt agagatagcc ttgttgacaa
    15601 gcaggacaca ttttcattct cttattcatg attactccat ataatcgatt tatttttgtg
    15661 ggtaagcagt agtgatttga ttgctgcctt tagtctgtac aacaatacgt atatagcaat
    15721 ctgataattt cctggttttt atcagcttta tcctcagatt ccaaacccaa taataaaagc
    15781 cgtttgaaat ttttttcaga cggccttaaa acttaattaa ataatgtccg gatttaacac
    15841 caaatcatat tcgccaaact ttggaaatag aattacctta tctttttggg aatataattc
    15901 tgttttttca tatcgctcat tattaataaa atcctctttc aaaacatagc aatcatccgt
    15961 attttcattg aagaaataag tatatccttc tgctaagtca tgagagtcta aagttatata
    16021 atctctccat acagccatag aaagaaaata ataattcgaa ttggaatatt tttgaaattg
    16081 atgggttaaa taatcccttc caaatttatc gaaaaaatct accgaaaaaa aacctacttc
    16141 ctctcgcaag gtaattacat attcaggttg tgtcgccgaa cctattacgg cactatataa
    16201 ttccccttta atatgttttt cttcagcttg tttctcagaa aaaggcttat gaagtctctt
    16261 ataaccataa gaccactgct cacaataaaa aatatctttc ttcatttgta aatccttcct
    16321 gttgtatctc taatgataac attttcttct tgtgccgccc ttaatacaga ttgtggaatt
    16381 ggattgacct gagcaggaac ttctaaaata agttttcctg taagttttct tcctcttagc
    16441 gaagcaggtg tacttggaac attggaaatg acagcaccag ggctatattt tctaacagcc
    16501 tccttgatat aaccaatccc cgtactttct tggatttgag aaaattgggt aaattttctt
    16561 gaaataattt cccttgttgc aggattatac gaatctaccc taaaatgtcc cgttaccgat
    16621 ttaggattgg ctacataaag ctcattataa gggtattttg atgacatgat acggttaaat
    16681 tcattgccgt tgtttatcct cattctataa attgggagaa caggaatgcc tctggattcc
    16741 cttaattgat tataatattg cctgtatgtt tgtacatcat gtcttgtcca cggctctcta
    16801 ggattcctca taatagcaat cccgttaaat ttcggatcca gccttcggat ttgattggta
    16861 atggcctgga tttcaagaat ggcatattca tgttccaatt cttgtcgcgg agtccaacgt
    16921 atatttaccc tcctgcgagc taaaagacta ttattctcca ctgccacagt agccgcattc
    16981 gccgccgtat tcacatcccc tttaaccaat gccactgcgc tgcctgcgat aatctgcgag
    17041 taggctatga ctttttggcg ttcttggggt gacagtttgc ctacatcgcg tccgtccaac
    17101 agggtttctc ccaccatctc gccgactgcc gcgccgattg cgccgtcccg acatttgcct
    17161 ttatttgcta ccgctgccgc acagcccgct atggcatggg caatcttgtg ggcaatgtag
    17221 tcttcgctga gattaaattt gattttgctc gctacttctc cgtgtacggt actgactatc
    17281 gcacccagtg cggcatcgcc caagttgtct tttaggctgc cgccgttgat ggcggtatgg
    17341 acacttgcgg cagcggtgct gttgatcagg ttagcggtca gtttgcctgc tgcgggactg
    17401 tgaaaatgtt tgctgacggc ttcggctgct tgggtgttca gcccgcttat gccctgcagt
    17461 acgcctgcgg ttacggcggc ggtggcggcc tgtctgacgg tgctgctttt gcccagttct
    17521 ttcagggtat ggtttatgtc tcctttgttg ttgatgaggg aaactgcggc ttggctggcg
    17581 agactggcca gtgcggcttt gcctgcggct gtggtgatag ctgcagctga tgtgcctgct
    17641 gctactccgg ttgtggctgc cgttcctgct gctactccag ttccggctgc cgttcctgct
    17701 gcggctcctc ccgctcctgc gcctgccgcg cccgccgttc cggcggctgc cggggcggac
    17761 agtgcaccgt aggtcaatac ggttacgacg ataacgacga cagctgctgc tgcgggtgtc
    17821 atgccctcct gtttgtagtc ccatttatcg taagcaagct gcacctgatt ccagttgatg
    17881 tttttcgcaa cttgaagttg tttcaaataa gcatactcgg gctgcttggt gagggtttcg
    17941 atttgggttt tcagattgcc tttcggaatg tcgacaatgt aaccgccggg agcagagagt
    18001 acgggcgcaa cggggccggt gaaacttggc agttgcaggg tttcgatgtt gctgccgcgt
    18061 cctgcctgtt tttgccagag ggcggatttg ctgctgctta cggtttctgt gtggatgctg
    18121 cttttgatcc cttcgaggat aatcttggca tcggcccgtg cctggtcgcc tacgcctgca
    18181 cggatgaccg cgccgcccag cgtggtttca aactgcgtac cttgtaactt ggtatcccaa
    18241 cctgattgca gattagctga ttcagccact acacggcttg gtaaggcagt ttgcatctgt
    18301 tgggtagagg tatcatgtac cttatcataa gtaatgccga gaaatttgcg tttcttatga
    18361 ctgtctagtt tgtcgtagtt gagctcttct acggcataga gtgtcaattt ccgcccggct
    18421 tcgatgttaa tgctgccttt gggggcatcg aatacggtgg cgtaggcgtc gatgctgcca
    18481 ccagatttga tgtcgat
//
LOCUS       DAXHKG010000031        18445 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.031, whole genome shotgun sequence.
ACCESSION   DAXHKG010000031 DAXHKG010000000
VERSION     DAXHKG010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18445
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.031"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(287..4456)
                     /locus_tag="ACFMWP_000798"
     CDS             complement(287..4456)
                     /locus_tag="ACFMWP_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HFC5891431.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRINPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTLWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNINRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGRRSSGGELTYTIRFDRFSGSD
                     KKDSAGNGKGK"
     gene            complement(4511..6358)
                     /locus_tag="ACFMWP_000799"
     CDS             complement(4511..6358)
                     /locus_tag="ACFMWP_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HFC5891432.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLHSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGAFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNANVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6770..7999
                     /gene="sstT"
                     /locus_tag="ACFMWP_000800"
     CDS             6770..7999
                     /gene="sstT"
                     /locus_tag="ACFMWP_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HFC5891433.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAYTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8111..9604
                     /locus_tag="ACFMWP_000801"
     CDS             8111..9604
                     /locus_tag="ACFMWP_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC5891434.1"
                     /translation="MFKRSVIAMACIVALSACGGGGGGSPDVKSADTLSKPAAPVVTE
                     DVGEEVLPKEKKDEEAVSGAPQADTQDATAGKGGQDMAAVSAENTGNGGAATTDNPEN
                     KDEGPQNDMPQNAADTDSSTPNHTPAPNMPTRDMGNQAPDAGESAQPANQPDMANAAD
                     GMQGDDPSAGENAGNTADQAANQAENNQVGGSQNPASSTNPNATNGGSDFGRINVANG
                     IKLDSGSENVTLTHCKDKVCDRDFLDEEAPPKSEFEKLSDEEKINKYKKDEQRENFVG
                     LVADRVEKNGTNKYVIIYKDKSASSSSARFRRSARSRRSLPAEMPLIPVNQADTLIVD
                     GEAVSLTGHSGNIFAPEGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGE
                     VLHFHMENGRPSPSGGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAVIDGNGFKGT
                     WTENGGGDVSGRFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9680..9895)
                     /locus_tag="ACFMWP_000802"
     CDS             complement(9680..9895)
                     /locus_tag="ACFMWP_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891435.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9888..10103)
                     /locus_tag="ACFMWP_000803"
     CDS             complement(9888..10103)
                     /locus_tag="ACFMWP_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HFC5891436.1"
                     /translation="MKEYKVVIYQESQLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(10178..11521)
                     /gene="argG"
                     /locus_tag="ACFMWP_000804"
     CDS             complement(10178..11521)
                     /gene="argG"
                     /locus_tag="ACFMWP_000804"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HFC5891437.1"
                     /translation="MSQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVSPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKK"
     gene            11646..12446
                     /locus_tag="ACFMWP_000805"
     CDS             11646..12446
                     /locus_tag="ACFMWP_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HFC5891438.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAGFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYAGRFNQTQRGSRSVYVFEQPESRITPIMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12486..13472
                     /locus_tag="ACFMWP_000806"
     CDS             12486..13472
                     /locus_tag="ACFMWP_000806"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HFC5891439.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDMMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPDIPVYLVAEDMCASG
                     CYYIAAAADKIYADSSSIVGSIGVIGSSFDATELMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKAGVREALQAVR"
     gene            14130..14392
                     /locus_tag="ACFMWP_000807"
                     /pseudo
     CDS             14130..14392
                     /locus_tag="ACFMWP_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14430..14804)
                     /locus_tag="ACFMWP_000808"
                     /pseudo
     CDS             complement(14430..14804)
                     /locus_tag="ACFMWP_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(14801..14929)
                     /locus_tag="ACFMWP_000809"
     CDS             complement(14801..14929)
                     /locus_tag="ACFMWP_000809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891440.1"
                     /translation="MPQTWGEAIQFRIKKQIENELAPPNWSTQFPNGSIYDPKVTK"
     gene            complement(14977..15333)
                     /locus_tag="ACFMWP_000810"
     CDS             complement(14977..15333)
                     /locus_tag="ACFMWP_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HFC5891441.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(15395..15511)
                     /locus_tag="ACFMWP_000811"
                     /pseudo
     CDS             complement(15395..15511)
                     /locus_tag="ACFMWP_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(15598..15810)
                     /locus_tag="ACFMWP_000812"
     CDS             complement(15598..15810)
                     /locus_tag="ACFMWP_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891442.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(15886..16245)
                     /locus_tag="ACFMWP_000813"
     CDS             complement(15886..16245)
                     /locus_tag="ACFMWP_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC5891443.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(16242..16460)
                     /locus_tag="ACFMWP_000814"
     CDS             complement(16242..16460)
                     /locus_tag="ACFMWP_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891444.1"
                     /translation="MMTESHGYLSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYCWLGFDELPQSEKIKFLSYLNIL"
     gene            complement(16481..16687)
                     /locus_tag="ACFMWP_000815"
     CDS             complement(16481..16687)
                     /locus_tag="ACFMWP_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPCC family cysteine-rich protein"
                     /protein_id="HFC5891445.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKDLPIR"
     gene            complement(16653..17093)
                     /locus_tag="ACFMWP_000816"
     CDS             complement(16653..17093)
                     /locus_tag="ACFMWP_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB"
                     /protein_id="HFC5891446.1"
                     /translation="MAGGNKPPKPSTQQHPTHSDNNIGLPASYVKPDTSISPTGTIQD
                     RIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHR
                     RVRYDINNNIYVLANPKTFKIKTMFKPNLGKKYYDGEFKKDMGN"
     gene            complement(17213..17557)
                     /locus_tag="ACFMWP_000817"
     CDS             complement(17213..17557)
                     /locus_tag="ACFMWP_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891447.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(17595..17918)
                     /locus_tag="ACFMWP_000818"
     CDS             complement(17595..17918)
                     /locus_tag="ACFMWP_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891448.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYEAFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(17921..18205)
                     /locus_tag="ACFMWP_000819"
     CDS             complement(17921..18205)
                     /locus_tag="ACFMWP_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891449.1"
                     /translation="MAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQGKT
                     PARIPPMSDTKNGWLAKDGWVKRVQNVNKIEIHYIENTRTGEKTDFKFKD"
     gene            complement(18188..18445)
                     /locus_tag="ACFMWP_000820"
                     /pseudo
     CDS             complement(18188..18445)
                     /locus_tag="ACFMWP_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT         4275 a         4385 c         4906 g         4879 t
ORIGIN      
        1 acctgtgtat cgctgtaaat cttagagatg gcggaatata gcggattaac aaaaaccggt
       61 acggcgttgc ctcgccttgg ctcaaagaga acgattctct aaggtgctca agcaccgagt
      121 gaatcggttc cgtactattt gtactgtctg cggcttcgtc gccttatcct gatttttgtt
      181 aattcactat atcgattctg ttcccttgca ggcggacggc ggcggcggac ggtggaaaag
      241 caggttttca aatgtccggt ttggcggcgc gccgtctgaa aaccgcttat tttcctttgc
      301 cgtttccggc ggagtctttt ttgtccgaac cggagaagcg gtcgaaacgt atggtgtatg
      361 tcagctcgcc gcccgacgaa cgtctgccga tacgggcaac cgcctgtatg gcgcgggtca
      421 gccggtaaat cagtttgacg gactgttccg cgctggagat gctgtattcg tagccgatgt
      481 agagtttgcc ggtcagttgt ttgccgacgg tcagcacctg ttcggcgggg ttgagttcgc
      541 cggtttgcgc gttgcggctg cgcttgctgg taaagcccaa atcatccacc agcccgatgc
      601 ggtcgttgat ttgcccggca agcagcgcgc ctgcggctgc ggacagggcg gcattgtcgc
      661 cgctgctgcc actgccggcg cggttgagga tgagccagga gagcttgtct ttttcactca
      721 tcggttcgtt tgccgtcagc gtaatgcgcg gactgttgag gctgcccaat atttccacgc
      781 ccgcaccgac gggggaaagg cggcgttcgg cgcggatgtt gaggttgggg tcgttgagcg
      841 ggccgacaaa ggagaccgtg cctttggtaa tgtccaaatc ctgcccgtat gccttataac
      901 gccctttgat gacgcggacc gtgcccacgc cccgcacgct tccgcccgat tgggcggtca
      961 gggtcagttt gccgcctatg gtaacgtccg cgccgtagcc ggcgaagcgg atgccgtcat
     1021 tgaggtctaa agtcaggttc atattgacgg ggagcggtgc cgccgcctct tttttaactt
     1081 cgcctaatac gacgacatcg tcgccgacgg acggcatcga ggatttttgc gaaccgaaca
     1141 gcccctgatc cgttttaatc atcccggtaa cggatatgcc tttttgcggc gaatagcgca
     1201 ggcgggtgtt gccggaaacc gtcaggcggc ggttagggcg ggacaggatg cggtatttgt
     1261 cgaacaccgc gccgatatcg acatcgggtc cgctgttttc cataccgacc gtgccggaga
     1321 gttccgccgt tccttcgtgc cggaatttca ggctgtcgat tacccatttt ctgcccgcga
     1381 tatgcgaacg cagcgagccg ttgtccaaga tgatgccttg ggtttggttg cggtaataga
     1441 gcttgtcgcc gttgatgctg ccgcccaagt gcgggtcggc gatgctgccg ccgagggtta
     1501 cggcggcatt caggctgcct ttgacggttt gtccgacggg caggaagttg cggaatactt
     1561 cggcatcggc aacggtcagg ttgagcctgc cgcccaaagg cgcggtatcg aaagagcggc
     1621 tttgcccgac ggtgatgttg ccgttgattt tcccgtagtt gctgctgccg ttgacggcgg
     1681 cattgacgga cggagagccg acccgtccgc cgatttgcgc ggcggcattc aggctgccgg
     1741 taatgttttg cgcggcggcg ggcagaaagg gcttcaatgt gcccaagtcg ggaagggagg
     1801 cggtaatcct gccgccgagc ggtgcatttg ccatattgcc gccgaaggcg ttgccgatgt
     1861 ccaaatcggc gttaatccgc ccgaaacgtg cgccgccgtc aagcaggatt ccgatacggt
     1921 cgttttgaaa gcgcgttttc agggaaaatg cgttcaaacc caaagcctgc ccgccgggca
     1981 atacggcatc gccgctttgc cgattgatat tgaggtagcc gcgcgcgttg cgcccgtagg
     2041 cgacatccca gtcgccgttt aaaaccagat tgtgttcgaa gggcggtttg aagaaattgt
     2101 gcaactcggc gatatgcaga cctcgtgcgc cgccttttgc cgatatgccg gttttcctgt
     2161 cccaggaaaa gtgttgcagg ttgaggctgc cgcccatagc ctgccaattt gccgcacttg
     2221 ccgccacacg ttccgcaccg gcttcgagcg tcatacggtt ttgcagtttt aggttgaatg
     2281 cgccgccgat gtcgaggatg ccgatgctgc ccttccatag ggtaagttcc ctgttgatgc
     2341 cgcctgaagc gtccaaatcg aatttgaacg gtttgccatc cagcgtcatg gcggcgtgtg
     2401 tgcggatgcg gtgctgcacg cccgtgccgt ccagcatcag gtcggcggta tcgacaaccg
     2461 ccgctccgcc cgacagcgaa aggcggctgc ctttgatgtc ggcgcgtatc gggcggcttg
     2521 tgtcgggcga acctttgagc gtgaaatcga gcgaacggat gtctgccgcc ttgccgatgt
     2581 gcaggttgcg cgccgcgccg gaaaggtcgg tttcaaaggt tcggatgccg ccgtccaaat
     2641 cgccggaaag gtgtccgcgt acatttaaag accccgcgag tccgaaaccg aaacgggata
     2701 aatcgggtgc ggtgatgttg aggttgagcc ggtcgccttt tttgccgaag ccgccgtctg
     2761 ttttaataat gttccgcccc agccgcaaat cgacggcggc acgcggaagg tggcgggact
     2821 cgtaaacaat gtcggcactg ccggcaatcg gtacgccgtt gaacgtgccg ggtaaaaacc
     2881 gcattttgcc tgtgaatttc tcttttgcca gttcgccggc aaggtttatt gagccgttga
     2941 tattgcctgc cggaagttgc ggattgatgc gcgaagggtc gaatgcgcgg gaacggatgt
     3001 ccagcttgag caggcggtct ttaaacagct cgagatagcc ttgcgcggtc aggctgcctt
     3061 gcccggcggc gatgttgacg gtgtcgagca ccagtttccg ctgtccgttt gcggggtcgc
     3121 ttgcaatggc gaggctgccg tccgtgcgcg ccgtgccgat gccgagttgc caagagattt
     3181 tgggcgaggc ggtcgtgcca ccgatgccga tgctgccgtc caacctgcct ttgaacgcgg
     3241 tttgcagtac gtcttccgcg ccgacggagt tgatgcctat atttaaatcg aggatgtctt
     3301 tttcggtgtc gattttgccc gacagcctga tgccgccccg tccgagcagg gcggcggacg
     3361 tattgccgat atgcaccgtg ccgtcctgcc ggatgacaaa gccgcctaaa acctgacgga
     3421 cggggatgcc gttgcggtcg gcaaagccgg ctttggtgtt ttccaaatcg agcgaacctt
     3481 ccagcgcgat gccgtctgaa aacgacggga tggcggtcag gtcgaaattc agcccggcat
     3541 cgggcaggga gggcacgaag gcggccgggt tgatgttgaa ccctttgacc agcacttctt
     3601 ccaatgtttt atccaatgat tcggcaaacg ggtggatgac ggattttccc gagaggcgga
     3661 tattgccgcc gtcgatcgcc agttcggcgc gcacatcctt caggctgccg ctcagccgag
     3721 ccgtactgtg tatggttttg ccttcgagtc cgcctttggt gtaaatggcg gtatcgaggg
     3781 caaacggttt tttcaagccg accgaggctg accccgacga actgctccac ggcgtgtcgg
     3841 cagccttcag gtcgaggcgg tgtcctttgc ggtcgtaacg gtatgaagca tccagccgtt
     3901 cgagatagac ggtttgtttg tcaaaggctt tgcccatgct gattttgccc gtctcgaagc
     3961 ggtcgagata gacggcggca ggcaggtcta tgctgtcggg aaggctgagc ggcgggcgtt
     4021 cttctttagg cggagtcggt ttggtaacga tggcgatgtc gccggcggaa atttcggtaa
     4081 tgtgcaggct gcggcgcatc agttcggacg gtttccacgc gaagcggaag cggctgattt
     4141 taaggtctgc cccctcggtt tctatcgacc agttgtcgcc gtcgaagccg tcgagcagcg
     4201 tgcctttgag gttttgggag gaaatgttta cgccgaacca agacgggatt tggtacagcc
     4261 cgaagcgcaa acccgcttcc gtgccggcga gccagccgag gaaacatact gccaaaatca
     4321 gaacagacag cagtgccgcc gacagcttca gcagcgggcg gcgttttttt gccggcgggg
     4381 tagggcggtg ttcagacggc attttgcgcg tgccgttttc ggtcggatcg gtatctgtcg
     4441 gtgcggtatc ggtcataatg tctgtttcaa aatggtttgc tgcaatgccg tctgaagcgg
     4501 ccgtatcggt ttagaagcgc gttcccaagc tgatgtgcca gcggattttc ttgtcgctgt
     4561 gcccgtaggc gatgtcgaag gaaaacggcg cgagcgggct gaaccagcgc acgcccagtc
     4621 ccgaaccgtg tttcagcttc atacgtttga aattggcggc ggcgtcgccc atatcgtgga
     4681 acaccgcgcc ggaaagggtg cgcgtaaacg gcagttggta ttccaggctg cccaccaaga
     4741 gggcgcgttc gggcaggacc gatccgttcg ggccggcaag cccgatgctg tcgagttcgt
     4801 aaccgcgcac ggaagacgcg ccgccgctgc ggaacatcag ccctgaagga acgttggcat
     4861 tgtcgcgggc aacggtgtaa cccgcttgtc cgcgtatgat gaacgtgccg agttttttgt
     4921 tttcgggcgt gaagaaataa cctgcgcggg cagaggtgcg gatcagcgcg gtggaggaca
     4981 ggaatgcgcc caaagtcgta ccgattttgc cgtcgaggta atggccgttt tcgggatgca
     5041 gcacgttgtt gagcagctgg cgtttccaag aggcggtcag catcgtggcg tggctgttgc
     5101 ccaaatcgat atccgagccg gggattttcc ggccttctgc gagaaactcc gcccccagcc
     5161 tggcatcgat gcccgcgcgg tcgcgcacat accagatgcc gccggagaag gcgcgttttt
     5221 cgaggttttg ggtggtcgaa cggttgtagg aaacgttgct tgtccagtag ttgccccgat
     5281 agttgcgcgg ctggctgatg ccggcggcaa gcgtggtttc gtatttgtcc atatcccaga
     5341 cgaccgaacc gatatagcct ttgttgaaga ggttgtaata gtcgtaggcg attttgccgc
     5401 ccaaaccgta ttccgaatcg aggcggatgc cggtttcgag cttgtggcgt ttgacctcgg
     5461 ttacgctgac tttgacgggg acgcggtcgc cttggaggcg gtcgaagtcg gcttgtacgg
     5521 acgcgccgga ataatgcccg ttttgttcga gcgcctgttg gaagtcgagc agcaggtcga
     5581 ggtcgtaggg cgtgcccggt tggaagcgcg ccaagccgga gacgatttgt tcggggtaac
     5641 gctgcgtgcc ggtaatttca aagtcgccga aggcgatggg gcggccgctg tccacgacga
     5701 cgttcaaatc ggcggtggcg gtatcggggt tgacggccgc ccgggtgttg ccgagcttgg
     5761 caagcgggta ggctttgcgc gttaccgcgc cgaggacgga agttttgctg ttttcccaac
     5821 tgtcctgatc gaaatcactg cctaccggct gctgccagtt ttccagcgcg ttgcggtagt
     5881 attcggcgag gttgccgtct gaaaggatgt cgccgaggat ggcgacgccg acgttggcga
     5941 ttttggtgcg cgggcccggt gtgatgtgta ccgtataagc tccgtctttt tccgtcaggc
     6001 tgactttgct gctgaaatag cctttgctgt ggagcattgt tttaacgttg tccggtgctt
     6061 cttcggcgag gaagcccgtc tgttccttgt ccaatacttc ttcctgctgc tgcgtgatga
     6121 gcggcaggtg ttcttcgacc atatctttga tttcactatc ctgcgtgtcg atgcggacgg
     6181 ggaatttggg ttttaattta actgattcgg tgtcggggct tttgtttttg aacaatgcga
     6241 aacccgccgc cttgttttcg gaaaggtcgg cggcaggcgc gtatgcgtgc ggaaagaaaa
     6301 ataaagccgg caggagcagg gcggtcggtt taatcatcat ggtacgggtg tcgtgcatcg
     6361 gtgtggcggt tttcgattct aacactgttc ggacagggtt tcgaacggcc gtttttgtgt
     6421 tgttcgtacg gggcgggacg cttcagacgg catactgccg ccggtatttc ggaggttgcg
     6481 gcccgccgga aatgtatctg cttgttttaa ggtattttgt ttctaatccg catatggaaa
     6541 acaggctgcg tttcggaata gtgccggaaa ataggcagga ttaaataaat ttattttcgt
     6601 tcaataaatt aaaccgttgc gccgaatgat aaagcaaagc ctgtccggca ctgcataggg
     6661 caaatcaacg caaccttaaa acacagccga aaaataaaaa aaaacacaga gaatgagttt
     6721 tcttttaaaa tacaacattt tttaacatat cacaacataa ggaagaatta tggcgttcgg
     6781 caaatcctta tttcatgcga tcggccgcgt cagcctggtc aggcagattg ccgccggttt
     6841 ggcgttgggc atcgtaatcg gttcggtttc cccgcaactg ggcttggcgg caggcttgtt
     6901 cggcagcctg tttgtcggcg cgctcaaagc ggtcgcgccg gttttggtat ttattttggt
     6961 ggcggccaca atcgcgcagc accaaaaagg caacaaggcg catatcaggc cgattatcgt
     7021 cctttacctc atcggtacgt tttccgcagc cctgaccgcc gtcatcgccg gtatggtttt
     7081 cccgacgcac attgttttgg cgggcgcggg cgatgtgtcc gccgcgccgc cttccggcat
     7141 tgtggaagta ttgaaatcgc tgctgatgaa cctggtcgcc aacccgatta acgcgattgc
     7201 caatgccaac tatatcggca ttttggcttg ggctttggtt ttgggcgcgg cgttgcggaa
     7261 tcacggttcg gacgttacgc ggcaggtcgt tgccgatttg gcggaagcgg tttccaccgt
     7321 cgtgaaatgg attatccgtt ttgccccttt gggcattttc gggctggtgt cgtccacaat
     7381 cgcggagacg ggtttcggcg cgctggcggg ttatgcgaag ctgcttgcgg tactgttggg
     7441 ctgtatggcg tttatcgcgc tggtggtcaa tcccgccatc gtgtggtgga aaatccgccg
     7501 caacccttat ccgctggtgt ttacctgcct gcgcgaaagc ggcgtgtatg ccttctttac
     7561 ccgttcttcc gccgccaata tccccgtgaa tatggctttg gcgaaaaaac tggggctgca
     7621 cgaagacact tattcgattt ccatcccgtt gggggcgacc gtcaatatgg gcggcgcggc
     7681 gattacgatt accgttttgg ctatggcggc ggcgtacacc caaggcatac aggttgattt
     7741 tgccaccgcg ctgctgttga gcctggtggc gacggtcagc gcgtgcggcg cgtccggtgt
     7801 ggcgggcggt tcgctgctgc tgattccgct ggcgtgcagc ctgttcggca tcagcaacga
     7861 tgtcgctatg caggtggtcg ccgtcggctt tatcatcggc gtgattcagg attcggcgga
     7921 aacggcgttg aattcttcaa ccgatgtttt gtttaccgcc gccgccgatt tgggcagaca
     7981 gagaaaccgg gcggaataaa ccaagctatg ccgtctgaag cccttttggc gttcagacgg
     8041 catattttta caattttatg ggcatatggc ggaaacaata ccggctgcct tgaatatgaa
     8101 ggagatgatg atgtttaaac gcagtgtgat tgcaatggct tgtattgttg ccctttcagc
     8161 ctgtgggggc ggcggtggcg gatcgcccga tgttaagtcg gcggacacgc tgtcaaaacc
     8221 tgccgcccct gttgttactg aagatgtcgg ggaagaggtg ctgccgaaag aaaagaaaga
     8281 tgaggaggcg gtgagtggtg cgccgcaagc cgatacgcag gacgcaaccg ccggaaaagg
     8341 cggtcaagat atggcggcag tttcggcaga aaatacaggc aatggcggtg cggcaacaac
     8401 ggataatccc gaaaataaag acgagggacc gcaaaatgat atgccgcaaa atgccgccga
     8461 tacagatagt tcgacaccga atcacacccc tgcaccgaat atgccaacca gagatatggg
     8521 aaaccaagca ccggatgccg gggaatcggc acaaccggca aaccaaccgg atatggcaaa
     8581 tgcggcggac ggaatgcagg gggacgatcc gtcggcaggg gaaaatgccg gcaatacggc
     8641 agatcaagct gcaaatcaag ctgaaaacaa tcaagtcggc ggctctcaaa atcctgcctc
     8701 ttcaaccaat cctaacgcca cgaatggcgg cagcgatttt ggaaggataa atgtagctaa
     8761 tggcatcaag cttgacagcg gttcggaaaa tgtaacgttg acacattgta aagacaaagt
     8821 atgcgataga gatttcttag atgaagaagc accaccaaaa tcagaatttg aaaaattaag
     8881 tgatgaagaa aaaattaata aatataaaaa agacgagcaa cgagagaatt ttgtcggttt
     8941 ggttgctgac agggtagaaa agaatggaac taacaaatat gtcatcattt ataaagacaa
     9001 gtccgcttca tcttcatctg cgcgattcag gcgttctgca cggtcgaggc ggtcgcttcc
     9061 ggccgagatg ccgctgattc ccgtcaatca ggcggatacg ctgattgtcg atggggaagc
     9121 ggtcagcctg acggggcatt ccggcaatat cttcgcgccc gaagggaatt accggtatct
     9181 gacttacggg gcggaaaaat tgtccggcgg atcgtatgcc ctcagtgtgc aaggcgaacc
     9241 ggcaaaaggc gaaatgcttg cgggcacggc cgtgtacaac ggcgaagtgc tgcatttcca
     9301 tatggaaaac ggccgtccgt ccccgtccgg aggcaggttt gccgcaaaag tcgatttcgg
     9361 cagcaaatct gtggacggca ttatcgacag cggcgatgat ttgcatatgg gtacgcaaaa
     9421 attcaaagcc gttatcgatg gaaacggctt taaggggact tggacggaaa atggcggcgg
     9481 ggatgtttcc ggaaggtttt acggcccggc cggcgaagaa gtggcgggaa aatacagcta
     9541 tcgcccgaca gatgcggaaa agggcggatt cggcgtgttt gccggcaaaa aagagcagga
     9601 ttgatgctga tgccgcctga agcgggggcg ttcagacggc attgtgatgt ttgggttgcg
     9661 ggtccggttc aagtccgcat cagttgataa acccgtcgtc tttcattttc ttttcggaaa
     9721 aatactggcc gaataccagc aaggcggcga ggatgatgac aaacagcccc gccatagtca
     9781 gtgtgatttt gaagaacaat tccgcttcga gaaaagaaaa ccaaagttgc acaatcagca
     9841 gcagcaccca gccggcaaac agtccgagac aggcataaac gccaagctta aacacggtcc
     9901 cgctccaaaa tgacgacgta ggcctcgcgt ttgaaaaaca acagcatacg gcgcaaatct
     9961 ttttccatcg ttacaacccg ccagccttcg ggggtttgtt tgttgaggaa cgcgctgaaa
    10021 ttgacggggt tgacctttgc cgcgccgaaa aacaggctgg acaactggct ttcctgataa
    10081 atgacgactt tgtattcttt cataggattc cttttaacat aagggatcat cttttcagac
    10141 gaccccttaa gttgctaatg atgcaaaaca gcaaacctta tttcttattg cccaactgcg
    10201 gtaataccga gccttcgccc agcgacagca aaccgctttg cgagtagatg cccagtttgg
    10261 cgcgggtgtc ggtgatgtcg aggttgcgca tcgtgagctg tccgatgcgg tcgagcgggg
    10321 taaacgccgc accttcgact ttttccatac tcaggcgttc gggttggtag gtcaggttgg
    10381 gcgattcggt gttcagaatc gagtagtcgt tgccgcgccg cagttcgagg gtaacttcgc
    10441 cggtaacggc tttggcgacc cagcgttggg cggtttcgcg caacatcaag gcttggctgt
    10501 cgaaccagcg gccttggtag agcaaacggc cgaggcgcag gccgttgatg cggtattgtt
    10561 cgatggtgtc ttcgttgtgg atgccggtca ccaagcgttc gtaggcgatg tggaacaacg
    10621 ccatacccgg ggcttcgtag atgccgcgcg atttggcttc gatgatgcgg ttttcgattt
    10681 ggtcgctcat acccaagccg tggcggccgc cgatgcggtt ggcttcgagg aagagttcga
    10741 cggggtcggc gtattctttg ccgttcagtg caaccggcac gccttcttca aagcgcacgc
    10801 tgacttcttc ggggctgact tcaacgtttt cgtcccaaaa ggcaacgccc ataatgggtt
    10861 tgacgatttt gatgcccgag ttcaaaaatt ccaagtcttt ggcttcgtgg gtcgcgccga
    10921 gcatattgga atcggtggag taggcttttt caaccgacat tttgtagttg aagccgttgg
    10981 caatcagaaa ttcgctcatt tcgtgacggc cgccgagttc gtcgataaat tgctggtcga
    11041 gccagggttt gtagattttc agcgcgggat tggtgagcaa accgtagcgg tagaaacgct
    11101 cgatgtcgtt gcctttgtag gtgctgccgt cgccccagat gtttacgtcg tcttctttca
    11161 ttgcggaaac aagcatcgtg ccggttacgg cgcggcccag aggcgtggtg ttgaaatagg
    11221 cgatgccgcc ggtggaaacg tggaacgcgc cgcattggat ggcggcgatg ccttcgtgtg
    11281 ccaactgcgc gcggcagtcg attaagcggg cgttttccgc accgtattcc atcgcttttt
    11341 tgggaatggc gttgtagtcg tcttcatcgg gctgaccgag gttggcagtg taggcataag
    11401 gcagtgcgcc tttgagtttc atccacaaca gcgcggcgga ggtatcaagt ccgccggaga
    11461 aggcgatgcc gactttctga ccgacgggga ggttttgtaa aatagtatgg ttttggctca
    11521 tgaaaaaatc ctcggtagct tgaaaaatca aagccattat cttataaata ggaaatattg
    11581 tcagccatca tgccgtctga acgggtattc cgccgtttca ggcggtattt aaaaccgaaa
    11641 acattatgaa tgcgttcaac ctcatcatca tcggcgacga aatcttacac ggcagccgcc
    11701 aagacaagca tttcgccttt ttcaaatccc tgctcgaatc caaagggctg aagctcaatc
    11761 aggtgcaata tctgcccgac gaacccgatt tgctggtcag gcaactgcgc cgcagctttt
    11821 cagacggcat accgacgttt gttaccggcg gcatcggcgc cacgcccgac gatcataccc
    11881 gccaagcggc cgccgccgct ttggagttgc ccgtcgtccg ccatcctgaa gccgccgggt
    11941 ttatcgaagg cataacccag aaacgcggcg agccgcttga ttcgccggaa cacgcccaac
    12001 gcctgaaaat ggcagatttc cccgaaggcg cggaattggt gcccaatccg tttaataata
    12061 tcgccggatt ttccattcgc gagcattatt tcttccctgg ttttcctgtg atggcgcacc
    12121 cgatggcgga atgggttttg gatacttatt acgccggccg cttcaaccaa acccaacgcg
    12181 gcagccgcag cgtgtatgtg ttcgagcagc ccgaatcgcg cattacgccg attatggagc
    12241 atatcgagca aacttatccc ggcgtgcgtt cgtacagcct gcccagcgtc ggttggacgc
    12301 attcagacgg cacgcaggtc aaaccgcaca ttgagttcgg catcaaagcc gaaggagaag
    12361 ccgtcaacct tttggacgcg gcgtgggcgg aagtgttgca cagcttggac ggattgggag
    12421 cagagctgaa aaatcgggta aactgaaaac cgtttgccca aatcggacga tatttaagga
    12481 aaaccatgca ataccgaatc agaagagaaa acgaagcacc cgaagcaaaa aatgcggggg
    12541 aaaccttatg ggagcgcgat atgatgcgcg aagtgctgtt gtccgcctat caggacaggc
    12601 gcagggagcg gatgtggaaa aacatctggc gcgccgtcag caccctgatt ctggttgccc
    12661 tgattgcagg cattttccaa aaagacgaag ccgcattgca gttggcgggc aacacgccgc
    12721 ataccgcagt cgtcaacctg tacggcgaaa tcggcaacgg tgtagaagac caggtcaaaa
    12781 aactcaaaga cggtatggag gccgcctaca aaaacccgca ggcaaaagcc atcgtcatcc
    12841 gcgccaacag ccccggcggt tcgcccgtcg tctccaacac cgcttttgaa gaaatacgcc
    12901 gtctgaaagc gcaacatccc gacattcccg tttatctcgt ggcggaggat atgtgtgcat
    12961 ccggctgcta ctatattgcg gcggcggcag acaaaattta tgcggactcg tccagcatcg
    13021 tcggcagcat cggcgttatc ggcagcagtt ttgatgctac tgaattaatg gaaaaaatcg
    13081 gcgtgaaacg cagggttaaa attgcaggca gcaacaaagg catgggcgat ccgttttcgc
    13141 ccgaaacgcc cgaacagtcg aaaatctggg aagaaatgct gaccggcata cacggcgagt
    13201 tcatcaaagc cgtcaaaacc ggacgcggcg gccgcctcaa attccgacaa tatcccgacg
    13261 tgttcagcgg tcgcgtgtac acaggcgcgg atgcgctgaa agtcgggctg gtggacggac
    13321 tcggcaatat ttacagcgtg gcgcgagacg tggtcaaagc ccccgatgtg gtggattaca
    13381 ctccgaagga cgatttcggc agaatcttgg gcagacgctt cggcgcagaa ctcaaagccg
    13441 gcgtgcgcga agccctgcag gccgtccggt agcgttgttt acagtatttc taagggaata
    13501 ccaaaataaa aatatacaca aaaacactca cctccccagt atgctgccac taagtcagcc
    13561 gcgtcactat ttaccgtgca cttaaagccg taaaaggcag gttgtccccg ggaggttttg
    13621 tgcatcctga taccgatcgg ttgttgttgc tcaaaggaca gaaggccgct gataaacgag
    13681 attacctgtt tgtcgctatt gacgattttt atactctgcc actttgccgg acaaaaccgc
    13741 agacagtgct gccaagtttc tgaccgaaca tctggccgac ccctgcttgt acctgattga
    13801 gtacgtttac tctgacaatg ataggtaata taaagagccg tccaacatgc tttcggtgca
    13861 gcttgttatg ataacgggat tggttggagg cttgcccgat ttgcttgtcc gcagaccaac
    13921 ggtaaggcgg agcgggttat ccgtaccttg atggagatgt ggcatgagga acagtcgttt
    13981 gacagtccgg aacatcggca aaaggagttg tgctgcttta ttaatttagg ggctgcccta
    14041 gatcactagg gaaattcaaa ttaagttaga attatcccta tgagagaaag tcgtctaagc
    14101 cggtaataaa caaaataaac tcattttgtt atcgtggcta tgatgtattg gatgcgggcg
    14161 aatttagcca tttccgtatc aatcacagca cacattttgc cgaacgacaa aaccatatta
    14221 atggaactga gaacttttgg aatcaagcaa aatgtcattt acgcaagttt aacggcattc
    14281 ccaaagcgca ttttgagctg tatttaaagg agtgcgaatg gcgttttaac aacagtgaaa
    14341 taaaagttct tgttccattt taaaacaatt agtaaaatcg agtttatcct agttgtccag
    14401 ggcagcctca tctctttata gatagctgct taccaagtat ccttaattgc taattcaagc
    14461 caatcttcaa aactattaaa aaattcatgg ttttctatat tatctaaatt aatgacaata
    14521 accctagaat ttcctgttac atcattacca tcaaaataag cttcccattc tccattacta
    14581 gcgaatggga taagatttaa atcaggcagg atagaatttc taaatatata agctacttct
    14641 gccccttctg ttccataatt ctcaaactac cagtgaaaat tatgtggctg aatataaggt
    14701 attaaagatg tatcgttaga gatacgaaca tacttttcag gataacaaaa cctttcagga
    14761 agcatattac taggatataa attaaattca ttttgaataa tcatttcgtt accttaggat
    14821 cataaatact accattagga aactgggtag accaatttgg tggtgctagt tcattttcaa
    14881 tttgtttttt aattctaaat tgaatagctt ctccccatgt ttgcggcatc taatgctgct
    14941 tgctctgcat caatattact aaaaattgga ttagtctcaa aaatgaaaaa ttactgtttt
    15001 ttcatttttt atagcatatt caagtacatg aataatattt ttcactaagg gctctgtaga
    15061 aaaatctgaa ttttgtaatt tttcttttac agccaaaata ctttccttat ctattagcca
    15121 atccccctca cttggtccaa ataaccaatt atcggtaatt tcagaaacaa gtctccataa
    15181 tccacgattt tgatattcaa taatttgact ttccgtaatt tctacaactg tttcagattg
    15241 aatgttttta taagcccaat caatcatttc agtatattca ctaattgaaa cattgtcttt
    15301 taaacagaaa attaacaggt tgtgttcatt catttgtcta agttcttaat atgagtttgt
    15361 tgttgtaaat aatcttttgc ttgcttacct tgtaaattaa aggattaacc gcaccttgga
    15421 tgatgccgcg aatatcatcc atacggttag cccaccaatt tttattgggg tcgttttccc
    15481 atatcagttt tcctgcttca tcagcacaat tagggttggc attgatgccc acccagttcc
    15541 agcctgaaaa ggatttttaa tatacggcaa aaggtgggca acaagtgccc accttaccta
    15601 gctaacattt atcccaagta tcatatattt ttttaagttc tttatccaaa gaaagaactt
    15661 tattttttca acaccatgaa ttatctcaaa atctctacaa tccacgcata cgcctgaata
    15721 aatttctcct acaattgctt gaataatata caactcatct ttatcgagac taattttaac
    15781 tgaactctct tcaaaattaa ttaatttcat gaataattcc ttttatttta attcgtcatc
    15841 aaaataccgt ttgcctgttt ttggtctaaa tgctgtccac catctttagt cttggatatt
    15901 tagattataa tcgtcaaatt cccagtcaaa atattttgcc aaatttgata tagacttatc
    15961 ttcagacgtt gaattacata tttccaatat atcatttatc aattttaata tgtgttcaat
    16021 attaaaacgg tttgtaacaa ttgagttttt taatgacatc ggtctatgta tatttgaaag
    16081 taaccattcg gtgctatata tataaacata aaaataatca gcaccattac tttcatcaaa
    16141 acctattgat aatgtcaaaa gtatacaaaa attttctaac ttgtcttgtg ggaaatcttc
    16201 caaatcaaag tcagaacaat cataattttt taattttaat ctcataatat attgagatag
    16261 cttaggaatt ttattttctc agattgaggc aactcatcaa aaccaagcca acaataaaaa
    16321 ttgttatatg attttaaaaa atcaacaatt tttatttttc ctaaaaccaa atcttcgact
    16381 aactgggttg cataaataat atcatttatg attttaacag gtaaattatt tgataggtaa
    16441 ccatgggatt ccgtcatcat tgatttctct aggtgcttat ttatctgatt ggtaagtctt
    16501 ttgcgtaagc ttctttcgcc tccgcaagtg tcatttcatt agggccacca tctatattag
    16561 tttctcctgt attttgccac tgacaaacgt cacagatatc atagtccata acttcagttc
    16621 cgcaaacagg acaatgtagc catatttctc cgtcaatttc ccatgtcttt tttgaattct
    16681 ccatcataat acttctttcc taagtttggt ttaaacattg ttttgatttt gaatgttttt
    16741 ggattggcca aaacatagat attgttattg atatcatagc gcactcgtct atgttccgtc
    16801 tgataaccta atatcttgtc cgatgtctgt tttgataaca aatcagacgc cattttttgg
    16861 tagtcttcaa tggttatatc gccaaattct tttccatgag ctttgaaatg tccatttaaa
    16921 gatttctcag taggaaactt ggactttgtc catctgatgc ggtcttgaat tgttcctgtc
    16981 ggagaaatag atgtatcagg tttaacatat gaggcaggta agccgatatt gttatcagag
    17041 tgtgtagggt gttgctgcgt acttggtttt ggtggcttat tcccacctgc catctcccca
    17101 tctaaagtct gcatagggcg ggcagtaggt gttttatagc cggtattttt aacccaatcc
    17161 catttggtcg ggttaagttc tactttttta ccgccccaaa ccgtacctcc agtcaggtgt
    17221 agttggatgg ggattcattt ttaataatat cttcaagcaa gtgaaatgta agaaaagcgt
    17281 agatacttga aggccggcta tctgattggc aaaaagaaat ttcggagata aagaatttcc
    17341 gtttatattt ttcataaatt aaatcaacac cttgttttac ataaaaacta acttcctcag
    17401 gaaggatatt tataacattc tctcctttta cttttatagt taatggtttg atttttatgt
    17461 tttcatgaat atctgatagg attatttcta aaaaattatt tttatttcca gtcattctgg
    17521 ctattttatg tatatttcca ttgtgttcga ttatcatttt attttttcca aggatttcct
    17581 tctatattga tagtttatct aaagatttca tttaaaatat cctgactaat ttcttgttta
    17641 tataattcta caattttctg tttctgtgta tttgtataaa atttttcgtt ggtatctgct
    17701 tgatatttta attgtctcaa tatttccatg atttcatatt ctgatttttc atcatattct
    17761 tcaatcatgt aatcaacaaa ttgttttaga atatcaaagg cttcgtaact ttccaaaatt
    17821 ttaatatgtt tatcggcaaa attggacata taccattcgt cagtgattgg attagtattt
    17881 aaatcatcta aaaaaacatt tacatcatct aaaaacatga ctaatcctta aacttaaaat
    17941 ctgttttttc accggttctt gtgttttcaa tgtaatgtat ttcaattttg tttacgtttt
    18001 gaacacgctt aacccaaccg tcttttgcta accaaccatt tttagtatcg gacataggag
    18061 gtattctcgc aggagttttg ccctgtgggt ttgccttaac ttcttccatt gctaattgtt
    18121 cctttaaatt attaggtatt gtacgaccgg ttgatttttc aacagattgt gtccctattt
    18181 ttaatgattt gtttccccca gccatttccc cgtctatagt ctgcatatgg cgaacagcag
    18241 gttttttata gccggtattt ttaacccaat cccacttggt cgggttaagg tttacttttt
    18301 taccgcctca aaccgtagtt gcggcctctg ctatggcaag ggcggtttgg gcagtagctg
    18361 taatgttcgg atgggcatca gcccattgtt tggcagagtt gataccgtct tttaccgcaa
    18421 aagcactgtc ttgtaatgcg gttgc
//
LOCUS       DAXHKG010000032        18233 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.032, whole genome shotgun sequence.
ACCESSION   DAXHKG010000032 DAXHKG010000000
VERSION     DAXHKG010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.032"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(148..1080)
                     /gene="cysK"
                     /locus_tag="ACFMWP_000821"
     CDS             complement(148..1080)
                     /gene="cysK"
                     /locus_tag="ACFMWP_000821"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HFC5891450.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1274..1879)
                     /locus_tag="ACFMWP_000822"
     CDS             complement(1274..1879)
                     /locus_tag="ACFMWP_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891451.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1876..2727)
                     /gene="dapF"
                     /locus_tag="ACFMWP_000823"
     CDS             complement(1876..2727)
                     /gene="dapF"
                     /locus_tag="ACFMWP_000823"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HFC5891452.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPELGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAEAVF
                     EGELAYS"
     gene            2864..3160
                     /locus_tag="ACFMWP_000824"
     CDS             2864..3160
                     /locus_tag="ACFMWP_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891453.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANRILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3174..3842
                     /locus_tag="ACFMWP_000825"
     CDS             3174..3842
                     /locus_tag="ACFMWP_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC5891454.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3914..6037)
                     /gene="pnp"
                     /locus_tag="ACFMWP_000826"
     CDS             complement(3914..6037)
                     /gene="pnp"
                     /locus_tag="ACFMWP_000826"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HFC5891455.1"
                     /translation="MMFNKYVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVFVA
                     VTTNKEVKEGQDFFPLAVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRP
                     LFPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYING
                     VYVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAIN
                     AINEFADEVNPEVWDWKAPETNEELVAKVRRIAGETIKEAFKIRQKQARSAKLDEAWN
                     AVKEALITEETDTLAANEIKGIFKRLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTG
                     VLPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEV
                     GRMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCL
                     SLLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKI
                     REVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGK
                     VYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEV
                     DDRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6271..7134)
                     /locus_tag="ACFMWP_000827"
     CDS             complement(6271..7134)
                     /locus_tag="ACFMWP_000827"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HFC5891456.1"
                     /translation="MSEIGLVKIYFGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLVHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPANVIQKTVEK
                     YQEALTLLTQD"
     gene            7333..8196
                     /gene="rfbD"
                     /locus_tag="ACFMWP_000828"
     CDS             7333..8196
                     /gene="rfbD"
                     /locus_tag="ACFMWP_000828"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HFC5891457.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQ
                     KALAQVVSKLL"
     gene            complement(8671..8904)
                     /locus_tag="ACFMWP_000829"
     CDS             complement(8671..8904)
                     /locus_tag="ACFMWP_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC5891458.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(9070..9270)
                     /locus_tag="ACFMWP_000830"
     CDS             complement(9070..9270)
                     /locus_tag="ACFMWP_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HFC5891459.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(9442..10317)
                     /gene="xerD"
                     /locus_tag="ACFMWP_000831"
     CDS             complement(9442..10317)
                     /gene="xerD"
                     /locus_tag="ACFMWP_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HFC5891460.1"
                     /translation="MEEGLIDRLLETLWLDRRLNQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVGRYYTEARPALLKGRSCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(10369..10809)
                     /locus_tag="ACFMWP_000832"
     CDS             complement(10369..10809)
                     /locus_tag="ACFMWP_000832"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HFC5891461.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            11130..12068
                     /locus_tag="ACFMWP_000833"
     CDS             11130..12068
                     /locus_tag="ACFMWP_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HFC5891462.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            12197..12490
                     /gene="hfq"
                     /locus_tag="ACFMWP_000834"
     CDS             12197..12490
                     /gene="hfq"
                     /locus_tag="ACFMWP_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HFC5891463.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPASTLVQVETVQQPAE"
     gene            12574..13140
                     /locus_tag="ACFMWP_000835"
     CDS             12574..13140
                     /locus_tag="ACFMWP_000835"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC5891464.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALNNTRCRLQEAGYSNVRFILDGHENLKQYIPKPLDAAIFNFGWLP
                     GGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAVGQWAKNLPQE
                     QFAVLRYGFTNRKNSPPYLLAFEKLRQK"
     gene            13194..13568
                     /locus_tag="ACFMWP_000836"
     CDS             13194..13568
                     /locus_tag="ACFMWP_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HFC5891465.1"
                     /translation="MQYLFVKYSHQIFVTITILVFNIRFFLLWKNPEKPLAGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            13578..14072
                     /gene="folK"
                     /locus_tag="ACFMWP_000837"
     CDS             13578..14072
                     /gene="folK"
                     /locus_tag="ACFMWP_000837"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HFC5891466.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(14197..14676)
                     /locus_tag="ACFMWP_000838"
     CDS             complement(14197..14676)
                     /locus_tag="ACFMWP_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HFC5891467.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDCKDNAYKRALSALSRKL
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVFQI"
     gene            complement(14896..15633)
                     /gene="ubiE"
                     /locus_tag="ACFMWP_000839"
     CDS             complement(14896..15633)
                     /gene="ubiE"
                     /locus_tag="ACFMWP_000839"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HFC5891468.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(15676..16044)
                     /locus_tag="ACFMWP_000840"
     CDS             complement(15676..16044)
                     /locus_tag="ACFMWP_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HFC5891469.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            16164..17783
                     /gene="mnmC"
                     /locus_tag="ACFMWP_000841"
     CDS             16164..17783
                     /gene="mnmC"
                     /locus_tag="ACFMWP_000841"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HFC5891470.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLREHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMQQTYAKLALDKNYRIDAPCPYLPNAYANTAHGTRGLATAPICAAAVAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(17897..18014)
                     /locus_tag="ACFMWP_000842"
                     /pseudo
     CDS             complement(17897..18014)
                     /locus_tag="ACFMWP_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT         4619 a         5417 c         3921 g         4276 t
ORIGIN      
        1 tatttccctc aagcgatgtg gcggcaccaa cacctgatta aaacacaacc ggcgttttcg
       61 gcatatacgc aaaaacgcat tttccggcac ggcgttacac cgataccgaa aaatgcgtct
      121 gaatgtttcg acaatccgat taaagcatta tgccaaatct gcaaaaagtg gcgtagagag
      181 atagcgttcg ccataagaag gcagcagcac gactatcagc ttgccttcgt tttcaggctg
      241 tttggcaagc tgcaacgcac tccaaaccgc cgcaccggaa gaaataccca ccaaaatgcc
      301 ttctttttcc gctattgcgc gggcggtttc aaaagccgct tcgttcgaca ctttggtaat
      361 gctgtcgtaa attttggtat tcaaaacggt cggaataaag cctgcgccga tgccttgaat
      421 cgggtgcggg cctttttcgc cgccgctcaa tacgggtgaa gcttcaggct cgacggcaac
      481 cactttaact tcgggtttgt attttttcaa cacttcgccc acgccggtaa tcgtaccgcc
      541 cgtgccgacg ccggcaacga agacatcgac tttgccgtcc gtatcccgcc aaatttcctc
      601 ggcggttgtt ttgcggtgga cttcggggtt tgcctcattg tcgaactggc gcggcataaa
      661 ataagtgtcg ggatgcgcgt ccaccaagga tttcgctttg gcaatcgcgc ccgccatacc
      721 ttcggcggca ggggtcagaa tcagctccgc accaaacgcg cgcaacagca ttttgcgctc
      781 cttactcatg ctttccggca tggtaatcgc cagcttgtag ccgcgtgcgg cacataccat
      841 tgccaaaccg acacccgtat tgccgctggt tgcttcgaca atgacggtgt ttttgttgat
      901 tttgcccgct ttttcggcac cctcgatcat tgcttcggca atgcggtctt tgacgctgct
      961 gcctggattg aaaaattcca gtttcacggc aacctccgcc ttcaaacctt cggtcagacg
     1021 gttcagtttg accaaaggcg tgttgccgat tagttcggtg atgctgtttg caattttcat
     1081 cttctgctcc tgaataataa ggtttcgaca gtaaggcgca atccccatag gcatcctgtc
     1141 cgattgcagg ggatttgcgc cgaaacataa acaaatttcg gatatggctt tatcctaaac
     1201 ctatgccgcc taaaaaacca atatccaaaa tttctttctt tataactttt tgttccgata
     1261 cggccgcacc gtattatctt ccaatttctg aaagcagcag caccagtacc gagacctgca
     1321 tcaacgctgc cgtcaacccg ccgagtcgca gctgcgagcc gccgaacgtt gacggcggct
     1381 gccggtctat accgcagcgg tggacatagg caaccgccat cagcacaaac tgcaacacga
     1441 accaataaac cggcttcagc gcataaagtt tgagcagtgc cgcaaacaca aacacttgaa
     1501 ccgttcccga aaagcaataa tgcaccaacg cacatattcc gacaaaagca agcgtcatcg
     1561 atacattact gacggcaaac agcccgagca gcggatgttc ggggtctgcc tgccatccgt
     1621 ttccatccgt tttccggttc caatgcccga tgaaaaaaaa tatgctgccc aaagtcaggt
     1681 aaaaatgggg gatgaacaag ggcgcggcgc gggtcattcc ccatatgccg ggcatcagct
     1741 ttgcccccaa aaccgatatg cccagccaca gcataatact cgcccaaaac cattgcaaca
     1801 ttcctgcgcg gaatatcaga aacagaaaaa ccgccgcata cagtaaggca gacaaaaaat
     1861 ccaaatgcag caaaatcatg aatacgccaa ctcgccttca aacaccgctt ccgcagggcc
     1921 ggtcatcatc acatcgccgc cgcaggccca ttcgatatat aaagtcccgc ccggcaaaat
     1981 cacctctacc gttttccctt catccaacaa ccccagacgg atacccgcca ccacagccgc
     2041 acacgcgccc gtaccgcacg cttgggtttc gcccacgccg cgctcgaaca cgcgcaaacg
     2101 aatcgcggtt cggctgacaa tctgcataaa gccgacgttg acgcgttcgg gaaactgcct
     2161 gtgcggttcg ataagcgaac cggtttcgcg caccggcgcg cattctacgt catcgaccac
     2221 aatcaccgca tgggggttgc ccatattgac gcagctgaca ggctgaatgc cggattcgag
     2281 atgcaccccg taaatacagg catcatcccc ctcgcccaat tcggggacaa acggtatttc
     2341 agacggcata aacctcggtt tgcccatatt gaccgtaacc atgccgttat cggacaattt
     2401 cggaaaaata acgccatttg ccgtttcaac acaaatttct ttcttatcgg tcaaaccctt
     2461 gtctgcaaca aaacgggcaa aacaacgcgc tccgttgccg cattgcccga cctcgctgcc
     2521 gtcggcattg aaaatacggt aacggaaatc cacgccttcg gtttccgaac gcccgaccac
     2581 caaaagctgg tcgaagccca cgcctcggaa gcggtccgcc catgccgcaa tcggcgcgtc
     2641 ctcgggggta aaatcctgac tgaccgcgtc aatcaccata aaatcgttgc ccaaaccgtg
     2701 cattttggta aatttcaacg tgttcatatt gttccgaaat cccgtatcgt ctgttgcttc
     2761 cgaatccgaa atcccccgca ccgaagggaa atgcttccat ctcccgccgc ctgaggatta
     2821 aaatcagcca ttatactgtt tgttacccct tacaagaaac accatgttcc gcatattact
     2881 gttgcttttc ccttgtgcaa tccttgccgc ctgcacccga aacataccgg caaacccggc
     2941 cgtttcaaat tgcgcgcatc ttcaaaaccg caccatcctg tattttgacg cacacggcaa
     3001 acccgccgac ggcgcagtaa agggcggatt ttacaaaatt atcgaaatac agggtgcaaa
     3061 ccgcatcctt attcaagact ttaacagcac gggcaatgcc ctcggcggat cctatgtgcc
     3121 ggactgccgc aaatcatccc ttttcccgaa aaatatttga cttcaaactg cctatgaacc
     3181 acgacatcac tttcctcacc ctgttcctac tcggtttctt cggcggaacg cactgcatcg
     3241 gtatgtgcgg cggattaagc agcgcgtttg cgctccaact ccccccgcat atcaaccgct
     3301 tttggctgat cctgctgctt aacacaggac gggtaagcag ctatacggca atcggcctga
     3361 tactcggatt aatcggacag gtcggcgttt cactcgacca aacccgcgtc ctgcagaata
     3421 ttttatacac agccgccaac ctcctgctgc tctttttagg cttatacttg agcggtattt
     3481 cttccttggc ggcaaaaatc gagaaaatcg gcaaaccgat atggcggaac ctgaacccga
     3541 tactcaaccg gctgttaccc ataaaatcca tacccgcctg ccttgcggtc ggaatattat
     3601 ggggctggct gccgtgcgga ctggtttaca gcgcgtcgct ttacgcgctg ggaagcggta
     3661 gtgcggcaac gggcgggtta tatatgcttg cctttgcact gggtacgctg cccaatcttt
     3721 tggcaatcgg cattttttcc ctgcaactga aaaaaatcat gcaaaaccga tatatccgcc
     3781 tgtgtacggg attatccgta tcattatggg cattatggaa acttgccgtc ctgtggctgt
     3841 aagccccatt cattcccgat acccgtaaaa ataccgtctg aaacctgttc agacggcact
     3901 ttcaccctaa gcgttactcg gcggcatttt cctcacgggc aggcgcgtcc agcagggctt
     3961 tgatggacag acggacacgg cctctgtcgt ccacttccaa tgctttcacg ttcaccacct
     4021 gaccgacttg caggtagtcg ccgacattgc gtacgcgctc gtgggcgatt tggctgatgt
     4081 gtaccaaacc gtctttgccc ggcatcacgc tgacaatcgc gccgacattg ttgtcgagga
     4141 ttttcaccac agtgccttcg tacactttgc ccacttccac ttcggcagta atctgctcga
     4201 tgcgtttttt cgccgcatcg ccggcttctt gagtggttgc ggcaatggta atcgtaccgt
     4261 cttcggcaat attgatttcc gtaccggttt cagcggtaat cgaacggatg gtttcaccgc
     4321 ccttaccgat aacttcgcgg attttgtctt ggttgatttt catcgtgaac aagcgtggcg
     4381 cgtgtgcgga cagctcttgc gggcccgcaa cggcggcttt catctgatcc aagatgtgca
     4441 gacgcgcttc tttggcctgt gccaaagcga tttgcataat ttctttggta atgccttgga
     4501 ttttgatgtc catttgcagc gcggtaacgc cttcggtcgt accggccact ttaaagtcca
     4561 tatcgcccaa gtggtcttcg tcgcccaaaa tgtcggtcag gacggcaaat ttgttgcctt
     4621 ccagaatcag acccatcgcg ataccggcaa cgtgtgcttt caaaggcacg ccggcagaca
     4681 gcaggctcag gcagccgccg cagacggaag ccatagagga agagccgttg gattcggtaa
     4741 tttcggagac cacgcgcatg gtgtagctga aatcttcagg tttcggcaat acggccaaca
     4801 atgcacgttt agccaaacgg ccgtgaccga tttcacggcg tttcggtgcg cccatgcggc
     4861 ccacttcgcc ggtagagtac ggcggaaagt tgtagtgcag cataaagcgg tcggtatatt
     4921 cgccggacaa cgcgtcgatg atttgttcgt cgcgcgaagt acccaaagtc gctacggcaa
     4981 gggcttgggt ttcgccacgg gtaaacagtg cggaaccgtg cgtgcgcggc aatacgccgg
     5041 tttggatgtt cagcggacgg acggtgcggg tgtcgcggcc gtcgatgcgc ggttgtccgt
     5101 ccaaaatttg gctgcggacg acatcggctt ccaagcgttt gaaaatacct ttgatttcgt
     5161 tggctgccag cgtgtcggtt tcttcggtaa tcaaggcttc ttttaccgca ttccaagcct
     5221 cgtccaattt ggcggaacgc gcttgttttt gacggatttt gaacgcttct ttaatggttt
     5281 cgccggcaat cctgcgtact ttggcaacca gttcttcatt ggtttcaggt gctttccaat
     5341 cccaaacttc cggattcact tcgtcggcaa attcattgat tgcattgatg gcaacctgca
     5401 tttgatcgtg gccgtaaacc accgcgccca acatcacgtc ttcgggcagg attttggctt
     5461 cggattccac catcaacacg gctttggaag taccggcgac caccaagtcc aattgtgatt
     5521 tcgccaactc ggctttagtc gggttcaaaa cgtacacgcc gtttatataa cccacgcgcg
     5581 ccgcgccaat cgggccggcg aacggtacgc cgctcaacac cagcgcggcg gacgcgccca
     5641 acattgcagg aatgtcggaa tcgatttcgg gatcgacgga cacaaccatc gctacgattt
     5701 ggatgtcgtg gtagaaacct tcggggaaca gcggacgaat cgggcggtcg atcagacggc
     5761 tggtcaggat ttctttttcg ctttgtttgc cttcgcgttt gaagaagccg ccggggattt
     5821 tgcctgcggc ataagtgcgt tccaaataat cgacggccaa cgggaagaag tcctgacctt
     5881 ctttgacctc tttgttggtg gtaacggcaa caaaaacaac agtgtcgccc atcgatactt
     5941 taacggcagc ggcagcttgg cgggcaattt cgccggtttc caaagtaacg gtttgattac
     6001 cgtattggaa ggtcttaacg tatttattga acatcattgt tcctttcaaa ataccgcact
     6061 gctaaaacac taataatgca cactaaaatc cgaatgtgca tagttagggt ttcagaccgt
     6121 gcggcaggtt ataaacaagc tttcagacgg cactccggac gctgaaaaca gcccccgatt
     6181 ataaaggcaa ccatccttaa aatccagtat tgatacaata aaaaggccgt ctgaaccata
     6241 tttctttcag acggccttca aacttaaaaa tcaatcctga gtcagcaaag tcaatgcttc
     6301 ctgatatttt tcgactgttt tttgaatcac attggcaggc actttaggcg caggggcttt
     6361 tttgttccaa ccgctttgtt ccagccagtc gcggacaaat tgtttgtcaa aagacggcgg
     6421 atttgtgccg actttatatt ggtcggcagg ccagaagcgg ctcgaatcgg gggtcaatac
     6481 ctcatccatc agcgtcagcg taccgtttgt atccaaaccg aattcaaatt tggtatcgca
     6541 aatgatgatg ccgcgcgatt tggcatattc cgccgcttct gtataaagct gaatcgcttt
     6601 ggcgcgcact tccgccgcca attcttttcc gataatgcgt tcgcattctt caaagctgat
     6661 gttttcatcg tgatcgccga ctgcggcttt ggttgagggc gtaaaaatca cttcaggcag
     6721 ttgttgcgct tcctgcatac cttcaggcag ttgaataccg caaaccgagc cggttttttg
     6781 ataatctttc caaccgctgc ctgccagata accacgcaca atcgcctcta ctttcaccgg
     6841 agtgagcttt ttagccacga cggcgcgttt ctctaaagct ttggcttcgt tttcaggcaa
     6901 aacatcgtaa accgtttgac cggtaaagtg gttgggcata atatgcacca gttttttaaa
     6961 ccaaaaattg gaaatctgcg tcagaatctc ccctttgctc ggaatcgggt cgtccaaaat
     7021 cacatcgaat gcagacaggc ggtcggaagc gaccatcagc atacgtttat cgtcgatttc
     7081 atataaatcg cgcacttttc caaaatagat ctttaccaaa ccaatctcac tcatttcgcc
     7141 ccccctgaaa atatcttgaa aataccgacc cgacacccga caggtttgaa tcacaaacca
     7201 atattctagc cgaagtcggc gcaaaacaat acccatggca caaaaaacca acccgtcaac
     7261 cgtcggcaaa gttttggcac tataataccg acagcaagtc ctacaataca cttttaccaa
     7321 aggaaatacc tcatgagaat cctattgaca ggctcgaaaa gccaactggc acgctgcctg
     7381 cgcgaccgtc ttccggaaga ctgggaaacc attgcgacgg attccgcatc cctagacatt
     7441 accgatgccg atgccgtctg caacatggtc aaaagtttcc aacccgacgc tattgtcaac
     7501 acggctgcct atactgccgt cgacaaagcg gaaggcaatg cggcagcggc atttgccgtc
     7561 aatgcttccg ccgtttacaa ccttgccttg gcagcacatc gcgcccatgc ccgattcatc
     7621 cacatctcaa ccgactatat ctttgacggt aaagggaaaa ggccctatca ggaaagcgac
     7681 tttaccaatc cttccaatgt atacggacaa tccaaaaccg caggcgagct gctcgcactg
     7741 tctgccaatc ccgacagcct tatcctgcgg acttcttggc tgtttagcga atacggggac
     7801 aactttgtcc gcacgatgct gaaccttgcg cgggaacgtt ccccgctgtc cgccgtccac
     7861 aaccaaatcg gctgcccgac ctatgccggc gatttagctg ccgccatcat ccgccttttg
     7921 cagcaaacgt cgcccgtgcg cggcatttac cactacgccg gcggcaaatc cgtatcctgg
     7981 tacgaatttg cccaacatat tttccaagcg gcatcgcaac agcagacatc cttccccgtt
     8041 cccgaattga ctgccgtttc agacaaggaa tatccgaccg ccgcccccag gcccgcatac
     8101 agcattttgg actgccgcaa aatcgaaaac gacttcagca tcaaaccgtc agactggcaa
     8161 aaagcccttg cacaggtcgt ttccaagctg ctctgatgcc gcccgcctct ccgtttccgc
     8221 cgtcaagcac cgccttggcg gttttcttat atagtggatt aacaaaaacc agtacggcgt
     8281 tgcctcgcct tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt
     8341 gttaatccac tataaaatct accgattaca caaacacata tcatctttac acaatcatgc
     8401 ttccatcaac agtaaaacat gatatgattg ccaacaataa catctcacaa taaattttct
     8461 aatttttatt gaaaaaatca ataaataaga attctcccaa ccgacaaata aaataaagaa
     8521 agggttaata tgcaacatcg aagaagacta gcaatttacc aagcatccaa acgtgcttcc
     8581 tttaccggca ggtcatccgc cccgcaaaaa cgtaaagaac gttgatttga aaaaaatgcc
     8641 gcctgaagtc ctgcttcaga cggcattttt ttaccgttcg agaaactgtt tcaacctgtc
     8701 ctcatccaaa aaccagtggc agatttcctc atctcccgcc aacaaaacgg gaaccagctc
     8761 attgtatttt tcttccaaaa caggattttc atccacatcg accacttcca gcccgaaccc
     8821 gtattcattt tgaaaaggtt tgagtgcatc gcgcattttg tggcacaagc tgcaatattc
     8881 acgaaacatc aaggtcaatt tcatccgcgt ttccttatct gtcaatttgc acacgccaaa
     8941 gccttagacg cagcagaatc atggtctatt tgggaaaaaa caatgttttc aaggaagatg
     9001 atactcaagt cctgccaaaa acagcaaaaa tgccgtctga acagttcaga cggcatttcc
     9061 aaaaccgttt tacgcttgaa cgttgatacc cgccgtaacc gtcggttgcg cattgtgcgc
     9121 cgtcagaaac gaagcggcaa gctccccgca gcagccgcag cagctcgcta cgcccaattg
     9181 cgactgcaaa tcgcccattg tggtcgcgcc ggcggcgatt gtttccttga tttgatggtc
     9241 ggtaacggca ttgcagatgc agacaaacat tttgtgctcc gtgtgttctc aaactatcgt
     9301 accgatagcg gcttttatta tcgtatgcaa atataaataa aaacggttcg cattgcaagg
     9361 tcggcataca cggtttgtct tggtaatttt ttatcaagtt tgcattttcg attgatttct
     9421 tattaaaccg aagcagaagc ctcagtttcg ggaatggtgt tccttcacta caccctgcaa
     9481 ccatacattg gcaacatggg tataaatctg cgtcgtattc aaatcggcat gtcccaacat
     9541 atcctgaacc acgcgcaaat ccaatccgtg ctgcaccaag tgcgtggcga aggcatggcg
     9601 caggctgtgc gggctgatgt gcccgatgcc tgccctacct gcatattctt tgacaatcat
     9661 ccatgccaac tgacgggaaa tacctgtttt tttctgactg acaaacaagg catcgcaact
     9721 cctgcccttc aacaaggccg gacgcgcctc cgtgtaatag cgtcccaccc aatacgccga
     9781 ttcctgcccc atcgggacca tcctctgctt gtcgcccttg cccagcgcgg taatacagcc
     9841 cctgtccaaa tccacattgc cgaagttcag cccgaccgcc tcgctgacgc gcaagccggt
     9901 cgcgtacatt aattcaagca gggccttgtc ccgcaaaccg tgcggcgtgt cggtatccgg
     9961 tgcggcaagc agtcgggaaa tctgctgttc tgtaatcagg gtcggaatat tcttgtcgat
    10021 tttgggcggt ttcagcaaac gggtgggatt gtccgtcctt atgccttcac gctccatcca
    10081 tatatacagg cgtttgcatg ccgataatgc gcgcgcctgc gaactccgtt gctctccgtc
    10141 aacataaacc gccgccgcca aatccgcttc gtccgcatcc ttcagcattc tgcccgattg
    10201 ggacaggcgg cgggcgattt tttccaaatc gcgccggtaa ccgtttaaag tattctgatt
    10261 gagccgcctg tccaaccaca gcgtttcaag cagcctgtcg atcaaacctt cttccatacc
    10321 gttccaaaca aatgccgtct gaatcttctt cagacggcat ggttcacatt atcgggaaag
    10381 cgtttccaat acttcctgcg cgtgacccgc cactttgact ttccgccatt catgggcgat
    10441 ttctccatcc ttattcaaga cgaacgtact gcgctcgata cctaacgact ctttcccgta
    10501 cagtttcttc aatttgatga catcaaacag gcggcacact gtttcatcct tgtcgctcaa
    10561 cagctcgaac cggaaaccct gcttggcgca aaaattctga tgcgccttta cgccgtcgcg
    10621 ggaaataccg accacggtat aacccaatgc ctcaaactgt tccaaacgcg cattgaaatc
    10681 caagccttcc gtcgtacagc ccggcgtact gtctttcgga taaaaataca cgaccaaagg
    10741 cagatgttct gccgaatgaa aatccgcacc gctgctcgaa ggcagggtaa attcatattt
    10801 cacatccata gtcctactcc cgatattccc attattcaaa acggcacgca gaggcaccgc
    10861 cgcaattgcc aaaccaaccc cgattctacc gccccaaagg acaaggattc aactgccgga
    10921 aacatccaaa ccgacacacg acggcatgaa aaatatccat gtcaaaccac aaaatatgtt
    10981 ccgatttaaa aacagaatgt tataaaaccc aatccccaaa acacaacaag accgcccgcc
    11041 tacgggcagt ctcctgtcag acgacatact ttacagatgg ctgttttttc aacaaaataa
    11101 cgccaatact caaaaatatg gaatcaaaaa tgtccatcca tactctgaaa cgcctgccct
    11161 catcgctgct gctcggtctc tgcctttccc tgccgtcagc ccaccttttt gccgacaacg
    11221 acattttagg gcaattttta gaacagaaca tgcttacctc ctccgatccg atagaaatat
    11281 tcgccgaaag cacaatacac cccaccaaca cccaagccat tacaggcggt ctgattctct
    11341 cctcacagtc tgccctggtc gtcaacaaca aaaccggaca gatactgtat cagaaaaacg
    11401 ccgacaggat tatgcccatc gcctccattt ccaaactgat gagcgcgatg gtcgttttgg
    11461 atgcaaactt ggacatgaac gaaaccgtta ccattacgcc cgacgaaatc gaccgcctca
    11521 aagggaccgg cagccgtctt gccataggta cggcacttac acgcaaagaa ctgctgcacc
    11581 tgagcctgat gagcagcgaa aaccgcgcca cccatgcatt gggcagaacc taccccggcg
    11641 gcatgggcgc atttgtcgcc gccatgaacc gtaaagccca aagcctcggt atgtacggca
    11701 gccgctttta cgaaccgacc ggactcaact tccaaaacgt ttctaccgcc aaagacctga
    11761 gccttatggt caacgccgcc gcccaatatc cgcaaatccg caccaactcg acttccaact
    11821 acgcctcggt acagaccaaa aacgggcagc agaactacaa aaactccaat gccctggtca
    11881 gagaaggcat gtggaacatc gaattgcaga aaaccggcta catacgcgaa gcaggcaggt
    11941 ctatggttgt caaagccaac attcaaaatc aacccgttac catcgtattg ctgaactcgc
    12001 ccacatccgc cacacgcgtc aacgacgccc gcaaaatcga atcgtggatg ctgcagcaac
    12061 gctcctgaca tacaaatgcc cggcggaaaa ccgcccaaac acaaaaaaaa ttggtaattt
    12121 ttcctattca aggctacaat tcgacacgca cagggcgtct gcccgatttc acaatcataa
    12181 taacggagtt aaaaatatga cagctaaagg acaaatgttg caagatccct tcctgaacgc
    12241 cctgcgtaaa gagcacgttc cggtttcgat ttacctggtc aacggcatca aactgcaagg
    12301 tcaggttgaa tctttcgacc aatacgtcgt tcttctgaga aacacttccg tcacccaaat
    12361 ggtttacaaa cacgccattt ccaccatcgt accggcacgc tccgtcaacc tacaacatga
    12421 aaacagaccc caagccgcac cggcttcgac cctcgtccaa gtggaaaccg tccagcagcc
    12481 tgccgaataa tccgcacgaa gcatgacgtg tcatatcttt caatacctta ccgacatcgg
    12541 taaggtattt ttattttcag acagcattta aaaatgttat tgcaaaacat ccttccattc
    12601 gcccattgcc ttttgcggaa ggcacttccc gaaggcggca atgcgctgga cggcaccgcc
    12661 ggcaacggac acgacaccct tttcctcgca caaaccgcag gcatccgggg gaaagtgtgg
    12721 gcattcgaca tccagccgca agccctgaac aacacccgat gccgtctgca ggaagcaggt
    12781 tacagcaatg tacggttcat cttggacgga catgaaaacc tgaagcaata tattccaaag
    12841 ccgctggatg cagccatttt caatttcggc tggctgcccg gcggggacaa aagccttacc
    12901 acccgcacgg aaaccagcat tgccgccctt tctgccacct tatccctact gaaagaaaac
    12961 ggtatgctta ttgccgtcct ctatccggga cacgaaaacg gcaaacagga ggcagaagcc
    13021 gtcggacaat gggcaaaaaa cctgcctcaa gaacagtttg ccgttttacg ttacggcttt
    13081 accaaccgga aaaacagccc accctatctg ttggcatttg aaaaactgcg tcaaaaataa
    13141 ctgtttgcgg taaaataagc cgattccaac ccttattttg ataagagccg accatgcagt
    13201 atctgtttgt caaatacagc caccaaatct tcgttaccat caccattttg gtattcaaca
    13261 tccgtttttt cctactttgg aaaaatccag aaaagccctt ggcgggcttt tggaaggcac
    13321 tgccacacct taacgacacc atgctgctgt ttacgggatt gtggctgatg aaaattaccc
    13381 atttctcccc gttcaacgcg ccttggctcg gtacaaaaat cctgcttctg ctcgcctata
    13441 tcgcattggg tatgatgatg atgcgcgccc gtccgcgttc gaccaagttc tacaccgttt
    13501 acctgctcgc catgtgttgc gtcgcctgca tcgtttacct tgccaaaacc aaagtcctgc
    13561 ctttctgaaa caccgttatg aacaacagac attttgccgt catcgccctg ggcagtaatc
    13621 ttgaaaaccc tgcccaacag gtacgcgccg cattggacac gctgtcgtcc catcctgaca
    13681 tccgtcttaa acaggcttcc tcactgtata tgaccgcgcc cgtcggttac gacaatcagc
    13741 ccgattttgt caatgccgtc tgcaccgttt ccaccactct ggacggcatt gccctgcttg
    13801 ccgaactcaa ccgtatcgag gctgatttcg gacgcgaacg cagcttccgc aacgcgccgc
    13861 gcacattgga tttggacatt atcgactttg acggcatctc cagcgacgac acccgactca
    13921 ccctgccgca tccgcgcgcg cacgaacgca gtttcgtcat ccgccctttg gcagaaatcc
    13981 tccctgattt tgttttagga aaacacggaa aggttgccga attgtcaaaa cggctgggca
    14041 atcaaggtat ccgtctttta cccgacaggt aattccgcac gcggatgccg tctgaaagcc
    14101 tttcagacgg catttttcct ttgccgccaa cacgcgtgca aaaaaatcgc cccttggaaa
    14161 aggggcgcaa aaggaacaca aaccactacc aaaactttaa atctgaaaca ctgcctgccg
    14221 catactgtat ccgacaggat ataaagccct cactaaatcg tttcgagaaa tccaaacttc
    14281 ttcatcgccg acagaaaatc tgcctttctc cggtaccagc tccaacagaa acggttgaac
    14341 cgccgtatgc aacttgtcct tacaccgccc cagctttcta gacaaggcgg acagggcgcg
    14401 tttgtaggca ttatccttgc agtcaagctc ccgcgcactg ccgacccagc tcaaacgaag
    14461 gttgcggctt tcatcctcaa tcagcaaaat gcctgttttg acttccccca cctcgggctc
    14521 gcatgaaagc gcaatataat atttgccgtc gatgttgaca tacgccgctt catgcacctg
    14581 acagttgcag ccggaagtgg caagcagcga ataaacagag tcccgatgca gtttcaaaat
    14641 atcaagggaa atctgtttaa aaatactttc cggcattttt ccctcctttc gtctgctgcg
    14701 ttgtttactg gattgactgc attatacaga catctcccaa tcttgcaaat gataattgtt
    14761 cctatttttt aaaaaattta taaattattg atggatatgt gaattaattt taagatttaa
    14821 aatctctttc tcaaaaaaac acaaaaatgc cgtctgaaac gtgttcagac ggcattggct
    14881 tcacaggcag tccgtttaaa atttcacgcc cttatgcagc gcgacgatgc ccgcactcat
    14941 attgtgataa tccacgctgt cgaagcccgc atccagcatc atctgtttca aagtttcctg
    15001 atcggggtgc atacggatgg attcggcgag atactggtag ctgtccgcat ctttggcaat
    15061 cagtttgccc atgaccggca gcagcttgaa cgaatagaaa tcatacgcgc cttcgagcgg
    15121 cttgtagatt ttggaaaact ccaacaccag caacgtgccg ccaggtttca aaacacgata
    15181 catctctttc agcgcggcat ctttatgcgt catgttccgc aagccgaacg ccacggaaac
    15241 taagttgaaa taattgtcag ggaaaggcag tttttccgca tcggcaagcg acacgggcaa
    15301 aatcatgcct tcgttcaaca gacggtcgcg cccgacggtc agcatagagg aattaatatc
    15361 ggtcagccaa acctcgcctt ccttgccgac ccgtttcgcc caaccgcgcg acaaatcgcc
    15421 cgtaccgccc gcaatgtcca acactttatc gccttttttc aggtgcgccg tgttgatggt
    15481 gaaatgcttc cacaccctgt gcagccctgc cgacatgaca tcattcataa tgtcgtagtt
    15541 tttggcgacg gagtggaaca cttccgccac tttgccggct ttctcatctt cgttgaccgt
    15601 gctgaacccg aaatgcgttt tttgtccacc catattctaa ccacctccct gataccgccc
    15661 tacggcatcc caaacttaac aatctgattg cttttcaaaa cgcgacgcgc ccgccgccgc
    15721 caatttgtcc aaatattcct gccacatcgc atcgtatccg tatgccagtc tgtgcagata
    15781 cgcccaatcg taaagaccgc tgtcgtgccc gtccgaaaaa ctgattttca gcgcgtactg
    15841 tccgacaggc tgcaaatccg taatttgcac atctgcctta ccggtctgca aaacatcctg
    15901 tcccacaccg tgtccgcgca cttccgcact cggcgaatag acgcgtaaaa attcggcagg
    15961 cagattttta ggttcgtccc cataagtcaa aaccaacacg gtacggtttt tcaacaaacg
    16021 gatttcaaca ggaatattat tcaaaaaaca cctcggttcg gcatacaata tccggcaggc
    16081 gcaggcgtgc cttcaaacgg cgcgtatttt aacagcttta tcccgatacc gatattcaaa
    16141 cccacacttt aaacggcatt gatatggaca atctcgtatg ggacggcgtt cccgacatcc
    16201 gcacactcga ccaaaccatc cgcaaacacg cacacccgct caacctgatt gtctgcctcc
    16261 ccgataatca gattcccgat tttcaaaccg cacaagatgc ttcggacgcg gaatgccgtc
    16321 tgaagcaccg tttggatcag gcaacgcagt gcctccagtt cgacagcatc aacctcatcg
    16381 aacacatcct gcccgatgtc cgcttctggc tggttccccc ttcacgcacc cgccgcctgc
    16441 gcgaacactt ccaccacatt tcctggcaga ccgaagccat cccgcaaacc gaaagtaagc
    16501 ccgacaaacc ctggtttgca cttccacaaa catccgaacg gcaaaaaccg gaacacatcc
    16561 tcgttatcgg cgcgggcata tccggcgcgg caaccgccca cgccttagca tcgcacggca
    16621 tttccgttac cgtattggaa gcccgaaaag ccgcccaagc cgccagcggc aaccgccaag
    16681 ggctgctcta cgccaaaatc tcgccgcacg acaccgaaca gaccgaactt ttgcttgccg
    16741 gctacggcta caccaaacgc ctgctcggac acatcctgcc cgaatccgaa acctggggcg
    16801 gcaacggcat catccacctc aattacagcc gcaccgaaca acaacgcaat cacgaattgg
    16861 gtttgcaaaa acaccataac cacctctacc gcagcatcac gcaggcagaa gccgaaaaaa
    16921 tcgccggtat cccactgtcc gtcccatacg accacccttc atgcggactc tactggcaac
    16981 acggcgtatg gctcaatcca cccgcattcg tccgcaccct cctcaaccat ccgctcattg
    17041 gactacacga agacacaccg ttaaccgaca tttcccacga cggggaaaag tggattgcaa
    17101 gcacgccaaa cggcatattt tccgccacac acatcatcta ctgcaccggc gcgcacagcc
    17161 cccgcctgcc cgaaaccaac ctcgccgccc tgcctctcag gcaaatacgc ggacaaaccg
    17221 gcctcacacc gtccaccccg ttttccgaac aactgcgttg cgccgtttca ggcgaaagct
    17281 acatcagccc gtcgtggcac ggactgcact gctacggcgc gagttttatt cccaacagca
    17341 gccataccgg atggaacgaa gccgaagaag cctcaaaccg ccaagcattg gcacacctta
    17401 accccgccct ttccgaatca ttgtttgccg ccaacccaaa cccccaaaaa caccaagggc
    17461 acgccgccat acgctgcgac agccccgacc accttcccct agtcggcgca ctcggcgaca
    17521 ttgccgctat gcaacaaact tacgccaaac tcgcgctgga caaaaactat cgcatcgatg
    17581 ccccatgccc atatctgcct aatgcctacg ccaacaccgc ccacggcaca cgcgggcttg
    17641 ccaccgcccc catctgcgcc gccgccgttg cagcccaaat cctaggcttg ccccatccct
    17701 tttcacaacg cctgcgccac gccctacacc ccaaccgcac catcatccgc gccatcgtca
    17761 gaaggaagga tctaacccct taagcctttg ccgcatgccg tcccgaccac agaaaatcat
    17821 attcaaataa acataccaat cctgacggta aaatatcgaa aacacccata acattttctt
    17881 cccaaaataa ggagtaagga atgcctaaca aattgccttt gctgtccaag atgaatgttc
    17941 cgtaacattc gaagacttcc ttaaccctgc cagccgtttc ggtttctgta ccccctgtta
    18001 gataaggaag gaatgaaaaa gccctgttga ttgtatgaag taaagggagt taatttttgt
    18061 taatcttccc ttctcaggaa ctcaatatat aaggatgtta atttttattt cccttctcga
    18121 ggactcaata tagtggatta acaaaaacca gtacggcgtt gcctcgcctt gccgtactat
    18181 ttgtactgtc tgcggcttca tcgccttgtc ctgatttttg ttaatccact ata
//
LOCUS       DAXHKG010000033        17345 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.033, whole genome shotgun sequence.
ACCESSION   DAXHKG010000033 DAXHKG010000000
VERSION     DAXHKG010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17345
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.033"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..190)
                     /locus_tag="ACFMWP_000843"
     CDS             complement(<1..190)
                     /locus_tag="ACFMWP_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891471.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGLMPSEGSDGIGIGESE"
     gene            complement(208..765)
                     /locus_tag="ACFMWP_000844"
     CDS             complement(208..765)
                     /locus_tag="ACFMWP_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC5891472.1"
                     /translation="MDALKLLTNRRSSKKLKPPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(841..2475)
                     /locus_tag="ACFMWP_000845"
     CDS             complement(841..2475)
                     /locus_tag="ACFMWP_000845"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFC5891473.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2545..2878)
                     /locus_tag="ACFMWP_000846"
                     /pseudo
     CDS             complement(2545..2878)
                     /locus_tag="ACFMWP_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221902.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2878..3984)
                     /gene="serC"
                     /locus_tag="ACFMWP_000847"
     CDS             complement(2878..3984)
                     /gene="serC"
                     /locus_tag="ACFMWP_000847"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HFC5891474.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGATVVIIRED
                     LLERCPNDIPDVFNYRSHLNREGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KTVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4349..4780
                     /gene="rimP"
                     /locus_tag="ACFMWP_000848"
     CDS             4349..4780
                     /gene="rimP"
                     /locus_tag="ACFMWP_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HFC5891475.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4808..6310
                     /gene="nusA"
                     /locus_tag="ACFMWP_000849"
     CDS             4808..6310
                     /gene="nusA"
                     /locus_tag="ACFMWP_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HFC5891476.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6322..9210
                     /gene="infB"
                     /locus_tag="ACFMWP_000850"
     CDS             6322..9210
                     /gene="infB"
                     /locus_tag="ACFMWP_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HFC5891477.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLHIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARSL"
     gene            complement(9422..10816)
                     /locus_tag="ACFMWP_000851"
     CDS             complement(9422..10816)
                     /locus_tag="ACFMWP_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HFC5891478.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(10890..12230)
                     /locus_tag="ACFMWP_000852"
     CDS             complement(10890..12230)
                     /locus_tag="ACFMWP_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HFC5891479.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRDTLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQ"
     gene            12373..12999
                     /locus_tag="ACFMWP_000853"
     CDS             12373..12999
                     /locus_tag="ACFMWP_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HFC5891480.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYVVMGWMVLAVMKSLTASLPLAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(13063..14481)
                     /locus_tag="ACFMWP_000854"
     CDS             complement(13063..14481)
                     /locus_tag="ACFMWP_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC5891481.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            14808..15536
                     /locus_tag="ACFMWP_000855"
     CDS             14808..15536
                     /locus_tag="ACFMWP_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HFC5891482.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15595..16083)
                     /locus_tag="ACFMWP_000856"
     CDS             complement(15595..16083)
                     /locus_tag="ACFMWP_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HFC5891483.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16841..17305)
                     /locus_tag="ACFMWP_000857"
     CDS             complement(16841..17305)
                     /locus_tag="ACFMWP_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HFC5891484.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4558 a         4846 c         4371 g         3570 t
ORIGIN      
        1 cttctgattc cccgataccg atgccgtctg aaccttcaga cggcatgaga cctttgcctg
       61 cgcacttggt gcgctggtcg cctccgaaca tggcgcgaca cccgacattt ccgccgaacg
      121 catcgggcgt ttcatgaatc cggtttaaaa cgcatggaaa aatgccgtct gaaagccttt
      181 cagacggcat tgtgcttgag attccgttta ccaatggctg acaaacgctt ccaaatcggt
      241 attcttgggc ttatgcactt cctctgtcgg cgtgccgacc atcatcagcc cgatgatttt
      301 atccttatcc gcacaaccga aagcctcccg caacaagggg ctgttgaccc acatccccgt
      361 aatccagaca ttgtcgaatc cctgagccgt tgccgccagt tgcagcgcat acgccgcaca
      421 acccgccgtc agcatctgct cccattccgg tttcggctta ggcacatcac gattcggcgc
      481 aaacgttacc ccgatgacca tcggcgccat attgcccact ttttccgcct ttttcatcgc
      541 atcgtcgccg aaattcaatt cggcaaccgt ttgctttaac acatcgcgaa aacgttgcaa
      601 tcctacctcg ccttgaatca cggtaaaacg gaaggggcgc atattgccgt gatcgggaac
      661 ttgggttgcc gcctgaaata tttgttccaa ctccgccgca tcgggggcgg ggggcttcag
      721 ctttttggaa gatcggcggt tcgtcaataa ttttaaagca tccatatcgt tatactccgg
      781 tcatcggtcg ggtgttcgga cacatatgcc gtccgaaggc ttcagacggc atatccggca
      841 tcagcgcgga cggcggcagg ctgccaatat atccatttcc ttccgatagg tttggctatt
      901 ggaaatgtcc atcagcccca ataccgtgct gaaatagtgg tcgtgcgaat attcgttttc
      961 cgccgctttt tgtttgaggc attggaaatc tatgcccccg tgttggcgga aggctttgga
     1021 aaaccacata accatcggga tatgcgtctg cccggaaggc gcgatggcgt aaggcgcggc
     1081 gtgcaggtac atcccgtttt cgcccaaact ttcgccgtgg tcggaaacat aatgcaccac
     1141 gctttccaaa tcgtcgcggt tttcaagttt gcggataacc ttgtcgataa actggtccac
     1201 atacaaaacc gtattgtcgt aagtgttgac cagcgtggcg cgggtgcatt tgttgatttc
     1261 gttggtgtcg caggtcggcg tgaatttgcg ttcggcttcg gtatagcgtt cgtaatacgt
     1321 cggcccgtgg ctgccgatgg tatgcaggat taaaaccgcg tctttatcgt ttttgttgag
     1381 gacttcgtcg aacttagtca gcaggatatt gtcgagacac tcgccgttgc ggcagtattc
     1441 gggcaggttg agcgaggtaa cgtcggtatt cggcactttg ccgcacacgc ccttgcagcc
     1501 ggaatcgttt tccaaccagg taacttccac gccggcgcgc tgcacgatgt ccagcaggtt
     1561 gtcttggtgt tcggctttga tttcgtcata atccgtgcgg tcgaaggttg agaacataca
     1621 cggcagggag tgcgcggtcg atgtgccgca gcttctgacc tgcgggaaat tgacaatttc
     1681 atcgccgcgc gcggcaagca gcggcgtagt ttggcggctg taaccgttca aaccccagtt
     1741 ggcggcacgc gtggtctcgc ccacgaccag caccacgaaa cggcgcaggc tgccggccgg
     1801 ccggttttgc acgaccgcca tatccaattg cgtataagga atattggaac gcttccaatc
     1861 tttgtatttc gacacgcccg cgccgatgaa attagatggc acaatcagat gggttactga
     1921 tttattgttg cggaaaaacg aggcgtaatc ctgatattgc aacattgcga tgcccaacgc
     1981 gcacaaaaag gaaacggcgg caagcacaag gcgcgtcaaa agctccttat accaaacgcg
     2041 gtatttaacc ttgacggcga tatacgccag cgcgggcaat acgcccaaac atacaatcca
     2101 cagcacatag cccggcgtaa tcaggcgcgc gctttcggca gccgtagttt gcaagacatt
     2161 attcaacatc gacttgttga aatagatatt gaaaaatatt tcttggtaag acaccgccgc
     2221 actgataacc aatatcaacg gaatcaatac cttatgcacg aaaggcaggg caatgacgtg
     2281 aaaaacgaaa ttacttaaaa aaaacagcac caccggcatc gtatagagga agatatccgc
     2341 cccggtgccg ttaaaaggat gaagctcgac aactttggca aaaaaggcgt aattcaatac
     2401 cagcgaggaa tacagggaaa ggaaggcaat cagcgcggaa gagccgagct tcggcctcag
     2461 gttcggtttt atcatttgga atgtgtcgga taagggttgg aaaaggcatc cggcatttgg
     2521 aatccggatt attgaaaaag attcttaatt ataaggcaac ggagcaaagc agggcaagaa
     2581 aacggcggct gtgcgggggg ttccgcccgc cattcaaacg tccggcagac ataaaaacat
     2641 cgtaagcaag attcgaaccg gtctgcaacc gcccctgcca gaaaaacggg caaagcattt
     2701 catattggaa aaacccggcc gcgccgccga cgggacagtc cggcacaaac agcatcacgc
     2761 tcggattgaa aaggacggat agccgccggc agcacaatct taccacctcc aaaacgccgc
     2821 cggagaacgc cgaaacagcc gatgccgtct gaagccgctt cagacaacat cgggacatca
     2881 accgtaacgc cgttggaaat cgcgcataaa atccgccaaa gcccgcacgc cttcaagcgg
     2941 catcgcatta taaatgctgg cacgcatacc gccgacggtt ttatagccct taagcaggca
     3001 caagccctgc aattcggctt ccagcacaaa acggcggtca agctcctcat cccccgtttg
     3061 gaacacgaca ttcattttag aacgcgcatt cggacggata cggttgatat agaaaccgcc
     3121 gctgccgtct atcgtctcat acaaggtttg cgccttcagc cgattgaccg cttcaatttt
     3181 tttcacaccg ccctgcgcct gcagccagcg gaacaccagc cccgacatat aaatcgcgta
     3241 agttgacggc gtgttgtaca taccttcgcg gttcaaatgc gaacggtagt tgaacacatc
     3301 gggaatatcg ttcggacaac gctcgagcaa atcctcacgg ataatgacca cggtcgcacc
     3361 ggccgggccg atgtttttct gtgcgcctgc gtaaatcagt ccgtagtcgg caacatcaaa
     3421 ctcgcgcgac aaaatctcgc tggacatatc gcacaccagc ggcggcatgc cttctgaaag
     3481 gcgcggcact tcacggtatt gcagcccgtt gaccgtttca ttgacggcaa aatggacaaa
     3541 cgccgaatcg ggtgcaacat cccacgtttc cacaggcggc aggtcgagat agtcgaactg
     3601 ctcgccgcca tgcgccgcca aacggatttc cgtatcggtc aaacggctca tctgttcata
     3661 agcgatacgg ctccagttgc ccgttaccac cgcgtcggca gtgcggaaac cgtgtgccag
     3721 attcatggct gccatattaa attgggttgt tgctccaccc tgcagaaaca atatcttata
     3781 gttgtcaggc actttcaaaa gctgcctcaa atcctgttcc gcatgatgca ggatgctcaa
     3841 aaacatttcc gaacggtggc tcatcgccat cacaggaaaa cccgtaccgt tgtagtccaa
     3901 catttcctgc cgcgccgttt ccaacacggc ttcgggcaat acggcagggc cggcggaaaa
     3961 attgtaaatc ggataaagag acataatgca gccttgattc tgaacaataa cccgcccgat
     4021 tttaggcttg cagcaggctt tgtgcaagga tgggaaatac ctgtcctccg ccccgcttca
     4081 tgccgcccga acacggaaaa caacatcaat atattgattt acaaatataa aaatcatgct
     4141 agcgacaaat agatacattt gttttgtcaa caatattcac gatttcccat tacaaacctc
     4201 ccttacaccc gcttttttcc gtcccaaaaa cacaaaataa atcaacactt tcatttctcc
     4261 gcaaaagcgg ttataatcac gccgattttt caactttgac gaaaaatggc cacggggcca
     4321 tttttttatt atgtacatag ggagcagcat ggatatccaa accatcctcg aaaaaaccct
     4381 gcccggcctg ggctacgaac tggtcgattt cgaactgacc gcgcaaggaa cattgcgcgt
     4441 gttcatcgac aaagaaagcg gcattaccgt cgaagactgc gcaaccgtca gcaaccactt
     4501 gagccgcgtc ttcatggttg aagacatcga ctacaaaaac ctggaaattt ccagccccgg
     4561 actcgaccgc cccttgaaaa aagccgccga cttcgtgcgc tttgccggtc agaatgccaa
     4621 aatcaaaacc cgcctgccga tagacggtca gaaaaacttt atcggtaaaa tcgaaggctg
     4681 cgaaaacgat accgttaccg tatccttcga cggcaaaacc gtacaaatcg aattgggcaa
     4741 catcgacaaa gcccgtctgc gccccgaatt caaattctaa aacacaacaa tattggagat
     4801 gttcaaaatg agtcgtgaaa tgttacagct ggcagaagca ctggcaagcg aaaaaaacgt
     4861 tgatgcggaa gtcgtcttcc aagcactgga attcgccctg tctaccgccg ccaagaaaaa
     4921 ggcagaccgc gaacacatgg acgtgcgcgt ccaaatcaac cgcgacaccg gcgaatacca
     4981 aaccttccgc cgctggctga ttgtcgccga tgaagactat acctatcccg atgtcgaaaa
     5041 aaccatcgag gaaatccaag aggaaattcc cggcactacc atccaaatcg gcgaatacta
     5101 cgaagagcag ctgcccaacg aaggcttcgg ccgccaagcc gcgcaaaccg ccaaacaaat
     5161 catcctgcaa cgcatccgcg atgccgagcg cgagcagaat ctgaacgagt ttctcgccgt
     5221 caaagaagac atcgtgtccg gcacggtcaa acgcgtcgaa cgccacggca tcatcgtcga
     5281 agtcgttgcc ggcaaactgg acgcgctgat tccgcgcgac caaatgattc cgcgcgaaaa
     5341 cttccgcagc ggcgaccgca tccgcgccct cttcctgcgc gtcgaagaaa tcggcaacac
     5401 cggccgcaaa caagtcatcc tgagccgtac ttccggcgat ttcctcgtca aactgtacgc
     5461 caatgaagta cctgaaattg cagacggcat gcttgaaatc cgcgctgtcg cccgcgaccc
     5521 gggccagcgt gccaaagtcg ccgtcaaagc caacgaccag cgcatcgatc cgcaaggcac
     5581 ctgtatcggc gttcgcggtt cgcgtgtcaa tgccgtcagc aacgaattgt ccggcgagcg
     5641 catcgacgtt gtcctttggt cgcccgagcc tgcccaattc gtcatgagcg cgctctcacc
     5701 cgccgaagtc agccgcatcg tcatcgacga agacaaacac gccgtcgatg tcatcgttgc
     5761 cgaagaccag ctcgcgctcg ccatcggacg cggcggtcaa aacgtgcgcc ttgcttccga
     5821 cctgactggc tggcagctca acatcatgac ttccgccgag gcagacgaac gcaatgcggc
     5881 agaagatgcc gccatccgcc gcctgtttat ggatcacttg aacgtggacg aagaaaccgc
     5941 cgacgtactg gttcaggaag gttttgcaac cttggaagaa gtcgcctatg ttcctgccgc
     6001 cgaactgctt gccattgaag gatttgacga agaaatcgtc gatatgctcc gcaaccgcgc
     6061 ccgcgatgcc atcctgacca tggcgattgc cgccgaagaa aaactgggcg aagtgtccga
     6121 cgatatgcgc aacctcgaag gcatagatgc tgatatgctc cgcagccttg ccgaagcagg
     6181 cattactacc cgcgacgact tggcagagct tgccgtggac gaactgattg aaatcaccgg
     6241 tgtaaacgaa gaaaccgcaa aagccgtcat cctgaccgca cgcgaacact ggtttaccga
     6301 agacaaataa agggggtaca gatgagtaac acaaccgtag aacaatttgc cgccgagctg
     6361 aaacgccccg tcgaagacct gttgaaacag ttgaaagaag ccggcgtcag caaaaacagc
     6421 ggcagcgatt ccctgacgct ggacgacaaa cagcttctga acgcctacct gaccaagaaa
     6481 aacggcagca acggcggcac catcagcatc cgccgcacca aaaccgaagt cagcaccgtt
     6541 gacggcgtaa aagtcgaaac acgcaaacgc ggacgcactg tcaacattcc ttctgccgaa
     6601 gagttggcag cacaggtaaa agccgcccaa acccaagccg cacctgtccg gccggagcag
     6661 acggcagaag acgcggcaaa agcccgagcc gaagctgccg cacgtgcaga agcccgtgcc
     6721 aaggcagaag cggaagcggc aaaactgaaa gcggcaaaag caggcaacaa agccaaacct
     6781 gccgcgcaga aacccaccga agcaaaagcc gaaaccgcac ccgttgcggc ggaaaccaaa
     6841 cccgccgaag aaagcaaagc ggaaaaagcc caagccgaca aaatgccgtc taaaaaaccc
     6901 gccgagccca aagaaaaagc cgccaagccg aaacacgagc gaaacggcaa aggcaaagat
     6961 gccaaaaaac cggcaaaacc tgccgcacct gccgtgccgc aacccgtggt cagcgcggaa
     7021 gaacaggcgc aacgcgatga agaagcacgc cgcgccgccg cacttcgcgc ccaccaggaa
     7081 gccctgttga aagagaaaca ggaacgccag gcacgccgcg aagccatgaa acaacaggca
     7141 gaacaacagg caaaaaccgc acaggaagcc aaaaccggca gacagcgtcc cgccaaacct
     7201 gccgagaaac cgcaggcagc cgcgccggcc gtcgaaaaca agcctgtcaa tccggcaaaa
     7261 gcgaaaaaag aagaccgccg caaccgcgat gacgaaggtc aaggccgcaa cgccaaaggc
     7321 aaaggcggaa aaggcgggcg cgaccgcaac aatgcacgca acggcgacga cgagcgcgta
     7381 cgcggcagca aaaaaggcaa aaaactcaaa ctcgagccga accaacacgc cttccaagca
     7441 ccgaccgaac ccgtcgtaca cgaagttttg gtgcctgaaa ccattaccgt tgccgacttg
     7501 gcacacaaaa tggcagtcaa aggcgtggaa gtggtcaaag ccctgatgaa gatgggcatg
     7561 atggttacca tcaaccaatc catcgaccaa gacaccgccc tgattgtcgt cgaagaactc
     7621 ggacacatcg gcaaacccgc cgccgccgac gatcccgaag ccttcttgga cgagggcgcg
     7681 gaagcggtgg aagccgaagc attgccgcgt ccgcccgtcg ttaccgtcat gggccacgtc
     7741 gaccacggca aaacctcgct gctggactac atccgccgta ccaaagtggt acagggcgaa
     7801 gcaggcggca ttacccaaca catcggtgca taccacgttg aaaccccacg cggcgtgatt
     7861 accttcttgg atactccggg tcacgaagcg tttaccgcca tgcgtgcgcg cggtgcgaaa
     7921 gcaaccgata tcgtgattct tgtggtcgcc gccgacgacg gtgtgatgcc gcaaaccatc
     7981 gaagcgattg cccacgccaa agcggcaggc gtaccgatgg tggttgccgt caacaaaatc
     8041 gataaagaag ccgccaaccc agagcgtatc cgccaagagc tgaccgcaca cgaagtcgtg
     8101 cctgacgaat ggggcggcga tgtacagttt atcgacgttt ccgctaaaaa aggcctgcac
     8161 atcgatgcat tgctcgaggc agtcttgctc gaagccgaag ttttggaact gaccgcacct
     8221 gtcgatgcac ctgccaaagg tatcatcgtt gaggcgcgct tggacaaagg ccgcggcgcg
     8281 gttgccacat tgctggttca aagcggcacg ctgaaaaaag gcgatatgct gctggccggt
     8341 acggcattcg gcaaaatccg cgcgatggtc gatgaaaacg gcaaatccat taccgaagcc
     8401 ggtccgtcca tccccgtcga aatcctcggc ttgtccgacg taccgaatgc gggtgaagac
     8461 gcgatggtat tggcggacga gaaaaaagcg cgcgaaatcg ccctcttccg ccaaggcaaa
     8521 taccgcgacg tgcgccttgc caaacagcag gcggcgaagc tggaaaatat gttcaacaat
     8581 atgggcgaaa cccaggccca atccttgtcc gtcatcatca aagcagacgt gcagggctct
     8641 tacgaggctt tggcgggcag tctgaaaaaa ctgtccacag acgaagtgaa agtgaacgtg
     8701 ttgcacagcg gcgtgggcgg cattaccgaa tcggatgtca accttgccat cgcgtccggg
     8761 gcgttcatta tcggctttaa cgtgcgtgca gatgcctctt cgcgcaaact tgccgaaaat
     8821 gaaaatgtgg aaatccgcta ctacaacatc atctatgatg ccatcgacga cgtgaaagcc
     8881 gccatgagcg gtatgctttc cccggaagag aaagaacagg ttaccggtac ggtcgaaatc
     8941 cgtcaggtca tctccgtttc caaagtcggc aacattgcag gctgtatggt taccgatggt
     9001 gtggtcaaac gcgattccca tgtccgcctc atccgcaaca acgtggtcat ccacacgggc
     9061 gaactggctt cgttgaaacg ctataaagac gacgtaaaag aagtccgcat gggctttgag
     9121 tgcggtctga tgctcaaagg ctacaacgaa atcatggaag gcgaccaact ggaatgcttc
     9181 gacatcgtcg aagttgcccg cagcctgtaa ttcctttgca aataaaatgc cgtctgaagc
     9241 gttcagacgg catacgaaac gggttctgta tcatacagaa cccgtttttt gtcgcaaatc
     9301 ggcttcagac agccctcttg ccttatcccg atttgaatct gacttgccat acaaacaggc
     9361 ttcagacggc attatagtga attaaattta aaccggtaca gcgttggctc gccttgccgt
     9421 actatttgta ctgtctgcgg ctcgccgcct tgtcctgatt taaatttaat tcactatatt
     9481 ttcccgacag gcggatttga agtttctcca catatccggc gcgttcggcg cggctggttt
     9541 cggggcggtg cgtattgagc gacgaccatt tccaatgact gcgggctttg ttgagttcgg
     9601 gcgggagtct ggcggcgtcc cacggggctt tgcggctgtg caactcgata tccgattgtg
     9661 ccgcgtgtcc gcgcgtttgc aggacgtgga gcagatcgag ggcgcgggcg gcgagcaggg
     9721 tcagggtttc agggtcggtg tgcaaggttt ggcggccggc gagtttgtcg gaaatggtgc
     9781 gggtattggg caggatgccg cccaaaaagc cgccgattgc cgtacccaat ccgagcgagc
     9841 cgccgagtgt ggcgatgtcc agccccaagc cgatgagtgc gccggttgcc gcgcccgtgc
     9901 cggtgcggat gccgtattgt ttgagcaatt cgctgtcgaa cgggtcttgg cggaaggctt
     9961 gcggcatcca gtcgccgccg tcgatttcgc tgtggtagaa acggtagagg gcaaacagcc
    10021 gctgctgcat ctgccgttcg agttggcgta tttccgcctg catggtttgt agcacggtgg
    10081 cggtatcctc gttttcgtcc acttcctgcc tgaaggcggc ggcatcgagc aggaaatcgg
    10141 cgatttcgcg gcgcgcttcg ccgtccagcc gctgccattc gcgccggcgc atggctgtca
    10201 ggcggtcaag tgtgctgcgt tcgggcaaca tggtggcgag gttttcccac aggcgtagtt
    10261 cgccttcaaa atcaaaggcg acggtgtcga accctgcgaa aacgtgcagg tttctcctcg
    10321 ccagcatggt tgtccacgat tcgggaagct gtccgccggt aaagttgaac acgggcataa
    10381 ctggtttggc acaccatgaa aggatggtca attcatcccg atatttgtcg aggacgggct
    10441 cgcgcgcgtc gatgacgtac attgccatat cgctttgcaa gacttgccgt aagactttgg
    10501 cttcctgatt gaaatcatgg tgcgcgccgt ggctgccgag aaactgttgc agccgttcga
    10561 tgccgtctga acgattgtcc gtatggtttt ccagccattc cagcacgccg cccgcgtctt
    10621 caagtccggg cgtgtcgtac aggaaaacca gcgtgtctgc gccgtcgctg atggcggctt
    10681 cttcgacatg gcgtgtggtc gatggggcgt ttctgacttc gccgaaaccg ctgtcgcgca
    10741 acagggtacg aaggagcgag gttttgccgg tattggtatg cccgacgacg gcgagggaaa
    10801 ggggttgttt gttcatgatg tttttgaaga atggattttc agacggtctt ttttcagaat
    10861 ggcggcttaa cagaacattt caagtgagtt tattggtctt tcaaacgccc ttcctgcgcc
    10921 gccctgtcag gctcaagcca cgccgcgccg cattcggcca gcgcgttacg ccaatgttcc
    10981 agcttttccg aaaggtcgtc tgaaagcccc tgttccgcca aaagctgcac caccgcgccg
    11041 ccctgcgccg cttccgaaag tcggacgatc tgccgcaaca cgccgcggtc gggcacagtt
    11101 tgggcgcgca cgccgataag cagttgcgcc ggtttctgct tcagctctgt ctccagcgcg
    11161 gcaacctgtt cccgattggc ggcaacgccc ttatccagcc attcctgcgc cagcctgccc
    11221 tcgaaccatt cgccgtcctg ccattcggtc tccagcatga ccgcccattt cggcgcatcg
    11281 ttcaagacga ttttcggcga aacggcggac acggtttccc gacgcgtatc cgcatcggtg
    11341 attttgttct gccagcggcg gatgaccgcc tgataatagg gtttttccaa atccaatccg
    11401 ttttcgcttg ttttcaaaag gattttgcat accgcccaag ccaagaggcg cggcaggatg
    11461 ccgtagcagg cgatactgcc gaccagcagc cccgaccaag cccgcgcatc ggcaatattg
    11521 ccgttcagac ggccttcgat gaccgcccgc gcatcaggca cgggaaaacc cagtttcgca
    11581 ggcagccatg ccaacatttc caccagccgt accgaagacg aatcgcccaa cagcgtgctt
    11641 tcccagttga acgtatattg ccgcaccaaa agcagcaaca ataccgacac cagcattccg
    11701 agcagcgtgc agagccacag gctgtgcgac gttgcgccta ttttccaacg taccgaaggt
    11761 tgccgccact cgtccgcata cagccgcaac accgcctgat ttacagggtc tttgccccga
    11821 aaccacgtcg ccggactgct gaaaaaacgc cccactttca cgcgcaggaa caacattgcc
    11881 aaccatactg ccagcatcag cgtattcatg cccaacacgc ccgccaaaac caaaaagaaa
    11941 ttcagaccct gattgtccat tagaagataa gtgcctgaaa aaccggtaaa aaacgcaaac
    12001 gtcgccgccg ccacccacaa ccagaacgac cccgcacgca cacgttccaa tgtgtcccgc
    12061 agcatacggt tcctgtcgat catctccgcc cgacggatga ttttttcctc cgtactgccg
    12121 tccacgcggc gcaaagcctc cgtcgcctgc acgggatcgc cgctgaaaat aaaaccgcct
    12181 tcgtccaaaa tacggatcag ctcaaccagt tttcgggatg gattcaacat aaaatgccgt
    12241 ctgaaaataa aaaacagatt ttaacacacg cattttcaag aatattcaca gtgtaggcaa
    12301 agagtaaatc tcacacagaa gcaaaagtat cggcgtaaac tgactgcctc tactttcccg
    12361 aaagattgtg cgatgtatac aggcgaacgc ttcaatactt acagccattt gagcggtttg
    12421 attctggcgg cggcaggttt ggcgctgatg ctgctgaaaa ccataggaca cggggacggc
    12481 taccgtatct tcagcgtatc ggtttacggc atcagccttc ttctgctcta tttgagttcc
    12541 tcgctgtacc acggaattgc agccggaaaa ctgaaaagca ttttgaaaaa aaccgaccac
    12601 tgcatgattt atgtgctgat tgccggaagc tacacaccgt ttgcactggt ttctttgaga
    12661 aacgggccgg gctggacggt attttcactg tcctggctgc tggcggctgc aggaatcgca
    12721 caagaactca ccatcggacg gaaaagcgaa aaacgactgc tgtctattgc gatttatgtc
    12781 gtcatgggtt ggatggtctt ggcggtaatg aaatccctga cagcctcact cccgctggca
    12841 ggactggctt ggctggcggc aggcggtatg ctgtacagcg tcggcattta ctggtttgta
    12901 aacgatgaaa aaatccgaca cgggcacgga atctggcatc tgttcgtatt gggcggcagc
    12961 atcacccaat ttgtcagtgt gtacggttat gtaatctgaa tgccgtctga aaagcaaaac
    13021 ctcccgatcc tgaagattgg gaggttttct gtttgccgga catcagccct tgtcgtggaa
    13081 ctcgtgaaat tcatactgat aggacaaatc ccgacccgct tttttctgtg ccaaataatc
    13141 atcataaatg gcacggattt ccttacgcaa caaaaacagg gctatcaagt tcgggataac
    13201 cataaagccg ttgaacatat cggacaggct ccaaaccaaa tcgactttgc cgagcgtacc
    13261 caaaacgatg gcaagcagaa ccaatgcgcg atagatgccc aagtgtcttc ccctgaaaag
    13321 aaaacggatg ttggactcac cgaaataata ccagccgata atggtcgtca aggcgaaaaa
    13381 ggtcagacac acggcaagca attgcgaacc gaagcccgga aatgccttgt taaaggcaaa
    13441 ctgggtaacc gccgcgccct gttcgcccga aaggttggca tcagtcagca ggataatcaa
    13501 tgccgtagcc gtacatacca aaatcgtatc gataaacaca ccgacaaatg ccgccatacc
    13561 ttgctgcaca ggatgcttca catcagcggt tgcatgtgca tgcggggtag aacccatacc
    13621 tgcttcgttg gaaaacagac cgcgcgccac gccgaaacgt atcgcttcac gcataccgat
    13681 acccgcagca ccgcccaaaa cggcttcagg attgaaggcg gcggtaaaga tgtggttgaa
    13741 catcggcaca atatagtcgg aaaattcaaa caggataacg acggcgcaca aaatataaac
    13801 aaccgccata aacggcacga caaactgggc aatattggca atacggttca cgccgccaat
    13861 cacaaccatg cccgcaagga cggcaagcac aataccgact gccaaagaag gcacatcaaa
    13921 tgcaatggta acggcagaag caatggagtt tgcctgtgtc gcattaccga taaagcccaa
    13981 tgcgataatc aacgcaatgg agaaaaagcc cgacaggaaa cgcgccgcgc ccctgccgat
    14041 tttcggagtc agaccgtgcg taatataaaa cgccggccca ccgatgtatt tgccgtggct
    14101 gacgacgcgg tatttctgcg ccagcagtgc ctccgcaaaa atcgtggaca tccccaaaac
    14161 ggcagaaacc cacatccaaa aaatcgcgcc cggcccgcct gcggtgatgg cggtcgccac
    14221 gccggcgacg ttgcccgtac cgatttgcgc ggatatggca accgccaacg cctgaaactg
    14281 cgataaagac ttatcgtctt tatcgccttt ggcaaacaag ccgccgaata cagatttgaa
    14341 tcccgcaccc agcttggtaa tctgcggcgc accgagatac agcgtaaaaa acaggccgat
    14401 acccaaaagc gcgtaaatca gcaggtagtc ccaaaggaac cgattgactg tacccaccag
    14461 aacagacaat atattttcca taaaataaac cttatcttac aattaaaatg actgccttcc
    14521 aaaagacatt ccaataagga aacacggcga gcagaccgta tttgccgcaa cagatgcctt
    14581 aaattgtcaa caatcgggga gaagctgcgc catcataccg taaaatatcg ttaattaaaa
    14641 catttcttta tttttaagcg gaaagcggag gaaatcgctt tcagacggca tcgacaacgg
    14701 cacggcataa aacaggatat tttgggtact tgcaacttat gttaaaatgc cgaccgtaaa
    14761 aaatctgaca aaaacagatt aattatttga aataagaaag gaaatttatg gcaggtcata
    14821 gcaagtgggc gaatatccag cataaaaaag cccgtcagga tgccaaacgc ggcaaaatct
    14881 tcacccgttt aatcaaagaa atcaccgttg cggcgcgtat gggcggcggc gatcccggcg
    14941 caaatccgcg cctgcgcctg gctttggaaa aagcagccga aaacaatatg cccaaagaca
    15001 atgtgcaacg cgccatcgac aaaggcacgg gcaacttgga aggcgtggaa tacatcgaat
    15061 tgcgctacga aggctacggc atcggcggcg cggctttgat ggtggactgc ctgaccgaca
    15121 acaaaacccg caccgttgcg gacgtacgcc acgcgtttac caaaaacggc ggcaacttgg
    15181 gtaccgacgg ctgcgtggcg ttcaacttcg tgcatcaggg ctatttggta ttcgaacccg
    15241 gcgttgacga agacgcgctg atggaagcgg ctttggaagc cggtgcggaa gacgtggtta
    15301 ccaacgacga cggttccatc gaagtcatta ccgcgccaaa cgattgggcg ggcgtaaaat
    15361 ccgctttgga ggcggcaggt tacaaatccg ttgacggcga cgttacgatg cgcgcccaaa
    15421 acgaaaccga actctccggc gacgatgccg tcaaaatgca aaaactgatt gacgcgctgg
    15481 aagacttgga cgacgtgcaa gacgtttaca cttccgccgt attgaatttg gactgatacg
    15541 cagcacagca gacatacaat aaaatgccgt ctgaaccttt cagacggcat tgatttattt
    15601 agcccttgcc cacgcccacc aaaccgtcag gacaaccgcc agaaaatacg ccgcgctcca
    15661 aacaggcaaa gcaaccccta acagataatc cggttcggca caatttccga acccgcgcac
    15721 gacaggctcg aaccaatcaa acaaagacca gcccttcaag cggaacgtcc acggcgcacc
    15781 gcacgaagga gcggttcccg gcggcagcga ctgcaaccac aactgatatg ccgcaacaga
    15841 aatacccgta acggccggaa tgctgataaa gacagcaccg aacaaaccgc ccgcccttct
    15901 tcttggtctg cacatcagga caattgccgt acacaatgcg gttgccaaaa cgcataaccg
    15961 ctgactgata cacaaaacgc aaggctccat acccaaaaca tactgtgccg ccaaagaacc
    16021 ggcaaatgca cagaccgaaa cggcaaacag cagccaaacg gcttttctaa ataacggggt
    16081 cattttctca acacaccaat caaaataccg atatgccgat tttgctggat atatcccgag
    16141 atggcaaggg acgaatcgac accggcgcag gtgcggacga tttcggtttt cccgatatac
    16201 acaagacctg acaagggaca aaacggcgat ttgcccgcac aatgcccgca aaaaaataca
    16261 tccggaggat ttgaatttcg gcaaatttag cgaatcaaaa gtttatttca atgaaattat
    16321 atgatttttt tgaataagcg gattgacagg tttttgaagg aatttgttac cggatagcca
    16381 tcgggcaagt tttttgcaaa atttgaatcg gtcgggtaaa ttttcaaaaa ataattgaca
    16441 gcggataaga aacggcggat aattcccgcc gtcgagttgc ttgatgcagc ttgatttttc
    16501 tcctctattt ctcctttgta gacttggcac acattcaact ggatgtgtgc atttttttat
    16561 ctccgctttt tttgaaattt aattactttt attgtttgaa attccattct ttaagaaatt
    16621 taacaagaaa aacgcttgct ttttgaccgg aaaagctgca taattcgttc cgttagctgg
    16681 ttcgagtagt cagttaatag tttctcctct atttctcctt tgtagacttg gcacacattc
    16741 tattgaatgt gtgcattttt ttatctgaag caacaagcct ctgtgcgtga tgttgttatg
    16801 tttcatttag gtgtcaaacc gcatacccgg tctgaaatat tcaatccaaa tccaaaaccg
    16861 gattttcttt gacctcctcc atcacaacat aactcctact ctccgaagcg gcaggcagtt
    16921 gcaataggat attgcctagc atatcccgat aggcagacat atcgggcaaa cgtactttaa
    16981 tcagatagtc gtattcgccc gacaccaagt ggcattccat aatttgcgga attttcagca
    17041 cttctttttt gaaatcttcg aaaatattgc ccgatttgga ttgcagcttc agctcgacaa
    17101 aaaccaatag cggtttgccc aacagatggg gattgaggtg ggcgtgatag ccggaaatat
    17161 aatgttcccg ctccaaacgg cgcaccctct ctgtaacggg cgtggtggac aagcctacct
    17221 tctcggcaag ctccgtcatc gggatgcggg cattctgttg gaggatctta agaatgcgga
    17281 aatcgatttt atctagttct ttcatttgga ttgccttgta tttattattg attttaacaa
    17341 ataga
//
LOCUS       DAXHKG010000034        16944 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.034, whole genome shotgun sequence.
ACCESSION   DAXHKG010000034 DAXHKG010000000
VERSION     DAXHKG010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.034"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACFMWP_000858"
     CDS             complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACFMWP_000858"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HFC5891485.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1403..1513)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1566..2462
                     /locus_tag="ACFMWP_000859"
     CDS             1566..2462
                     /locus_tag="ACFMWP_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC5891486.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACFMWP_000860"
     CDS             complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACFMWP_000860"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HFC5891487.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALAFAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLKT
                     GREAGAFNVRPRWPLSEIVK"
     gene            complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="ACFMWP_000861"
     CDS             complement(3686..4873)
                     /gene="ccsB"
                     /locus_tag="ACFMWP_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HFC5891488.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEEKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4866..6818)
                     /locus_tag="ACFMWP_000862"
     CDS             complement(4866..6818)
                     /locus_tag="ACFMWP_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HFC5891489.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTVSREGGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7095..7718)
                     /locus_tag="ACFMWP_000863"
     CDS             complement(7095..7718)
                     /locus_tag="ACFMWP_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC5891490.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7924..8553
                     /gene="yihA"
                     /locus_tag="ACFMWP_000864"
     CDS             7924..8553
                     /gene="yihA"
                     /locus_tag="ACFMWP_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HFC5891491.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPKEN"
     gene            complement(8674..11070)
                     /locus_tag="ACFMWP_000865"
     CDS             complement(8674..11070)
                     /locus_tag="ACFMWP_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HFC5891492.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVQKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLEAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11222..12337
                     /gene="pilM"
                     /locus_tag="ACFMWP_000866"
     CDS             11222..12337
                     /gene="pilM"
                     /locus_tag="ACFMWP_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HFC5891493.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12340..12939
                     /locus_tag="ACFMWP_000867"
     CDS             12340..12939
                     /locus_tag="ACFMWP_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HFC5891494.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKVEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12940..13587
                     /locus_tag="ACFMWP_000868"
     CDS             12940..13587
                     /locus_tag="ACFMWP_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HFC5891495.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13605..14150
                     /locus_tag="ACFMWP_000869"
     CDS             13605..14150
                     /locus_tag="ACFMWP_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HFC5891496.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14169..16454
                     /gene="pilQ"
                     /locus_tag="ACFMWP_000870"
     CDS             14169..16454
                     /gene="pilQ"
                     /locus_tag="ACFMWP_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HFC5891497.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQATAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4567 a         4817 c         3863 g         3697 t
ORIGIN      
        1 aaaatgccgt ctgaactgtt cagacggcat ttttgatttt caaaccggaa ttacagcccc
       61 gctgccgccc tcaatgcagc agctttgtcg gtgcgctccc aagtgaactc aggttcttcg
      121 cggccgaaat gtccgtaagc ggcggattta ctgtaaatcg ggcgcaagag atcgagcatt
      181 tggacgatgc ctttggggcg caggtcgaaa tgttcgcgaa ctaaggtaat cagtttttcc
      241 tcgctgattt tgcctgtgcc gaaagtgtcg atggaaatcg aagtcggttc ggcaacgccg
      301 atggcgtagg aaacttggat ttggcattgg gttgccaaac cggcggcgac gatgtttttc
      361 gcaacgtagc ggcaggcgta agcggcggaa cgatccactt tggacgggtc tttgccggag
      421 aacgcgccgc cgccgtgcgg agccgcgccg ccgtaggtat caacgatgat tttacggccg
      481 gtcaaaccgc agtcgccttg cgggccgccg atgacgaagc ggccggtcgg gttgatcagg
      541 tatttggttt cgtcggtcag cagttcagac ggcaggacgg gcttgataat ctgctcaatg
      601 acggcgtttt tcaactcttc ataaccgatt tccgggtcgt gttgcgtaga gaggacgacg
      661 gtatcaatgc gttttacttt gccggattcg ctatcgtaaa ccacggtcag ttgggctttt
      721 gcgtcgggac gcagccaagg caggaggccg tctttgcgta attcgctttg acgctgcatc
      781 aggcggtggc tgtaatagat ggcaaacggc atcagggtcg gggtttcgtc gcaggcatag
      841 ccgaacatca aaccttggtc gccagcgcct tggttcaagt caatgccttc gccttcgttc
      901 acgccttggg cgatgtccgg agattgctgg tcgtagtaca cgccgaccgc gcagccgttg
      961 gcatcaaagc ccagctcgga ggagttgtag ccgatgcgtt tgatggtttc gcgtgcgact
     1021 ttgatgtagt ccacttgggc ggtggtggtg atttcgcctg ccaatacgca caagcctgtg
     1081 ttgaccaaag tttctgcggc gacacgcgct ttggggtctt gcgccaagat ggcatccaaa
     1141 atcgcgtcgg atacttggtc ggcaactttg tccggatggc cttcggatac cgattcggaa
     1201 gtaaacagat attcgctcat tgagattttc cttgaaaaac aaaccatctt cttcagacgg
     1261 catgttgtat gaacataatg tcgacagcgg gaaatatagc aaaatttccc tattcatacc
     1321 attcagttga gaaatattcc catttgaatg gcactttgga atctctgccc gtacgtttct
     1381 tacaggcaaa aaaattcccg catcaagcgg gtttggattg ctctggtgag ccacatcggc
     1441 ttttcaaccg tccaccttac ttttcctttt gaaaagcagg ttggcatgga attcccaact
     1501 cttaatgcag cgcggatggt agcagaaaag cctttccgcc gcaatacttc cctttttcag
     1561 acggcatgtt tcgtttacaa ttcgggctgt ttcccccttt gcgaaccgcc atgcacatcc
     1621 tgttgaccgc cctgctcaaa tgcctctccc tgctgccact ttcctgtctg cacacgctgg
     1681 gaaaccggct cggacatctg gcgttttacc ttttaaagga agaccgcgcg cgcatcgtcg
     1741 ccaatatgcg tcaggcaggc atgaatcccg accccaaaac agtcaaagcc gtttttgcgg
     1801 aaacggcaaa aggcggtttg gaacttgccc ccgcgttttt cagaaaaccg gaagacatag
     1861 aaacaatgtt caaagcggta cacggctggg aacatgtgca gcaggctttg gacaaacacg
     1921 aagggctgct attcatcacg ccgcacatcg gcagctacga tttgggcgga cgctacatca
     1981 gccagcagct tccgttcccg ctgaccgcca tgtacaaacc gccgaaaatc aaagcgatag
     2041 acaaaatcat gcaggcgggc agggttcgcg gcaaaggaaa aaccgcgcct accagcatac
     2101 aaggggtcaa acaaatcatc aaagccctgc gttcgggcga agcaaccatc gtcctgcccg
     2161 accacgtccc ctcccctcaa gaaggcgggg aaggcgtatg ggtggatttc ttcggcaaac
     2221 ctgcctatac catgacgctg gcggcaaaat tggcacacgt caaaggcgtg aaaaccctgt
     2281 ttttctgctg cgaacgcctg cctggcggac aaggtttcga tttgcacatc cgccccgtcc
     2341 aaggggaatt gaacggcgac aaagcccacg atgccgccgt gttcaaccgc aatgccgaat
     2401 attggatacg ccgttttccg acgcagtatc tgtttatgta caaccgctac aaaatgccgt
     2461 aacgaaaata aaaatgccgt ctgaacaatt tcagacggca ttttgtcatt tgacgatttc
     2521 cgacagcggc cagcgcgggc gtacattaaa tgcaccggct tccctacccg ttttcaaatg
     2581 catcgcgcct gcaaaggcaa tcatggcacc gttgtccgtg cagtatgccg tcggcgggaa
     2641 aaacacgctg actttttcgg acggatgttt cggcttgcct ttgggggtcg ggatttgcac
     2701 cgtcatgttg ccgaaagttt cacggagttt gcggtttgca ccgaccccgc cggcgaccac
     2761 tacggttctg aaccctgtct gcaacagggc ttttttcact ttcgccgcca acacatcgac
     2821 taccgcatct tgaaacgcac ggcagatgtc gttgcgtgtc tgctcaggaa tgtcatccgc
     2881 cccgttttcc gcgcgcactt tctcgacggc agtcaaaaca gcggttttca aacctgaaaa
     2941 actcatctgc aaatcgtcgg aatgaatcat cgggcgcgga aaaacaaacg cttcgggcct
     3001 gcccgattcc gcaagttccg acagtttcgc accgcccgga tacggcaagc ccagcagttt
     3061 cgccgttttg tcgaatgcct cgcccgccgc atcatcgacg ctctcgccca aaagcgcgta
     3121 gtcgcctatg cccctgaccg ccataatctg cgtatgcccg cccgaaacca acagcgcgac
     3181 aaaaggaaag tcgggttttt cctccgccaa cagcggcgac agcagatgcc cttccaaatg
     3241 atggacggga ataacaggct tatccagcgc aaaagccaag gcattggcgt aactcgaacc
     3301 cgccagcaac gcgccgccca aaccgggccc ctgcgtaaag gcaaccgcgt caatgtcgcc
     3361 atacgatgcg cctgcctgcg ccagacagcc ttccgtcaac ggaacaaggc ggcggatatg
     3421 gtcgcggctt gccagctccg gcacaacccc gccgtattcg gcgtgcattg ccatctgcgt
     3481 gtgcagacag tgcgcccgca atcctcgttc ggtgtcatac agcgcaacgc ctgtttcgtc
     3541 gcaagaagat tcgattccca ataccaacat ggtctgatgc cgttaaaaac tgaaaaacgt
     3601 attctagcgg atttcggcac gactgccgta tcccaaaaac ggaacatgcc gtctgaagcc
     3661 cttcagacgg catcgtcgca ccgtatcaaa gcgttccgta agaatgcagc ccgctcaaaa
     3721 acatattcac gccgataaag gcaaatgcgg ttacgaacaa accgataatc gcccaccacg
     3781 ccagcacttt gccgcgccaa ccggcaacca gccgcaagtg cagccaaacg gcgtaattga
     3841 gccagacgat gaacgcccac gtctctttcg ggtcccaact ccaatagcgt ccccaagcat
     3901 ccgccgccca cagcgcaccc aaaatggtgg caatggtaaa gaacagaaag ccgacggcaa
     3961 tcgccttata cataacttcc tcaatcaaca cggattgcgg cagccacgat ttcccgcctt
     4021 tttcttccgc acgcagggaa accagttcgg caataccgag catcgcggaa atgcaaaacg
     4081 cgccgtaacc gataaagttt gccggaacgt ggattttcat ccaccaagat tgcaatgccg
     4141 gaatcagcgg ctggatggta tgcgcctcgc gggacacgct gtaccacaag acaaatccaa
     4201 ccacgaccgc cataaagccg aacacgaagc cgcccaattt ctgtatggcg aacttacctt
     4261 cataataaag atacatcagc gcggtaatca ccaaaaacag gatgaacact tcatacaggt
     4321 tggaaaccgg aatatgcccc gcatcgggac ggagcagata gctttcgtgc caacgtacca
     4381 gcagaccggt aaagcctgct acggcagaca cccatgcaaa cacggttccc atacccaaca
     4441 gcgtgttggt cggcacattt tttacgcttg ccaaaaccgc gcccgaaata taggcgaaca
     4501 gggcgaagaa gacaaaggcg cactgccaca taatcgccga ctggctgctg aggaaatacc
     4561 gcaacaggaa aatctctgcc gatttgatgt tgccgccata caaaccgacg gcggcatagg
     4621 caagcaatac gcttaaagga acaaaccagc gcatcggttt gaaaaaccaa cccaaaaaca
     4681 cggcaatacc ggcacttgcc cacaacatga ccgtttcgta aatgtccata tgcataccgg
     4741 aacgggtctg tacgaaaacc gtagccgcaa aaaccagcac ggcaaatacc caatcccaaa
     4801 gattcagatt gctgatcaaa gacttctgaa tcagcagctc gtgttccgga agggttttat
     4861 agtgttcagt catgattcaa gtccttgccg agccgttgca gactctcgac gtgttttgga
     4921 aattccttct gcaaatcccg ttcgctgcgg gccgaagaca tggcaaaacg gattttgccg
     4981 tctgaaaaca atacccacgc ccgtttttcg cgcacataaa acatcaatac cgtacccaat
     5041 accaacagca ccgagccgag atagaccaaa agcgcacccg gggaacgggt catctgcaaa
     5101 cccgacgaac gcacctcgga aaacccatca agttgcagca gcataggcgc gggatattcg
     5161 gtcaaacccg tgtacgcatc catactgtgc agcaggaaac ggttccgcgc ttcatcctgc
     5221 tgccattcgg gcaagccgta ccggcgtatg gtttcatcca aagcagcgtt catcacgccg
     5281 taaagcattt cgtagaaata accctgcatc ttatcctgct gctctttcgg gatattggac
     5341 gtaataaatt cgtccaatcc caaatagcct ttttgtgcaa agatgttcag cgtgttttcc
     5401 gcagccagca tgaattgttc gcggatttcg gcaggtgcgt ctttggttgc gtcggcaacc
     5461 agacgtttgc gcccttcccc atctttcaaa aactcacgca atgccataaa ggtgtccgct
     5521 ttcaactgct tgtccaaggg gatacgcagc cagcggtatt gctgctgcaa gccgctgcgc
     5581 gtgccggtaa tccaaaaata atcctgttcc tgcaaaaccg gcagcatata gtttttatat
     5641 tcgaccgcct gccctgccgc atcacggata cggtaaacaa tggaagggcc gatattggtg
     5701 tattttttac cttcctgagt aacggcgcgg acatcgttca gcgtggattt caggcttttt
     5761 tcccgttccg cgccctcgct catgtcctcc acattcatag aagtgaactg atcgaactca
     5821 agacgatatt tgtgtttgcc aatttccaac ggaaactggt gtatggatgt tgccttcaac
     5881 acgacaggct cgcgcgaagc atcacccaaa ttccacgcct tgaatgtcaa atccgaaccg
     5941 ccgtcggcaa aactcgcctg ataaatcgtg atgccgtgca aggtcaaagg atggttcacg
     6001 cggatggtgc gctcgagttt ctcaccggtt gccttgtccg tcacttcaat atcgctggcg
     6061 aaatcacgcg gcatacccgt attgtaaaaa tcgatatgga attttttcag tttgacttca
     6121 aaaggcaagt cctgaaccaa tatcccgttg tcggcattca ggaaaaccac atccgcactc
     6181 tgcccctcgg aaatattgac gttgccccta aatgagagat tggacgcact caaaatactt
     6241 tcgggcttga aatccttggc ataaaccgcc tgattgtccg gaacaatccg accggtcagc
     6301 atacccagtt tcaacagcag gttactgtct atcaacccgc ccaggcaaat gacaatcaaa
     6361 gcaacatggg caaagatata gccccatttg ttcatcgtgc cttttttggc ggcaatcaga
     6421 accgacccgc cctcacggct gacggttttt ccctgaaaac cctgcacctc cagataacgt
     6481 ttggcaactt cgggggcaat ttttacatcc aacagcgaag aatggcgcat cgccgccaga
     6541 gatttttctt taaccttttc ccgaaaagac ttcatttcgc gccagaacgg cggcacattg
     6601 cgaatcaggc acaaactggt agaaaccacc aaaaacatca tgataacgac aaaccatgcc
     6661 gaagcataga cgtcatacag tcccagaaaa ccaaaaatct gcgcccaaaa aggtccgaat
     6721 ttgaccaaat aatccgtctg cggctggttt tgctgcaaca ccgtaccgat aaccgatgca
     6781 atacccagca gactgagcaa agcgaccgca aagcgcatgg agctgaaaaa agcgaaccac
     6841 ggacgggaaa gaagtggggg agatctacgg gatttactca ttgtgtgttt attccgccat
     6901 caggaatatg ggaaagcaga attgggcaaa cagaaaacaa cgtcccgatt ctactgtctt
     6961 gatgcttttt atttcaagac aatgaagaca gcctgcatcg attccaacgg ttgcgattga
     7021 aaaaacttat cgcagaattg cctgaagccg tctgaaaact tttcagacgg cctctaaaac
     7081 agactattgc ggaattaacg caaaccttgg ataaagttgg cgaccgcttt caaatcttct
     7141 tcagacatac ggtttgcaat atcttccatg atggtatttt tacgctgacc ggacttgtag
     7201 gcattcatct gttcaacaat atatgcctga tgctgaccgc ccaaacgcgg ataagcctga
     7261 atttcgcttc cgcctcccgg catacccgca ccgctcggac cgtggcagga catacacgcc
     7321 ggcacttttt tatcgctcaa accgccgcga tagattttcg cacccaattc gggattttcc
     7381 ttaggattgg cttcaccgga tttgggctgc tgtttggcat agaatgcgga tacgttcaaa
     7441 atatcctgat cgctcaaatt cattaccacc ggtttcatca cagctgccga accgtgggtg
     7501 cgtttaccgt cgcggatgcc gatagtttga tgatagatgt aagcagtatg ctgtgccgcc
     7561 aaacgcggat acatcgcaat gccgctgtta ccgtctgctg catggcaagc cgcacaaacc
     7621 gttgcggcaa cctgtttgcc tttttccacg tctgctttgg gagaggcgga aaccgcaccg
     7681 gcagccaaaa caaaggccaa taaagtcaat cgtttcatgg agtgctcctg attacagcat
     7741 tggataacgc aacaatgctc tttttatatt caaatacggg atttttgacc cgattaaaac
     7801 cgatgattct gtaaacgtgt tattctatac taaatttaca ttaaattacc actgtgtttc
     7861 acataaaacc aaccgcatat ttttgctgtc ggacaaacgg cggcggaaaa caaggatatg
     7921 cccatgaacc tttttcaaaa cgccaaattc ttcacgacgg tcaaccacct taaagacctg
     7981 cccgacaccc ctctcgaaat tgcctttgtc ggcaggagca atgccggaaa atccagtgcc
     8041 atcaataccc tgaccaacca tgtccgtctt gcctacgttt caaaaacacc cggacggacg
     8101 cagcatatca acttcttcga gctgcagaac ggcaatttta tggtcgattt gcccggctac
     8161 ggttatgccc aagtccccga agcagtacgc gcacattggg tcaatctgct cggcgactat
     8221 ctgcaacagc gcaaacagct tatcgggctg gttttgatta tggatgcccg ccatccttta
     8281 aaagaactcg acatccgtat gctggacttt ttccacacga ccggcagacc ggttcacatc
     8341 ctgctgtcaa aagccgacaa attatccaaa aacgaacaga taaaaaccct gtcccaagtc
     8401 aaaaaactgc tcaaacctta ttccgacagg caaaacatca gcgtacagct gttttccagc
     8461 ctgaaaaaac aaggtattga cgaggccaac cgaactgtcg gaagctggtt tgacgcagca
     8521 gatgccgccg cttcctctcc aaaggaaaac tgaccccaat tatacggaaa ccgtatttcc
     8581 cccacttgac cgaccgcaaa catttaaaaa attgccactg ccaaatctaa aatgccgtct
     8641 gaaagacttt tcagacggca ttttgcggag tctttaaaac agagaatcca actgctgctg
     8701 tttggaacca gtattactcg gaagcaccgg cgtttcctgc atatcttggc ggacttcgtc
     8761 atccgccgcc tgccgtccgc cttctgccgc gcccccgtca tcttcttttg cccgtcggga
     8821 aggttgcggc gcaataccgc tgttgtccag cgtcaagccc ggatcggtta ccatacgttc
     8881 cttcatatag tattcgccat tgctgctgac cacaccttca ggcattttca tccccttgcc
     8941 ctgctttcct ttcaacgcaa aacgcatata gtccacccaa accggcaccg caatcgtacc
     9001 gccgtagccg acacgcccca tactcttagg tttgtcgaag ccgatatata cggcagtaac
     9061 cacatcaggg ttaaaaccga caaaccacgc atccttattg tcattggtcg tacccgtttt
     9121 accggcaata tccgttcttc ccaacgcagc tgcccccctt gccgtaccga cacggaccac
     9181 atcctgcata atcttataca taatataggc attgcgcgga tcgattgcct gaggcgcatt
     9241 ttgcccggcc tccaaaggtt gcatttgggc gcgcaacctg ccgtctctgt cataaatctt
     9301 atcgattacg tgcgaagaaa ccctatatcc gccgttcgca aatacgctat atgcctccgc
     9361 cactttcaac ggcgttgtct cgcccgtacc taaagccata gacaggcttg ccggcagctc
     9421 ggacgacctg aagccgaaac gccggatata ctgttgcgcg taaccgacac cgatagacat
     9481 caaaatacgg atggaaacca tattcttgga agccgtcaga gcctgtctca aagtaatgta
     9541 gccggaatat ctgccgtctg aatttttagg tgtccaaacc gaaccgttcg gccctttccc
     9601 cggcagggaa atcggcgcat cgttaaccac tgtggacgcg gtcatcccct tagataatgc
     9661 cgccgaatag acaaacggct taaaggtcga acccggctgc cgcattgcct gaacggcacg
     9721 attgaatgtt ttgctgtgaa aatcataacc gccgaccagc gcgcgcacag ctccggtttt
     9781 tgcatccagc gaaaccaaag ccccctgcag caacggctct tgaaccaccg cccaacgccc
     9841 gccgttgttt ttgacacgga tgaccgcgcc cctgcggata cggtcctccc ccattttttc
     9901 attattgacc gcgcgggccg caaaacccaa ggcgcgcctg tcaagcgtaa cccgcctgcc
     9961 gccgggcagc tgtatgacga catttttctt tttagtcaca tccaacacaa cggcgggaac
    10021 cattttatcg acggtataga gtcccgacag atactggctg acagtctcct cgacatcttc
    10081 actcttactc aaatcgatat agttttccgc accgcggtag ctgctgccgc gatcgaaatt
    10141 ccgtagagcc ttgcgcaatg cctcggttgc caccttctga tgatcagcgc ggaccgtggt
    10201 ataaacctta aaaccctgcg tataggcatc ttcaccgtat ttctcataca gttcctgacg
    10261 caccatttcc gccacatata aagcactctg atcgattttc tgaacaaacc gctcgtaatg
    10321 cagttcctca ttcaacgcct gatcgcgctg ttgcacggta atcatcttct cctcgagcat
    10381 attgttcaaa atatacttct ggcgcaactt ggcacgttcc ggattaacaa tcggattata
    10441 ggcagacgga gccttgggca gtcccgcaag catggcggct tccgccaaag tcaaatctcg
    10501 gacattctta ttgaaataga tttgcgcggc agatgcaaaa ccataggcgc gctgaccgag
    10561 gtaaatctga ttgaaataca actcgaggat tttgtctttg cttaaagact gctcgatttt
    10621 ataggcaagc aacacctcat tgaatttgcg tgtgaacgtt ttttcactgc tcaaataaaa
    10681 atttttcgcc acctgctgcg taatcgtact cgcacccgac tgcacgctgc cggacacgac
    10741 attgccgacg gcagcgcggg caacacccca aacatccacc ccccaatgcc ggtaaaagcg
    10801 tttatcctcg gcggcgataa ccgcattccg caacacctct gggaaatcgc cgatttttgt
    10861 aaattcgcgc cgctgctccc catacatacc gatgacttcc ccatccgccg aataaatagt
    10921 caacggcatt ttaggctggt aatgctgcaa agaatccaaa gacggcagtt tcggatacgt
    10981 taccaaaata gcaatggcaa ccaaacccac tccaaataca caaaacccaa aaaccaaacc
    11041 aaaacaagtc gttaaaatct ttttaatcat agctgaataa taatttacca ttattggtat
    11101 taaataaagt aaaatagcaa ccgatttcta caaagcacgg tttcaatgtg caaagaacaa
    11161 ggaatccatt acggataccg aaacggttac tcactgtaca aataaagcag gaactttcat
    11221 catgcgcttg tttaaaagct tgaaaaaccc taaaaaaaca gatgccaagc tccctaaaaa
    11281 atcttcggga ctcaataacc gcgcggcaat cggcatcgat atcgaccagc attccatcaa
    11341 aatggtccaa ttgtcaggac gtagtttaaa ccaaattcaa ttggaaaaat acgtcattgc
    11401 caaattacca aagaatatca ttcaaggcaa taaagtccaa aattacgatc aacttgttac
    11461 atatttgcaa caagcctatg ccaaactggg tacgtcgtgc aaaaacatca tcgcgtccgt
    11521 cccgcaaaat ctggcaacca tcgaacaatt gacctacaca gacaaagatg cagaattaga
    11581 cctgcagggg ttcgtggagt cctccatctc cgaagtcagc tcgatatcgc tcgaagaagc
    11641 caattacgac tatcaggtct tgtcccaatc ggccgccggc gaagctgtgt tggccgtcgc
    11701 atcgagaaag gatgaaatcg aacccctgat tgacgcattc aacgccgccg gtatgaaatt
    11761 atccgcgctt gatgtggaca ttttcggaca atacaacgcc tacgcgctat ggataaacca
    11821 tttcgccccc gagcttgcag ccgaaaaagt cgccattttc ggcgtatatg ccgcacagac
    11881 ctacgccttg gtcatccaag acggaaaaat cctatacaaa caggaaacct ccgtcagcga
    11941 agaacagctc aaccaactca tccagcgcac ctatcaggta acagaagaaa aagcggaaga
    12001 aatcatcaac tccccgcaaa aaccttccga ttaccaagaa agcgtggcaa actatttcaa
    12061 ccagcagatt acccaagaaa tacaaagggt cttgcagttt tattacacca cgcagaccgc
    12121 agacgatatg accgacatca agcatatcct gctgaccggg gaagcggcgc gccaggaagg
    12181 catcgcccaa accgtcgcct cacaaaccaa tgcagatgta caatgcgtcc atcccgcgcg
    12241 ttattttgcg gacaacctca aaacagacaa acaacaattc gaacttgatg cgccgacact
    12301 gaccagggcg ttcggtttgg cggtacgggg attataatta tgaacaattt aatcaaaatc
    12361 aacctcctcc cctacaggga agagatgaac aagcgcaaac agcagcagtt taaaacgctg
    12421 atgtacggtg ccgtgctgac gggcgttgcc gccgttgcgg caacctacct gtttatcgac
    12481 aatatgatca ataaccagtc ggaaagaaac acgctgctgg aaacctccat cgcacacttg
    12541 gataccgagc tgtcggaaat acaaaagctc aaacaggaaa aagatgcctt cctgattaag
    12601 aaaaacaaag tcgaggagct ccagctcaaa cgcctccaag ccgcaaaaat cctcgacagc
    12661 ctgaatgagg ccgtccccgg aagcacctac ctgacctcgc tggatgccgt taccgccgac
    12721 tcttatcggc tcagcggcag gacatccagc gacaaccgcg ttgccgccat gatgagggcg
    12781 atgcccaata ccggcatatt caagcaaccc gaattgttaa gcatcaagaa aaacaattcg
    12841 catcaagaat ttacccttca ggcaacatta caacccatcg taaaggcggc cgaatccaaa
    12901 gagaatccgg cttcgggaaa cgcacaggag gcaaactgaa tggcttctaa atcatctaaa
    12961 accaacttgg atctcaacaa ccttcacctg ctcaaccttc ctgccaggct ttttatcgcc
    13021 ctgctggccg ttgccgccgt gctggggctc ggttatgccg gattgttcaa aagccagatg
    13081 gaatcccttg aggaatacga agcaaaagaa accgaactga aaaacaccta caaacagaaa
    13141 agtatcgacg cggccagcct gaacaacctg agggacgaac ttgcctcaat ccgctctgcc
    13201 ttcgatatca tgttgaaaca gctgccgaca gatgcagaaa ttcccaatct ggttcaagag
    13261 cttcatcagg caggttcgag caacggcctg cgcttggaca gcgttatgcc ccaacctccc
    13321 gtagatgacg gccccatcaa aagattaccc tattccattt ccattaccgg aaattacgaa
    13381 cagatcagcc aatttacccg cgatgtcggc agcctctccc gaatcattac ccttgagtcg
    13441 ctgaaaatcg cccaatctcc ggaaaacggc ggcaatcctg acggcaagag cagcatcctg
    13501 aacctcagtg ccattgccac cacctaccaa gcaaaatccg tagaagagct tgccgcagaa
    13561 gcggcacaaa atgccgagca aaaataactt acgttaggga aaccatgaaa cactatgcct
    13621 tactcatcag ctttctggct ctctccgcgt gttcccaagg ttctgaggac ctaaacgaat
    13681 ggatggcaca aacgcgacgc gaagccaaag cagaaatcat acctttccaa gcacctaccc
    13741 tgccggttgc gccggtatac agcccgccgc agcttacagg gccgaacgca ttcgacttcc
    13801 gccgcatgga aaccgacaaa aaaggggaaa atgcccccga caccaagcgt attaaagaaa
    13861 cgctggaaaa attcagtttg gaaaatatgc gttatgtcgg cattttgaag tctggacaga
    13921 aagtctccgg cttcatcgag gctgaaggtt atgtctacac tgtcggtgtc ggcaactatt
    13981 tgggacaaaa ctacggtaga atcgaaagca ttaccgacga cagcatcgtc ctgaacgagc
    14041 tgatagaaga cagcacgggc aactgggttt cccgtaaagc agaactgctg ttgaattctt
    14101 ccgacaaaaa caccgaacaa gcggcagcac ctgccgcaga acaaaattaa gaagaggatt
    14161 actccattat gaataccaaa ctgacaaaaa tcatttccgg tctctttgtc gcaaccgccg
    14221 cctttcagac agcatcggca ggaaacatta cagacatcaa agtttcctcc ctgcccaaca
    14281 aacagaaaat cgtcaaagtc agctttgaca aagagattgt caacccgacc ggcttcgtaa
    14341 cctcctcacc ggcccgcatc gccttggact ttgaacaaac cggcatttcc atggatcaac
    14401 aggtactcga atatgccgat cccctgttga gcaaaatcag tgccgcacaa aacagcagcc
    14461 gtgcgcgtct ggttctgaat ctgaacaaac cgggccaata caataccgaa gtacgcggga
    14521 acaaagtttg gatattcatt aacgaatcgg acgataccgt gtccgccccc gcacgccccg
    14581 ccgtaaaagc cgcgcctgcc gcaccggcaa aacaacaggc taccgcaccg tctaccaagt
    14641 ccgcagtatc cgtatccaaa ccctttaccc cggcaaaaca acaggctgcc gcaccgttta
    14701 ccgagtccgt agtatccgta tccgcaccgt tcagcccggc aaaacaacag gcggcggcat
    14761 cagcaaaaca acagacggca gcaccagcaa aacaacaggc ggcagcacca gcaaaacaaa
    14821 ccaatatcga tttccgcaaa gacggcaaaa atgccggcat tatcgaattg gctgcattgg
    14881 gctttgccgg gcagcccgac atcagccaac agcacgacca catcatcgtt acgctgaaaa
    14941 accataccct gccgaccacg ctccaacgca gtttggatgt ggcagacttt aaaacaccgg
    15001 ttcaaaaggt tacgctgaaa cgcctcaata acgacaccca gctgattatc acaacagccg
    15061 gcaactggga actcgtcaac aaatccgccg cgcccggata ctttaccttc caagtcctgc
    15121 cgaaaaaaca aaacctcgag tcaggcggcg tgaacaatgc gcccaaaacc ttcacaggcc
    15181 ggaaaatctc ccttgacttc caagatgtcg aaatccgcac catcctgcag attttggcaa
    15241 aagaatccgg gatgaacatt gttgccagcg actccgtcaa cggcaaaatg accctctccc
    15301 tcaaagacgt accttgggat caggctttgg atttggttat gcaggcacgc aacctcgata
    15361 tgcgccagca agggaacatc gtcaacatcg cgccccgcga cgagctgctt gccaaagaca
    15421 aagccttctt acaggcggaa aaagacattg ccgatctggg cgcgctgtat tcacaaaact
    15481 tccaattgaa atacaaaaat gtggaagaat tccgcagcat cctgcgtttg gacaatgccg
    15541 acacgaccgg aaaccgcaat acgcttgtca gcggcagggg cagcgtgctg atcgatcccg
    15601 ccaccaatac cctgattgtt accgataccc gcagcgtcat cgaaaaattc cgcaaactga
    15661 ttgacgaatt ggacgtaccc gcgcaacaag tgatgattga ggcgcgtatc gtcgaagcgg
    15721 cagacggctt ctcgcgcgat ttgggcgtta aattcggcgc gacaggcaag aaaaagctga
    15781 aaaatgatac aagcgcattc ggctgggggg taaactccgg cttcggcggc gacgataaat
    15841 ggggggccga aaccaaaatc aacctgccga ttaccgctgc cgcaaacagc atttcgctgg
    15901 tgcgcgcgat ttcctccggt gccttgaatt tggaattgtc cgcatccgaa tcgctttcaa
    15961 aaaccaaaac gcttgccaat ccgcgcgtgc tgacccaaaa ccgcaaagag gccaaaatcg
    16021 aatctggtta cgaaattcct ttcaccgtaa cctcaatcgc gaacggcggc agcagcacga
    16081 acacggaact caaaaaagcc gtcttggggc tgaccgttac gccgaacatc acgcccgacg
    16141 gccaaatcat tatgaccgtc aaaatcaaca aggactcgcc tgcgcaatgt gcctccggta
    16201 atcagacgat tctgtgtatt tcgaccaaaa acctgaatac gcaggctatg gttgaaaacg
    16261 gcggcacatt gattgtcggc ggtatttatg aagaagacaa cggtaatacg ctgaccaaag
    16321 tccccctgtt gggcgacatc cccgttatcg gcaacctctt taaaacacgc gggaaaaaaa
    16381 ccgaccgccg cgaactgctg attttcatta ccccgaggat tatgggtacg gccggcaaca
    16441 gcctgcgcta ttgatgcgtc aaaataaggg catatgtttt acggcatatg ccctttcttt
    16501 atgctttttg ccgcgaccga aatgccgtca ttcccgcgca ggcgggaatc cagtccgttc
    16561 agtttcggtc atttctgata aattcctgtt gcttttcatt tctggattcc cacttttgtg
    16621 ggaatgacgg cggaaggggt aaatcctcgc aatccaaagc ctcgtcattt ccacaaaaaa
    16681 cagcaacccg gaacagcaac ttaaaacccc gtcattcccg cgcaggcagg aatccaactt
    16741 gtccggttcc ggttgttttt cgtctcgtaa cttttgagcc gtcattcccg cgcaggcggg
    16801 aatctaggtc tgtcggttca ggaacttatc ggataaaacg gtttctccaa ccctgcgttc
    16861 tagattccca ctttcgtggg aatgacggga tatgggtttc cgtgcggacg tgttcggatt
    16921 tccgcctgcg cgggaatgac ggcg
//
LOCUS       DAXHKG010000035        16599 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.035, whole genome shotgun sequence.
ACCESSION   DAXHKG010000035 DAXHKG010000000
VERSION     DAXHKG010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16599
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.035"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(145..567)
                     /locus_tag="ACFMWP_000871"
     CDS             complement(145..567)
                     /locus_tag="ACFMWP_000871"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HFC5891498.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            complement(578..1975)
                     /gene="atpD"
                     /locus_tag="ACFMWP_000872"
     CDS             complement(578..1975)
                     /gene="atpD"
                     /locus_tag="ACFMWP_000872"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HFC5891499.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            complement(2013..2888)
                     /gene="atpG"
                     /locus_tag="ACFMWP_000873"
     CDS             complement(2013..2888)
                     /gene="atpG"
                     /locus_tag="ACFMWP_000873"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HFC5891500.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            complement(2913..4460)
                     /gene="atpA"
                     /locus_tag="ACFMWP_000874"
     CDS             complement(2913..4460)
                     /gene="atpA"
                     /locus_tag="ACFMWP_000874"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HFC5891501.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            complement(4471..5004)
                     /locus_tag="ACFMWP_000875"
     CDS             complement(4471..5004)
                     /locus_tag="ACFMWP_000875"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HFC5891502.1"
                     /translation="MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            complement(5009..5479)
                     /locus_tag="ACFMWP_000876"
     CDS             complement(5009..5479)
                     /locus_tag="ACFMWP_000876"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HFC5891503.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            complement(5550..5786)
                     /gene="atpE"
                     /locus_tag="ACFMWP_000877"
     CDS             complement(5550..5786)
                     /gene="atpE"
                     /locus_tag="ACFMWP_000877"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HFC5891504.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            complement(5843..6709)
                     /gene="atpB"
                     /locus_tag="ACFMWP_000878"
     CDS             complement(5843..6709)
                     /gene="atpB"
                     /locus_tag="ACFMWP_000878"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HFC5891505.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            complement(6699..7052)
                     /locus_tag="ACFMWP_000879"
     CDS             complement(6699..7052)
                     /locus_tag="ACFMWP_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HFC5891506.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            complement(7420..7758)
                     /locus_tag="ACFMWP_000880"
     CDS             complement(7420..7758)
                     /locus_tag="ACFMWP_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891507.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRNNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            complement(7893..8753)
                     /locus_tag="ACFMWP_000881"
     CDS             complement(7893..8753)
                     /locus_tag="ACFMWP_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC5891508.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     VALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            8912..9481
                     /locus_tag="ACFMWP_000882"
     CDS             8912..9481
                     /locus_tag="ACFMWP_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HFC5891509.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            complement(9543..10406)
                     /locus_tag="ACFMWP_000883"
     CDS             complement(9543..10406)
                     /locus_tag="ACFMWP_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC5891510.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEQIQAELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(10565..11251)
                     /locus_tag="ACFMWP_000884"
     CDS             complement(10565..11251)
                     /locus_tag="ACFMWP_000884"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HFC5891511.1"
                     /translation="MADLTFQQAVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARTGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            complement(11253..11990)
                     /locus_tag="ACFMWP_000885"
     CDS             complement(11253..11990)
                     /locus_tag="ACFMWP_000885"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HFC5891512.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            12367..14214
                     /gene="ltgA"
                     /locus_tag="ACFMWP_000886"
     CDS             12367..14214
                     /gene="ltgA"
                     /locus_tag="ACFMWP_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HFC5891513.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPERKTLADYGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFRNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVMGAQSRVGAQGLMQVMPATAHEIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTPL
                     EGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGIVPAR"
     gene            14503..14715
                     /gene="rpsU"
                     /locus_tag="ACFMWP_000887"
     CDS             14503..14715
                     /gene="rpsU"
                     /locus_tag="ACFMWP_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HFC5891514.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            14847..15293
                     /locus_tag="ACFMWP_000888"
     CDS             14847..15293
                     /locus_tag="ACFMWP_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HFC5891515.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            15314..15463
                     /locus_tag="ACFMWP_000889"
     CDS             15314..15463
                     /locus_tag="ACFMWP_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891516.1"
                     /translation="MPSEARIAGSDSIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(15492..15884)
                     /locus_tag="ACFMWP_000890"
     CDS             complement(15492..15884)
                     /locus_tag="ACFMWP_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HFC5891517.1"
                     /translation="MPTSTKPYVLRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFSGQAHDIWIPVGHVLSLFARETSEGMGFELE
                     EYRPDTPPENTPAETAPRPAKKGLKLVK"
     gene            complement(15956..16561)
                     /locus_tag="ACFMWP_000891"
     CDS             complement(15956..16561)
                     /locus_tag="ACFMWP_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HFC5891518.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NYVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
BASE COUNT         3990 a         4389 c         4350 g         3870 t
ORIGIN      
        1 gtttcggtta ggcggcaggc tgccctattg aataccttaa agcaggctat gcctgccaac
       61 gccatatcca aacacagtct ttaatttaaa tccggaaaat aaaaagcacg accaaacggt
      121 cgtgcttttc caaaccaaac aagtttattt cttgtgcgaa cggatatagt ccaaagtttt
      181 gagctgtgca atcgcagcag ccaatgcttt atgtgcttcc gccaaagcct tatcgtcttt
      241 agcttgggaa atgcccgctt ctgcggcttt tttcgcctct tccgcacgtg cctgatccat
      301 ctccgcactg cggacggcaa catccgccaa gacagttact ttatcaggct gtacttccaa
      361 aacaccgccg gaaacagcaa ccaaaacctc tttatcctcg cccggaacgg tcaaacgcaa
      421 agcccccggc cgcaccaaac tcataatcgg ctcgtgtcgc gggtaaatac caagctcacc
      481 ttgaacggtc ggaaccacta caaagctggc ttcgcccgaa tagatgtttt gctcgctact
      541 gaccacctca acttgcatga tgctcatgcc gacctcctca gtttaaggtt ttcgctttct
      601 caaccgcttc ttcgatgctg ccgaccatgt agaatgcctg ttcgggcaga tggtcgtatt
      661 cgccgttcaa gatggctttg aagccggcaa tggtatcgcg cagggcgaca tatttgcccg
      721 gagaacctgt aaacacttcg gcaacgtgga acggttggga caggaagcgt tggattttac
      781 gcgcacgcat tacggtcagt ttgtcttcgt cagacaattc gtccataccc aagatggcga
      841 tgatgtcgcg caattctttg tatttctgca gggtggactg tacgccgcgc gccacgtcgt
      901 agtgctcttg acccaagacc atcggatcca gttggcgcga agtggaatca agcggatcga
      961 ctgccgggta aatacccaaa gaggcaatat cgcggctcaa tacgacggtt gcgtccaagt
     1021 gggcgaacgt tgttgccgga gacgggtcgg tcaagtcgtc cgcaggtaca tatacggctt
     1081 ggatagaagt aatagaaccg gtttgggtag aggtaatacg ctcctgcaaa cgacccattt
     1141 cttctgccaa tgtcggttgg tagcccactg cagacggcat acggcccaac aatgcggata
     1201 cttcggtacc ggccagagtg taacggtaga tgttgtccac gaagaacaat acgtcgcggc
     1261 ctttgccgtt ttcgtctttt tcgtcacgga agtattccgc catggtcaaa ccggtcaatg
     1321 cgacgcgcaa acggttgccc ggaggttcgt tcatctgacc gtaaaccatt gccactttat
     1381 ccaatacgtt ggaatctttc atctcgtggt agaagtcgtt accttcgcgg gtacgctcac
     1441 ccacgcctgc gaacacggac aagccgctgt gcgctttggc gatgttgttg atcaattcca
     1501 tcatgttcac ggttttaccc acaccggcac cgccgaacag acctacttta ccgcctttgg
     1561 caaacggaca cagcaagtca atcactttaa tgcccgtttc gagcaattcg gttgtggaag
     1621 acagttcgtc aaacttagga gcggcttggt ggatggcacg actcttgtcg gtatcgatcg
     1681 gacctgcctc gtcaacaggc gttcccaata catcgacaat gcgtcccaac gtacctttac
     1741 ctaccggcac agtaatgggc gcaccggtat tgctcacagt catgccgcgt ttcaaaccgt
     1801 ccgagctgcc catcgcaatg gtacggacta cgccgtcgcc caaaagctgt tggacttcca
     1861 aagtcagacc gttttcgtct aatttcaaag cgtcgtaaac gcgcggaatc atgtcgcgtg
     1921 gaaattccac gtcaacaacc gcaccgataa tttgtacgat tttgccttgg ctcattatcg
     1981 tatcctaatt tccgtacagg attcagacgg catcagacag ccgccgcacc tgctacaatt
     2041 tctgacaatt ccgtggtaat cgcagcttga cgcgatttgt tatataccaa acgcaactct
     2101 ttgatggcat tgcctgcatt gtctgttgca gctttcatgg caaccatgcg ggctgcctgt
     2161 tcggatgcca tattgtcgct caacgcctga taaaccacag actctaaata gcggcgaacc
     2221 agatattcca acactgcaag tgcagtcggt tcgtagcggt attcccagct gaacggtgat
     2281 ttgggagctg aatcgccaat cacgttctca ccgataggca gcaatacttc cattctcggt
     2341 tcctgacgca tggtattgac aaaacccgaa tacaccagat ggattctgtc aatttcatgt
     2401 ttctcatacc gttggaagag ttctgtcaaa ggtccgagca gcatttccat ttttggggta
     2461 tcgcccaaat ttacggcact ggcaaccaca ttcagaccaa tgctctgaca cgccatcaga
     2521 cctttactgc caaggcatac gatttcctct tcaatacctt gattccgata ctcttgaact
     2581 tgtgccaaaa actttttcag cacgttggcg ttcaaaccgc cacacaaacc cttatcagac
     2641 gtaatcaaaa taaaaccgac acgtctgatt tcccgatgag attccagcaa cggaatacca
     2701 tgatcggtat tggtttgcgc aagatggctc atcaccatac gcactttttc ggcatacgga
     2761 cgcgccaaac gcatccgttc ctgagtcttc cgcattttag aggttgacac catctgcatc
     2821 gctttagtga tcttttgggt attctgaaca ctgcggattt tggtgagaat ctcttttcct
     2881 actgccattt cagactcctt tcacttcaag ccttatgcct gataggcgta agaagatttg
     2941 aaggatttca tggctgcttc aagcgttttc tcgctctcgt cggacattgc acctgaagca
     3001 ttgacggctt ccaaaacttc cggatgttgg gtacggacaa agctcaaaaa ttcagattca
     3061 aaagccagag ctttggcaac cggaacatca gaatacgaac cgttgttgat tgcccaaagg
     3121 gtcaaagcca tttcagccgt attcaacgta ctgaactgtt tctgtttcat cagttcggtt
     3181 acgacttcgc catgctccaa ttgtttgcgc gtagcttcat ccaaatcgga tgcaaattgc
     3241 gagaacgccg ccaattcacg atattgcgcc aacgccaaac ggataccgcc acccagcttt
     3301 ttaatcactt tggtttgtgc agcaccgcct acgcgggata cggaaatacc ggcattgatt
     3361 gcaggacgga taccggcgtt gaagaggtcg gtttccaaga aaatctgacc gtcggtaatc
     3421 gaaatgacgt tagtcggaac gaaagcagat acgtcgcccg cttgggtttc gataatcggc
     3481 aaagcagtca gagaaccggt tttgcctttt acttcgccgt tggtcaattt ctccacttcg
     3541 tgttcattga cacgtgctgc acgttccaac agacgggagt gcaggtagaa cacatcgccg
     3601 ggataggctt cgcggccggg cggacggcgc aaaagcaggg aaatttgacg gtaagccaca
     3661 gcctgtttgg acaaatcgtc ataaacaatc aaggcatctt cgccgcggtc gcggaagaat
     3721 tcacccatcg tacaaccgga gtaaggtgcg atatattgca atgccgccgc ttcagatgca
     3781 gttgcagcaa ccacaatcgt gtgttccatc gcgccatgct cttccaattt gcggaccacg
     3841 ttggcaatag aagatgcttt ttgaccgata gcgacataaa tacagataac gcccgtacct
     3901 ttttggttga cgatggcatc caatgctacg gccgttttac cggtttgacg gtcgccaata
     3961 atcaactcac gctgaccgcg accgacagga accatagagt caatcgcctt cagaccggtt
     4021 tgcatcggct ggtcaaccga tttgcgcgca atcacgcccg gtgcgatttt ttcgataggg
     4081 gcggtcaaag ttgtattaat cgggcctttg ccgtcaatcg gacgacccaa tgcatcaacg
     4141 acgcgtccga ccagttcgcg tccgaccggc acttccaaga tacgaccggt acaagtaacc
     4201 gtgtcgcctt ctttaatatg ttcgtactcg cccaacacta cggcgccgac ggagtcgcgc
     4261 tccaggttca tcgccaagcc gaaagtgtta cccgggaatt cgagcatctc accttgcatt
     4321 gcatctgaca aaccatggat gcgaacgata ccgtcagtta ccgaaatcac cgtaccacgg
     4381 gtacgcactt cggcatttac agacagattt tcgatcttgg ctttaatcaa atcgctaatt
     4441 tcagcaggat taagctgcat gaaaactctc ctaattcgtc atagtcgtgt acaaggcact
     4501 caatttgcct tgtacagaca aatccaaaac ctgatcaccc acttcaactt ttatgccgcc
     4561 aatcagctcc ggttcgattt cgacagagat tttcagctcg ctgtcgaaac gcttattcag
     4621 catttgcgcc aactcgccga cctgtttgtc ggtcaacgga taggcactgt aaatgacggc
     4681 agatttgata tggttgaatg ataaggtcaa gtcttgatat tgagcatata cttccggcaa
     4741 tatcgacaaa cgtttctgcc cggccaagac gataacaaag tttttcaact ccttgtcttt
     4801 caaaccgacc aaatcgatga ggatatctgc tttttctgaa gcattcgttt caggacggtc
     4861 aatcaatgaa gccaccttcc cttcctgaac aaccgccgca agtttttcca gtccgcccaa
     4921 ccaagactca atttggcttt tttcctgagc cagaccgaac aatgcctttg cataaggtct
     4981 ggcaatcgtt gcgaactctg ccataagatt acagctcctg tttcagggta tcgagcagtt
     5041 ttgcgtgttt ggaagcatcg acttcgctgc gcaaaataga ttcggcacct ttgacagcca
     5101 acacggcaac ctgctcgcgc agggattcgc gtgcgcggaa caattcctgc tccacatcgg
     5161 cctttgcctg agctgcaatg cgcgccgcct cggaagaagc ctgttctttg gcttcttcga
     5221 caattttggc ggcacgtttt tcggcgttgg caaccatttc ggaaacctga ttacgccctt
     5281 ctgccaagag ttctgcaacc tttttttcag cctgctcgaa atcgctttta ccacgctcgg
     5341 cggcagccaa gccttcggcg acttttgcgg cacgctcatc caaagctttt gcaatcggcg
     5401 gccacacgaa tttcatggta aaccatacca aaccgaaaaa gacgatgatt tgagcgaata
     5461 atgttgcatt gatattcacg ttacttaacc ttcgtactgg ggttaatcaa acaggctgcg
     5521 cctgtacgga acggacgaat ccgtcctgat tatgcacctg caaacgggtt aacgaaggcg
     5581 aacagcagtg caatggcgac accaatcaag aatgcggcat caatcaaacc ggcaatcagg
     5641 aacagtttgg tttgcagcgg accgatcagt tcgggctgac gggcagaaga ctccaaatat
     5701 ttagaaccga ccattgcgat accgatagag gcacccaatg cacccaatgc aacgatcaaa
     5761 ccacatgcga tagcaatcaa acccatttta aactccttaa agaaacaaag gttaaactac
     5821 aaaaacaaac tacttaggaa aatcagtgcg catcatgtgc ctgtccgata tagacgaacg
     5881 ccaacgccat gaaaataaac gcctgcaggg taatcaccaa aatatggaaa atcgcccatg
     5941 ccaaaccggc aataatgtgg aatacaaaca gaatcggatc catgacttcg acgctgccgg
     6001 aagccgccca agcaccgcca agcaaggcta tcaacaagaa taccaattcg cccgcataca
     6061 tattgccgaa caaccgcata ccgtgggata cggttttaga aagaaactcg accaaattca
     6121 acagaaagtt cgcaggtgcg agttttgcac cgaacggcgc gctgaacaac tcgtgaaacc
     6181 agccacccaa tcctttgatt ttgatgttgt aatagataca aatcagcaac acgccgacag
     6241 cgagtgccaa agtggtgttc aaatcggcag tcggtacgac acgcagcagg gcgtgatggt
     6301 tgccggtaat gccctgccat accatcggca gcaaatcgac cggcagcata tccatcgcgt
     6361 tcatcagaaa aatccagaca aacagcgtca gacccaacgg cgcgacggct tttctagact
     6421 tttcgttgtg aatgatgctc ttacacatat cgtccacaaa ctcaaacaag atttccactg
     6481 cggcctggaa acgtccggga acgcctgccg tcgctttttt tgcaccgcgc cacaacagaa
     6541 agctgccgat tacgcccaac aggacggcaa aaaagacggc atcaaggtta ataaacgaaa
     6601 aatcagcaat gtttttcagt ccctgaccct gagtaacatc cgacaaactg gtcaagctct
     6661 gcaagtggtg cttgatgtag tcggcagcgg taatggtttc acctgccata atctttcact
     6721 ctcaacaata ctaaaaaaac caaatggctg acaccgagca gccccatcag aaacggggcg
     6781 aacaccagcg attgatgcca tattgcaaat acggcaagca tggacaacag cgacagcact
     6841 acttttaaaa tctctccgaa gacgaacatc ctgctttgca ggaaggggtt tcccctgaaa
     6901 agttttaaaa gtaaaactgc aacaaacgtg ggaagcaggt aggacaaacc gccaccgacc
     6961 gccgaaagga atccggcaaa accccataca gcaaaggcaa ctgcggcgca tatggacaat
     7021 acggcggatt gtaggatgat aatctgcttc ataaagggaa tgtttccgcc tcggatttgg
     7081 ggcgcggcta atataattta gaagccttat tacgtcaagc gacagttaat ctttgtgaaa
     7141 caacgtatcc caatccgccg cgctcgccgc ctgaataacg gcgacaggtg tcattctaac
     7201 acacattaca tataattaca ggatattaag gagtttgtcc gcaatttctt tacattttta
     7261 atgttcttac gtgatttgtt tgctttacgt ggaaataata aaaaatcaac gcgaaattgt
     7321 agcagtttat cggtcggatt gtcggcagtt tggggaattt gctcaataaa taaaaggtcg
     7381 tctgaaaata ttttcagacg accttttccg aataaaggat tagcaacggc ctgccgcttt
     7441 aagcaaagca ttgcattgac ttttgccttt gtgcgttccg cctcccaaac aaattgcatc
     7501 ggaagtggta acgccgattg tgctgattac actggtaaca tagcattggc tcacgcgctt
     7561 acccacagtt gcggtaaagt tgatgcgtat gccttcattg ttgcggttgc tgatttttac
     7621 ggcatttggg ctgacgccca aggcaaacgc ggcacgttcc tgaagtttct ggtcggaaac
     7681 ggttacatta ttgattgagc cgcaacctgc taatgccaac gcaacgaacg cagccgaaac
     7741 gatgatgcgt gtgttcataa tttcctcgaa aattaaaaat gaaaacagga aaacgattct
     7801 tacgtgaagc agaaaaatgt caatagaatt atatttccca cttaaaatct ggaaagctgt
     7861 tctctatatt tcagacggta tatcccgcaa aattaaggtc ggtaatctat gcccaactgc
     7921 ttcaagatat ggtcgaaggt ttcgggcgtg tcgaaatgca ggatgattct gcctttttta
     7981 tgattggcgg ttttgatttc ggcgttgaca cccagttttt cagtcagcaa atcattcagg
     8041 cggccgatgt cggcggcggc agtctttttg ggctcgggac gtttgttttg aagggcgacc
     8101 tggctgcggc gttcgacttc gcgcaccgac cagccgtttt tgacggcctt ttgcgccaat
     8161 tcgagctgtt cgacgacggg cagggtcagc aatgcgcggg cgtgccccat ttcgaggcgg
     8221 cgttggtaaa gcatttcctg cacgggttcg ggcaggctta aaaggcgcag gctgttggaa
     8281 atcgcgcttc ggcttttacc gacggcttgg gcgatggttt cgtgggtcag cccgaactcg
     8341 tcggcaaggc gtttcaagcc ttgtgcttct tcgatggggt tgaggttttc gcgctggagg
     8401 ttttcgatca aacccattgc caacgcggtt tcgtcgctga tggttttgat aacggcgggg
     8461 atttcggtca ggccggcaat ctgtgcggca cgccaacgcc gctcccccgc aatcagttcg
     8521 tatcgggaca gtccgtgttc gcgcacgatg acgggctgta tcacgccttg cgccttaatc
     8581 gaatccgcca gctcctgcaa ggcttcgtca tcgatttgaa cacgcgcctg atagcggccg
     8641 ggccggatat ctttaaccgc aaccgtggtc aatcggtcgc cgctgctgtt gtctgcgccg
     8701 ttggcgagca gcgaatccaa accgcgcccc aatccgcctt ttacttttgc cataccgccc
     8761 tcccgtgcct atttcagata ggatgttaaa tcggatattt tatcggatat tgggtgttgc
     8821 cgacaatttg tatccgtgtt tatcggattt ctgttttttc actataatag ccgatttgcc
     8881 gttgcaggcg gttttatggg aaaggcggat gatggtacgg cgtttgataa tcggcatcag
     8941 tggggcgagc ggtttccaat acggcgtgaa ggctttggaa cttttacgcg cgcaagatat
     9001 cgaaacgcac cttgtggtat cgaaaggtgc ggagatggcg cgcgcttcgg aaacggctta
     9061 tgcgagagat gaggtatatg ccttggcgga cttcgtgcat ccgatcggca atatcggggc
     9121 gtgcattgcc agcggtacgt ttaaaacgga cgggatgctg gtcgccccct gttcgatgcg
     9181 gacgcttgcc tcggtcgcgc acggcttcgg cgacaacctc ttgacgcgtg cggcggatgt
     9241 ggttttgaag gaaaggcggc ggctggtgct gatggtgcgc gaaacgccgc tgaaccttgc
     9301 ccatttggac aatatgaagc gggtaacgga aatgggcggc gtggtgtttc cccctgttcc
     9361 tgcgatgtac cgcaaaccgc agacggcgga cgacatagtg gcgcacagtg ttgcacacgc
     9421 tttgtcgctg ttcggaatcg atacgccgga ttcggcggaa tggcagggaa tggcggatta
     9481 aaggacaaaa atgccgtctg aacacggata cggttcagac ggcatcattt tatacgactg
     9541 ccttatttgg ctgcgccttc attccatgcg gcaggggatt tgtagccctc gaagcgtttg
     9601 tgcgcgtagg ctttgaacgc gtcggagtta taggcctcgg ttacgtcttt aagccattgg
     9661 ctgtctttgt cggcggtttt gacggcagac cagttgacat aggcaaagct cggttcttgg
     9721 aacagggctt cggtcagctt catgccgctg cttatggcgt agttgccgtt gacgacggca
     9781 aaatccacgt cggcgcggct acgcggcagt tgcgcggctt caagctcgac gattttgatg
     9841 tttttcaggt tctcggcgat gtccgctttg gatgcggtca gcggattgat gccgtctttg
     9901 agtttgatcc aacccagttc gtcgagcatc accaagacgc gggcgaagtt ggacgggtcg
     9961 ttgggcgcgg atacggtgct gccgtctttg acttcttcca gcgatttcag cttgcccggg
    10021 tacagtccca aaggcgcggt cggcacttgg aagacttcgg tgatgtccag attgtgttct
    10081 tttttgaagt cgtcaagata gggtttgtgt tggaagacgt tgatgtccaa ctcgccctca
    10141 gccaatgcca gattcgggcg tacatagtcg gtaaactcga ccagtttgac ggtgtagcct
    10201 tttttctcca gctcggcttg gatttgttct ttgaccatat cgccgaagtc gccgacggtc
    10261 gtgccgaaga cgatttcttt tttctccgcg ccgttgtcgg cggcggcaga agcggatgcg
    10321 gcgggcgcgc tgtctttttg accgccgcag gcggcgagga tgagcgcgag tgcggcggcg
    10381 gaaagggttt tgaagaaggt tttcatattt tctcctgatg ttgtggcagt ttcaaacaaa
    10441 aatgacgggc agggagtcct gccgtccgga ttcggcgttc agacggcatt tgccgcgaac
    10501 agggggattt tatagcattt ttcggatagc ggtgggggtt ttggcgttca gacggcattc
    10561 gggtttaacg tttgtcgagt ttccgcgcca acgcgttgcc ggtgctttga atcaggatga
    10621 ccagcagcac gaggagggcg acgatgaaga cgatgacttc ggtttggtag cggtagtagc
    10681 cgtagcggat ggcgaggtcg cccaagccgc cgccgcctat catccctgcc gccgcgctgt
    10741 atgacaaaag cccgatggca agcacggtaa tgctggaaac catgcccgtg cgcgcttcgt
    10801 ttaagaggac tttgcggacg atggcaaccg gcggcgcacc catcgcggcg gcggcttcaa
    10861 tcacgccttt ggggacttcg cgcaggtttt gttccaccag tcgggcgaag taaaacagac
    10921 cggacacgct caataccagc gaggcggcaa ctggaccgat ggtgctgccg acaatggcgc
    10981 gtgtggcggg tatcatcgca atcatcaaaa tgacgaaggg gaaggcgcgc atgaggttga
    11041 cgaggttgtc gagcaggaaa tttaccggct tgttgtaatg cagttggcgg ctggaggtta
    11101 cgaagagcaa cacgcccagc aacgtgccga aaacgacggc gaatgtggtg gacaaaccga
    11161 ccattacgaa ggtttcgccc aatgcgcgga cgatttcgcc tttcataccg atgatgttgg
    11221 aaacggcttg ttggaaggtc aggtctgcca tttcagtcct ctctgatgag ttcgcgcccg
    11281 atgtcggatc gggcgtggat ttggttgccg cgtacttcga cgatttcgac gactttgcct
    11341 ttatccaaca gggcggcgcg gtcgcacagt cgtctgataa cgctcatttc gtgggttacg
    11401 atgacgatgg ttacgttgaa tcgtttgttg atgtcttcca aacattccaa gacgctgcgc
    11461 gtggtggcgg ggtcgagggc ggaagtgggt tcgtcggcga ggatgacttg gggtttgggc
    11521 gcgagtgcgc gggcgatgcc gacacgctgt ttctgcccgc ctgaaagctg ggcgggatag
    11581 tggccggcgc gttcggtcag tccgacgatt tcgagacatt cggcaacgcg cgctttgatt
    11641 ttttcagacg gccatccggc gatttccaat gggaaggcga cgttgccggc gacggtgcgg
    11701 ttgttcaaca ggttgaactg ctgaaacacc atgccgatat tctgccgagc ctgacgcaat
    11761 gcggcggcat cgagcgcggt cagctcttgt ccgcagacgt tgaccttgcc gctgtcggga
    11821 cgttccaaca ggttaatcag gcgcaacagg gtggatttgc ctgcacccga ataacccatc
    11881 agcccgaaga tttcaccgtc gcggatttcg aggctggtcg gctcgacggc ggcaaaacgg
    11941 gtcttgtcgc gcgtttggta atgcttggaa accttgtcca aaataatcat tgtctttccc
    12001 atacaacaaa gcccgatgtc ggacacaacg ggcgcggaag ataaagctga aattgtcgga
    12061 acgctttagc tgttatgccc gcaagctgtg tcaaatcggc aggttaattt tcgtaggata
    12121 ttatcgggaa agcgtttttt tgtcaataag gcaggaagcg ggcaaccatt tcggacaatg
    12181 ccgtctgaaa caggcaaagg cagcagttcg caccaaaacg gcaaatgatt gaaaaatata
    12241 aattatgtca gaaacattcc aaagccggtg cagtttcggc atataattca tgcaaacgcc
    12301 tgttcagacg gcattttgtc ttttccaacc ctgaccgttc agggttccga ttcttaagga
    12361 aatccgatgt acctaccctc tatgaagcat tccctgccgc tgctggcggc cctggtgctt
    12421 gccgcgtgtt cttcgacaca cgcgcccagc agcaagaccc tggcagacaa tatagaaact
    12481 gccggtcttt cggcaagcgt tcccacccgc cctgccgaac ccgaaagaaa aacgctggca
    12541 gattacggcg gctacccgtc cgcactggat gcagtgaaac agaaaaacga tgccgccgtc
    12601 gccgcctatt tggaaaacgc cggcgacagt gcgatggcgg aaaatgtccg caacgagtgg
    12661 ctgaagtctt tgggcgcacg cagacagtgg acgctgtttg cacaggaata cgccaaactc
    12721 gaaccggcag ggcgcgccca agaagtcgaa tgctacgccg attcgagccg caacgactat
    12781 acgcgtgccg ctgaactggt taaaaatacg ggcaaactgc cttcgggctg caccaaactg
    12841 ttggaacagg cagccgcatc cggcttgttg gacggcaacg acgcctggag gcgcgtgcgc
    12901 ggactgctgg ccggccgcca aaccacagac gcacgcaacc ttgccgccgc attgggcagc
    12961 ccgtttgacg gcggtacaca aggttcgcgc gaatatgccc tgttgaacgt catcggcaaa
    13021 gaggcgcgta aatcgccgaa tgccgccgcc ctgctgtccg aaatggaaag cggtttaagc
    13081 ctcgaacaac gcagtttcgc gtggggcgta ttggggcatt atcagtcgca aagcctcaat
    13141 gtgcctgccg ccttggacta ttacggcaag gttgccgacc gccgccaact gaccgacgac
    13201 caaatcgagt ggtacgcccg cgccgccttg cgcgcccgac gttgggacga gctggcctcc
    13261 gttatctcgc atatgcccga aaaactgcaa aaaagcccga cctggctcta ctggctggca
    13321 cgcagtcgcg ccgcaacggg caacacgcaa gaggcggaaa aactttacaa acaggcagca
    13381 gcgacgggca ggaattttta tgcggtgctg gcgggggaag agttggggcg caaaatcgat
    13441 acgcgcaaca atgtgcccga tgccggcaaa aacagcgtcc tccgtatggc ggaagacggc
    13501 gcgattaagc gcgcgctggt gctgttccga aacagccgaa ccgccggcga tgcgaaaatg
    13561 cgccgtcagg ctcaggcgga atggcgtttt gccacacgcg gctttgacga agacaagctg
    13621 ctgaccgccg cgcaaaccgc gttcgaccac ggtttttacg atatggcggt caacagcgcg
    13681 gaacgtaccg accgcaaact caactacaca ttgcgctata tttcgccgtt taaagacacg
    13741 gtaatccgcc acgcgcaaaa tgttaatgtc gatccggcgt gggtttacgg gctgattcgt
    13801 caggaaagcc gcttcgttat gggcgcgcaa tcccgcgtag gcgcgcaggg gctgatgcag
    13861 gttatgcctg ccaccgcgca cgaaatcgcc ggcaaaatcg gtatggatgc cgcacaactt
    13921 tacaccgccg acggcaatat ccgtatgggg acgtggtata tggcggacac caaacgccgc
    13981 ctgcaaaaca acgaagtcct cgccaccgca ggctataacg ccggtcccgg cagggcgcgc
    14041 cgatggcagg cggacacgcc cctcgaaggc gcggtatatg ccgaaaccat cccgttttcc
    14101 gaaacgcgcg actatgtcaa aaaagtgatg accaacgccg cctactacgc cgccctcttc
    14161 ggcgcgccgc acatcccgct caaacagcgt atgggcattg ttcctgcacg ctgacgtacc
    14221 gatgccgtct gaaacccgcc cggtctttca gacggcattt ttatcccgaa cggcattgac
    14281 ggcgaaccat aaatataaga caatccgaaa attgtttttc ctgctttttc aagcagcttg
    14341 acacggcaca agccgacccg ttaggaggtg atgtttccgt cacggcgcgt atcccgccgc
    14401 cgcaaggcac agcgatacgg taaaccttca acaccgtctg ccctaccctt tccaccgata
    14461 tgatgggcag atgaaacaac cgaatttatt aaaggaaata aaatgcctgc aatccgcgta
    14521 aaagagaatg aaccctttga agtcgctatg cgccgtttca aacgcgccgt agaaaaaacc
    14581 ggcctgctga ccgagctgcg cgcccgcgaa gcctacgaaa aaccgactac cgaacgcaaa
    14641 cgcaaaaaag cggcagccgt aaaacgcctg caaaaacgcc tgcgcagcca acaactgccg
    14701 cccaaaatgt actaaacgtt caagtacaga ttacaggtca gccctgtgat atgaggacac
    14761 accgcaagac ctgctctgcg gtgtgttttg cttttcagac ggcatcgaaa cccgccgttt
    14821 ccatccgaca tcccagcgag gacattatga gcctgaaaat ccgccttacc gaagacatga
    14881 aaaccgcgat gcgcgccaaa gaccaagttt ccctcggcac catccgcctc atcaacgccg
    14941 ccgtcaaaca gtttgaagtg gacgaacgca ccgaagccga cgatgccaaa atcaccgcca
    15001 tcctgaccaa aatggtcaaa cagcgaaaag acagcgcgaa aatctacact gaagccggcc
    15061 gtcaggattt ggcagacaaa gaaaacgccg aaatcgaggt actgcaccgc taccttcccc
    15121 aaatgctctc cgccggggaa atccgtactg cggtcgatgc cgccgttgcc gaaaccggcg
    15181 cggcaggtat ggcggatatg ggcaaagtga tgggcgtatt gaaaacccga cttgccggca
    15241 aagccgatat gggcgaagtc aacaaaatcc tgaaagccgt gctgaccgcc tgattgcccg
    15301 aatatcggac aaaatgccgt ctgaagcccg tatcgcaggt tcagacagca ttttcaatgt
    15361 cccaatatcg aatcggcagg ggcaacacgg tttcgataca ccgaaacggg ttttgccgat
    15421 aaacggattc cgtttgcgcc ccatcggaca aaatgccgtc tgaaacacga ttccgttcag
    15481 acggcataga tttatttgac caatttcaag ccttttttgg cgggtcgggg cgcggtttcg
    15541 gcaggggtgt tttcaggcgg cgtatcgggg cggtactcct ccaattcaaa ccccatacct
    15601 tcgctggtct cccgtgcgaa aaggctgagg acgtgtccga caggtatcca tatatcgtgc
    15661 gcctgtccgc tgaaacgggc ggaaaagctg atccaatcgt tgtcgatttg aaggttttgc
    15721 gtggcggttg cgccgatatt gagcataatt tcgttgtcgc ggacgtactg catggggacg
    15781 cgcgtgtgtt cgttgaccca aacaaggatg tgcggtgtga ggctgttgtc gctgcaccat
    15841 tcgcagagag cgcggaggac gtagggtttg gtggaagtgg gcataatggg ttccgtgttg
    15901 tacgccaaaa taggaaaatg cctgcaaaac ggtgggtttt gcaagcattt cggacttatt
    15961 tgcgcatggc tttttcggcg ggtgtcagtg cttcgataaa ggcttcgcgc tggaagatgc
    16021 gctcggcgta tttgagcagc ggcgcggcac ttttgcccag tttgacatcg tagtggtcga
    16081 gccgccacag cagcggagca agggcgacat caatcataga aaaatcttcg ccgaggatgt
    16141 atttgctttt gctgaacgaa ggggcgagca tcgtcaggcc gttgccgatg gcttcgcgcg
    16201 cttttgcctg ttccttgttg gtggcggcgg ggttttccaa aacttggacg tagttgaaca
    16261 attctttttc catacggtac agcaccagcc ggcccctgcc gcgcataacg ggatcaccgg
    16321 gcataagctg cggatggggg aagcgttcgt cgatgtattc gttgatgatg ttggactcgt
    16381 gcagcaccaa atcgcgctcg accagtacgg ggacctggtt gtacgggttc atgacggcga
    16441 ggtcttcggg tttgttgtaa atatcgacgt ctttgatttc aaaatccata cctttttcgt
    16501 acaaaacgaa gcggcagcgg tggctgaagg ggcaggtaat gccggaatag agggtcatca
    16561 taataattgt cgctcctgtg tgatgcctac aaaacggct
//
LOCUS       DAXHKG010000036        16473 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.036, whole genome shotgun sequence.
ACCESSION   DAXHKG010000036 DAXHKG010000000
VERSION     DAXHKG010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.036"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            241..1305
                     /locus_tag="ACFMWP_000892"
     CDS             241..1305
                     /locus_tag="ACFMWP_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HFC5891519.1"
                     /translation="MKAARFYDKGDIRIKDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIVHD
                     DVPTGSGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKEGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVNPNL"
     gene            1446..1769
                     /locus_tag="ACFMWP_000893"
     CDS             1446..1769
                     /locus_tag="ACFMWP_000893"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HFC5891520.1"
                     /translation="MGDSVLSTIQQTIDRRKSADPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMSSKDKDPSHLVYEVADLWFHTMILLAHHNLKAEDVLDELARRQGLSGLVEKA
                     ARTES"
     gene            1842..2165
                     /locus_tag="ACFMWP_000894"
     CDS             1842..2165
                     /locus_tag="ACFMWP_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HFC5891521.1"
                     /translation="MDNCIFCKIAAKDILAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2212..2415
                     /gene="tatA"
                     /locus_tag="ACFMWP_000895"
     CDS             2212..2415
                     /gene="tatA"
                     /locus_tag="ACFMWP_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HFC5891522.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2419..3105
                     /gene="tatB"
                     /locus_tag="ACFMWP_000896"
     CDS             2419..3105
                     /gene="tatB"
                     /locus_tag="ACFMWP_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HFC5891523.1"
                     /translation="MFDFGLGELVFIGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMEGNLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPFPDAANTLSDGISDVMPSERSDTSAETLGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRGLRPKHR
                     AKPKLRVRKS"
     gene            3119..3889
                     /gene="tatC"
                     /locus_tag="ACFMWP_000897"
     CDS             3119..3889
                     /gene="tatC"
                     /locus_tag="ACFMWP_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HFC5891524.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLASVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTEQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3942..4550
                     /locus_tag="ACFMWP_000898"
     CDS             3942..4550
                     /locus_tag="ACFMWP_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HFC5891525.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPANIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRSPLSALKP"
     gene            4559..4912
                     /locus_tag="ACFMWP_000899"
     CDS             4559..4912
                     /locus_tag="ACFMWP_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HFC5891526.1"
                     /translation="MNRQTAYFLASFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4902..6716
                     /locus_tag="ACFMWP_000900"
     CDS             4902..6716
                     /locus_tag="ACFMWP_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HFC5891527.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALRLQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACKSLVAHYGQERIVTLLAWSLLIGSLLQSCIVVIQFAGWEDTPM
                     LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMIGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIHDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6906..7583
                     /gene="misR"
                     /locus_tag="ACFMWP_000901"
     CDS             6906..7583
                     /gene="misR"
                     /locus_tag="ACFMWP_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HFC5891528.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7596..9002
                     /gene="misS"
                     /locus_tag="ACFMWP_000902"
     CDS             7596..9002
                     /gene="misS"
                     /locus_tag="ACFMWP_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HFC5891529.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9120..11546
                     /locus_tag="ACFMWP_000903"
     CDS             9120..11546
                     /locus_tag="ACFMWP_000903"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC5891530.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EENQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQSAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALEAADPALIAEAL
                     HLPPYRHTTHNAVQFQFGSHSLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTIIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     YPKTLSLRNNTTVTITPILPEDAEAKQQFVRSLGPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTAKDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLRTDHKIT"
     gene            11591..11836
                     /gene="rpsP"
                     /locus_tag="ACFMWP_000904"
     CDS             11591..11836
                     /gene="rpsP"
                     /locus_tag="ACFMWP_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HFC5891531.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11852..12361
                     /gene="rimM"
                     /locus_tag="ACFMWP_000905"
     CDS             11852..12361
                     /gene="rimM"
                     /locus_tag="ACFMWP_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HFC5891532.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTVSVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12361..13110
                     /gene="trmD"
                     /locus_tag="ACFMWP_000906"
     CDS             12361..13110
                     /gene="trmD"
                     /locus_tag="ACFMWP_000906"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HFC5891533.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRSLIPKESRILNKILQEQREIQS"
     gene            13126..13491
                     /gene="rplS"
                     /locus_tag="ACFMWP_000907"
     CDS             13126..13491
                     /gene="rplS"
                     /locus_tag="ACFMWP_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HFC5891534.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13813..14538
                     /locus_tag="ACFMWP_000908"
     CDS             13813..14538
                     /locus_tag="ACFMWP_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HFC5891535.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14562..15437
                     /locus_tag="ACFMWP_000909"
     CDS             14562..15437
                     /locus_tag="ACFMWP_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HFC5891536.1"
                     /translation="MNLYDLLLAPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSSLTLITLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15514..16428
                     /locus_tag="ACFMWP_000910"
     CDS             15514..16428
                     /locus_tag="ACFMWP_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HFC5891537.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLILLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4282 a         5280 c         3627 g         3284 t
ORIGIN      
        1 ccgtactggt ttttgttaat ccaccataaa tgccatctga agccgattcg gttttcagac
       61 ggcatcatta tttgacctga cgcaaacaga aagccttccg cgtgcttaaa cacatctctt
      121 gtagtaaaat atctaaacag attcaactgg aaacggtcag gcttcttcac gccattccca
      181 tttcaaccgc cgcctgccag attcagacgg tattcctact tgaaaacaag gagcgttaca
      241 atgaaagcag cacgttttta cgacaaaggc gacatccgca tcaaagacat ccccgaaccg
      301 accgtcgccc ccggcaccgt cggcatcaat gttgcctggt gcggcatctg cggtaccgac
      361 ctgcacgaat tcatggaagg cccgattttc attccgcctt gcggtcatcc gcacccgatt
      421 tccggcgagt ccgcacccgt cacgatggga cacgagttct ccggcgtggt ctatgccgtc
      481 ggcgaaggcg tggacgacat caaagtcggt caacacgtcg tggtcgagcc ttacatcgta
      541 cacgacgacg taccgaccgg ctcgggcagc aactaccacc tctccaaaga catgaacttt
      601 atcggcttgg gcggctgcgg cggcggcctg tccgaaaaaa tcgccgtcaa acgccgttgg
      661 gtgcatccga tttccgacaa aatcccgttg gatcaagccg ctttgatcga accgctgtct
      721 gtcggacacc acgcctatgt acgcagcggc gcgaaagaag gcgacgtcgc attggtcggc
      781 ggtgcaggtc cgatcggttt gctgttggct gccgtgttga aagccaaagg catcaaagtc
      841 atcatcaccg agttgagcaa agcacgcaaa gacaaagcgc gcgaatccgg cgttgccgac
      901 tacatcctcg acccgtccga agtcgatgtt gtcgaagagg tgaaaaaact gaccaacggc
      961 gaaggcgtgg acgtggcatt cgaatgtacc agcgtgaaca aagtgttgga tactttggtc
     1021 gaagcctgca aacctgccgc caatttggtt atcgtatcca tctggagcca ccctgcaacc
     1081 gtcaacgtcc acagcgtcgt gatgaaagag ctggatgtgc gcggcacgat tgcctactgt
     1141 aacgaccacg ccgaaaccat caaactggtc gaagaaggca aaatcaacct cgaacccttc
     1201 atcacccagc gcatcaagct ggacgaactg gtttccgaag gcttcgagcg tctgatccac
     1261 aacaacgaat ccgccgttaa aattattgtg aatccaaacc tataagcaaa ttacatttgc
     1321 aacagcacaa atgccgtctg aaacgctcag acggcatttt ccaacgaaac gcaacaggcg
     1381 tattgcccga gagcagccgt ttaacctatc attccgaaca aacagaaaca aacagaagga
     1441 aaatcatggg agattccgta ctatccacca tccaacaaac catcgaccgg cgcaaatccg
     1501 ccgatccgtc cgaatcctac gtcgcacaac tcctgcacaa gggcgaggac aaaatcctaa
     1561 aaaaagtgat tgaagaggcg ggcgaagtat taatgtcatc caaagacaaa gacccgtccc
     1621 acctggttta cgaagtcgcc gacctttggt ttcacacgat gatcctgctg gcgcaccaca
     1681 acctgaaggc ggaagacgta ttggacgaac ttgcacgccg tcaggggctg tcggggctgg
     1741 tcgaaaaagc cgcccgcaca gaatcttaaa tttatattac aatctcatcc tttccacgtt
     1801 taatccgtct gggtgcttct tcagacggca acggagccgt tatggacaac tgtattttct
     1861 gcaaaatcgc cgccaaagac attctggcgc aaaccgtcta tgaagacggc gaaatggttt
     1921 gtttcaaaga catcaacccc gctgctccgg ttcatctgct gctgattccc aaagtccatt
     1981 tcgattcgtt ggcacacgcc gcgcccgaac atcagcccct tttgggaaaa atgatgctga
     2041 aagttcccga aatcgccaaa gcggcaggac tggcagacgg cttcaaaacc ctgatcaaca
     2101 ccggaaaagg cggcggacaa gaggtcttcc acctgcatat acacatcatg ggcacacccg
     2161 tataaaccgt tatttcacaa tcaaccccta atacttactt aaggatacat catgggcagt
     2221 ttttctctga cgcactggat tatcgtactg attatcgtcg ttttgatatt cggcaccaaa
     2281 aaactgcgca acgtcggcaa agacctcggc ggtgcggttc atgacttcaa acaggggctg
     2341 aacgaaggta cagacggcaa agaagcccaa aaagacgatg taatcgaaca caaaaaagac
     2401 gaagacaaag cgtaatttat gtttgatttc ggtttgggcg agctggtttt tatcggcatt
     2461 atcgccctga ttgtcctcgg ccccgaacgc ctgcccgagg ccgcccgcac cgccggacgg
     2521 ctcatcggca ggctgcaacg ctttgtcggc agcgtcaaac aggaatttga cacgcaaatc
     2581 gaactggaag aactaaggaa ggcaaagcag gaatttgaag ctgccgctgc tcaggttcga
     2641 gacagcctca aagaaaccgg tacggatatg gagggtaatc tgcacgacat ttccgacggt
     2701 ctgaagcctt gggaaaaact gcccgaacag cgcacgcctg ctgatttcgg tgtcgatgaa
     2761 aacggcaatc cctttcccga tgcggcaaac accctatcag acggcatttc cgacgttatg
     2821 ccgtccgaac gttccgatac ttccgccgaa acccttgggg acagcgggca aaccggcagt
     2881 acagccgaac ccgcggaaac cgaccaagac cgcgcatggc gggaatacct gactgcttct
     2941 gccgccgcac ccgtcgtaca gaccgtcgaa gtcagctata tcgatactgc tgttgaaacg
     3001 cctgttccgc acaccacttc cctgcgcaaa caggcaataa gccgcaaacg cggtttgcgt
     3061 ccgaaacacc gcgccaaacc taaattgcgc gtccgtaaat cataaagaga gcaatccggt
     3121 gtccgaaaca caaaacgaac aacccgtcca accgcttgtc gagcatctca tcgagctgcg
     3181 ccgccgcctg atgtggacgg ttgtcggcat cttagtctgc tttttcggcc taatgccgtt
     3241 tgcccaacaa ctctatactt ttatcgccga cccgctgatg gcaaacctgc ccaaagacac
     3301 cagcatgatt gccaccgatg tcatcgcacc gtttttcgtg ccggtcaaag ttaccctgat
     3361 ggcggcattt ttaatttcgc tgccgcatac gctctaccaa atctgggcat ttgtcgcgcc
     3421 cgcactctac caaaacgaaa aacgcctgat tacgccgctc gtcctctcca gcgtcagcct
     3481 gtttttcatc ggcatggcat ttgcctactt tttggttttc cccgtcattt tcaaattcct
     3541 tgccagcgtt acccctgtcg gtgtcaatat ggcgacagac atcgacaaat acctctcctt
     3601 catcttgggg atgtttgtcg cattcggtac aacgtttgaa gtccccattg tcgttatcct
     3661 gttaaccaaa attggtgtgg taacaaccga acagctcaaa cgcgcccgcc cctatgtgat
     3721 tgtcggcgcg tttgtcattg ccgccatcat cacgccgccc gatgtgattt cacaaaccct
     3781 gcttgccatt ccgctgattc tcttatacga agcaggtatt tggttcggac gctttttcac
     3841 gccacgttca gaacaggatg gcgacataca gccgcctgca acaacctgac actatgccgt
     3901 ccgaacctcc gcctcatacc gcaacagatt aaggaatacc tttgaatacc ctctatttag
     3961 gttcaaacag cccgcgccga atggaaatcc tgacacagtt gggctatcag gtcgtcaagc
     4021 tgcctgccaa catcgacgaa acggtcagac agaacgaaga ccctgcccgt tacgttcaaa
     4081 ggatggcaga agaaaaaaac cgaaccgccc tgaccctctt ttgcgaaacc aacggcacaa
     4141 tgcccgattt ccccctgatt accgccgaca cctgcgtcgt ttcagacggc attatattag
     4201 gcaaaccccg ctcccaagcc gaagcaatcg aatttttaaa ccgattgtcc ggcaaacaac
     4261 ataccgtcct gactgctgtc tgcattcatt atcgcggcaa aacgtcaagc cgcgtccaaa
     4321 ccaaccgcgt tgttttcaag cccctgagtt cggaagaaat ttccgcctat gtgcaaagcg
     4381 gcgaaccgat ggacaaagcc ggcgcctacg ccgtacaagg cataggcggc atctttatcc
     4441 aatctatcga aggcagcttc agcggcatta tgggactgcc cgtttatgaa accgtttcga
     4501 tgttgcagga tttgggatac cgctccccct tgtccgccct taaaccgtaa agaccgccgt
     4561 gaacagacaa accgcttact tccttgcctc cttcagcctg atcgcactga taatcctgtc
     4621 cctttcttgg gaactgtgga ttgcaccgtt acgcccgggc ggctcgtggc tcgcgctcaa
     4681 agccctcccc ctctgtctgc cgctttcagg catcttgaaa aagaaaatct atacctacca
     4741 atacagctcc atgctggttc tgatttattt tgccgaagcc gtcatgcgcc tgttcgacgc
     4801 ctatccggca gaacaaattt gcgccgcgct ttccgcagta ttcagcatca tcttcttcat
     4861 atcctgcctg tcgttcgtca aacaatacaa ggaaacaaac aatgcccgct gaaacgaccg
     4921 tatccggcgc gcaccccgcc gccaaactgc cgatttacat cctgccctgc ttcctttgga
     4981 taggcatcgt cccctttacc tttgcgctca ggctgcaacc gtcgcccgac ttttaccacg
     5041 atgccgccgc cgcagccggc ctgattgtcc tgttgttcct cacggcagga aaaaagctgt
     5101 ttgatgtcaa aatcccacct atcagcttcc ttctgtttgc aatggcggcg ttttggtatc
     5161 ttcaggcacg cctgatgaac ctgatttacc ccggtatgaa cgacatcgtc tcttggattt
     5221 tcatcttgct cgccgtcagc gcgtgggcct gcaagagttt ggtcgcacac tacggacaag
     5281 aacgcatcgt taccctgctt gcctggtcgc tgcttatcgg ctccctgctt caatcctgca
     5341 tcgtcgtcat ccagtttgcc ggctgggaag acacccccat gcttcaaaac attattgttt
     5401 acagcgggca aggcgtaatc ggacacatcg gacagcgcaa caacctcgga cactacctga
     5461 tgtggggcat actcgccgcc gcctacctca acggacaacg aaaaatcccg cccgccctcg
     5521 gcgcaatctg cctgattatg cagaccgccg ttttaggttt ggtcaattcg cgcaccatct
     5581 tgacctacat agccgccatc gccctcatcc ttcccttctg gtatttccgt tcggacaaat
     5641 ccaacaggcg gacgatgatc ggcatagccg cagccgtatt ccttaccgcg ctgttccaat
     5701 tttccatgaa caccattctg gaaaccttta ccggcatccg ctacgaaact gccgtcgaac
     5761 gcgttgccaa cggcggtttc acagacttgc cgcgccaaat cgaatggaat aaagcccttg
     5821 ccgccttcca gtccgccccg atattcgggc acggctggaa cagttttgcc caacaaacct
     5881 tcctcatcaa tgccgaacag cacaacatac acgacaacct cctcagcaac ttgttcaccc
     5941 attcccacaa catcgtcctc caactccttg cagagatggg aatcagcggc acgcttctgg
     6001 ttgccgcaac cctgctgacg ggcattgccg ggctgcttaa acgccccctg acccccgcat
     6061 cgcttttcct gatctgcacg cttgccgtca gtatgtgcca cagtatgctc gaatatcctt
     6121 tgtggtatgt ctatttcctc atccctttcg gactgatgct cttcctgtcc cccgcagagg
     6181 cttcagacgg catcgccttc aaaaaagccg ccaatctcgg catactgacc gcctccgccg
     6241 ccatattcgc aggattgctg cacttggact ggacatacac ccggctggtt aacgcctttt
     6301 cccccgccac tgacgacagt gccaaaaccc tcaaccggaa aatcaacgag ttgcgctata
     6361 tttccgcaaa cagtccgatg ctgtcctttt atgccgactt ctccctcgta aacttcgccc
     6421 tgccggaata ccccgaaacc cagacttggg cggaagaagc aaccctcaaa tcactaaaat
     6481 accgccccca ctccgccacc taccgcatcg ccctctacct gatgcggcaa ggcaaagttg
     6541 cagaagcaaa acaatggatg cgggcgacac agtcctatta cccctacctg atgccccgat
     6601 acgccgacga aatccgcaaa ctgcccgtat gggcgccgct gctacccgaa ctgctcaaag
     6661 actgcaaagc cttcgccgcc gcgcccggtc atccggaagc aaaaccctgc aaatgacccg
     6721 cgccggcgga tgcggatacc gcccgaaatg taaagctcca tgcaagacat tgcaaaaaac
     6781 agcaaaccgg tagggaaata cgctatcaaa aaacattgca gccgtgttaa gataaaccgt
     6841 caaacaatct tttcacgccc cgcccgaaac agggtcgggg cataccctta cgaaaaggaa
     6901 acaccatgag ccgcgtatta ctcgtagatg acgatgccct gctaaccgaa ctgctgaccg
     6961 aatacctgag cgccgaaggt ctgaacgtcc gcagcgttcc cgacggggaa gcaggcgtac
     7021 aggaaatcct gagcgggcag tacgatgtag tcgtattgga ttccatgatg cccaaaatga
     7081 acggcttgga tgtcttgaaa aacgtacgcg cccgaagcac cgtccccatc atcatgctga
     7141 ccgccaaagg cgacgacatc gaccgaatca tcggcttgga aatgggggcg gacgactatg
     7201 tccccaaacc ctgcacacca cgcgaactct tggcacgcat caatgctatc ctgcgccgcg
     7261 cacaacacag cggcgaacag aacaacgcac ccaacagcat ctccgtcagc gatgtcgtcc
     7321 tgtaccccgc caaacgccag gcatccgtca aagacatgcc gctcgaactg accagcaccg
     7381 aattcaacct gctcgaagtc ctgatgcgcc atgccggaca ggtagtcagc aaagaaaccc
     7441 tgtccgtcga agcactcgac cgcaagctgg caaaattcga ccgcagtatc gacgtacaca
     7501 tctccagcat ccgccacaag ttgggcgatg cctctctgat tcaaaccgta cgcggcttgg
     7561 gctacctgtt tgtcaaaaac tgaagcaacg ggcaaatgaa actgttccaa cgcattttcg
     7621 ccacattttg cgcagttatc gtctgtgcaa tctttgtggc gagtttttct ttttggctgg
     7681 tgcagaacac ccttgccgaa aaccagttca accaacgccg caccatcgaa accactttga
     7741 tgggcagcat catttccgca ttccgggcac gcggggacgc gggcgcgcgc gaaatcctga
     7801 cggaatggaa agacagcccc gtctcatcgg gcgtgtacgt tatacagggc gacgagaaaa
     7861 aagatatcct gaaccggtat atcgacagct acaccatcga acgcgcccgg cttttcgccg
     7921 ccggacaccc gcattccaac ctcgtccata tcgaatacga ccgcttcggc gaagaatacc
     7981 tgttcttcac caaagactgg gacaaactcc aagcccgccg cctgcccagc cccctgttga
     8041 tccccggtct gccgctcgcc ccgatttggc acgaactcat catattgtcc ttcatcatcg
     8101 tcgtcggact gctgatggcg tacatcctcg ccggcaatat cgccaaaccc atcagaatct
     8161 taggcaacgg catggacagg gtggcaaacg gagaacttga aacccgtatc tcccaacagg
     8221 tcgacgaccg cgacgacgaa ttgtcccatc ttgccatcca attcgacaaa atggtggaaa
     8281 aactcgaaaa actcgttgcc aaagaacgcc acctgctcca tcacgtctcc catgaaatgc
     8341 gttctcccct tgcgcgtatg caggcaattg tcggactgat tcaggcgcag ccccaaaaac
     8401 aggagcaata tctcaaacgg ctggaaggcg aactgacccg catggatacg ctggccgggg
     8461 aactgttaac cctgtcccgt ctcgaaactt ccaatatggc tttggaaaaa gaaagcctga
     8521 aactcctgcc cttcctgggc aacctggtag aagacaatca aagcattgcc cagaaaaacg
     8581 gacaaacggt taccctgtct gccgacggaa aaatccccga aaacacaacc atccttgcca
     8641 acgaaagcta cctgtaccgc gccttcgaca acgtcatccg caacgccgtc aactacagtc
     8701 ccgaaggcag caccatcctg atcaacatcg gacaagacca caaacactgg ataatcgacg
     8761 ttaccgacaa cggccccggc gtggacgaaa tgcagctccc gcacatcttc accgctttct
     8821 accgtgcaga ctccagtgcg aacaaacccg gaacaggact ggggcttgca ttgacccaac
     8881 atattattga acagcactgc ggcaaaatca tcgccgaaaa catcaaaccg aacgggctgc
     8941 ggatgcgctt catcctaccc aagaaaaaaa ccggttccaa aacagaaaaa agtgcgaact
     9001 gaccataatg ccgtctgaac cggcttcaga cggcattgca caaacagtta ccccaaaaca
     9061 aacacacagc gggtgcatct ccaaaaatca cgcacatacc gtccgcaaag gaatatatca
     9121 tgtcggcaca aaccgatccc ggctacttct tcatgcccaa ccacattatc ctgataggcg
     9181 cgagcgaacg tccgtacagc ctgggcgaac gcgtactcag caacctgctg agtacgccct
     9241 ttcaaggaaa aatcaccccc gtaaacccgc gccaccacac catagccggg cttcccgcct
     9301 acaccagcct caacaaaatc cccggcaatg cagacctgat tattgccgtt accctacccg
     9361 acagttacga caccctcttc aaaacctgcc gcaaaaagca gctccgacac atcatcctca
     9421 tacaggactg ggacagcctg tctgccgcag aactgcacac cgccgaaact gccatccgca
     9481 aacaccacgg caacggactc aacatcaccg cctgcaccac cgcaggcatc caactgccct
     9541 cactcggact taacatcagt acccaagacg gatacgccgc aggccatacc gccatactga
     9601 ccggcaatgc cgccgtcagc cgccaaatcg acaacatcct gaacaaactc cgtcaaggca
     9661 catcccgcca catcagcctg catcccggca tcagccccat cacatccgcc gattggctca
     9721 accgcttcgg acacagcctg cacaccaaaa ccgccgtcct acaccacaac cctgaagaga
     9781 atcagcgcaa actgttcagc gcaatccgcc aatttacccg ccatacgccg ctgattctcc
     9841 acatcacctg ccgcacgaca gaaaccgacc gtgccgtact gcactgcctc gcccgacact
     9901 gcaacttcct catcagtttc aacgccgacg acctcgaagc cgcactgcgc gcccaactgt
     9961 ccgaccttcc acccctgtcc cgactcgaca tcctgtccga cacgcctgcc gaatggctga
    10021 acgcgcacgc gccaaaaacc ctcgccctcc actttcccaa ccttccccac cacatccgca
    10081 acggacacct gaccggcaca cccacaccct caatctgcca cgacatcgcc tcacgtcagc
    10141 ttgcccgccc cgacacccaa gccgtcctga ccatcctcag cccctccgga cacgaggatt
    10201 acaaaaaaac agcacgcgcc cttatccgcc tgtccgaaca gagcgccaaa cccctgctcg
    10261 tcagcagccc cttttcagac ggcataacac atttcgacac ccccactcag gcaatccgca
    10321 ccctttccta ccgcaacacc gccgccgccc tgaaacaggc acagctcgac attgcaccgc
    10381 cgcagccatg ccgtctgaaa acaccgcaac cccaaaacat caaaaaagcc ctcgaagccg
    10441 ccgaccccgc cctaatcgcc gaagccctgc acctcccccc ctaccggcac accacccata
    10501 acgccgtcca attccaattc ggcagccact ccctctatgg cgacatcctg accgcacgtt
    10561 gcaacggaca aaccactgcc gtactcccgc cgtttaccac gctcgacagc cgccaccttg
    10621 cccgctttgc cgaactcgac ggcacacaaa ccctcgacca gttcctgcac acactgacca
    10681 tcattcccga ataccgccaa cacattctcg gcatcaccct caacctaaac ggcggacaat
    10741 acagcagcga tttcatctta aagacacccg aaacacacga cacgcccaaa cgcaagaaca
    10801 caggcaaagc cgcccaaacc ctcgaacatg ccgccgcaaa aatgcagagt gccgccgcat
    10861 acctgaaaca caaaaacccg acagccgccg aatttctccg ccacacaagc gaagccgccg
    10921 cagaactgct cggcagcaaa accgaaaccg gagcagccgt acccaacgta cttgccccct
    10981 atcccgcagc ataccccaaa acactgtccc taagaaacaa cacgaccgtt accattaccc
    11041 ccattttgcc cgaagacgca gaagccaaac agcagttcgt ccgcagcctc ggtcccgaag
    11101 cacggtacac acgcttcatg acccacacca acgaactgcc cgcagccacg ttggcacgcc
    11161 tgtgcaaccc cgattaccac tgtgaagccg catggacggc aaaggatgcc gacagcaaca
    11221 tcgtcgccgt cgtccgccac agccgcctga accgcaacga atgcgaattc ggcatcacac
    11281 tggcggaaca tatgcgcggc agcggactgg cacagaaaat gatggaactc atcatccaaa
    11341 ccgccgcaca gcaaggctac cggactatga gtgccgacat tctcaaaacc aataccccca
    11401 tgatcaaact tgctgaaaaa tcaggattta ccctcaagga atcggacacc gaaaaaaacc
    11461 tgtaccgcgc atatctgaac cttgcggcag acaaaacaac agaaaaaaca aataaaaact
    11521 tgcgcaccga ccacaaaata acctaaaatc ggcagtttcc atatatccga ttttctcaaa
    11581 aggactcaaa atggtagtta tccgtttggc acgcggcggc tcgaaacacc gccccttcta
    11641 caacgtcatc gttactgact cacgcagccg ccgcgacggc cgcttcatcg aacgcgtagg
    11701 cttctacaac cccgtagcca acgaaaaaca agagcgcgtc cgcctcaatg cagaccgcct
    11761 gaaccactgg attgcacaag gcgcgcaagt cagcgactcc gttgcaaaac tgattaaaga
    11821 acaaaaagcc gcctaattca catttgccgc catgacagac actcaaaacc gggtagccat
    11881 gggctacatc aaaggcgtat tcggcataaa aggctggttg aaaattgccg ccaacaccga
    11941 atattccgac agccttttgg actaccccga gtggcatttg gtcaaggacg gcaaaaccgt
    12001 cagcgttacc cttgaagccg gaaaagtcgt caacagcgaa ctccaagtca aattcgaagg
    12061 cataaacgac cgcgacttgg cattctcatt gcgcggttac accatcgaaa taccccgtga
    12121 agcattcgcc ccgacagaag aagacgaata ctactggaca gacttggtcg gcatgaccgt
    12181 cgtcaacaaa gaccataccg ttttaggcaa ggtaagcaac ctgatggaaa ccggcgcaaa
    12241 cgacgtattg atgattgacg gagaacacgg gcagattctg attccgttcg tttcccaata
    12301 tatcgaaacc gtcgataccg gcagcaagat tattactgcc gactggggtt tggactactg
    12361 atgcttatcc aggcagttac cattttcccc gaaatgttcg acagcattac ccgctacggc
    12421 gtaacgggac gcgcgaacag acagggaatc tggcagtttg aagcagtcaa tccccgaaag
    12481 tttgccgaca acagattggg ctacatcgac gaccgcccgt tcggcggcgg cccgggaatg
    12541 attatgatgg ctccgccgct tcatgcagca atagaacacg ccaaagcaca atcctcccaa
    12601 gctgcaaaag tcatctacct cagcccccaa gggaaaccgc tgacacacca aaaagcggta
    12661 gaactggcag aacttccgca tctgattctg ctgtgcggac ggtatgaggg catagacgaa
    12721 aggcttctgc aaagcagcgt cgatgaagaa atcagcatcg gagacttcgt tgtttccggc
    12781 ggagagcttc ccgccatgat gctgatggat gcggtattga ggctcgtacc cggcgtattg
    12841 ggcgatatgc agtctgccga acaagattcg ttctcaagcg gcattttgga ctgcccccac
    12901 tacaccaaac ccttagaatt tcaaggcatg gctgttccgg aagtattacg ttccggcaat
    12961 catggcttga tagcggaatg gcggttggaa caatcgctgc gccgcacctt ggagcgcaga
    13021 cccgatcttt tggaaaagcg cagtttaatc ccaaaggaat cccgcatctt gaataaaatc
    13081 ctacaagagc aacgggaaat ccaatcataa tttaggaaaa aaacaatgaa cctgattcaa
    13141 cagctcgagc aagaagaaat tgcccgcctg aacaaagaaa tccccgaatt cgcaccgggc
    13201 gacaccgtag tcgtatccgt acgcgtcgtg gaaggtaccc gcagccgtct gcaagcctac
    13261 gaaggcgttg tcattgcacg ccgcaaccgt ggtctgaaca gcaacttcat cgtccgtaaa
    13321 atttccagcg gcgaaggtgt tgaacgtact ttccaactgt actctccgac cgtcgaaaaa
    13381 atcgaagtca aacgccgtgg cgacgtacgc cgtgccaaac tgtactacct gcgcggtctg
    13441 accggcaaag ctgcacgcat caaagaaaaa ctgcctgcac gcaaaggttg attcaaaccc
    13501 gttttcccca atgccgtctg aaccttctga cggcatttct tattgccgca acatccgcaa
    13561 cggaacagca ccaagaagca caccccttcc ggcacatccc gaatccccgt ccgaaccgaa
    13621 caaaatttac agaccaaacg ttatacagta tcatatcagc catataataa taaccgcttt
    13681 accgccttcc ctttcaaaac cgcaaatcat catgacacct tcccttttac tatcaggatt
    13741 gaccttccgc ctcgtccttg ccctgattgc cgtatccctt ttatggggcg tttacttttg
    13801 ggcagtatcc gcatgagcat cattgtcgaa aacctgaccg tcagctaccg ccgccgacct
    13861 gccgtgcacc atgtggacat tacttttgaa gaacatagta tgtgggcggt tttcggtccc
    13921 aacggcgcag ggaaatccac ctttctcaaa tccttaatgg gattgcagcc tatcgatacg
    13981 ggcagcatcc ggctggacgg attgacccgt cagaacattg cctaccttcc ccagcagtcc
    14041 gacatcgacc gctcgcagcc catgaccgtt ttcgacttgg cggcaatggg gctatggtat
    14101 gaaatcggtt ttttcagagg aataaatgcc gttcaaaaac aacgcgttca cgaatctttg
    14161 gaacgcgtcg ggatgcggca gtttgccggc cgccaaatcg cccacctctc aaacggacaa
    14221 ttccagcgtg tcctttttgc ccgaatgctg gttcaaaacg ccaaattcct acttctagac
    14281 gaacctttca acgctgttga tgcacggacg acctacgaac ttctcgacgt attgcagaaa
    14341 tgccattgcg gcggacacgc catcatcgcc gtactgcacg attacgaaca agtccgtgcc
    14401 tactttccca ataccctgct gctcgcccgc gaaaaaattg cggcaggcgc aaccgagacc
    14461 attctgacag aaccctacct cgcccaagcc aacgccaaaa tgcagcaaca ggaaagcccc
    14521 gagtggtgcg cgtcataaat gccgtctgaa accgaaaaac catgaacctc tacgacctgc
    14581 tccttgcccc ctttgcagaa tttgacttta tgcgctacgc cctcgtatcc gtcttctgcc
    14641 tgtccctcag tgccgcaccc gtcggcgtat tcctcgtcat gcgccgtatg agcctgatag
    14701 gcgacgcatt gagccacgcc gtcctgcccg gtgccgccgt cggctacatg tttgccggct
    14761 taagcctgcc cgccatgggt ttgggcggcg tagccgcagg tatgctgatg gcactgcttg
    14821 ccggactcgt cagccgcttc accaccctga aagaagatgc caactttgcc gccttttatc
    14881 tcagcagcct cgccatcggt gtagtcctcg tcagcaaaaa cggcagcagc gtcgatctgc
    14941 tgcatctgct tttcggctct gtacttgccg tcgatattcc tgccctgcag ctcatcgccg
    15001 ccgtatccag cctcacgctc attacccttg ccgtcatcta ccgcccgctc gtactcgaaa
    15061 gcatcgaccc cctgtttctc aaatctgtcg gcggcaaagg cgggctttgg cacgtcctct
    15121 ttctcgtcct ggtcgtcatg aacctcgtat ccggctttca agccctcggc acactcatgt
    15181 ccgtcggact catgatgctg ccagccatta ccgcccgcct gtgggcgaag cacatgggcg
    15241 cactcatcct cctatccgtt ctgacagccc tgctgtgcgg cttgagcggg ctgctcattt
    15301 cctaccacat cgaaatccct tccggccccg ccatcatcct ctgttgcagc gtcctttatc
    15361 tcttttccgt catactcggc aaagaaggcg gcattctgac caaatggctc aaaaaccacc
    15421 gccaccacac cacctgaccc cgcaagccgc ttgaacaaac aggcggcttg ttttaccata
    15481 acagatgtta cgttatatca caggagaaca gttatgaaac acctcaaact cacccttatt
    15541 gccgcattgc tgaccactgc cgcaactgcc gccccccttc cggttgtaac cagtttcagc
    15601 attttaggcg acgttgccaa acaaatcggc ggagagcgcg tatccataca aagtttggtc
    15661 ggagccaacc aagatactca tgcctatcac atgaccagtg gcgacattaa aaaaatccgc
    15721 agtgcaaaac tcatcctgct caacggctta ggacttgaag ccgccgacat ccaacgtgcc
    15781 gtcaaacaga gcaaagtatc ctatgccgaa gcgaccaaag gcatccaacc cctcaaagcc
    15841 gaagaagaag gcggacacca tcatgaccac gaccatgacc acgaaggaca ccaccatgac
    15901 cacggcgaat ttgacccgca cgtctggaac gaccccgtcc tcatgtccgc ctatgcccaa
    15961 aacgtcgccg aagccctgat aaaggccgac cccgaaggca aagtttatta tcaacaacgc
    16021 ttgggcaact accaaatgca gctcaaaaaa ctgcacagcg acgcacaagc cgcatttaac
    16081 gccgtccctg ccgccaaacg caaagtcctg accgggcacg atgccttttc ctacatgggc
    16141 aaacgttacc atatcgaatt catcgccccg caaggtgtga gcagcgaagc cgagccttca
    16201 gccaaacaag tcgccgccat catccgacaa atcaaacgcg aaggcatcaa agccgtattc
    16261 accgaaaata tcaaagacac ccgcatggtt gaccgtatcg ccaaagaaac cggtgtcaac
    16321 gtcagcggca aactgtattc cgacgcactc ggcaacgcgc ccgcagacac ctacatcgga
    16381 atgtaccgcc acaacatcaa agccttgacc aacgcgatga agcaataaaa ccgtttgatt
    16441 ggtttgaatt tgaaaaggca aaaggccgtc tga
//
LOCUS       DAXHKG010000037        16069 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.037, whole genome shotgun sequence.
ACCESSION   DAXHKG010000037 DAXHKG010000000
VERSION     DAXHKG010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.037"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(308..730)
                     /locus_tag="ACFMWP_000911"
     CDS             complement(308..730)
                     /locus_tag="ACFMWP_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HFC5891538.1"
                     /translation="MQVTSKWIDGMCFVGTTESGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(848..1519)
                     /locus_tag="ACFMWP_000912"
     CDS             complement(848..1519)
                     /locus_tag="ACFMWP_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HFC5891539.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QSAKP"
     gene            complement(1535..2161)
                     /gene="purN"
                     /locus_tag="ACFMWP_000913"
     CDS             complement(1535..2161)
                     /gene="purN"
                     /locus_tag="ACFMWP_000913"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HFC5891540.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLHHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGVVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2268..3074)
                     /locus_tag="ACFMWP_000914"
     CDS             complement(2268..3074)
                     /locus_tag="ACFMWP_000914"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC5891541.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAASEPAAASAAQGDTSSIG
                     STMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQEVMM
                     KFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGEGKQP
                     SKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEATFYI
                     PSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3333..3773)
                     /locus_tag="ACFMWP_000915"
     CDS             complement(3333..3773)
                     /locus_tag="ACFMWP_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HFC5891542.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3836..5242)
                     /locus_tag="ACFMWP_000916"
     CDS             complement(3836..5242)
                     /locus_tag="ACFMWP_000916"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HFC5891543.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLVDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5412..6527
                     /gene="lptF"
                     /locus_tag="ACFMWP_000917"
     CDS             5412..6527
                     /gene="lptF"
                     /locus_tag="ACFMWP_000917"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HFC5891544.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6524..7594
                     /gene="lptG"
                     /locus_tag="ACFMWP_000918"
     CDS             6524..7594
                     /gene="lptG"
                     /locus_tag="ACFMWP_000918"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HFC5891545.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGIWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7905..10490
                     /gene="acnB"
                     /locus_tag="ACFMWP_000919"
     CDS             7905..10490
                     /gene="acnB"
                     /locus_tag="ACFMWP_000919"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HFC5891546.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHTL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFTSRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIADGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10632..11627
                     /locus_tag="ACFMWP_000920"
     CDS             10632..11627
                     /locus_tag="ACFMWP_000920"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HFC5891547.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDG
                     IEYRGFAQETVEELTKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(11851..12864)
                     /gene="ilvC"
                     /locus_tag="ACFMWP_000921"
     CDS             complement(11851..12864)
                     /gene="ilvC"
                     /locus_tag="ACFMWP_000921"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HFC5891548.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(12944..13237)
                     /locus_tag="ACFMWP_000922"
     CDS             complement(12944..13237)
                     /locus_tag="ACFMWP_000922"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004521031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HFC5891549.1"
                     /translation="MSNIKIVALVTVKPEYTETLVAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAA"
     gene            complement(13304..13795)
                     /gene="ilvN"
                     /locus_tag="ACFMWP_000923"
     CDS             complement(13304..13795)
                     /gene="ilvN"
                     /locus_tag="ACFMWP_000923"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HFC5891550.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            complement(13806..15533)
                     /gene="ilvB"
                     /locus_tag="ACFMWP_000924"
     CDS             complement(13806..15533)
                     /gene="ilvB"
                     /locus_tag="ACFMWP_000924"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HFC5891551.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKVDIPIVGDVKNVLSEMVALW
                     QKQEFMPSEDALGKWWKTIEEWRSQDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
BASE COUNT         3777 a         4366 c         4068 g         3858 t
ORIGIN      
        1 aataaattaa tatatggctt aaaataacgg gatgcccgcc ttccgcccgc ccgcagaagc
       61 aggcgggtat cattttaaaa cgcggcattt aaaatttgac cgaaaattgt tgacaatccg
      121 gaatcaagtc tgcacaatac cccgacaagt ccaagtatta taaaggctga ataaagagga
      181 aacagcaggc agatatattc gggaggtgca gtccgaatat atctgctttt ttatgcgcct
      241 ccggattgcc tgccgcacct ttcccttcag acggcatcag ccgtttcccc ataatgccgc
      301 ccgatgccta tttatctgcc ccggcaattt caaaactgtg ggtaatcttt gccgctttgc
      361 ccaacataat cgaagccgaa cagtattttt cggcagacat ctgaacggcg cgctcaatgg
      421 ccgattcttt caaatcatgc ccgaatactt tgaaatggat gtggatttcg gtaaacacgc
      481 gcggcgcatc gtccgcccgt ttcgccgtaa ccgtcgcacg gcagtcagtc actttctgac
      541 gctgtttttc ggcaatcatc accacatcga tgctcgaaca gcccgccacg cccaacagca
      601 gcatttccaa agggctgggc ccgcgcttgg ccgcaccttc tgccgccgaa ccctccataa
      661 cgacgctgtg cccgctttcc gtcgtgccga caaagcacat tccgtctatc cattttgatg
      721 taacctgcat ggtgtcattc ctgaaaatag cgttaaaacc gctttgcata tggcgttatt
      781 gtaaacaatt tcaagcggct tatgcagaaa tatggacaaa acggcaaaaa aacgcctgaa
      841 aaccgattta cggtttggcg gactggccat tgatctgcac cgatttgagt ttcagcgtat
      901 aggttttgcc gtcgtcggta tagccgattt gtgccggaat attgttcagg gacggtgcga
      961 agaaatacat taccgtatcg tcgccgcgcc gcacccgata tttgacgact tcggtttcca
     1021 cgccgcctat gctgtatttt cctgtacccg ccttattcaa accgccgacg gaataaagtt
     1081 ttttgccgtt ggtgattttc agccccgggg ggagtttcgc gtcatttgcc gccaactgcc
     1141 aggcaagcgt gaacaaatcc atagccttgg ggctttgctc ggttttgctc tcgcccgctt
     1201 tgccgtaggt tacgctgccg tcggcgaatt tggcttccgc atacagtttg cccctgcgta
     1261 tgtctctata gtaggtaggg tgcagggtat tgccgacaac cgtaccgccg gactcgaaac
     1321 ggatattgta tagcggcact ttaatcgtcg aaacgatttt gtaagcattg ccgctgcgtt
     1381 caaatgtcat cgtggcggga atgccgtagc tgccggaata gtgcagcacg gcggattggg
     1441 gcagccctgc cgcatacgcg cacggcaggg cggcggacaa aatggcggcg gaaaatatat
     1501 ttttaaaagt cttcatcatt tgctcccgcc cggtttacgc cgtcagaaaa cgggcggcat
     1561 cggcgttttc cgaatttctg acgcggtttc cctcgataat caggcggccg gcggcaaaat
     1621 cggcaacggc tttcggatag agtttatgct cgacagccaa aacccgggcg gcaacatcgt
     1681 ctgccgtatc gccgtcgagt atcggcacaa ccccttgcga tacaatcggg ccgcaatcca
     1741 gttcggcagt aacgaaatgg atggtgcagc cggcaacgcg acaacctgcc tccaaagcgc
     1801 gttcgtgcgt atgaagtcca gtaaacgagg gaaggatgga cgggtgaatg ttcatcagcc
     1861 tgccttcgta atgggcacag aactcagggg tcagaatccg cataaaacct gccaaaacca
     1921 ccaagtcggg ttgatatgcg tcgatttttt ccatcatggc ggtatcgaag gcaagtcgtg
     1981 attcaaagtt tttatgatgc aggctgtcgg tcgggatgcc gcgttcggcc gcccattgca
     2041 aaccggcagc cgtttcgctg ttgctcaaca cggcggcaat gcggacgttg ggaatggcgg
     2101 cattgacgat tgcctgcata ttgctgccgc gtccggaaat caggatgacg atgtttttca
     2161 taatggtacg cttttgaaag ggatgccgtc tgaaccgctg tttggtggtt tcagacggca
     2221 tttgccgtaa aaatgcccga aaacctgttt cgggcatgga ttcggactta atttactttt
     2281 ttgatgtcga cttgagccgg ctgcttggcg ggcgcgtttt cgggtgcgcc gattttgacc
     2341 agtttcacat caaataccaa agtggcgttc gggccgattt tgtcgcccgc accctgttcg
     2401 cggtaggcaa ggttggacgg gatgtagaac gtggcttcgc cgccttcttt cagaagctgt
     2461 acgccttcgg tccaacccgg aatcacttgg ctcaaaggga aggtgaccgg gccgccgttg
     2521 gctttgctgc tgtcgaatac cgtaccgtca atcaggcggc cttcgtattc cacggtaacg
     2581 atgtcgtctt tggacggctg tttgccttca ccctgtttgg tgattttgta ttgcaggccg
     2641 gaagcagtgg tcttcacgcc gtctttggcg gcattttctt tcagaaaggc ttcgcctttt
     2701 tctttattgg ccttcgcgtc cgccttgtgt ttttctacgg ctttagcctg ttgttcctga
     2761 aggaatttca tcatgacttc ctgagcctgc tcttcagtca ttttgatttc tttgccgtca
     2821 tacactgcct gcatggcttc ggtaaagact ttcaaatcga tttccgcacc ctgttccttc
     2881 atttgcttca gggagcgtcc gatgtccacg cccatcgcat agcttgcctg ctgcatcgtg
     2941 ctgccgatcg aagaggtgtc gccctgcgcg gcagaagcgg cggcaggttc ggatgcggct
     3001 tcttttttgc cacaggcgga aagtgccaaa gcggcggaaa gggtcagtgc gctgattttg
     3061 aaaatggtgt tcatgatgga tcttcgctgt cgataaggtc ggaaaaacgg gattatagcc
     3121 gagtttgaat gtttcaacac acaggatgac acataaagcg tcaatcgtgt gttgccctgt
     3181 tttggaaggg attgaacctt ccaaaataag ttttgattct accgccccga gggacagatg
     3241 tccaagtggc ggggttcaac cgataaggaa attttaatca aatagaatca agcctgttta
     3301 aattttgtaa atgcggcatt tcagacggca ttttatgcct tgccctccat gccgtgatgt
     3361 tcgatggcaa aaccgcttcg gcggtaggcg gtaaagcgtt cgcgcgcgtc ggcgagatct
     3421 tccaagctgt tgccgacgat ttccaaaacg cgcgcgggca agaccggagc ggtgttccaa
     3481 aaaccgtcgg acaggttcaa aacagtcatg ccttcgggaa ttcggggcgg attgccgccg
     3541 caagcaagca ggacggatgt ttcagacggc atggcttctt ccatttccca aatttcgtgc
     3601 ggaatgaaac tctcggcttc gtattgccaa agcattttgt ccaattcctg aagccgcccg
     3661 aacgaatcgg accacaccag tatcctgccg ccgtcccgaa tcgcacgggc aatcaggcgg
     3721 caggtgaaaa tcggaacttg ggcaacgtgc gtgtaaaagg tggctttcgg catattgttt
     3781 gagcatttgg caggacgatg ccgtctgaaa ggcttcagac ggcattgtgg caaaattaaa
     3841 gattccgcag atagttcagc agcaagggaa cgggacggcc agtcgcacct ttttccgctc
     3901 cggatttcca cgccgtaccc gcgatgtcaa ggtgcgccca cgggtagcct tcggtgaagt
     3961 aagacaggaa tgttgcggcg gtaatcgtgc ccgcgccggg cgtgccgata ttggggatgt
     4021 cggcaaagtt ggatttgagc tggtctttgt aggtttcaaa gagcggcagt tgccacgctt
     4081 tgtcgtccac gttgtaggaa gcggcaagca ggctgtcgac caaatcttga ttgttgccca
     4141 tcacgccgct gacatcgtgc cccaaggcga caatacacgc gccggtcagg gtggcgacgt
     4201 cgatgacggc tttgggtttg aactgttcgg cgtaagtgag cgcgtcgcac aaaatcagac
     4261 ggccttcggc atcggtgttc aacacttcga tggtcagacc tttcatactt ttcacgacat
     4321 cgcccggttt gtttgccgcg ccggaaggca tattttcaca agtggcgacg acggcaatca
     4381 ggttaatcgg cagttgcagt ttgacggcgg cgcagaaggt gctgatgacg gttgccgcgc
     4441 cgcacatatc aaacttcatt tcgtccatgt tcaggccggg tttgagggaa atgccgccgg
     4501 tgtcgaaggt aatgcctttg ccgaccaata ccacaggcgc ggcttctttg tccgccgcac
     4561 cgaaatagct cagttcgacc aaatagggat cttcgacact gcctttggcg accgaccaaa
     4621 acgaacccat gttttctttg atgtagtctt tttcgatgat tttggcgtgc gcgcccagtt
     4681 tttcggcttc ggctttggcg gtgcgcgcta aaaattcggg cgtgcattcg ttgggcgcgg
     4741 cgttgcccaa gtcgcggcag aggctttgtc cgtaaacttg cgcttcggcg acgcgcaagg
     4801 cttctttaac gacggcttcg tgtgcgctgt ggaacacggc ggtttcaaat ttggcgggct
     4861 tggcttcttt tttgtagcgg tcgaaacggt aggcggcgtt gccgaacgca atcgcaaacg
     4921 cttcggctac ggcggcggct tgcgcttcat cgaaggcatg gatgtccaca ttgaccgttt
     4981 cctgattttg cgcccatttg gcggcttcgg cggcggcctt gttcaatgcg gcgcggccgg
     5041 tgcttttcag acagcatacg gcaacagcct gcaaaccgtt gcctgtcggg atttttgtgt
     5101 cggcaaaatt ttgaccttct tcaagcgaag acaaaagggc aagggcggtc ggatggttta
     5161 attgcgcctc ttcggtgcag acaaataact gtgcgcctgc ctgctgttcc tgcaagattt
     5221 cggtttttgt gctaaattcc acgtttattc tcctgattga gacggttgtc ggtagttttc
     5281 ggacggcctt tcgctcaaaa gaccgtctga agacggctgg cacgattgta ccccatttga
     5341 agcaccgtct gaaaccttgc gcggacaatc cgcctgcgcc gaaccgctta ccgccccctg
     5401 accgcgattc tatgatttat caaagaaacc tcatcaaaga actctctttt accgccgtcg
     5461 gcattttcgt cgtcctcttg gcggtattgg tctccacgca ggcaatcaac ctgctcggcc
     5521 gtgccgccga cgggcgtgtc gccatcgatg ccgtgttggc attggtcggc ttctgggtca
     5581 tcggtatgac gccgcttttg ctggtgttga ccgcatttat cagtacgttg accgtgttga
     5641 cccgctactg gcgcgacagc gaaatgtcgg tctggctatc ctgcggattg gcattgaaac
     5701 aatggatacg cccggtgatg cagtttgccg tgccgtttgc cgttttggtt gccgtcatgc
     5761 agctttgggt gataccgtgg gcagagctac gcagccgcga atacgctgaa atcctgaagc
     5821 agaagcagga attgtctttg gtggaggcag gcgagttcaa cagtttgggc aagcgcaacg
     5881 gcagggttta ttttgtcgaa accttcgata ccgaatccgg catcatgaaa aacctgttcc
     5941 tgcgcgaaca ggacaaaaac ggcggcgaca acatcatctt cgccaaagaa ggtaacttct
     6001 cgctgaacga caacaaacgc acgctcgaat tgcgccacgg ctaccgttac agcggcacgc
     6061 ccggacgcgc cgactacaat caggtttcct tccaaaaact caacctgatt atcagcacca
     6121 cgcccaaact catcgacccc gtttcccacc gccgtaccat tccgaccgcc caactgattg
     6181 gcagcagcaa cccgcaacat caggcggaat tgatgtggcg catctcgctg accgtcagcg
     6241 tcctcctact ctgcctgctt gccgtgccgc tttcctattt caacccgcgc agcggacata
     6301 cctacaatat cttgattgcc atcggtttgt ttttaattta ccaaaacggg ctgaccctgc
     6361 tttttgaagc cgtggaagac ggcaaaatcc atttttggct cggactgctg cctatgcaca
     6421 tcatcatgtt cgtcatcgca atcgtacttc tgcgcgtccg cagcatgccc agccagccct
     6481 tctggcaggc ggttggcaaa agtctgacat tgaaaggcgg aaaatgaacc tgatttcacg
     6541 ttacatcatc cgtcaaatgg cggttatggc ggtttacgcg ctccttgcct tcctcgcttt
     6601 gtacagcttt tttgaaatcc tgtacgaaac cggcaacctc ggcaaaggca gttacggcat
     6661 atgggaaatg ctgggctaca ccgccctcaa aatgcccgcc cgcgcctacg aactgatgcc
     6721 cctcgccgtc cttatcggcg gactggtctc tctcagccag cttgccgccg gcagcgaact
     6781 gaccgtcatc aaagccagcg gcatgagcac caaaaagctg ctgttgattc tgtcgcagtt
     6841 cggttttatt tttgctattg ccaccgtcgc gctcggcgaa tgggttgcgc ccacactgag
     6901 ccaaaaagcc gaaaacatca aagccgccgc cattaacggc aaaatcagca ccggcaatac
     6961 cggcatttgg ctcaaagaaa aaaacagcat tatcaatgtg cgcgaaatgt tgcccgacca
     7021 taccctgctg ggcattaaaa tctgggcccg caacgataaa aacgaactgg cagaggcagt
     7081 ggaagccgat tccgccgttt tgaacagcga cggcagttgg cagttgaaaa acatccgccg
     7141 cagcacgctt ggcgaagaca aagtcgaggt ctctattgcg gctgaagaaa actggccgat
     7201 ttccgtcaaa cgcaacctga tggacgtatt gctcgtcaaa cccgaccaaa tgtccgtcgg
     7261 cgaactgacc acctacatcc gccacctcca aaacaacagc caaaacaccc gaatctacgc
     7321 catcgcatgg tggcgcaaat tggtttaccc cgccgcagcc tgggtgatgg cgctcgtcgc
     7381 ctttgccttt accccgcaaa ccacccgcca cggcaatatg ggcttaaaac tcttcggcgg
     7441 catctgtctc ggattgctgt tccaccttgc cggacggttc ttcgggttta ccagccaact
     7501 ctacggcatc ccgcccttcc tcgccggcgc actacctacc atagccttcg ccttgctcgc
     7561 tgtttggctg atacgcaaac aggaaaaacg ttgaaccaat gccgtctgcc ccccttcgga
     7621 cggcattggt ttttattatc atattcccgc agacagatag ccgttcccta ttatagtgga
     7681 ttaacaaaaa ccagtacggc gttgcctcgc cttgccgtac tatttgtact gtctgcggct
     7741 tcgtcgcctt gtcctgattt ttgttaatcc actatacatt acctgtcata acagttccat
     7801 ttttgttaaa actagtctat gatagcggta caaatattgt ttacaatatt taacgcaaat
     7861 catttgcaac ccgacaaaag aaaaacagaa aaaggaacaa agagatgtta gaagcctatc
     7921 gtaaagccgc cgccgagcgc gccgccctcg gcattcccgc cctccctttg aacgcgcagc
     7981 aaaccgccga tttggttgag ctgctgaaaa gcccgcccgc aggcgaaggc gagttcttgg
     8041 tcgaactgct tgcccaccgt gttccgcccg gtgtggacga tgccgccaaa gtcaaagcct
     8101 cattcctggc tgccgttgcc gaaggcagcg cgtccagccc gctgatctcc cccgaatatg
     8161 cgaccgaact cttaggtacg atgctcggcg gttacaatat ccacacctta atcgaactct
     8221 tggacgacga caaactcgcg cccattgccg ccaaaggctt gaaacatacg cttctgatgt
     8281 tcgattcctt ccacgacgtt caggaaaaag ccgaaaaagg caacaaatac gcgcaagaag
     8341 ttttgcaatc ttgggcagat gccgaatggt ttacctcacg cgccaaagtt cccgaaaaaa
     8401 tcaccgttac cgttttcaaa gttgacggcg aaaccaatac agacgacctc tcccccgcgc
     8461 ccgacgcgtg gagtcgtccc gatattccgc tgcacgcgct ggccatgctg aaaaacccgc
     8521 gcgacggcat cacgcccgac aaaccgggcg aagtcggtcc gattaaattg ttggaagaac
     8581 tcaaagccaa aggccatccg gttgcttacg tcggcgacgt ggtcggtact ggttcttcac
     8641 gcaaatccgc gaccaactcc gtcatttggc ataccggcga agacattccg ttcgtgccga
     8701 acaaacgctt cggcggcgtg tgcttgggcg gcaaaatcgc gccgattttc ttcaataccc
     8761 aagaagactc cggcgcgctg ccgattgaag tcgatgtttc cgctctaaaa atgggcgatg
     8821 tcgtcgatat cctgccttat gaaggcaaaa tcgtgaaaaa cggcgagact gttgccgagt
     8881 ttgaattgaa atcacaagta ttgctggacg aagtgcaagc cggcggccgt atcaacctga
     8941 ttatcggccg aggtctgacc gccaaagcgc gcgaagccct gaaactgcct gcctctactg
     9001 cattccgcct gccgcaagcg cctgccgaaa gcaaagccgg tttcaccttg gcgcaaaaaa
     9061 tggtcggccg cgcctgcggt cttcccgaag gacaaggcgt gcgtccgggt acttactgcg
     9121 aaccgcgtat gacgacggtc ggctcgcaag acacgaccgg cccgatgacc cgcgacgagt
     9181 tgaaagactt ggcttgtttg ggcttctccg ccgatatggt gatgcagtct ttctgccaca
     9241 ccgccgccta tccgaaacct gtcgatgtaa aaacccataa agaactgccc gcctttattt
     9301 ccacccgtgg cggcgtgtcc ctgcgtccgg gcgacggcgt catccactcg tggctcaacc
     9361 gcctgctgct gcccgatacc gtcggcaccg gcggcgacag ccacacccgt ttccccatcg
     9421 gtatttcctt ccccgccggc tctggcttgg ttgcctttgc cgccgcaaca ggcgtaatgc
     9481 cgctcgatat gcccgagtct gtattggtac gcttcagcgg caaactgcaa ccgggtgtaa
     9541 ccctgcgcga tttggtgaac gccattccgc tgtacgcaat caaacaaggt ttgctgaccg
     9601 ttgccaaagc cggtaagaaa aacatcttct ccggccgcat cctcgaaatc gaaggcctgc
     9661 ctgatttgaa agtggaacaa gcctttgaat tgaccgacgc atccgccgaa cgctccgccg
     9721 ccggctgtac cgtgaagctc aacaaagagc cgattatcga gtacatgaaa tccaacgtcg
     9781 tgttgatgaa aaacatgatt gccgacggct atcaagaccc gcgtactttg gaacgccgca
     9841 tcaaagccat ggaaaaatgg ctggcaaatc ccgagttgct cgaagcggat aaagatgccg
     9901 aatacgccgc cgtgattgaa atcaacatgg acgacatcaa agagccgatt atcgcctgcc
     9961 cgaacgaccc ggacgacgtg tgcttcatgt ccgaacgctc cggcaccaaa atcgacgaag
    10021 tattcatcgg ttcgtgtatg accaacatcg gccacttccg cgccgcctcc aaacttttgg
    10081 aaggcaaggc agacaccccc gtccgcctgt ggattgcgcc gccgaccaaa atggacgcga
    10141 aacaattgtc cgacgaagga cactacggcg tactcggacg tgccggcgcg cgtatggaaa
    10201 tgccgggttg ctccttatgt atgggtaatc aggcgcaagt acgcgaaggt gcgaccgtta
    10261 tgtccacctc cacccgcaac tttccgaacc gtttgggtaa aaacaccttt gtttacctcg
    10321 gttcggcgga attggcagcg atttgctcca aactgggtaa aatcccgacc gttgaagaat
    10381 atcaagccaa tatcggcatc atcaacgaac agggcgataa aatctaccgc tatatgaact
    10441 tcaacgaaat cgacagctac aacgaagtag ccgagaccgt gaacgtttaa tccccgtcat
    10501 ccgtatgaag taagggattg accgcaatgc cgtctgaaca accttcagac ggcattgcaa
    10561 cattccgcta acccttcttt ccgcaaacgc tgcaaatacg gcgttcacgc ccccacataa
    10621 aggaaacgac agtgaacctg aaaaaccgcc attttctgaa acttttagac ttcacgccag
    10681 aagaaatcac cgcctacctc gaccttgccg ccgaattgaa agccgccaaa aaagcagggc
    10741 gcgagattca gcggatgaaa gggaaaaaca tcgccctgat ttttgaaaaa acctctactc
    10801 ggacgcgctg cgcgtttgaa gtcgccgcgc gcgatcaagg cgcgggagtg acttatttag
    10861 agccgtccgc cagccaaatc gggcataagg aaagcatcaa agacaccgcc cgcgtgttgg
    10921 gcaggatgta cgacggcatc gaatatcgcg gcttcgctca ggaaactgtc gaagaattga
    10981 cgaaatacgc gggcgtaccc gtgttcaacg ggctgaccaa cgagttccat cccacacaaa
    11041 tgcttgccga cgcactgact atgcgcgaac acagcggcaa acctttgaac caaaccgcgt
    11101 ttgcctacgt cggcgacgcg cgttacaaca tgggcaattc cctgctgatt ttaggggcaa
    11161 aattggggat ggacgtgcgt atcggcgcac cgcaaagcct gtggccgtct gaaggcatta
    11221 ttgccgccgc acacgccgcc gccaaagaaa ccggcgcaaa aattaccctg accgaaaacg
    11281 cgcatgaagc cgtgaagaat gttgatttta ttcataccga tgtgtgggtc agcatgggcg
    11341 agccgaaaga agtctggcag gaacgcatcg atttgctgaa agattaccgc gttacgcccg
    11401 aactgatggc ggcatcgggc aatccgcaag tcaaattcat gcactgcctg cccgccttcc
    11461 acaaccgcga aaccaaagtc ggcgaatgga tttacgaaac cttcgggctg aacggtgtgg
    11521 aagttacaga agaagtattc gaaagccccg ccagcatcgt gttcgatcag gcggaaaacc
    11581 gtatgcacac gattaaagcg gtaatggtcg cggctttggg cgactgacag aactgtgcct
    11641 gtttaaattc atccgcaaca cagataccgt ctgaacacga tgttcagacg gtatccatat
    11701 atagtggatt aaatttaaac cagtacggcg ttgcctcgcc ttgccgtact atttgtactg
    11761 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctataaaaaa actgcctaca
    11821 cgatgtgtag gcagtcccgt ttgaaaacaa tcagtttttg tcttggtcaa ccaatttgtt
    11881 ggcagtaatc caaggcatca tggcacgcag ttgtgcgccg actttttcaa cttggtggtc
    11941 ggcattcaga cggcggcggg cagtcataga cgcgtagttg acattaccct cttggataaa
    12001 catttttgcg tattcgccgg tttgaatgcg tttcagggca ttgcgcatgg cttctttgct
    12061 ggaagcattg accacttcag ggccggtaac gtattcgccg tactccgcat tgttggaaat
    12121 ggagtagttc atattggcaa taccgccttc gaaaatcagg tcaacaatca gtttcatttc
    12181 gtgcagacat tcgaagtaag ccatttcagg cgcgtaaccg gcttcggtca gggtttcaaa
    12241 acccgccttg atcaactcga ccacgccgcc gcacaatacg gcttgttcgc caaacagatc
    12301 ggtttcggtt tcttcgcgga aagtggtttc aatcacaccg cctttggtgc cgccgttggc
    12361 agccgcataa gacagggcga tgtctttggc tttgccggaa ttgtcttggt aaacggcaat
    12421 cagagaaggc acgccgccgc cgcgtttgta ttcactgcgt acggtatgac ccggaccttt
    12481 gggggcaacc ataatcacgt ccaagtcggc acgcggaacg atttggttgt agtgcacgtt
    12541 gaagccgtgt gcaaatgcca gcgttgcgcc ttctttcaaa ttggctgtaa cttcggcgtg
    12601 atagacggca ggcatggttt cgtcaggcag cagcagcata acgacatcgg cttctttggt
    12661 cgcttcagca acggttttga cgacatggcc ggctgcttcg gcttttttcc aagaagaacc
    12721 ttggcgcaga ccgatcacca cgtttacacc cgaatctttc aggttggcag catgggcatg
    12781 accttgcgaa ccgtaaccga tgatggcaac ggttttgcct ttgattaggg acagatcggc
    12841 atctttatcg taatagactt gcatttgatt tcctttaagg taaatggttg tcgaagcctt
    12901 aaaatgttga gcggcttcag acgggttaaa cagagtgtgc cgcttaagcg gcaacttcat
    12961 tcatcaatac gatttccaac gcttcggttt tgccgtcgac ggactggacg aaggcttgga
    13021 aatgcgcgct ggcgttatgt tcgtcaatag ctgcttggga tttccaattt tccacgaaaa
    13081 caaaacggtt cggtttaccg atttcctgat ggagatcgta gctgatgttg ccctcttctg
    13141 cacggctggc tttgaccagt tctttaaact gtgctaccag tgtttctgtg tattccggtt
    13201 tgacggtaac cagtgcgaca attttaatgt tcgacataaa tctctcctgc cgttcgtttt
    13261 tcagacggca ttcaaatacc gtgccgtctg aaaggttacg gcgttaaatt ttcaaaatac
    13321 gctcaccgcg accgatgccg gccgcgcctg tacgtacggt ttccaaaatt tgggcgcgtc
    13381 cgaccgtttc caaaaaggaa tccagcttgt cggtcgagcc ggtaatttca atcgtatagc
    13441 tgcggtcggt tacgtcgatg atgctgcccc ggtagatttc ggtcaaacgc aaaaattcgt
    13501 cgcggtcttt gccggcggca cggactttta ccaacatcag ttcgcgttcg acaaaacggc
    13561 tttcgttcaa atcgaccact ttaatcactt caatcaattt attgagttgc ttggtgattt
    13621 gttcgataac ctgctcgtcg ccgtgggtaa cgatggtcat acgggacagg gttttgtctt
    13681 cggtcggcgc aaccgccaaa gaatcgatat tgtaatcgcg tgcagagaac aaaccgacca
    13741 cgcggctcat cgcacctgat tcgttttcaa tcagaacaga taagatatgt cgcatttgcc
    13801 tctccttacg ccttttcgtc cgcacgcata tgcggcggaa gtaccatttc gtccaaacct
    13861 ttgccgttgc cgaccatggg catcacattc tgtttctggt cggtcaggaa gtcgataaac
    13921 accagcctgt ctttttggtt caatgcttcc aacaacgcac cttccacatc agacttcttg
    13981 tccacgcgga taccgatatg gccgtatgcc tcggcaagtt tgacgaaatc gggcaaagaa
    14041 tcgaaataag tttccgactc tcggccgccg taatatattt cctgccactg gcgtaccata
    14101 ccgagataac cgttgttcag cgtaatgacg ttaaccggaa tccgatattg gaaacaggtg
    14161 gacaactctt ggatgttcat ctggatcgag ccgtcgccgg taatacagaa tacgtcttga
    14221 tccggggcgg caagttttgc accaatcgca taaggcagac ccacgcccat cgtacccaaa
    14281 ccgccggaat tgagccattg gcgcggacgt tcgaagggat aatattgagc cgcaaacatt
    14341 tgatgctgcc ctacatccga tgtgatgatt gccgaattgc cggtaatctc ggcaagcttc
    14401 tgaatcacat attgtggctt gataatttcg ctgccgttgt caaaccacaa gcaatcttgg
    14461 gaacgccatt cctctatggt tttccaccat ttgcccaaag catcttcaga cggcatgaac
    14521 tcttgttttt gccacagcgc aaccatctca gacaaaacat ttttcacgtc gccgacaatc
    14581 ggaatgtcca ccttcacgcg tttggcgatg ctggaaggat cgacatcgat atggataacc
    14641 ttcttcgcct tctcgaaaaa tttggacggt acggaaacca cacggtcgtc aaaacgcgca
    14701 cctacggcaa gaacgacatc cgcattctgc atggcaaggt ttgcctcgta agtaccgtgc
    14761 ataccgagca taccgaggaa ttggcggtcg ccggaaggat aagcgcccaa gcccatcagc
    14821 gtacccgtgc acggagcacc cgtcattcgg acaaatcggg tcagctcttc agaagcatta
    14881 cccaacacca cgccgccgcc aaaatagacg accggacgtt tggcagatgc caacatctgc
    14941 acggcctttt taatctgacc gatatgccct tgaacaaccg gttgatacga acggataaaa
    15001 atgtcttcct gaggatagct gaatttcgcc atcgcctgcg taacatcttt cgggacatca
    15061 accaccacgg gccccggtcg gccgcttgcg gcaatttgga acgccttttt aatggtttcc
    15121 gccaactcat tgatgtccgt aaccaggaaa ttgtgtttga cgcacggacg ggtaataccc
    15181 accgtatcaa cttcttggaa cgcatccgta ccaatcaggg aattgcctac ctgcccgctg
    15241 atgaccacca tcggaatcga atccgtatag gcagtagcaa taccggtcag tgcattggta
    15301 acgcccgggc cggatgtaac caatgccacg cccaccttac cgctgacgcg cgcatacgca
    15361 tctgccgcgt gtactgccgc ctgctcgtga cgggtcagaa tgtgcttgaa tttattgagt
    15421 tggaaaaggg catcgtagat ttcgataacc gcaccgccgg gataaccgaa aacgtactcg
    15481 acaccttcgg ctttgagact ctgcactatg atttgcgcgc ctgataactg cataacgacc
    15541 tcttttatac ggtttcaaac caatagggac aaaccgcttt gccacagcac ctgtaatgca
    15601 attccaccaa gcagcgattt agggtacgcg cattggggga acacggcaac agacggatta
    15661 tccaatcaat tggaaaggaa cacagagttt gtgaaaaaga gtagaaacga taacgcaaac
    15721 cgacagttca atcaagaaaa atctttcatc ttttaatatt ttttgaaagc agagaaatta
    15781 ttgattgatt ttaaaagaat aaaatcagga gtaccttttt tgaaagatgg aaattgttga
    15841 cagtttgtgt aggaggggca gatgtgaaaa acccttcttc gatatcaaga attgtaaaat
    15901 ttacagggtt tcatcccaat aaagactcgg gatattgatt gaacttgatt ttatttttga
    15961 tatatcaaaa atattcccaa ccatacttcc tgaaaatggc tcattgcacc ggactgtatt
    16021 ggacggcatt gacagaacca agagggctaa caacgactta atatattga
//
LOCUS       DAXHKG010000038        15528 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.038, whole genome shotgun sequence.
ACCESSION   DAXHKG010000038 DAXHKG010000000
VERSION     DAXHKG010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15528
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.038"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            6..81
                     /locus_tag="ACFMWP_000925"
     tRNA            6..81
                     /locus_tag="ACFMWP_000925"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="ACFMWP_000926"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="ACFMWP_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HFC5891552.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="ACFMWP_000927"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="ACFMWP_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HFC5891553.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="ACFMWP_000928"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="ACFMWP_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HFC5891554.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="ACFMWP_000929"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="ACFMWP_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HFC5891555.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="ACFMWP_000930"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="ACFMWP_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HFC5891556.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="ACFMWP_000931"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="ACFMWP_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HFC5891557.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3592..7770
                     /gene="rpoB"
                     /locus_tag="ACFMWP_000932"
     CDS             3592..7770
                     /gene="rpoB"
                     /locus_tag="ACFMWP_000932"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HFC5891558.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7927..12102
                     /gene="rpoC"
                     /locus_tag="ACFMWP_000933"
     CDS             7927..12102
                     /gene="rpoC"
                     /locus_tag="ACFMWP_000933"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HFC5891559.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKVALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRERILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQE
                     VEQETAETQVTDE"
     gene            12360..12731
                     /gene="rpsL"
                     /locus_tag="ACFMWP_000934"
     CDS             12360..12731
                     /gene="rpsL"
                     /locus_tag="ACFMWP_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HFC5891560.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            12849..13319
                     /gene="rpsG"
                     /locus_tag="ACFMWP_000935"
     CDS             12849..13319
                     /gene="rpsG"
                     /locus_tag="ACFMWP_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HFC5891561.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13338..15443
                     /gene="fusA"
                     /locus_tag="ACFMWP_000936"
     CDS             13338..15443
                     /gene="fusA"
                     /locus_tag="ACFMWP_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HFC5891562.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4145 a         3447 c         4010 g         3926 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgt attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaaggc tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggtt cggtcgttct
     1741 gcctaaaggc accggtaaga taacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt actattttgg gtcctcgagg cttgatgcca aaccctaaag taggtactgt
     1981 tactcctaac gttgctgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgc gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 tcggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgccgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggtgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagccggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aaacatcaag tattgtttac
     3481 atttatttgc atagttttta tcaaatcatt gcaaataaat gtaaacatca gattgatgcg
     3541 tgccgttgct ttcaaacggc ctattattga aaattacttt tcggagtgta tatgagctat
     3601 tcgtttaccg agaaaaaacg tatccgtaag agttttgcaa agcgggaaaa tgttttggaa
     3661 gttcctttct tgctagcaac ccaaattgat tcttatgcga agtttttgca gctggaaaat
     3721 gcttttgaca aacgtaccga tgacggtctg caggcagcat ttaattctat tttcccgatt
     3781 gtgagccata acggttatgc gcgattggag tttgtgcatt acacattggg cgagcctttg
     3841 ttcgatattc ccgaatgtca gttgcgcgga atcacttatg cagccccctt gcgcgcgcgt
     3901 atccgtttgg tgattttgga taaggaagca tctaaaccga cggtaaaaga agttcgtgaa
     3961 aacgaagtgt atatgggcga aattccgttg atgaccccga gcggttcttt tgtgattaac
     4021 ggcacagagc gtgtgattgt ctcccagttg caccgttcgc ccggcgtatt cttcgagcat
     4081 gacaaaggta agacgcactc ttccggcaaa ttgttattct ccgcccgcat cattccctac
     4141 cgtggttcat ggttggattt tgaatttgat ccgaaagatt tgctgtattt ccgtatcgac
     4201 cgccgccgta aaatgccggt aacgattttg ttgaaggctt tgggctacaa caatgagcaa
     4261 atcttggata ttttctacga caaagaaacg ttctatttgt cttcaaacgg tgttcaaacc
     4321 gatttggtcg caggccgtct gaaaggcgaa actgccaagg tcgatatctt ggataaagaa
     4381 ggcaatgtat tggttgccaa aggtaagcgt attactgcga aaaatatccg tgatattacc
     4441 aatgcaggcc tgacccgttt ggatgtagaa ccggaaagcc tgctgggcaa agcattggct
     4501 gccgatctga ttgattcgga aaccggcgag gtattggctt ctgccaatga tgaaattaca
     4561 gaagagttgt tggccaaatt tgatatcaac ggcgtaaaag aaattacgac cctttacatc
     4621 aatgagttgg atcagggtgc ttatatctcc aataccttgc gtacggatga gactgccggc
     4681 cggcaggcgg ctcgtgttgc gatttaccgt atgatgcgtc cgggcgaacc gcccactgaa
     4741 gaggcggtcg agcaattgtt taaccgcttg ttcttcagtg aagacagcta cgatttgtcc
     4801 cgcgtaggcc gtatgaaatt taatacgcgc acatacgaac aaaaactgtc cgaagcccaa
     4861 caaaactctt ggtacggccg cctgctgaac gaaacgtttg ccggtgctgc cgacaaaggc
     4921 ggttatgtcc tgagcgtcga agatattgtc gcctcgattg cgactttggt cgagttgcgt
     4981 aacggccatg gcgaagtgga cgatatcgat cacttgggca accgccgagt acgttcggta
     5041 ggcgagctga ctgaaaacca attccgcagc ggtttggccc gtgtggaacg tgctgtaaaa
     5101 gaacgtttga atcaggcgga atcagaaaac ttgatgccgc acgatttgat taatgcaaaa
     5161 cctgtttctg ccgctattaa agaattcttc ggctccagcc aattgagtca gtttatggat
     5221 cagaccaacc ccttgtctga agtaacccat aaacgccgcg tatctgcatt gggtccgggc
     5281 ggtttgaccc gcgaacgtgc cggcttcgag gtacgggacg tgcatccgac ccactacggc
     5341 cgcgtatgtc cgattgaaac gcctgaaggt ccgaacatcg gtttgatcaa ctcattgtcc
     5401 gtttatgcgc gcaccaatga ttacggtttc ttggaaacgc cttaccgccg cgttatcgac
     5461 ggcaaagtaa ccgaggaaat cgattacttg tctgccatcg aagaaggccg ctatgtgatt
     5521 gcacaggcga atgccgattt ggattcagat ggcaatctga ttggcgattt ggttacctgt
     5581 cgtgaaaaag gcgaaaccat tatggcaacg cccgaccgcg tccaatatat ggacgtggca
     5641 accggccagg tggtatccgt tgcggcatcc ctgattccgt tcttggaaca tgatgacgcg
     5701 aaccgcgcat tgatgggtgc caacatgcaa cgtcaggcag tgccttgctt gcgtcctgaa
     5761 aaaccgatgg tcggtaccgg tatcgagcgt tccgttgccg ttgactctgc tactgcaatc
     5821 gttgcccgcc gaggcggcgt ggtcgagtat gtcgatgcca accgtgttgt gattcgtgtc
     5881 catgacgacg aagcgactgc cggcgaagtg ggtgtcgata tttacaactt ggttaaattt
     5941 acccgttcca accagtctac caatatcaat cagcgtcctg ccgtcaaagc cggcgatgtt
     6001 ttgcaacgcg gcgatttggt ggccgatggc gcgtccaccg atttgggcga attggctttg
     6061 ggtcaaaata tgaccatcgc cttcatgccg tggaacggtt acaactacga agactcgatt
     6121 ctgatttccg aaaaagtggc tgcggatgat cgttacactt cgattcacat tgaggaattg
     6181 aatgtcgttg cccgcgatac caagctgggt gcggaagaca ttacccgcga tattccgaac
     6241 ttgtccgagc gtatgcaaaa ccgcttggac gaatccggta tcgtttacat cggtgcagaa
     6301 gtagaagccg gcgatgtgtt ggtaggcaaa gtaacgccta aaggcgaaac ccaactgacg
     6361 ccggaagaaa aactgttgcg cgccatcttc ggcgaaaaag cgtctgacgt aaaagatact
     6421 tcactgcgta tgcctaccgg tatgagcggt acggttatcg acgttcaagt cttcactcgt
     6481 gaaggtattc aacgcgacaa acgcgcccaa tccattatcg attccgagtt gaaacgctac
     6541 cgtttggatt tgaacgacca attgcgtatt ttcgacaacg acgcattcga ccgtatcgaa
     6601 cgtatgattg tgggtcaaaa agccaatggt ggtccgatga agctggctaa aggcagcgaa
     6661 attactaccg aatatttggc gggtctgccg agcaggcacg attggttcga tatccgtctg
     6721 accgatgaag atttggccaa gcagttggaa ctgattaaag tgagcctgca acaaaaacgc
     6781 gaagaagcgg acgagttata cgaaatcaag aagaaaaaac tgacccaagg cgacgaattg
     6841 caacccggcg tacaaaaaat ggtgaaagtt tttatcgcca tcaaacgccg tctgcaagcc
     6901 ggcgacaaaa tggcgggccg ccacggtaac aaaggcgtgg tatcgcgcat tctgccagtg
     6961 gaagacatgc cttacatggc ggacggccgt ccggtagaca tcgtactgaa cccattgggc
     7021 gtaccttccc gtatgaacat cggtcagatt ttggaagttc acttgggttg ggcagcaaaa
     7081 ggtatcggcg agcgtatcga ccgtatgctg aaagagcaac gcaaagcagg cgagttgcgc
     7141 gagttcttga acagactcta caacggcagc ggtaagaaag aagatttgga cagcctgaca
     7201 gatgaagaaa tcatcgaatt ggcttccaac ctgcgtaaag gtgcatcttt cgcttctcct
     7261 gtattcgacg gtgcgaaaga gtctgaaatc cgcgaaatgt tgaacttggc ttacccaagc
     7321 gaagatcctg aggttgagaa actgggcttc aacgacagta aaactcaaat cacgctgtat
     7381 gacggccgtt caggcgaagc atttgatcgc aaggttacag tcggtgtgat gcactatctg
     7441 aaactgcacc acttggttga cgaaaaaatg cacgcccgtt ctaccggtcc atacagtctg
     7501 gttacccaac agcctttggg cggtaaagct cagttcggtg gccaacgttt cggtgagatg
     7561 gaggtttggg cattggaagc atacggtgcg gcatacacgc tgcaagagat gctgactgtg
     7621 aagtctgatg acgtgaacgg ccgtaccaaa atgtacgaga acatcgtcaa aggcgaacac
     7681 aaaatcgatg ccggtatgcc cgagtccttc aacgtattgg ttaaagagat tcgttcactg
     7741 ggcttggata tcgatttgga acgctactaa gcagaagttt tcagacggcc tttcaaggtc
     7801 gtctgaaaaa gcggtttcag aataagaatg aagcaatcgg catttaggcc gtctgaaatc
     7861 gaaagtaccg tttcccaata tcgaaaatcc gccacgcggt aaaaatactt ccttcaagga
     7921 gcaaaaatga atttgttgaa cttatttaat ccgttgcaaa ctgccggcat ggaagaagag
     7981 tttgatgcca tcaaaatcgg cattgcttct cccgaaacca tccgttcatg gtcttacggc
     8041 gaagttaaaa aacctgaaac catcaactac cgtacgttca aacctgagcg tgacggtctg
     8101 ttctgcgcca aaatctttgg tccggtcaaa gactacgaat gcttgtgcgg aaaatacaaa
     8161 cgcttgaaat ttaaaggcgt aacctgtgaa aaatgcggcg tagaagtgac cctgtccaaa
     8221 gtgcgccgcg aacgcatggg ccacattgaa ttggcagcac ccgttgccca tatttggttc
     8281 ttgaaatccc tgccttcccg cttgggtatg gtactggaca tgactttgcg cgacatcgaa
     8341 cgcgtattgt actttgaagc atttgtggta accgaccccg gtatgactcc gctgcaacgc
     8401 cgccaattgc tgactgaaga cgattactac aacaaactgg acgaatacgg cgatgacttc
     8461 gatgccaaaa tgggtgcgga aggtatccgc gaattgctgc gtaccttgaa tgtggcgggc
     8521 gaaatcgaaa tcctgcgcca agagttggaa tcgaccgggt ccgacaccaa aatcaaaaaa
     8581 atcgccaaac gtttgaaagt attggaagcc ttccaccgtt ccggtatgaa gctggaatgg
     8641 atgattatgg atgtgctgcc ggtattgccg cctgatttgc gtccgttggt tccattggat
     8701 ggcggtcgtt ttgccacttc cgatttgaac gatttgtacc gtcgcgtcat caaccgtaac
     8761 aaccgtctga aacgtctgtt ggaactgcat gcgcccgaca ttatcgtccg caacgaaaaa
     8821 cgtatgttgc aagaagcggt cgactctctg ttggataacg gccgtcgcgg taaagccatg
     8881 accggcgcca acaaacgccc gctgaaatca ttggcagaca tgattaaagg taaaggcggt
     8941 cgcttccgtc aaaacctgtt gggcaaacgt gtggactact ccggccgttc cgtgattacc
     9001 gtaggcccat acctgcgtct gcaccaatgc ggtctgccga aaaaaatggc tttggaactg
     9061 ttcaaaccgt tcattttcca caaattggaa aaacaaggtt tggcctctac cgttaaagca
     9121 gcgaaaaaat tggtagagca agaagtacca gaagtatggg acatcttgga agaagtcatc
     9181 cgcgaacatc cgattatgct gaaccgtgcg ccgaccctgc accgtttggg tattcaagcg
     9241 ttcgaaccta tcttgattga aggtaaagcg attcagttgc acccattggt gtgtgctgcg
     9301 ttcaacgccg actttgacgg cgaccaaatg gcggtacacg ttccattgag cttggaagca
     9361 caaatggaag cacgcacgct gatgctggct tcaaacaacg tattgtctcc tgccaacggc
     9421 gaaccgatta tcgtaccttc ccaagacatc gtattgggcc tgtactacat gacccgcgac
     9481 cgtatcaatg ccaaaggcga gggcagcctg tttgccgatg tgaaagaagt gcatcgcgca
     9541 taccatacca aacaggttga actgggtacg aaaattaccg tacgtctgcg cgaatgggtg
     9601 aaaaacgaag caggtgagtt tgagcctgtc gttaaccgtt acgaaacaac cgtcggccgt
     9661 gcattgttga gcgaaatcct gccgaaaggc ctgccgtttg aatatgtcaa caaagcgttg
     9721 aagaaaaaag aaatttctaa actgattaac gcatcgttcc gcctgtgcgg cttgcgcgat
     9781 acggttatct ttgctgacca cctgatgtac accggtttcg gatttgcggc aaaaggcggt
     9841 atttccattg ccgttgacga tatggaaatt ccaaaagaaa aagtggcctt gctggctgaa
     9901 gccaatgccg aggttaaaga aatcgaagac caataccgtc aaggtttggt taccaacggc
     9961 gaacgctaca acaaggtggt cgatatttgg ggtcgtgccg gcgataagat tgctaaagcg
    10021 atgatggaca acttgtccaa acaaaaagtt atcgaccgtg acggcaacga agtcgatcaa
    10081 gagtcattca actccattta tatgatggcg gactccggtg cccgtggttc tgcagctcag
    10141 attaaacagt tgtccggtat gcgtggcttg atggcaaaac ctgacggctc gattattgaa
    10201 acgccgatta cctcaaactt ccgtgaaggt ctgaccgtat tgcaatactt tattgcgacc
    10261 cacggtgcgc gtaagggttt ggcggatacc gcattgaaaa ccgcgaactc cggttacctg
    10321 acccgtcgtc tggtagacgt aactcaagat ttggtcgttg ttgaagacga ttgcggtact
    10381 tcagacggct ttgtcatgaa ggcagtggta caaggcggtg atgtgattga agcattgcgc
    10441 gagcgtattt tgggccgtgt tactgcgtct gacgttgtcg atccgtcaag cggcgagacc
    10501 ttggttgaag caggcacgtt gttgactgaa aaactggtgg atatgattga ccaatccggt
    10561 gtcgatgaag tcaaagtccg tactccgatt acttgtaaaa cccgccacgg tttgtgcgcg
    10621 cactgttacg gccgcgactt ggcgcgcggc aaactggtca atgccggaga ggcagtcggc
    10681 gtgattgccg cccaatcaat cggcgaaccg ggtacccagc tgactatgcg tacgttccac
    10741 atcggtggtg cggcatcccg tgcggcagca gccagccaag tggaagccaa atccaacggt
    10801 acggcacgat tcagcagcca aatgcgttat gttgccaaca ataaaggcga gttggttgtc
    10861 atcggccgtt cttgtgaagt cgtgattcac gatgacatcg gccgtgaacg cgaacgccac
    10921 aaagtacctt acggtgccat cctgctggta caagacggta tggccattaa agccggtcaa
    10981 accttggcaa cctgggatcc gcatacccgt ccgatgatta ccgaacacgc aggtatggtg
    11041 aaattcgaaa acgtggaaga gggcgttacc gttgccaaac aaaccgatga tgtaaccggt
    11101 ttgtccactt tggtagtgat cgacggtaaa cgtcgttcct ctagtgcttc caaactgctg
    11161 cgtccgactg tgaaactctt ggacgaaaac ggcgtggaaa tctgtattcc cggtacttct
    11221 actccggtat ccatggcatt ccccgttggt gcggtgatta ccgtacgcga aggtcaggaa
    11281 atcggtaaag gcgacgtatt ggcgcgtatc ccgcaagcct cttccaaaac ccgcgacatt
    11341 accggtggtc tgccgcgcgt tgccgaattg tttgaagcac gcgtgccgaa agatgccggt
    11401 atgttggcgg aaattaccgg taccgtttcc ttcggcaaag agaccaaagg caagcaacgt
    11461 ctgattatta ccgacgtgga cggcgtagca tacgagactt tgatttccaa agagaaacag
    11521 attttggtac acgacggtca agtggtaaac cgcggcgaaa ccattgtgga cggcgcggtc
    11581 gatccgcacg atattctgcg tctgcaaggt atcgaagcac tggcacgcta cattgtccaa
    11641 gaggtgcaag aggtttaccg tctgcaaggt gtgaagattt ccgacaaaca catcgaagtc
    11701 atcatccgtc aaatgttgcg ccgtgtgaac attgcggatg ccggcgaaac cggcttcatt
    11761 accggcgagc aggtcgaacg cggcgatgtg atggctgcca atgaaaaagc tttggaagaa
    11821 ggcaaagaac cggcacgtta cgaaaacgta ttgctgggta ttaccaaagc ctccctgtct
    11881 accgacagct tcatttctgc cgcatcgttc caagaaacga cccgcgttct gaccgaagcc
    11941 gcgattatgg gcaaacaaga cgagctgcgc ggtctgaaag agaacgtgat tgtcggtcgt
    12001 ttgattcctg ctggtactgg tttgacttac caccgcagcc gtcatcaaca atggcaagag
    12061 gtggagcagg agactgctga aacccaagta acggatgaat aatctttggt gcgtttattc
    12121 aatacaaaac cgcaagcttt aggcttgtgg tttttctttc agacggcatt taaattatta
    12181 gtgatttcct ttccggtaat agttgtttat gagcataagg gacctaaatg tttatctgaa
    12241 aaaagaaaaa tgatgaatct tcctgatctc acgcttgact gtctgcttgc aataaaaata
    12301 taattccact cttgccgaca tggtgtcggc aagtatttaa ctcaacagga cgagaaaata
    12361 tgccaactat caaccaattg gtacgcaaag gccgtcaaaa gcccgtgtac gtaaacaaag
    12421 tgcccgcact ggaagcctgc ccgcaaaaac gcggcgtgtg cacccgtgta tacacgacta
    12481 cccctaaaaa acctaactct gcattgcgta aagtatgtaa agtccgcctg accaacggtt
    12541 ttgaagtcat ttcatacatc ggcggcgaag gccacaacct gcaagagcac agtgtcgtat
    12601 tgattcgcgg cggtcgtgta aaagacttgc caggtgtgcg ttaccacact gtacgcggtt
    12661 ctttggatac tgcaggcgtt aaagaccgta aacaagcccg ttccaaatac ggtgctaagc
    12721 gtcctaaata attactggga cttaaatagg cacgtcggcc gcctaagctg aacaacggcc
    12781 gagtaagtga atactcaatt gggtattcat gggaatagac ccgactgaat agattaaagg
    12841 aaattaaaat gccaagacgt agagaagtcc ccaagcgcga cgtactgcca gatcctaaat
    12901 tcggcagcgt cgagttgacc aaattcatga acgtattgat gattgacggt aaaaaatccg
    12961 ttgccgagcg tatcgtttac ggtgcgttgg aacagattga gaaaaaaacc ggcaaagtag
    13021 caatcgaagt atttaacgaa gccattgcaa acgccaagcc tatcgtggaa gtgaaaagcc
    13081 gccgtgtagg tggtgcaaac taccaagttc ctgttgaagt tcgtccttca cgccgtttgg
    13141 ctttggcaat gcgctgggtt cgcgatgcgg cccgcaaacg tggtgagaaa tccatggacc
    13201 tgcgtttggc aggcgaattg attgatgcgt ccgaaggtcg tggcggtgcg ttgaaaaaac
    13261 gtgaagaagt acaccgtatg gctgaagcca acaaagcatt ctctcacttc cgtttctaat
    13321 tttgaaaggc taataaaatg gctcgtaaga ccccgatcag cctgtaccgt aacatcggta
    13381 tttccgccca tatcgatgcg ggtaaaacca cgacgacaga acgtattttg ttctatactg
    13441 gtttgaccca caagctgggc gaagtgcatg acggtgcggc tactaccgac tacatggaac
    13501 aagagcaaga gcgcggtatt accattacct ccgctgccgt tacttcctac tggtccggta
    13561 tggcgaaaca attccccgag caccgcttca acatcatcga caccccggga cacgttgact
    13621 ttaccgtaga ggtagagcgt tctatgcgtg tattggacgg cgcggtaatg gtttactgcg
    13681 cggtgggcgg tgttcaaccc caatctgaaa ccgtatggcg gcaagccaac aaataccaag
    13741 tgccgcgctt ggcgtttgtc aataaaatgg accgtcaggg tgccaacttc ttccgcgttg
    13801 tcgagcaaat gaaaacccgt ttgcgcgcaa accctgtacc tatcgtcatt ccggttggtg
    13861 cggaagacaa cttcagcggt gtggttgatt tgttgaaaat gaaatccatc atttggaatg
    13921 aagccgataa aggtacaacc tttacctatg gcgatattcc tgccgaattg gtcgaaactg
    13981 ccgaagaatg gcgtcaaaat atgattgaag ccgcagccga agccagcgaa gaactgatgg
    14041 acaaatactt aggcggcgac gagctgaccg aagaagaaat cgtaggcgcg ttgcgtcaac
    14101 gtactttggc aggcgaaatt cagcctatgc tgtgtggttc tgcatttaaa aacaaaggtg
    14161 ttcaacgtat gttggacgca gttgtagaat tgctgccagc tcctaccgat attcctccgg
    14221 ttcaaggtgt caacccgaat accgaggaag ccgacagccg tcaagccagc gatgaagaga
    14281 aattctctgc attggcgttc aaaatgttga acgacaaata cgtcggtcag ctgaccttta
    14341 tccgcgttta ctcaggcgta gtaaaatccg gcgataccgt attgaactcc gtaaaaggca
    14401 ctcgcgaacg tatcggtcgt ttggtacaaa tgactgccgc agaccgtact gaaatcgaag
    14461 aagtacgcgc cggcgacatc gcagccgcta ttggtctgaa agacgttact accggtgaaa
    14521 ccttgtgtgc ggaaagcgcg ccgattatct tggaacgtat ggaattcccc gagccggtaa
    14581 tccatattgc cgttgagccg aaaaccaaag ccgaccaaga gaaaatgggt atcgccctga
    14641 accgcttggc taaagaagac ccttctttcc gtgtccgtac agacgaagaa tccggtcaaa
    14701 ccattatttc cggtatgggt gagctgcact tggaaattat tgttgaccgt atgaaacgcg
    14761 aattcggtgt ggaagcaaat atcggtgcac ctcaagtggc ttaccgtgaa actatccgca
    14821 aagccgttaa agctgaatac aaacacgcga aacaatccgg tggtaaaggt caatatggtc
    14881 acgttgtgat tgaaatggaa cctatggaac cggggggcga aggttacgag tttatcgatg
    14941 aaattaaagg tggcgtgatt cctcgcgaat tcattccgtc tgtcgataaa ggtatccgcg
    15001 atacattgcc taacggtatc gttgccggct atcctgtagt tgatgtacgt atccgtctgg
    15061 tattcggttc ttaccatgat gtcgactctt cccaattggc atttgaattg gccgcttctc
    15121 aagcgtttaa agaaggtatg cgtcaagcat ctcctgccct gcttgagccg attatggcag
    15181 ttgaagtgga aactccggaa gaatacatgg gcgacgtaat gggcgacttg aaccgccgtc
    15241 gcggtgttgt attgggtatg gatgatgacg gtatcggcgg taaaaaagtc cgtgccgaag
    15301 tacctctggc agaaatgttc ggttattcga ccgacctgcg ttctgcaacc caaggccgcg
    15361 ctacttactc tatggagttc aagaaatatt ctgaagctcc tgcccacata gctgctgctg
    15421 taactgaagc ccgtaaaggc taatcaggca aataggtcgt ctgaaaggct gaaatgattt
    15481 ttcagacggc attgttcttt aatcgatctt taatgtaaag gaattagc
//
LOCUS       DAXHKG010000039        15224 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.039, whole genome shotgun sequence.
ACCESSION   DAXHKG010000039 DAXHKG010000000
VERSION     DAXHKG010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15224
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.039"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            380..1534
                     /gene="obgE"
                     /locus_tag="ACFMWP_000937"
     CDS             380..1534
                     /gene="obgE"
                     /locus_tag="ACFMWP_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HFC5891563.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTG
                     ENVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDSPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEQAAAKAEIAEQQPKTDTGVFKPE"
     gene            1617..2666
                     /locus_tag="ACFMWP_000938"
     CDS             1617..2666
                     /locus_tag="ACFMWP_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HFC5891564.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3354..4775
                     /gene="cysS"
                     /locus_tag="ACFMWP_000939"
     CDS             3354..4775
                     /gene="cysS"
                     /locus_tag="ACFMWP_000939"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HFC5891565.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFG
                     NTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPPADPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQL
                     AGCLKALGGIIGLLQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4858..5637
                     /locus_tag="ACFMWP_000940"
     CDS             4858..5637
                     /locus_tag="ACFMWP_000940"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC5891566.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            5624..5968
                     /locus_tag="ACFMWP_000941"
     CDS             5624..5968
                     /locus_tag="ACFMWP_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891567.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            5979..6509
                     /locus_tag="ACFMWP_000942"
     CDS             5979..6509
                     /locus_tag="ACFMWP_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC5891568.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6602..7717)
                     /gene="asd"
                     /locus_tag="ACFMWP_000943"
     CDS             complement(6602..7717)
                     /gene="asd"
                     /locus_tag="ACFMWP_000943"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HFC5891569.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGAETNKILGRSDNPTVIDGLCVRIGSMRCHS
                     QALTLKLKKDLPISEIEAILAGANDWVKVIPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            7893..8474
                     /locus_tag="ACFMWP_000944"
     CDS             7893..8474
                     /locus_tag="ACFMWP_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC5891570.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(8536..9390)
                     /gene="folD"
                     /locus_tag="ACFMWP_000945"
     CDS             complement(8536..9390)
                     /gene="folD"
                     /locus_tag="ACFMWP_000945"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HFC5891571.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQNNLHTPCLAVVLVGGD
                     PASAVYVRNKKTSCQKCGIKSLSYELPESTSQEELLALVDRLNVDSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            9613..9690
                     /locus_tag="ACFMWP_000946"
     tRNA            9613..9690
                     /locus_tag="ACFMWP_000946"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9648..9650,aa:Pro,seq:tgg)
     gene            9715..9791
                     /locus_tag="ACFMWP_000947"
     tRNA            9715..9791
                     /locus_tag="ACFMWP_000947"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9749..9751,aa:Arg,seq:tct)
     gene            9819..9894
                     /locus_tag="ACFMWP_000948"
     tRNA            9819..9894
                     /locus_tag="ACFMWP_000948"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9852..9854,aa:His,seq:gtg)
     gene            10030..10536
                     /locus_tag="ACFMWP_000949"
     CDS             10030..10536
                     /locus_tag="ACFMWP_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HFC5891572.1"
                     /translation="MVDAWSVPDFESKICPPEALSERLARLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKDGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            10533..12311
                     /locus_tag="ACFMWP_000950"
     CDS             10533..12311
                     /locus_tag="ACFMWP_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HFC5891573.1"
                     /translation="MTVLKLSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKVDGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            12424..13248
                     /locus_tag="ACFMWP_000951"
     CDS             12424..13248
                     /locus_tag="ACFMWP_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HFC5891574.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(14011..14799)
                     /locus_tag="ACFMWP_000952"
     CDS             complement(14011..14799)
                     /locus_tag="ACFMWP_000952"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HFC5891575.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSIQTAQPAMITVSLRR
                     AGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(15013..15207)
                     /gene="thiS"
                     /locus_tag="ACFMWP_000953"
     CDS             complement(15013..15207)
                     /gene="thiS"
                     /locus_tag="ACFMWP_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HFC5891576.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQQPFAVAVNTVFIPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         3626 a         3850 c         4245 g         3503 t
ORIGIN      
        1 gtccacagga caatggtggt cagaatgccg atgaaaccgg caacggtcag ccagtgcagc
       61 gcgcgtgtca acgggtcgta aacggcaggt tggtttgtgt tcataaaaaa cttatatatg
      121 taacggtttg aacggacatt ccgtcgggtc ggaatgtcaa aaaggcgcga ttgtaccaaa
      181 gaagttggac ataattttgt ttgcaggctg aagatttgct taaaaattca ttaagatggg
      241 cggaacaaat agtttgggta cggcgtgttg aaataccgct tatcccttat aatagcgtcc
      301 gaaattctgt tcagacggca tcaaaacaca cggtaatccg tctgaacccc catttgaaac
      361 caacaaacaa gagcattgaa tgaaattcat cgacgaagca aaaatcgaag tcgccgcagg
      421 caaaggcggt aatggcgcaa ccagtttccg ccgcgaaaaa ttcgtaccgc gcggcggtcc
      481 ggacggcggc gacggcggca aaggcggcag cgtttgggca gaagccgacg aaaacaccaa
      541 caccctcgtc gaataccgct tcgttaaacg ctaccaagcc aaaaacggcg aaaaaggcca
      601 cggttccgac cgttacggcg caggtgcgga cgacatcgtc ctcaaaatgc ccgtcggcac
      661 ccttatccgc gacctcgaca ccggcgaaaa cgttgccgac ctcacttatc acggacagcg
      721 cgtctgcctt gccaaaggcg gcaaaggcgg cttgggcaac atccacttca aatcctccgt
      781 caaccgcgcc ccaaaacaat ccacgcccgg cgaagaaggc gaagcccgtt ccctgcaact
      841 cgaactcaaa gtcctcgccg atgtcggctt attgggtatg cccaacgccg gcaaatccac
      901 cctgattacc gccgtatccg ccgcacgccc caaaatcgcc aactacccct tcaccaccct
      961 gcatccaaac ttaggcgtgg tacgcatcga cgaaaaccac agcttcgtga tggccgacat
     1021 ccccggcctg attgaaggcg cggcagaagg cgcgggtttg gggcatcgtt tcctcaaaca
     1081 cttatcgcgc accggattat tgctgcacgt cgtcgatttg gcgcccttcg acgaaaccgt
     1141 caacccggcc gaagaagcac ttgccatcat caacgaattg cgcaaatacg atgaagaact
     1201 ttacggcaaa ccgcgctggc tggtgctgaa taaactcgac atgcttgacg aagaagaagc
     1261 ccaaacgcgc actgccgcct tcctcgaagc cgtcggctgg gactccccca aacccgacga
     1321 ccgtttccaa tttgacatgg aaaccccgcg cctcttccaa atcagcgcgc tgacccacca
     1381 aggcacgcag gaattggtac accaaatcaa ccaatacctg accgagaaaa aacgtatcga
     1441 agccgaaaaa gcagaagcgg aacaggcagc ggcaaaagcc gaaattgccg agcagcagcc
     1501 gaaaacggat acgggcgtgt ttaagccgga gtgaaaaaag aaagggtttc agacgatatt
     1561 tgttctacaa aaggttgttt gaaacaattt taaagcaaga ttgaaatgga ttaaaaatgt
     1621 catctaacca atatatccag tcgcttgagt tgacaaactt taccgttctt ccaaacgata
     1681 cttttgaatt ttctgaaaat ctcaatgtta ttgttgccga aaacggttgt ggcaaaacac
     1741 atttgttaaa aattttatac agcctgctag aagtaacatc taacaccaaa aacagattac
     1801 tgaaaacaga attgcaaaaa agttttgccg ataaattact gaatgttttc cgtcccgatt
     1861 ccttgggcag gttgagcaaa cgtttgcagg ggcgcgggcg tacggaaatc gttttaaaac
     1921 tgcaaaacgg cactacgcat agtagtctga atttttccag taactcatca tcgcaagtca
     1981 atgttcaaag catcggattg aaagaaaatg aatatactcc gacacctatc ttcttaccca
     2041 gccgcgaatt aattacactt tgcccttggt tcacttcttt gtatcaaaac caaagcatcc
     2101 ctttcgaaga aacttggttt gatgcctgta tgcaattaaa tcacccgctt gccaaaggcc
     2161 ccagagaaac aaaaattcga gaattgctcg aacctattga gaacgcgatg ggcggaaaag
     2221 tatctgaaga acaaggaagg ttttatctat cgctgacaaa tacgggcggt aagattgaag
     2281 cacctttggt agcagagggt ttgcggaaat ttgtcatgat tgcccggtta atcgcaacag
     2341 gggcattgct ggataaaggc tatctatttt gggatgaacc ggaagctaat ctgaatccta
     2401 aattgatcaa agtggctgcc cgtattattt ggtctttatc tcaacagggt attcaggttt
     2461 ttattgcaac acactcttta ttcttattga gagaattgga acttttgaag cttgaaaata
     2521 acacggattt acctgtacgt tttttctcgt tgattgcttc cgatgatgga acaaaagtgg
     2581 agcaagggaa cagtattaat gatttgaaca cattgatatt gttagatgaa aacattatgc
     2641 aggcagacag gtatctgaat atttgaggtt aagctatgac tacaatcaca gaaaagagat
     2701 taacctttgc ttttcctgaa gattattacg ttaccaagta tgacgaatgg gaacattata
     2761 aaatttttca gaacagttgt aatttacgta ataaaattga tacaaatgaa aagggaaaga
     2821 acgggataaa tcaaagtgta gatgacgata atggcagctc aggtgtagat ataatagccc
     2881 ttcatgaatc gacactttgg ctaatcgaaa ttaaagatta ttaccgactt gggcttgagc
     2941 caaatgccca atcaatagat gaaaaacttt ctgacctacc atatttaatc gcaagaaaaa
     3001 ttcgagattc attggcagga ttggtttctg ctaaatttaa agcagaaaaa caggaagaaa
     3061 aagatttttc tcgcttggct ttagattgta acgaaataaa aatagtcctt catattgaaa
     3121 tgcctagtat aagaagtaaa ctttatccct cgtcatcaga tttagcaaac ttattaaaag
     3181 ataagtttaa attatcagaa tttacaaaaa attttgcaaa ctgttatgca gaaccaattt
     3241 tcacaaatat cagccatatt aataatccgc aactacgtaa tgttccttgg tccgtatcta
     3301 caggaacaga acagaaatta tcatccgagc aacaaagatt aatccatagt cccatgacca
     3361 ccatctacaa cacccttacc cgccaaaaag aaccctttgc ccccatcgac cctgaaaacg
     3421 tgcgtatgta cgtttgcggc atgactgttt acgactattg ccacttaggc catgcccgtg
     3481 tgatggtggt gtttgacatg attgcccgtt ggttgcgcga gtgcggctat ccgctcactt
     3541 atgtacgcaa catcaccgac atcgacgaca aaatcattgc ccgtgcggct gaaaacggcg
     3601 agaccatcgg cgagctgact gcgcgtttca ttcaggctat gcacgaagat gccgatgctt
     3661 tgggcgtgtt gcgtcccgat atcgagccga aggcgacgga aaacattccg caaatgattg
     3721 cgatgattga aaccctgatt caaaacggca aggcttatcc tgccgccaac ggcgacgttt
     3781 actacgccgt gcgcgagttt gccgcttacg gccaattatc gggcaaatcg ttagacgacc
     3841 tgcgtgcagg tgagcgtgtg gaagtggacg gtttcaaacg cgatccgctt gattttgtgt
     3901 tgtggaaagc ggcgaaagca ggcgaaccgg cgtgggaaag cccttggggc aggggacggc
     3961 cgggctggca cattgaatgc tccgccatga gtgaaaacct gttcggcaat accttcgaca
     4021 tccacggcgg cggcgcggat ttgcagtttc cgcaccacga aaacgaaatt gcccaaagcg
     4081 tcggcgcgac ggggcatacc tgcggtcatc atcacgcgca aacccaccac gggcaaagca
     4141 tcgccagcca cgtcaaatat tggctgcaca acggctttat ccgcgtggac ggcgaaaaaa
     4201 tgtccaaatc actgggcaac ttcttcacca tccgcgaagt gttgaaacaa tacgaccccg
     4261 aagtcgtgcg cttcttcatc ctgcgcgccc actaccgcag cccgttgaac tattccgacg
     4321 cgcatttgga cgacgcaaaa ggcgcgttga cgcgtttgta tacgactttg aaaaatacgc
     4381 cgcccgccga tccgatgccg tctgaagccg gcgatgacta cacgcgccgc ttttatgttg
     4441 cgatgaatga tgattttgat acggtgaaag cggtggcggt gttgttcgaa cttgccggcg
     4501 aagtgaacaa aaccaataac gcgcaactgg caggctgcct gaaagccttg ggcggcatca
     4561 tcggactgct gcaacgcgac ccgaccgagt tcctgcaagg cggcgcggct tcagacggcc
     4621 tctccaacga agaaatcgaa gacttgattg cccggcggaa acaggcgcgc tccgataaaa
     4681 actgggcgga atccgaccgc attcgcgacc ttctgaacga acacaaaatc attttggaag
     4741 acaacgccgg cggcacgact tggcggcgcg gttgaaatcc atcgaaaagg gtaaatgtgc
     4801 cgcattttgc ccttttttgt tcagacggca tttttattgt gagaacttat ttttattatg
     4861 cttaaaatca tttccgccaa cgtcaacggc atccgctccg cctacaaaaa aggtttttac
     4921 gaatatatcg ccgcatcggg cgcggacatt gtctgcgtgc aggaactcaa agcgcaggag
     4981 gctgatttgt ctgccgatat gaaaaatccg cacgggatgc acggccattg gcattgcgcc
     5041 gagaagcgcg gttacagcgg cgtggcggtg tacagcaaac gcaaacccga caatgtgcaa
     5101 atcggtatgg gcattgaaga attcgacagg gaagggcggt ttgtgcgttg cgatttcgac
     5161 aggttgagcg ttatttcgct ttacttgccc agcggcagca gcgcggaaga acgccagcag
     5221 gtgaaatacc gtttccttga tgcgttttac cctatgctcg aagcgatgaa aaacgaagga
     5281 cgcgacattg tcgtttgcgg cgactggaac atcgcccacc aaaacatcga cctgaaaaac
     5341 tggaaaggca atcagaaaaa ttcgggcttc ctaccggaag aacgcgagtg gataggcaag
     5401 gttatccaca agctcggttg gacggatatg tggcgcacgc tttatcccga tgtgccgggc
     5461 tacacgtggt ggagcaaccg cgggcaggcg tatgcgaaag atgtcgggtg gcgcatcgat
     5521 tatcagatgg ttacgcccga acttgccgcc aaagccgtgt ccgcacacgt ttataaagat
     5581 gaaaaatttt ccgaccatgc gccgctggtc atggagtatg actatgctgc cgaataaagt
     5641 tttgggtaaa tatgattgga atgtggacgg aaaaacagga ataggcgcag catgggttgt
     5701 cgctgcgttt atcctgccca tattggtgtg ggcgatattt atgttgtcgc ggatgcaagg
     5761 ctggcttgcg ccgaccaagg caaacccgac atgggcgttg gtgtggctgc tgatctgcat
     5821 gccctgcctg ctgattgcgt ccaaatgttt gggttggaaa ggctggcggc gggtggtgaa
     5881 tatttttgcc tgcctgaccg tctgcgccat attgagcgta cccgcttcgc tgctcatcgc
     5941 ctttaccctc cgggacctgc tgaaataggc ggggcggtat gcagggtttt gaactcgaag
     6001 atttgacgct ttggctgata cgcgatgccg gagaggatca gatgtggata gaccgttggg
     6061 cgatcagtta tcccgtcgtg cagatgtccg aagcgtcggc cggtcaaagc ataggggaat
     6121 ggcaggcagg gcttcggacg gcatttgaac gcatacgtgg caaatacgtc gccgttgtcg
     6181 cacacggtgc gggcgcggcc gcatttttgg cgtggctgta tcaggcagac atcctgacac
     6241 ggaagaaaat tgccaacatc atccttgtac cgcagcgtcc cgatattttt cccgacgatg
     6301 cggaacacac tttccaacgc gtccgctgtc cctgccgtgc cgcattggtt gtacccgaac
     6361 acggcggcgt gccgcacggt tgggcgcaaa aacaggcgga tttgtggaac gcccgcctgt
     6421 tggtttcccc gcattcgggc agtttgaacg gcatgctcgg cggctggcag tggggtatga
     6481 agctgatgca ggaaatgttg ctggcgtgaa cgcttgcctt atcggaattt cggttaactg
     6541 gggttgcaag gaaaatgccg tctgaaacag gcttcagacg gcatttccat tcaaacaggg
     6601 cttacaggct gcccaacacg atacgcaata cgcggcgcag cggctcggcc gcgccccaca
     6661 agagctggtc gccgacggtg aacgcgctga tgtattcgcc gcccataccc agtttgcgga
     6721 tgcgtccgac ggggacggac agcgtgccgg taactttggc gggggtcagc tcgcggatgc
     6781 tggcttcttt ttcgttgggg atgactttca cccagtcgtt cgcgcctgcc aaaatcgctt
     6841 cgatttcgga aatgggcagg tcttttttca acttcagggt aagggcttgg ctgtggcagc
     6901 gcatagagcc gatgcggacg cacaggccgt caatcacggt tggattgtcg ctgcggccga
     6961 ggattttgtt ggtttccgcg ccgcctttcc attcttcttt ggactggccg ttgcccaaat
     7021 ccacgtcaat ccacggaatc aggctgccgg cgagcggtac gccgaagttg gctttcggat
     7081 agtcttcgct gcgcaggaaa tcagatactt tgcggtcgat gtcgagaatc gagccggcag
     7141 gatcggcaag ttcgtccgcc acttgggcgt gaaccgcgcc cataccgctg atgagttcgc
     7201 gcatgttttt cgcgcctgcg ccggaagcgg cttggtaggt catgctggtt gcccattcga
     7261 ccaaatcgtt ttggaacagg ccgcccaaag ccatcagcat cagggaaacg gtacagttgc
     7321 cgccgatgta gtttttcacg ccgtttttga ggccgttgtc gatgacgttg cggttgacgg
     7381 ggtcgaggac gataatcgcg tcgtctttca tacgcagcga ggatgccgcg tcaatccagt
     7441 agccgttcca gccgctgtcg cgcagggctt ggaagacgga tttggtgtag tcgccgcctt
     7501 ggcaggtaac gatgatgtcc atttttgcca gctcggcaac gttgttcgcg tccaataatg
     7561 ttttagccgc ctgaccgaaa tcaggggctg cgccgccgac gttggaagtg gtaaagaaaa
     7621 acgcttcggg aatgtgggcg aagtcgtttt cttctttcat acgctgcatc aaaaccgaac
     7681 cgaccatacc gcgccagccg acgaaaccta ctttcattgt gttgctcctt gaggaaaaat
     7741 cgttaataaa attatgtatg gcgtaaagga agcgttttaa cgccgtattg ggaaaatgta
     7801 aagttcttta tcgggatttc tttaagtatt ggcgttttcg gtgtcgtggc ggtagaatcg
     7861 gggtcagtta agaacaatta tcaggaacgg atatggaaga aaaaaacgac tacaccgacg
     7921 cggcatccga caaccgcaac gggcaggaaa ttgaagtcgg aattgccggc gcaggcgacc
     7981 ggatacttgc cgcgctgctg aaccaattgt ttaccttttt ggttttgttg gtgccgtttg
     8041 ccggactgat tgctttcgcc atcaagaatg aaggcaggat tggcggcagt gaggaaatat
     8101 tcgggctgct tttgggcatg acttcctttt gggtaggact ggcgggcatt ttggtttata
     8161 ccgtcgttca aatctactat atgagtcggg acgggcagtc attgggtaag aaaatcatga
     8221 gaatcagggt gttgaaaacc gacggccgca atcccggttt tgtcggcacg gttttggtac
     8281 gcgaaatcgc atggtcggtt ttggttgcca ttattgccgc cgttatcggt cttgcagtag
     8341 gtgacaacgg agaaaacgcc atcaacctgc tggcattcct tgccaacttt gtcctgctct
     8401 ttatggtcaa acgcgatcgc cgcacgcttt acgacatact ggcggatacg gttgtcgtca
     8461 agctgcccaa ataaacggac acggcaaaat gccgtctgaa agcctttcag acggcatttt
     8521 tatcttcaga accgctcaag catcgtgcag tgaagccgcg tgcagggtgt tttccatcaa
     8581 tgtggcaatc gtcatcggac ccacgccgcc gggaacgggc gtaatcatcg ccgcccgttc
     8641 ttttgccgtt tcaaattcca cgtcgccgca caggctgccg tcgtccagac ggttgatgcc
     8701 cacatcaata acgaccgcgc cgggtttgat ccattcgcct ttgacaaagt tcggaatgcc
     8761 tacgccgacc accaaaatat cggccccggc aacctcgtct gccagatttt cggtcgcact
     8821 gtggcagacc gttaccgttg cgcgcgccag cagcaattcc aaagcctgcg ggcggccgac
     8881 aatattcgac gcgccgacca cgaccgcttt tttccccttc ggatcgatgc cgtaagcctc
     8941 caaaagcgtc atcacgccct tgggcgtaca cgggcgcatt agcggcattt tgactgcaag
     9001 cctgcccaca ttgtaaggat ggaagccgtc cacgtcctta tccggcgaaa tacgttccaa
     9061 aaccgcctgg ctgtcgaggt gcttcggcag tggcagctga accagaatac cgtccacttc
     9121 ggaatcgaca ttcaggcggt cgaccagtgc cagcagttct tcctgcgatg ttgattcggg
     9181 cagctcgtaa gacagtgatt tgatgccgca tttttggcag gaggttttct tgttgcggac
     9241 ataaaccgcg ctggcagggt cgcctccgac caaaaccacg gccaggcaag gcgtgtgcag
     9301 attgttctgt tggcgttgcg ccaccgcttc ggcaaccgcc tgcaggcgtt tttgcgaaac
     9361 ttctttacca ttgatcagtt gtgccgacat atccgtcctt ttgttaaaca ggtagaaaat
     9421 gctgaaaatt atcgcatttt ccgtttgttt ttacagcagg atgccgaaaa taaatttgcc
     9481 ctgaaataaa atacggctgt ttggacggat taaatatttt ttcaaatcaa aaaactatat
     9541 ttttcatctt ggtgtcttga aaataaatgt tgacgcatct ttccctgagt tgtatagttc
     9601 gcttcttcaa gtcggggcgt agcgcagccc ggttagcgca tctgctttgg gagcagaggg
     9661 tcgtgagttc gaatcccacc gccccgacca atcaatcagc acgaatcggc atgagcgccc
     9721 gtagctcaac cggatagagc accgaccttc taagtcgggg gttacaggtt cgattcctgt
     9781 cgggcgtgcc aagaatttga ttgaaaaccg tttttatggt ggctgtagct cagttggtag
     9841 agccccggat tgtgattccg gttgtcgtgg gttcgagccc catcagccac cccagataaa
     9901 ggcccgtact tttcggtacg ggtcttttcc cgtttgcgcg tactgtccgc gccgccggct
     9961 ttgcctttcg catatgcttc tgtatcatgt gggtttttct gtcttttatg gtttttgtcg
    10021 gaggctttga tggttgacgc ttggtctgtc cctgattttg aatcgaaaat ctgtccgccc
    10081 gaggcattgt ccgaacggtt ggctcggttg ccgcgcccgc tggtgtttac caacggctgt
    10141 ttcgacatcc tccacagggg gcacgttact tatctggcgc aggcgcgttc ggcaggggcg
    10201 gcgttggtgc tggcgttgaa taccgatgct tcggtgcggc gtttgggcaa ggacggcgac
    10261 cgcccgatta atcctttgga gaaccgtgcc gccgttgccg ccgctttgga aagtgtggat
    10321 ttggtaacgt ggtttgacgg ggatacgccg gcggcgttga ttgaggcggt caaacctgag
    10381 attttggtca agggcggcga ttgggctgcg gataagattg tcggtgcggc agaaacgttg
    10441 gcgcgcggcg gtcaggtgtt ttcaattccg tttctgcacc agacttcgac aacgaagact
    10501 ttggcaaaaa tccgtgcggc agagggcgga aaatgacggt tttgaagctt tcgcactggc
    10561 gggtgttggc ggagcttgcc gacggtttgc cgcaacacgt ctcgcaactg gcgcgtatgg
    10621 cggatatgaa gccgcagcag ctcaacggtt tttggcagca gatgccggcg cacatacgcg
    10681 ggctgttgcg ccaacacgac ggctattggc ggctggtgcg cccattggcg gttttcgatg
    10741 ccgaaggttt gcgcgagctg ggggaaaggt cgggttttca gacggcattg aagcacgagt
    10801 gcgcgtccag caacgacgag atactggaat tggcgcggat tgcgccggac aaggcgcaca
    10861 aaaccatatg tgtgacccac ctgcaaagta agggcagggg gcggcagggg cggaagtggt
    10921 cgcaccgttt gggcgagtgt ctgatgttca gttttggctg ggtgtttgac cggccgcagt
    10981 atgagttggg ttcgctgtcg cctgttgcgg cagtggcgtg tcggcgcgcc ttgtcgcgtt
    11041 taggtttgga tgtgcagatt aagtggccca atgatttggt tgtcggacgc gacaaattgg
    11101 gcggcattct gattgaaacg gtcaggacgg gcggcaaaac ggttgccgtg gtcggtatcg
    11161 gcatcaattt tgtcctgccc aaggaagtag aaaatgccgc ttccgtgcaa tcgctgtttc
    11221 agacggcatc gcggcggggc aatgccgatg ccgccgtgtt gctggaaacg ctgttggcgg
    11281 aacttgatgc ggtgttgttg caatatgcgc gggacggatt tgcgcctttt gtggcggaat
    11341 atcaggctgc caaccgcgac cacggcaagg cggtattgct gttgcgcgac ggcgaaaccg
    11401 tgttcgaagg cacggttaaa ggcgtggacg gacaaggcgt tctgcacttg gaaacggcag
    11461 agggcaaaca gacggtcgtc agcggcgaaa tcagcctgcg gtccgacgac aggccggttt
    11521 ccgtgccgaa gcggcgggat tcggaacgtt ttctgctgtt ggacggcggc aacagccggc
    11581 tcaagtgggc gtgggtggaa aacggcacgt tcgcaaccgt cggtagcgcg ccgtaccgcg
    11641 atttgtcgcc tttgggcgcg gagtgggcgg aaaaggtgga tggaaatgtc cgcatcgtcg
    11701 gttgcgccgt gtgcggagaa ttcaaaaagg cacaagtgca ggaacagctc gcccgaaaaa
    11761 tcgagtggct gccgtcttcc gcacaggctt tgggcatacg caaccactac cgccaccccg
    11821 aagaacacgg ttccgaccgc tggttcaacg ccttgggcag ccgccgcttc agccgcaacg
    11881 cctgcgtcgt cgtcagttgc ggcacggcgg taacggttga cgcgctcacc gatgacggac
    11941 attatctcgg gggaaccatc atgcccggtt tccacctgat gaaagaatcg ctcgccgtcc
    12001 gaaccgccaa cctcaaccgg cacgccggta agcgttatcc tttcccgacc acaacgggca
    12061 atgccgtcgc cagcggcatg atggatgcgg tttgcggctc ggttatgatg atgcacgggc
    12121 gtttgaaaga aaaaaccggg gcgggcaagc ctgtcgatgt catcattacc ggcggcggcg
    12181 cggcaaaagt tgccgaagcc ctgccgcctg catttttggc ggaaaatacc gtgcgcgtgg
    12241 cggacaacct cgtcattcac gggctgctga acctgattgc cgccgaaggc ggggaatcgg
    12301 aacatactta aaaaatacac cctttttcaa cacggggcgg tatccgtccg aatccgtccg
    12361 gattctgccg cccgacagac tgccgcccag gcgggcgggg tttcaaacat tgaggaaatt
    12421 ctaatgaaat ggctcttcac ccttttggcg gtactcaata ttgccgtatt cggcggcacg
    12481 gtgggctata aattggccgt taaagcgacg ggcggcgtgc cggaaaaccg ggccgtcgaa
    12541 aacacgcccc ccgcaacgcc cgccgccgac aatgcggcgg catccgtgga ggatacggcg
    12601 gcactgctca aaccgggcga catcctgacc gaagagcagg ccgagcagtt gcgcttgaaa
    12661 aaggaagcgg aacagaaaaa actgagggag aaaaaacagc gcgaggaaaa agcccgccgc
    12721 gaaaaactcg ccgccgaaaa ggcgcaggcg gaacgcgaaa acggcgcggc ggatgcctta
    12781 tgcgccgcgc aggcaagcct cacgatggac gaagacgact accaccgcat caaagggctt
    12841 ttgggcaaat ggtcgcacgt tgccagcagg agcgtcgaaa aacgcaccgc caaagccaaa
    12901 cctgccgaca aaacctaccg cgtcgtcctg cccgtttccg ccgatgccga aaatcaggcg
    12961 gcggagctgt ctgccaaagg tttcaacccc ataccgtttg acggcgcatt gagtttgggt
    13021 gtcggcaaca gccgggaaaa cgcccaagcc ctgcaaaacc ggcttgccgg cgccggattc
    13081 ggcggggcgc atattgtcga acactttgcc gaagccgaca ggcaggacga ttctttgagc
    13141 gtgtcgcgta tgacggtttt gtttaccggc gtgaatgccg ccgatgcgga cgaaattcgt
    13201 aaaatcacgt ccctatacgg caaactgaac ctcaagtctt gcaaataggc gcgaaagccg
    13261 gacgataaac gccaaaccca ccgcgaaggt gggtttggcg tttcggtttt gagtatctga
    13321 tatataaaaa gggaatgtat gtctcgtata tgccgactcc aagtgtgaaa gtgaattgtg
    13381 agggaataca gtgtttaatg gttcggaatg gacgacttcc gagtggtttt gattatacgc
    13441 taataataat aattatcaat aaaaatttaa aaataaatgc ggattttttg taatacgatg
    13501 aaaaataaac aaattaacct gtccgccgat gtttgtgatt cgggtcggca aactttcatt
    13561 gtgtcggaca aatcggggtc ggcagtcata gctgagggct tcgtgcctga cggaaataag
    13621 cctgccgtgt ttgaacatcc gtccgatttg gcgcggacag ggttgtcatt cgggggtgtt
    13681 tgagcgtgga ttcggggatg caaaagcggt aaaaccgttg cggatgaagg cttacggacg
    13741 gctttaggta tttttaagtg tattcaaaca acaacaaaac gcttcttcta ttgccgtatt
    13801 tagggcttgc gcggcagcct gcacaccgtg gaggccgagt gtttcgttgg ttgcggcatc
    13861 gggacgggcg gcaaggtttt ccggccggtt tttccatttt ttccgacaga gccgtgatgc
    13921 ttgggaatgg cggtttgccc gtttcagacc gccgccgttt tgggctgcga tgccgtctga
    13981 accgttcaga cggcattttt gccgcctttt tcaatattcc gccgaatgcc aaaacggttg
    14041 tccgactgtc ggcgtgctgg cttgcgcttt gtcgcgtgct tcgaccggtc cggcttcaaa
    14101 tgccagccgt ccggattcga cggcgagtgc gaaggcgcgt gccatattga ccggatcgcc
    14161 gctgcgggaa acggcagtat tcaaaagcac gccgtcaaag ccccattcca tcacttgtgc
    14221 cgcctgtgag ggcaaaccca agcccgcgtc gataatcagc ggcgtgtcgg gcaggcgttc
    14281 gcgcaggacg ttcaacgcgt aggcgtgaac cgcgcccaaa cccgtgccga tcggggccgc
    14341 ccacggcatc aacgcctgac agcccgcgtc gagcaggcgg cggcaggcaa tcaggtcttc
    14401 ggtgcaataa ggcagcactt tgaagccgtc tttaatcagg atttccgccg cttcgacaag
    14461 ctggaacaca tccggctgca aggtgtcgtc atctccgatg agttccaatt ttatccaatc
    14521 ggtttcaaac acttcgcgcg ccatttgcgc cgtcgttacc gcttcctgca cgctttggca
    14581 gcctgccgtg ttcggcagga cgggaacgcc ggtttcttga agcagcgacc aaaacccctg
    14641 accgtgcgcc tcgccgccgc ttcccgcgcg gcgcagcgag acggtaatca tcgcaggctg
    14701 ggcggtttgg atggattgtt tgaggatttc gggggtcggg taggcagccg tgccgagcag
    14761 cagccgtgaa gggaaagttt ctccgtatag ggtgagcata atgggttcct ttgtatagtg
    14821 gattaacaaa aaccagtacg gcgttgcctc gccttagctc aaagaaaacg attctctaag
    14881 gtgctgaagc accaagtgaa tcggttccgt actatccgta ctgtctgcgg cttcgtcgcc
    14941 ttgtcctgat ttaaagttaa tccaccataa cgttgttttg gggacagggg tcgtctgaaa
    15001 aggcaaaacc gcctagccgc cgacgacggg gcggacgata tcgattttgt cgttttcgtt
    15061 caaaaccgtt tccgcatacg cgcctttggg gatgaaaacg gtgttgaccg ccacggcaaa
    15121 gggctgttgc ggcgcggttt gggcgatgag gtcggcaacg cttgtgccgt gaagttcggc
    15181 gggtccgccg tttaagatga tgttcatggt ttctcgatgt ttct
//
LOCUS       DAXHKG010000040        14914 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.040, whole genome shotgun sequence.
ACCESSION   DAXHKG010000040 DAXHKG010000000
VERSION     DAXHKG010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14914
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.040"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACFMWP_000954"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACFMWP_000954"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC5891577.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGAAASPKAEAPVAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKNGVVSRLTGGLAGMAK
                     GRKVDVIQGDGQFLDSHHLEVSLTAGDAYELAAPTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1968..3569)
                     /gene="aceF"
                     /locus_tag="ACFMWP_000955"
     CDS             complement(1968..3569)
                     /gene="aceF"
                     /locus_tag="ACFMWP_000955"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HFC5891578.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAEAQPAPAAAPVA
                     AGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVV
                     KAVFLKVGDKVSEGSAIIEVETAGSAAAAPAPAAQAAAPAPAAAPVPAAAAAPAPSAP
                     AAAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIMGDDIKAFVKSVMQGG
                     AAKPAAASASLGGGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVT
                     VHEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLV
                     LKNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGAC
                     FTISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRV
                     IDGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3719..6382)
                     /gene="aceE"
                     /locus_tag="ACFMWP_000956"
     CDS             complement(3719..6382)
                     /gene="aceE"
                     /locus_tag="ACFMWP_000956"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HFC5891579.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALSA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7076..8788
                     /locus_tag="ACFMWP_000957"
     CDS             7076..8788
                     /locus_tag="ACFMWP_000957"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HFC5891580.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERTAAQAELTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVESENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASSAAIVEQFGANGG
                     SLGPVGFKGKVYADFATEKGADWVIGANEDGYHYTSFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     LLNG"
     gene            8851..9507
                     /locus_tag="ACFMWP_000958"
     CDS             8851..9507
                     /locus_tag="ACFMWP_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HFC5891581.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9517..9972)
                     /gene="ruvX"
                     /locus_tag="ACFMWP_000959"
     CDS             complement(9517..9972)
                     /gene="ruvX"
                     /locus_tag="ACFMWP_000959"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HFC5891582.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9965..10513)
                     /locus_tag="ACFMWP_000960"
     CDS             complement(9965..10513)
                     /locus_tag="ACFMWP_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HFC5891583.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10515..11075)
                     /locus_tag="ACFMWP_000961"
     CDS             complement(10515..11075)
                     /locus_tag="ACFMWP_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HFC5891584.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11403..13208
                     /locus_tag="ACFMWP_000962"
     CDS             11403..13208
                     /locus_tag="ACFMWP_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC5891585.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSVRKGHEGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13335..14819
                     /locus_tag="ACFMWP_000963"
     CDS             13335..14819
                     /locus_tag="ACFMWP_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HFC5891586.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAEQAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLNGAVGVSAAFLPPEAVVVSTKGRDG
                     KDRMVLKAVPEDYVYGMGGDPLAGIPAELKTVPMTVLINSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3551 a         3699 c         4194 g         3470 t
ORIGIN      
        1 ccggaagaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgcagc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacggcc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggatgctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcggcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gctgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttag gcgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttta ccaaatcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgagaccgat aataccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggtaacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagggg
     1141 ctgccagttc gtacgcgtcg ccggcagtca gcgatacctc caagtggtgc gaatctaaga
     1201 attggccgtc gccttggata acatccactt tacggccttt cgccatacct gccaaaccgc
     1261 cggtgaggcg ggaaaccacg ccgtttttgt aggcgcgcag catatcgatg tcgagttcag
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacag ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaggttt
     1441 tataacgttc gacgatggcg actttcaagc cttcatcggc agcagcaaat gcagcggagt
     1501 aaccgccggg accgccgccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagcg ggagcggcag ctttgggtgc ttcttgcgca ggggcagcaa
     1621 caggtgcttc ggctttagga gaggcagccg cgccttcggc ttcaacgact acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccaaggt aatcagggtg tcgtcaacgg
     1801 cgatggtatc gcccacattc acttcaaccg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaagctca tgtctcatct ttctgaatga tgttcaaact
     1921 tccttttcag acggcacagg ccgctatgcc gtctgaagcc gatcgggtta cagggtaatg
     1981 cggcggaagt ctttcaacag cttcgccaag aatacggtga agcgcatacc ggccgcaccg
     2041 tcgatgacac ggtggtcgaa ggacaggctc aacgggcaca tcaggcgcgg ggcaaactct
     2101 ttgccgttcc aaacaggttt gatttgggat ttgcacacgc ccaagatggc gacttcggga
     2161 gcgttcacaa ttggcgtgaa gcctgtgccg ccgatgccgc ctaagctgga aatggtaaag
     2221 cacgcgcctt gcatttcttg cggtttgagc ttgccttcac gggctttttt ggacaattcg
     2281 gtcaattctt ggctgatttg tttcaagcct ttttgatcca cgtctttgat gacgggaaca
     2341 accaagccgt tcggcgtatc ggctgcgaaa ccgatgttga agtagttttt cagcaccagg
     2401 ttgtcgccgt ccagtgaggc gttgaattcg gggaatgctt tcaacgcgga aacagaggct
     2461 ttgatgatga acgccaacgg ggacagtttc acgccttcgc gttcccattc tttgttcagc
     2521 tgtttgcgga attcttccag ctcggtcatg tccgcttctt cgtgtacggt aacgtgggga
     2581 atcacaaccc agttgcggga caggttttga ccggaaattt tcttaatgcg ggacaattct
     2641 ttaacttcga cattgccgaa tttggagaag tccactttag gccacggcag taagtccaga
     2701 ccgccgccca aagatgcgct ggctgcggca ggttttgccg cgccgccctg catcacggat
     2761 ttcacaaagg ctttgatgtc gtcgcccatg atacggcctt tcaagccggt gcctttgact
     2821 tggcccaaat ccacgcccaa ttcgcgcgcc agtttgcgtg cggaaggacc ggcgtgtgct
     2881 ttggcgaaag cggcctcgtc gattttggca gcggcaggtg cagaaggtgc gggcgcggcg
     2941 gcagcagccg gaaccggagc ggcagccggt gcgggtgcgg cagcttgagc ggcaggcgca
     3001 ggggctgctg cggcagagcc ggcggtttct acttcgataa ttgcagagcc ttcggacact
     3061 ttgtcgccga cttttaagaa tacggcttta acgacaccgg cagcggtaca aggtacgtcc
     3121 attgtcgctt tgtcggtttc caaagtaatc agcgtgtcgt cttcggcaac ggtgtcgccc
     3181 actttgattt caacggcgat gacatccaca tcggtatggc cgccgatatc gggaacggct
     3241 acttgaacgg ttgcaccgcc tgcggcaacg ggtgcggcag caggtgcagg ttgtgcttcg
     3301 gcagcagcag gagcggcttc ggcagcggcg gcaccggttt caacggtcaa aattacgccg
     3361 ccttcggaga ttttgtcgcc gactttgact tttacttctt tcacgacacc ggccgcatcg
     3421 gcaggcacat ccatcgtggc tttgtcggtt tccagtgtaa tcagggtgtc gtcaacggcg
     3481 atggtgtcgc ccgctttaac ttctacggcg atgatgtcga cgttttcgtg accgccgata
     3541 tcggggactt tgatttctac gatactcatt tgagttcctt taatcttgtt cagttggatg
     3601 ccgtctgaaa gctgcttcag gcggcatcgg tacggtttgt ctgctcaaac cattcgggca
     3661 ttcggttttc agacggcctg atgtcggaat ggggcaaaca gaccgtctga aacatcaatc
     3721 agcgtttcca gctaggagct gaatcggctt tgatgccgta tttctcaatg gcttgttgaa
     3781 cggtttcttt gctgactttg ccttgttccg ccaatgcgct caatgctgcc acggcaacgt
     3841 tgtagcgatc cacttcaaag aagcggcgca ggttggcgcg gctgtcggag cggccgaagc
     3901 cgtcagtacc caagacgtgg tagtcgttcg ggatgtaggc gcggatacgg tcagcatagc
     3961 tgcggatata gtcggtagcg gcaataaccg gaccgtcatg accttgcaat ttggaagtaa
     4021 cgaaaggtac tttttcggct tccagcggat gcaggcggtt gaagcgttct acctcgacag
     4081 cgtcgcggtg cagcaggttg aaggacgggc aagaccaaat gtctgcttcc acgccgaagt
     4141 cggctttcag caattcggca ccggcaatga cttcttgcag gatggtaccg gagcccatca
     4201 attgaacttt cttatcgcct ttgccgccgg ctttcagcag gtacatacct ttcaagatgt
     4261 cttgttctgc gccttcgggc atatccggat gggtgtagtt ctcgttcatc agggtgatgt
     4321 agtagaacac gtcttcatta ttggcataca tacggcgcag accgtcttgt acgatgacgg
     4381 cgacttcgta ttggaaagtc gggtcataag atacgcagtt cggaatcagg tcggcctgga
     4441 tgtggctgtg gccgtcttcg tgttgcaggc cctcgccgtt cagcgtcgta cggccggcag
     4501 taccgcccag caggaagccg cgcgcgtgca tatcgcccgc cgcccaagcc aagtcgccga
     4561 tacgttggaa accgaacata gaatagtaaa tgtagaacgg aatcatcgcg aagttgctgt
     4621 tggcgtagct ggttgcagcc gcaatccagt cggccatcgc gcccggttcg ttaatacctt
     4681 cttgcaagat ttgaccgtca acggattctt tatagaacat cagttggtct ttgtcttgag
     4741 gggtatattg ctgacctttc ggattccaaa taccgtattg gcggaacata ccttccatgc
     4801 cgaaagtacg gctttcgtcg ggaacgatag gtacgacgcg tttgccgatt tttttgtctt
     4861 tcagcaaagt ggacaggatg cggacgaatg ccatcgtggt cgagaactcg cgttcaccgc
     4921 tggatttgag ttgtgcgtcg aatgctgaca gctcgggcac ttccaatact tcctgcgtcg
     4981 gtttgcgttg cggcaggtag ccgcccaaag catcgcggcg tgcgtgcagg tatttgtatt
     5041 cttccgtatc gggggcaaaa gtcaggtaag gcagatcgcc gctttcgatt tgttcgtcgg
     5101 taaccggaat gtcaaagcgg tcgcggaatt gtttcaggga cgctttgtcc atttttttgg
     5161 cttggtgggc aacgttctga ccttcgccgg atgcgcccat accgtaacct ttaatggttt
     5221 tcgccaagat gacggtaggt ttgccgtcgg catggttcgc tgcgcggtcg taggcgttgt
     5281 acactttttg cgggtcgtgg ccgccgcggt tcaatgccca gagttgctca tcggtcatat
     5341 cggcaaccaa tgctttcagt tcgggcgtat tgaagaagtg ttcgcgcaca tacgcgccgt
     5401 ctttggattt gtaagtttgg tagtcaccgt ccaaacattc ttccatacgt tggcgcagga
     5461 taccgtcttt gtctttcgcc aagaggcggt cccagcggcg gccccaaatg actttgacga
     5521 cattccagcc ggcgccggca aagttgcctt ccaattcttg gatgattttg ccgttgccgc
     5581 gtaccggacc gtccaagcgt tgcagattgc agttgatgac gaaaatcagg ttgtccaagc
     5641 cttcgcgtgc agccagtgcg attgcacctt gagattcggg ttcgtccatt tcgccgtcgc
     5701 cgcagaaaca ccatacttta cggcctttgg tttttgccaa accacgcgat tccaagtatt
     5761 tcaggaaacg cgcctgataa atcgccatga tgggccccaa gcccatggat acggtcggga
     5821 actgccaaaa gtcgggcaag aggtgggggt gcggatagga aggcagaccg tgtccgtcca
     5881 cttcttggcg gaagttgttc agctggtctt cggtcagacg gccctcgacg aatgcgcgtg
     5941 catagatgcc cggggcgacg tgaccttgga agaagaccaa atcgccttct tcgccttcgc
     6001 ctttggcttt ccaaaagtgg ttgaaaccga cttcgtacat ggtggcggca gattggaaag
     6061 atgcgatgtg cccacccagt tccaaatctt tcttgccggc gcgcaatacg atggcggcgg
     6121 cgttccagcg cacgaatgcg cggatgcggt gttcgatgtt ttggtcgccc ggaatgcctt
     6181 tttcgttttc aaccgaaacg gtattcaaat acggtgtggt cgtgccgtgt ggcatacgta
     6241 cgcccttgtc gcggcagtat ttgaccaggt tttccaagag gtattgcgcg cgttcgccgc
     6301 cttcatattc gaggacggag cttaacgcgt ccagccactc ttgggtttcg atagggtcaa
     6361 catcgtgtaa ttgggtggac atagtatcta tcctttatgt tgagtgttta atcggcaggg
     6421 agggtgtagc caaccccttt attttcgttt gtgaaaaata ataagcaaaa acgaaaattt
     6481 ctaaatcaaa ccgaaaaaaa taatttaagt ttaatgtttt caaaaaatta taaaagtttt
     6541 ggaaacaagg gaaaacttga aaaaaatgtt cgatctgctc cacacgaaat cctatcagca
     6601 atcgggtctg ctggcaaata accatgcctg taaaagcagg ttttatactg aagttggcgt
     6661 ttggtaaggt caagtctttt tgatttcgaa atattctgtt tgattttggc gatatttttt
     6721 cggaattgtg gtatatcgaa tcattatgtc tctgtcggca attttcctat tgtagaaaat
     6781 ctatacacaa gctttgtgga taaccgtgtt gataagccac ggcttgtgtt aaaaaagtct
     6841 tacgcaacaa atgtacgctt attttgatta aaaaataggc acatttaaat ctataaaaat
     6901 catgtgctta tgttcaatat gatgtttctg gtcatgtttt tgccgtctgt tatgggattt
     6961 gtcccgcgct tggggcaggg ggtaaatttt ggaggttggt gcaaaacctg cttttttcgc
     7021 gttacaatct gcacccgatt tacttttgaa tttgcctgtt tggaaaaata tttttatgaa
     7081 agccagccaa ttctttatct ctactttaaa agaagcccct gccgaagccg cgcttgccag
     7141 ccacaagctg atgatacgcg ccggtctgat taaagccaac gcgtccggcc tttatacttg
     7201 gatgccgatg gggctgcgcg tgttacgcaa agtcgaaaac gtcgtgcgcg aggaaatggc
     7261 gcgcgcgggc agcgtggagc tgctgatgcc ggtggtgcag cctgccgagc tgtggcagga
     7321 atccggccgc tgggaatttt acggtaaaga actgctgcgc ctgaaagacc gccacgaccg
     7381 cgatttctgc atgggaccga cctgcgagga agtcatcgcc gacatcgtgc gcaaagaaat
     7441 caacagctac aaacagctgc cgaaaaactt ttaccacatc caaaccaaat tccgcgatga
     7501 agtgcgcccg cgtttcggcg tgatgcgcgc gcgcgagttc gtcatgaaag acgcttattc
     7561 cttccatgcc gactacgcct cgcttcagac gacctatgat gccatgtatg acgcttactg
     7621 ccgcatcttt acccgtctgg gcttggcatt ccgccccgtc gccgcagaca ccggcagcat
     7681 cggcggtacg ggttcgcacg agtttcaagt gttggcggaa agcggcgaag atgttattgc
     7741 atacagcgac acttccgatt acgccgccaa tatcgagttg gcaccgacct tgccgcttaa
     7801 aggcgaacgc accgctgctc aggccgagtt gaccaaagta catacaccaa atgtcaaaac
     7861 cattgagtct ttggttgaat tcctgaatat tccggttgaa caaaccctca aatccatcgt
     7921 ggtcgaaagc gaaaacgaag gcgaaatcgt cttattactg ttgcgcggcg accatgagtt
     7981 caacgacatc aaagccgaaa aactcgcagg cgtgaaatcg ccattgacga tggcaagttc
     8041 tgccgcgatt gtcgaacagt tcggcgcaaa cggcggctct cttggtcctg tcggcttcaa
     8101 aggcaaagtc tatgccgatt tcgctaccga aaaaggcgcg gactgggtca tcggtgcgaa
     8161 cgaagacggc taccactaca ccagcttcaa cttcgggcgc gatgccgccg agcctgaatt
     8221 cgtcgatttg cgtaatgtgg tcgaaggcga cgaaagcccc gacgggcaag gccgtctgaa
     8281 actcgcgcgc ggcattgaag tcggacacgt cttccagttg cgcgacaaat acacccaagc
     8341 catgaacgta agcttccttg acaacaacgg caaatcgcaa attatggaaa tgggctgcta
     8401 cggcatcggc atcacccgcg tcgttgccgc cgccatcgag cagaataacg acgaaaaagg
     8461 catcatctgg accaaagcaa tggcgccgtt tgaagtcgtt atcgtgccga tgaactacaa
     8521 aaaatcagac accgtacgcg aagccgccga caaaatctat gccgaattgc tggcggcagg
     8581 cgcggatgtg ctgctggatg accgcgacga acgcgcaggc gtattgctga acgattccga
     8641 gctgttgggt attccgcacc gcatcgtcat cggcgaccgc gctttgaaag aaggcaatgt
     8701 cgaatacgcc gaacgccgca acaacgaagc gcaggcagtt gcaatcggag aaattgttgc
     8761 gcgtgtaaca gctttattaa atgggtaagc ttggtcaaat gccgtctgaa aataatttca
     8821 gacggcattt ttatttgggg agaaagtgaa gtggcttcag tatttttaga aggagaagca
     8881 gtcgaggtcg gcaatatttt ctgtatcggc aggaactatg ccgcacatat tgaagagtta
     8941 aaaaacgaaa taccttccga acctgtggtg tttatgaagc cgtcaggcag cattttgaac
     9001 agcggcggta caatcttgct gcccgagttt agtagggatg tgcagtttga gtgcgaactc
     9061 gtgctgctgg tcggtaagga ttcagacggc acgggcgagg gtaaagatat tttgggatgt
     9121 gtcgcaggat atggtgtagg gctggacctt acggcacggg atatccaatg ccgtctgaag
     9181 gaaaaagggc tgccctggct gaaggcaaaa gggttcaggc attccgcgtg cgtgtcggat
     9241 tttgcggcgg caggcagaat cggcaatccc gagaatgtgt tgttttcatt aaaacaaaac
     9301 ggcgtattga aacagcgcgg ggataccggt ttgatgattt acccgattcg ggaaatttta
     9361 cacaaactgg cggcagatta cggtttgggg aaaggggatt tggtgtttac cggaacgccc
     9421 tccggcgtgg gcgcaatcgg tgcgggggac aatttggcat tggagctgga cggcttggtg
     9481 cgcgcctctt tcacggtagg gtgttaaccg cgccgcttaa ccctcacgcc cgttgaaaca
     9541 ttccgccgga ccgccctcga aaaaaccgtg caagatggct tgcgccgcca cttggtcgag
     9601 caccgatttg cgttttttgc cgaagacctg tgcttccgaa agcaggcttt cggcatagac
     9661 ggacgacagc cgttcgtcaa cccaatagac ggggagattg aacctgccgt tcagcctgcg
     9721 tccgaacttg cgcgacaggt gcgtcatttc atgtttcgtg ccgtcggtat gcacgggcag
     9781 tccgacgaca aaataacgcg gctgccattc ttgaaccagc ttggcgattg ccgcgaactt
     9841 ttcatcgttg ctgccgccgg taacggtgct caaaggatgg gatagcccta attccgcgtc
     9901 tccttgtgcc acgccgatac gcgcttcgcc gaagtcgaat gccagtgccg ttccttttgg
     9961 aattttatgc atggccggct cccgaaaaca gggcgagcgg gtcgatgccg agtttggcga
    10021 atgcggcggc gtaacggtgt tcgtagggga tgtcgaacag gatgtgttcg tcggcgggaa
    10081 cagtcagcca cgcattgtcg gcaagttcgc gttcgagctg gccttttccc cagcttgaat
    10141 agcctatgct gatcaaggct ttgtcaaccg caccttcgcg tgaaatattt tcaatcacgt
    10201 ctcgggaaga agttagcgcg atattgtctg aaacgccgat actgctttgc cagttgccga
    10261 tcggggtatg cacgacataa cctcgctcga cttgcaccgg cccgcccatc atcacgctgt
    10321 cgtgctgcat ccgcatgggg atgtttttgc cggtggcgga aaaaatcatg tccatcgtaa
    10381 tcggagaggg tttgttgatg gcgatgccga gtgcgccgtc ttcatcgtgt ttgcagatat
    10441 agacgaccga ttgtgaaaaa aacgcgtctt ccatatcggg catggcgacg agaaagtggt
    10501 tggagaggtt catatcagcg tttgtcggga ttttctatcg ggttggaaat catgcaggcg
    10561 ccggcaagca ggttgccgga agtatcggct tgcaccccat cggtttgcgg tatgccgccg
    10621 ccgaaacagg aaaccgcgct taaggaattt ttcggcgagc cttggatgat tttatcgctg
    10681 tacaccaaat aggcgaaggt tttgcgtttg gggtcgtaat aacggacaat ctgccggctc
    10741 ttgaacgcga agctcgcacc gtgtttgaaa acttctttcg gtttgcgcac ggcggtttcg
    10801 tcaaaagaaa tcgaagatgc cgtctgaacg cacgaaaccg atgcgtcgga cgcgtcctct
    10861 tccaaattga ccatttcctt caagccgcct ttttttgcat acgaaatata acaggcaacc
    10921 ccttgaacgt cgggatcgtc gaatccttcc acttcgatac ggtcgttttt gcccagtatg
    10981 ttgaaaacgg tacttgcccg tccgatttta tcggtttcgc cgctgccgca ggcagtcagc
    11041 aggacggcgg cagacagcag tagcagtctg ttcatcaaaa tttccttatc ggttgaatcc
    11101 ccgttttccg tgaaggcggc agggcttgct ttgtttggag gggcgcacgt tcccaaaatc
    11161 gggcaacata cggtatgcgg cttaatgtgc taccctgtgt gtcggaacac aatatccgtt
    11221 gcggcattga aaatatgatg cacaatataa ggctgtttga gccgattgca agtatccgcg
    11281 caaagaaggc gcaagattgg gcaaacggca ttttcagacg gcataactga cagtataatc
    11341 caaacgtccg gctgctttcg tgcagccttc agtattatcc aactttttcc gaaggtcgaa
    11401 ccatgcgcta caaacccctt ctgcttgccc tgatgctcgt tttttccacg cccgccgttg
    11461 ccgcccacga cgcggcacac aaccgttccg ccgaagtgaa aaaacagacg aagaacaaaa
    11521 aagaacagcc cgaagcggcg gaaggcaaaa aagaaaaagg caaaaatggc gcagtgaaag
    11581 ataaaaaaac aggcggcaaa gaggcggcaa aagagggcaa agagtccaaa aaaaccgcca
    11641 aaaaccgcaa agaagcagag aaggaggcga catccaggca gtctgtgcgc aaaggacacg
    11701 aaggggataa gaaatcgaag gcggaacaca aaaaggcaca tggcaagccc gtgtccggat
    11761 ccaaagaaaa aaacgcaaaa acacagcctg aaaacaagca aggcaaaaaa gaggcaaaag
    11821 gacagggcaa tccgcgcaag ggcggcaagg cggaaaaaga cactgtttct gcaaataaaa
    11881 aagtccgttc cgacaagaac ggcaaagcag tgaaacagga caaaaaatac agggaagaga
    11941 aaaatgccaa aaccgattcc gacgaattga aagccgccgt tgccgctgcc accaatgatg
    12001 tcgaaaacaa aaaagccctg ctcaaacaaa gcgaaggaat gctgcttcat gtcagcaatt
    12061 ccctcaaaca gcttcaggaa gagcgtatcc gccaagagcg tatccgccaa gagcgtatcc
    12121 gtcaggcgcg cggcaacctt gcttccgtca accgcaaaca gcgcgaggct tgggacaagt
    12181 tccaaaaact caataccgag ctgaaccgtt tgaaaacgga agtcgccgct acgaaagcgc
    12241 agatttcccg tttcgtatcg gggaactata aaaacagcca gccgaatgcg gttgccctgt
    12301 tcctgaaaaa cgccgaaccg ggtcagaaaa accgcttttt gcgttatacg cgttatgtaa
    12361 acgcctccaa tcgggaagtt gtcaaggatt tggaaaaaca gcagaaggct ttggcggtac
    12421 aagagcagaa aatcaacaat gagcttgccc gtttgaagaa aattcaggca aacgtgcaat
    12481 ctctgctgaa aaaacagggt gtaaccgatg cggcggaaca gacggaaagc cgcagacaga
    12541 atgccaaaat cgccaaagat gcccgaaaac tgctggaaca gaaagggaac gagcagcagc
    12601 tgaacaagct cttgagcaat ttggagaaga aaaaggccga acaccgcatt caggatgcgg
    12661 aagcaaaaag aaaattggct gaagccagac tggcggcagc cgaaaaagcc agaaaagaag
    12721 cggcgcagca gaaggctgaa gcacgacgtg cggaaatgtc caacctgacc gccgaagaca
    12781 ggaacatcca agcgccttcg gttatgggta tcggcagtgc cgacggtttc agccgcatgc
    12841 aaggacgttt gaaaaaaccg gttgacggtg tgccgaccgg acttttcggg cagaaccgga
    12901 gcggcggcga tgtttggaaa ggcgtgttct attccactgc accggcaacg gttgaaagca
    12961 ttgcgccggg aacggtaagc tatgcggacg agttggacgg ctacggcaaa gtggtcgtgg
    13021 tcgatcacgg cgagaactac atcagcatct atgccggttt gagcgaaatt tccgtcggca
    13081 agggttatat ggtcgcggca ggaagcaaaa tcggctcgag cgggtcgctg ccagacgggg
    13141 aagaggggct ttacctgcaa atacgttatc aaggtcaggt attgaaccct tcgagctgga
    13201 tacgttgatc ggattgccga aacggtaggc tttatgcaaa tcgtgccgat atggtgcgct
    13261 gttccgtgaa gtttgccgtt tgccgtacct gtattttccg gtttttggaa atcaagagag
    13321 aaagttaaag aagaatgtcg aaacctgttt ttaagaaaat cgcactttat actttgggtg
    13381 caatcagcgg cgtggccgtc agtctggcgg tgcagggttt tgccgccgag aaggacaggc
    13441 gggataacga agtcctgccg gtgcaatcca tccgcacaat ggcggaggtt tacggtcaaa
    13501 tcaaggcaaa ctactatcag gacaaacccg atgccgattt gtttgaaggt gcgatgaagg
    13561 gtatggtggc cggtttggat ccgcattccg aatatatgga taaaaaaggt tatgccgaga
    13621 taaaggagtc caccagcggc gaatttggcg gcttggggat ggaaatcggg caggaagacg
    13681 gatttgtcaa agtggtttcg ccgattgagg acacgcctgc ggaacaggcg ggggtgaaaa
    13741 gcggcgattt cattgtgaaa atcgataatg tttcgacacg cggcatgacg gtcagcgaag
    13801 cggtgaagaa aatgcggggc aagccgggta cgaagattac tttgacgctg tcgcgcaaaa
    13861 atgccgacaa gccgatagtc gtcaacctga cccgtgccat tattaaagtg aaaagcgtcc
    13921 gccatcacct gatcgaaccc gattacggct atatccgcgt gtcgcagttc caagagcgga
    13981 cggtcgaaag cgtcaatacc gccgcaaaag agctggtaaa ggaaaataaa ggaaaaccgc
    14041 tcaaggggct ggtgttggat ttgcgcgacg accccggcgg gcttttgaac ggcgcggtcg
    14101 gcgtgtcggc ggcgtttttg ccgcctgaag cagtcgtcgt cagcaccaag ggacgcgacg
    14161 gcaaagaccg catggtactg aaagccgttc ctgaggatta tgtgtacggg atgggcggcg
    14221 atccgttggc gggcattcct gccgagttga aaaccgttcc gatgacggtg ttgattaatt
    14281 ccggttcggc ttccgcgtcg gagattgtcg caggtgcatt gcaggatcac aaacgcgcgg
    14341 tcatcgtcgg tacgcagagc ttcggcaaag gttcggttca gactttgatt cctttgtcca
    14401 acggcagcgc ggtcaagctg acaacggcac tgtattatac gccgaacgac cgttctattc
    14461 aggcgcaggg gattgttccc gatgtcgaag taaaagataa ggaacgcatt tttgaaagcc
    14521 gcgaggcgga tttggtcgga cacatcggca atcctttggg cggcgaggat gtgaacagtg
    14581 aaacccttgc cgtgccgctt gaaaaagatg cggataagcc cgctgtaaaa gaaaaaggta
    14641 aaaagaaaaa ggacgaggat ttgtcttcaa ggcggattcc caaccctgcc aaagacgacc
    14701 agttgcggaa agctttggat ttagtcaagt cgcccgagca gtggcagaag tctttggggc
    14761 tggcggcgaa aaagccggtt tcaaataaag ataagaaaga taaaaaagat aagaagtagg
    14821 ttttgacgat gccgtctgaa aggatttcag acggcatatt atgtttgaaa ggacaggtta
    14881 tgagcgattt tttaccggaa tttgaaccgt gcgg
//
LOCUS       DAXHKG010000041        14902 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.041, whole genome shotgun sequence.
ACCESSION   DAXHKG010000041 DAXHKG010000000
VERSION     DAXHKG010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14902
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.041"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(87..3572)
                     /gene="smc"
                     /locus_tag="ACFMWP_000964"
     CDS             complement(87..3572)
                     /gene="smc"
                     /locus_tag="ACFMWP_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HFC5891587.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAVQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDHAAAPQLWQHITAPAEWQHALSVILAERLHARAVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHYWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIVTLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIAQLEQQTLDWQERQQELVLAYETEFQNDEQHIKLDELT
                     ESVHTLDEEYIAVQEKLTQIQEQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            3574..3825
                     /locus_tag="ACFMWP_000965"
     CDS             3574..3825
                     /locus_tag="ACFMWP_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891588.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            3822..4544
                     /gene="lpxH"
                     /locus_tag="ACFMWP_000966"
     CDS             3822..4544
                     /gene="lpxH"
                     /locus_tag="ACFMWP_000966"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HFC5891589.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            4813..6399
                     /locus_tag="ACFMWP_000967"
     CDS             4813..6399
                     /locus_tag="ACFMWP_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HFC5891590.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6567..6770)
                     /locus_tag="ACFMWP_000968"
     CDS             complement(6567..6770)
                     /locus_tag="ACFMWP_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HFC5891591.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6886..7383
                     /locus_tag="ACFMWP_000969"
     CDS             6886..7383
                     /locus_tag="ACFMWP_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HFC5891592.1"
                     /translation="MTALTLPEDIRQQEPSALLYPLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            7465..8658
                     /locus_tag="ACFMWP_000970"
     CDS             7465..8658
                     /locus_tag="ACFMWP_000970"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HFC5891593.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEATAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(9061..9996)
                     /gene="hemC"
                     /locus_tag="ACFMWP_000971"
     CDS             complement(9061..9996)
                     /gene="hemC"
                     /locus_tag="ACFMWP_000971"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HFC5891594.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLKLDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10115..10630
                     /gene="ybeY"
                     /locus_tag="ACFMWP_000972"
     CDS             10115..10630
                     /gene="ybeY"
                     /locus_tag="ACFMWP_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HFC5891595.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            10632..11456
                     /locus_tag="ACFMWP_000973"
     CDS             10632..11456
                     /locus_tag="ACFMWP_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HFC5891596.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(11585..12964)
                     /gene="nhaC"
                     /locus_tag="ACFMWP_000974"
     CDS             complement(11585..12964)
                     /gene="nhaC"
                     /locus_tag="ACFMWP_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HFC5891597.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVILALMRINAVVAMLFTVMVAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVVKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAIRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13255..14478)
                     /locus_tag="ACFMWP_000975"
     CDS             complement(13255..14478)
                     /locus_tag="ACFMWP_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HFC5891598.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTGVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAIAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3516 a         4198 c         3830 g         3358 t
ORIGIN      
        1 tttaaattta attcactata ccgtctgaaa acctgtatcg caacacgtca ttaaaaacgg
       61 caagattcag ccgttctgca acccgttcaa acggcttccg ccatttccaa cgcctgcttg
      121 atgtccacgg cgacgacgcg cgatacgcct ttttcctgca tggttacgcc gaccagctgc
      181 tctgccattt ccatggtcag gcggttgtgg gagatgtaga ggaactgggt ttgcgccgac
      241 atttctttga ccaggttgca gaaacgcgag gtgttggcgt cgtccagcgg ggcatcgacc
      301 tcgtccaaaa ggcagaacgg agcggggttg aggctgaaca gagcgaacac gaggctcatg
      361 gcggtgaggg ctttttcgcc gccggagagg aggtggatgg tgctgttttt cttgccgggc
      421 ggacgcgcca taatggacac accggcggtc agtaggtcgt cgcctatcat tttgagagtg
      481 gcttcgccgc cgccgaacag ggtcgggaag aaggtttgga ctttgccgtt gacggcgtcg
      541 aaggtttctt tgaaacgcgc tttggttttg tcgtcgattt gggcgatggc ttcttccaaa
      601 atggtgatgg cggcctgcac gtcttcgctt tggctgcggt agtagccgtc gcgttcgcgc
      661 gcttcttcga gttcttgcag ggcggcgagg ttgaccgcgc cgagggcttc gatttgttgc
      721 gagaggctgc cgatgctgct gttcaatact ttcggcgatt ctttcgccaa cgcttcgagc
      781 gcatccaaat cggcggcgcg ttcggtcagg ttttgatggt agcgtttggc gttgatcagg
      841 gcttcctgtt gttgcaacag ggcggtttgg gtggcggcct gaagctgtgg caactgggtt
      901 tgcagggttt gtacgcgggc gtattgttcc ctaccctgct cctgaatctg cgtgagtttt
      961 tcctgcacgg cgatgtattc ttcgtccagc gtgtgtacgg attcggtcag ctcgtcgagc
     1021 ttgatgtgct gctcgtcgtt ttggaactcg gtttcatagg cgaggacaag ctcttgctgg
     1081 cgttcctgcc agtcgagggt ttgctgttca agctgggcga tttgctgccg gtagttttgt
     1141 ttttgctggt tgagtttgtg gacggcgact tcggcaagcc catattggcg gttggcttcc
     1201 aacagggcaa gctgcgcctg tttcagacgg ccttgctgct cttggcggct gtgcgcggtg
     1261 gtttgctgct ggtgttcgag ttcggcggcg gcttcctgca aggtaacgat gtcgtctgaa
     1321 agcccgtcgg acgtgtgttg caacacggtc tgttcttccg ccaactgcgc cagttcgcgc
     1381 tcgatgtgtt cgcggcggat ttgcccttgg ttggtacgcg ctaagagttc ggcggcgcgt
     1441 tgctgcgcct gactgtattg gcgcgtgtgc tgctgttgct gctgcatcag gtttttatgt
     1501 tgcacttcag acgagcgcac ggcagcttcc gcctgtttga acgcggcttc ggcggcggaa
     1561 agttcggggg cgaggttttc cagttcggac gcgatgccgt cgaggcgcgc tttttgggca
     1621 atcaggcttt cctgcgcggg tttggcatag agcaggacgc tgactttatc gacctgatga
     1681 ccttcgggcg tgagccagat ttggtgtgcg cccaaatcgt tttgatgcgc gagggcatag
     1741 ctcaaatcgg gcgcgcacaa tacgccgtcg agccagtagt gcaatgccgt ctgaaacggc
     1801 ggctgcgctt ggatttggtt cagcaatgcc tgtacgggca gggatttttt gatgccgccg
     1861 gagagaccgt ctgaaagcca cgccgcctgc ccctgcggca aaggttcggg cggtacgaaa
     1921 ccttgcggca cggcgcgggc gtgcaggcgt tctgcaagga tgacggacaa ggcgtgctgc
     1981 cactcggcag gcgcggtgat gtgttgccac agctgcggcg cggcggcgtg gtcggttgcc
     2041 tgccagaaat cggctgcttc ctgctgttgc gacaggattt gcgacaacgc ctgctgctgc
     2101 gcctgcaagg tgatatgttg ctgcttcagg ctttggaagc ggtttgaggc cgtctgaaac
     2161 gcctcgcggg cggcgtgtaa ggcttcttcg gcggcgatga tttgttcttc gtaatgctct
     2221 tgccggcttt gcaacaaggc agcggcctcc tgcacggcgg cggtttccgc ttcgtcgggc
     2281 aggttcaggg cttggttctc ctgtttcaga cggcctttgc gctcttcgtg cttggcaacg
     2341 gtttgttcgg catgggcaag ctgctgctgc ttcaacgcca gttcgcggcg gatgcggttt
     2401 gcctcgtcct gctgggtttg gaaggcggca ttgagcgcgg tttgggtttc ttccaattcg
     2461 ggcagacgct cttcgtgttc ggcaacctgc atcgcccact ccgccagctc ggtttgcttt
     2521 tcttcgacgt ataactcgtt ttcttcaagc tgcacgcgga tttgctgctg ctcttgatga
     2581 atacgctgca actgcgcctg cgccgcctgc ttgtcgcgtt cgatgcgttg gtgcaggttt
     2641 tgctgatggc ggatttgttc ttccaaacgg gcaatctgct cgcgcaacac gccgcgcttg
     2701 ttgctcaatt catgcaccgc ctgttgctgc gactgttcgg cggtctgcaa ggcgtgtact
     2761 tcgtcgttta acgcctgaac ctgcgcggcg gtttcgtcct gctgcgcctg caaagactga
     2821 tgctgctcgg tcgccttgtc ggcggcggca agcgattgct gccattgggc gtaatcgagc
     2881 aaatcctgtt gccggttcaa ctgcgcggtc agggatttgt agcgttcggc ggtttccgcc
     2941 tgtttctcca gcttttccac ctgacgcgcc aattcgttct gcaaatcgcc caaacgctgc
     3001 aaatgctcgc gcgtgtcttt cagacggcct tccgtctcct tgcggcgttc cttatatttg
     3061 gacacacctg ccgcctcctc gatataggcg cgcaattcct ccggccgcgc ttcgatgatg
     3121 cgcgaaatca tcccctgctc gataacggca taaccgcgcg cgcccacgcc cgtacccaaa
     3181 aataaatcgg taatgtcgcg gcggcgcacg gtctgattat tgatgaaata agtcgattcg
     3241 ccctgccgcg tcagctgccg cttgatgctc acctcggcat actgccccca cgcgccctgc
     3301 aaactgtggt cgctgttgtc aaacaccagc tccaccgaag ctcttggcgc aggacggcgc
     3361 gttgccgcac cgttaaaaat cacgtcctgc atactctcgc cgcgaagctg cttcgccgaa
     3421 gcctcgccca acacccagcg caccgcgtca atcacattcg acttgccgca gccgttgggc
     3481 ccgataaccg cgacaagctg ccccggcaca tgaattgtgg tcgggtcggt aaaagatttg
     3541 aagccggaga gtttgatatg ggtcaggcgc ataatggtcg gaaaaaataa aaaagaagcg
     3601 tattttaacg gaaatcccgc cgcaccaccc catatcttgc cggcaaaacc ttaccgcatc
     3661 ccgcaccctc gatgccgtct gaagccttca gacggcattt ttaacgcgcc cgaaccccga
     3721 ttccgccaac gcccgatgct tggcgcggca tttgccgtat tgccccgccg ccgggcgcgt
     3781 tataatccgc cacgacatcc gcccgatttg gaaacctgcc tatgaaaccc gcctatttca
     3841 tctccgacct gcatttgagc gaaaagcacc ccgaactgac cgcgctgttg ctgcgttttt
     3901 tacgttcttc cgccgccggg caggcgcggg cggtttacat tttgggcgat ttgtttgatt
     3961 tttgggtggg cgatgacgaa gtttccgagt tgaatacttc ggttgcgcgt gaaatcagga
     4021 aattgtccga caaaggcgtt gccgtgttct tcgtcagggg caaccgcgac ttcctgattg
     4081 gtcaggattt ttgccggcag gcaggcatga cgctgctgcc ggattactcg gttttggact
     4141 tgttcggctg caaaaccctc atctgccacg gcgacactct gtgtacggat gacagggcat
     4201 accaacgttt ccgcaaaatc gtgcatcgga agcggctgca aaaactgttc ctgatgctgc
     4261 ccctgaagtg gcgcacgcgc cttgccgcca aaatcaggcg cgtcagcaaa atggaaaaac
     4321 aggtcaagcc cgccgatatt atggatgtca atgccgcctt taccgcgcgg caggttcgcg
     4381 cctttaacgc ggaaaggctg atacacggac acacccaccg cgagcatatc catcacgaaa
     4441 acggctttac ccgcatcgtt ttgggcgact ggcataacga ctatgcttca atcctccgcg
     4501 tggacgggga cggcgcggta ttcgtgccgc tggaaaaatg ctgaaaatgc cgtctgaagc
     4561 ctttcgggcg gcttttttta cacgcccctt tcccacactc cctccgccgc atcatcacca
     4621 tccttaaccc gcattaatgg gcgttatcga taaaatgctt gaccgattac ataagattac
     4681 gtaaagtgtg caaacgcata acaattggtc ttaccaattt atcttttaac caaaatatcg
     4741 ggtgtacggg atttgaacgt ctttccaaac ctcgacgcgc cttatgatgc aaatgcctaa
     4801 aaaggattcg ttatggcact tttcctcagc atattcccca tcgtcctgct gatttggctg
     4861 atggtgaaaa aaaacagtat gccctcctac gtcgcgctgc cgattaccgc agtgctgatt
     4921 tacgccatca aacttttcta cttcggcgat gcgggcatgc tgctcaacgc caccgccgct
     4981 tccggcctcg tcaaaacgct cacgccgatt accgtgattt tcggcgcgat tatgttcaac
     5041 cgtatgatgg aaaccacggg ctgcattgat gtcatccgca aatggctggc gaccatcagc
     5101 cccaaccccg tagcgcaact gatgattatc ggctgggctt ttgcctttat gattgaaggc
     5161 gcatccggct tcggcacgcc tgccgcgatt gccgcgccga ttctgatgag cttgggcttc
     5221 aacccgttga aagtggcgat tttcactttg gtgatgaact ccgtccccgt ctctttcggc
     5281 gcggtcggta cgccgacctg gttcggtttc gcaccgctga acctgagtgc cgaagacatc
     5341 ctcgccatcg gcaggcagac cggcgtaatg cacttcttcg caggtttcgt catccccgtc
     5401 atcggcttgg gcttcatcgt accttggtct gaaatccgca aaaacttggg cttcgtcgcc
     5461 attgccgtct tctcctgcac cattccttat gtcgcattgg cgatggtcaa cgaagaattc
     5521 ccgtcgctcg tcgccggcgc aatcggcctg atggtgtccg tattcgccgc caaccaaggc
     5581 tggggcttga gcaaagacca cgccaaagac ccgaatgccg aaaaagtgcc gttcgcccaa
     5641 gtcgccaaag cactcgcccc tttgggtatg ctgatcggca tgctggtggt tacgcgcatc
     5701 aaacagctcg gcatcaaagg cattttgacc agcaaagaag aatggttcag cttccaactg
     5761 ccgtttgatt tgtccaaaat caccgtcagc gactccctga cgattacctt cggcaatatt
     5821 ttcggacaag atgtcagcgc gtcttaccaa acgctgtacg tcccggcttg gattccgttt
     5881 gtgctgaccg tttggatttg catcctgctg tataaaacca aattcaaaga tgcctggacg
     5941 atttattccg taactttcaa tcaaaccaaa aaaccgctgc ttgccctgat gggcgcgctg
     6001 attatggttc agctgatgct ggtcggcggc gacaattcga tggtgaaaat catcggtaag
     6061 gaatttgccg caatggcggg cgaacactgg gtttatttct cgccgtatct gggcgcgatc
     6121 ggtgcgttct tctccggctc caacaccgtg tccaacctga ctttcggccc gattcagcag
     6181 caaatcgcct tggataccgg cctgtccgtt accctgattc tggcgttgca gtccgtcggc
     6241 ggcgcgatgg gcaatatggt gtgcctcaac aacatcatcg ccgtatgtac cgtattggat
     6301 gtgaaaaatt ccgaaggtgc gattatcaag aaaaccgtta tcccgatggc gatttacggc
     6361 gtgattgccg tcgtcgcggc aatgattttc ttcctctagg cgaaacgcca ccatccatag
     6421 cggcagcacg cggggaacgg aaaccgccgt tccccgtctg ggcggcgcgt cgggcagaat
     6481 cccggtgccg gaacagcccg ccccgccaaa caaatgccgt ctgaaaccgg aaaaggcttc
     6541 agacggcatt tttccgccgt ttgcattcag gcgtaatgat gatgcggcat cttgccgtca
     6601 aggcggtagc gcgtgccgca atacgggcag gcaacgctgc ccgattctcc ttcgcacaaa
     6661 ggcaaaaaca ctctcggatg cccgttccac tgctcgttgt cgggtcccga gcaatacagc
     6721 ggcagatttt ccggcaacac ggaaatttcc tgcagattca gattgtccat ttgattttcc
     6781 tttgcgtggt tggcgtgcgc ccattttacg ccatcggcag gctaaaggat attttcggcg
     6841 caaagccgca atccgctata atccccactt ttcagacggc ataccatgac tgcgcttacc
     6901 cttccggaag acatccgcca acaagagcca tccgccctgc tctatcccct cgtttccgcc
     6961 tacctcgaac acaccgccca aaccggcgac gaatccctct cctgcctgtc cgacgaccag
     7021 cacacgctga ccgcattctg ctacctcgac agccaagtcg aagaaggcgg cttcgtgcaa
     7081 ctcatcgcct ccggttacgg cgaatatatt ttccgcaacc cgcttgccga cagcctgcgc
     7141 cgctggaaaa tcaaagccgt gccgaaagtc ttggacaaag ccaaagccct ctacgaacaa
     7201 cacggcaaaa ccatcgaaac gctcgccgac ggaggcgcag acatcgaatc cctgcgcaaa
     7261 cagttccccg actttgaaga atgggacggc gcatactacg aagccgccga acaagacctg
     7321 cccctgcttg cagaacacat acagtcaaac tgggaaacct tcgcccatat cgggcaggcg
     7381 tgattgcgtc tgtttccagc ccgtgtaaaa cagcgtaaaa tcggcaaacc cgaatgacct
     7441 tccgtcccca tcaaggagca agctatgttc ttcaagcaca tcgaagccgc ccccgccgat
     7501 ccgattctcg gtttgggcga agcattcaaa gccgaaaccc gccccgaaaa agtcaacctc
     7561 ggcatcggcg tttataaaga cgcatccggc gcgacacccc tcgtcaaagc cgtcaaagaa
     7621 gccgaaaaac gcctgttgga aagcgaaacc accaaaaact acctcaccat cgacggcgtt
     7681 gccgactaca acgcgcaaac ccaaatcctg ctgttcggca aagaccacga aatcatcgcc
     7741 agccgtcgcg ccaaaacagc gcaaagcctc ggcggtacgg gcgcattgcg tattgcggcc
     7801 gagtttgcca aacgccagtt gaacgcgcaa accatctgga tttccaatcc gacttggccc
     7861 aaccacaacg ccatcgccaa agcggtcggt atccaagaca aaccttatcg ttactatgat
     7921 gccgccaaac acggtttgga ttgggacggc atgattgagg acttgagcca agcgcaaaaa
     7981 ggcgacatcg tcctgctgca cggctgctgc cacaatccta ccggcatcga ccctacgccc
     8041 gaacaatggg aaactttggc aaaactttct gccgaaaaag gctggttgcc gctgtttgac
     8101 tttgcctacc aaggcttcgg caacggtctg gaagaagatg cctacggctt gcgcgtgttc
     8161 ttgaaacaca atacagaatt gctgattgcc agctcttatt ccaaaaactt cggtatgtac
     8221 aacgagcgcg tgggcgcgtt cactttggtg gccgaagatg aagcaaccgc cgcccgcgcc
     8281 cacagccaag tcaaaaccat catccgtacc ttgtattcca atccggcttc acacggcgcg
     8341 aacactattg cgctggtgtt gaaaaatgat gatttgaaag cacaatggat tgccgaactc
     8401 gatgaaatgc gcggccgcat caaagccatg cgccaaaaat ttgtcgagtt gctcaaagcc
     8461 aaaggtgcaa gccaagactt tgatttcatt atcgaacaaa acggtatgtt ctctttcagc
     8521 ggtctgactc ccgaacaagt tgaccgtttg aaaaacgagt ttgccattta tgccgtccgc
     8581 tccggccgca tcaacgttgc cggcattacc gacgacaaca tcgattatct gtgcgaaagc
     8641 atcgtgaaag tactgtaaaa agcacagcca tatgaaaatg ccgtctgaac cttaaccagt
     8701 tcagacggca tctgtttttt gttaaaaaac aataaactat aacaatttca aacaagctaa
     8761 aaacatctat aaaatcaacc caatatgatg aactcaaata aaaatacgaa tatcatcatt
     8821 ctcaaattca aaatttgaac gccacagtat tatccgaagc cacaaaaacc tttccgccgt
     8881 cattcccgcg caggcgggaa tccgggaaac caatgctgca agaattgatt agaaacaact
     8941 gaaaccgagc aaactggatt cccacctgcg cgggaatgac gaaataaggc gagtaaaact
     9001 gatgaaacaa attgattaaa aacaataact tatattattt tatttaaatt ttcgataaaa
     9061 tcaattttcc gtattcaata ctgctccaat caattcccgc gcaccgtcgt ccgccaattt
     9121 cttagcgaca gcgcgtccga gcgcgtcggc atattcggca ggggcttgcg cgtccgcctg
     9181 caacacaacc gaaccgtcgg ggtgtccgac cagtccgcgc aaggtcagca agccgttttc
     9241 ttccgtgcaa tatgcggcca gcggcacttg gcagcttccg cccaaagcgc gcgccaaagc
     9301 tcgttcggcc gtaacgcagg cgtgtgtggt atcgtggttt agcggtttta aaacctcata
     9361 caaatcttcg cggtgcgcgg caatttcgat acccaatgcg ccttgtccgg cggcaggcag
     9421 gctgtcggat tccgacaaaa tcatgcggat gcgtccgtcc aatttcagac gctgcaaacc
     9481 ggcggcggcc aaaataattg cgtcgtattc gccgttatcg agtttggaca aacgggtttg
     9541 cacattgccg cgcaaaggtt tgataagcaa atgcggatag cgcgcgcgca actgggcttc
     9601 gcggcgcagg ctggatgtac cgacgacagc gcctttgggc atttcttcca aacgcgcgta
     9661 ttggttggac acaaacgcgt caaacggatt ggcgcgttcg ccgatggcgg caagcgcgaa
     9721 accttcaggc aaatccatcg gcacgtcctt aatcgaatgc accgccaaat cggcgcgccc
     9781 gtcatataaa gcctgttcca actctttgac aaacaagcct ttaccgccga cttttgacaa
     9841 agttttgtcc aaaatctgat cgccgcgcgt ggtcatgccc aaaatctcga cttcgcaatc
     9901 gggatacaga gccttcagac ggccttggat atgctttgcc tgccacatag caagcaggct
     9961 ttcgcggctg gcgatgacga gttttttcgg gttcatgttc aatgcgttca aagaatggaa
    10021 acggcgtgaa gtctatcata ttttgaacgt ttcttcagac ggcaccgtca ggtctatgtt
    10081 atatttacac ccacaaaaca cgaaacccgc cacaatgaaa cgcaccaaaa aatacccttt
    10141 cttaacgttg cagcggcaac gtttccattt gaactttgaa aacgcctctt ccgccgccgg
    10201 catcccagcc gaacgcgatt tctaccgctg ggcgtggtct gccttgaaaa atgaataccg
    10261 ccgcgccgac atcagcctga ttcttctgga cgaagaagaa gcccgagcct acaaccgcga
    10321 ctaccgcggc aaagattacg ccaccaatgt attgagtttc gcgctcaacg aaggcgaaat
    10381 cctgccctgc caagtttcgg aaaaactgta cggcgatttg attatctgcc cgcaagtggt
    10441 tttgaaagaa gccgccgaac agggcaaaac gcccgaacgg cattttgccc acctgaccat
    10501 acacggcgtt ttgcacctga tgggctacga ccacatcgaa gacgatgaag ccgaaataat
    10561 ggaagccgaa gaaatccgcc tgatgctggc ggcaggcttc cccaacccct accaagagga
    10621 cgaatattaa aatggacggt acgcagtcga aacccaagtt tttcgaacgc ctgatctccc
    10681 gacttgccgg cgagcccgac tccgccgaag acgtattgac cctgctgcgc caagcgcacg
    10741 agcaggaagt ttttgatgcg gatacgcttt taaggttgga aaaagtcctc gatttttccg
    10801 atttggaagt gcgcgacgcg atgattacgc gcagccgtat gaacgtttta aaagaaaacg
    10861 acagcatcga acgcatcacc gcctacgtta tcgataccgc ccattcgcgc ttccccgtca
    10921 tcggtgaaga caaagacgaa gttttgggta ttttgcacgc caaagacctg ctcaaatata
    10981 tgttcaaccc cgagcagttc cacctcaaat cgatattgcg ccctgccgtc ttcgtccccg
    11041 aaggcaaatc gctgaccgcc cttttaaaag agttccgcga acagcgcaac catatggcga
    11101 tcgtcatcga cgaatacggc ggcacgtcgg gtttggtcac ctttgaagac atcatcgagc
    11161 aaatcgtcgg cgaaatcgaa gacgagtttg acgaagacga tagcgccgac aatatccacg
    11221 ccgtttcttc cgaacgctgg cgcatccatg cagctaccga aatcgaagac atcaacacct
    11281 tcttcggcac ggaatacagc agcgaagaag ccgacaccat tggcggcctg gtcattcaag
    11341 agttgggaca tctgcccgtg cgcggcgaaa aagtccttat cggcggtttg cagttcaccg
    11401 tcgcacgcgc cgacaaccgc cgcctgcata cgctgatggc gacccgcgtg aagtaagcac
    11461 cgccgtttct gcacagttta ggatgacggt acgggcgttt tctgtttcaa tccgccccat
    11521 ccgccaaaca taaaaatgcc gtctgaaacc gttgcaagtt tcagacggca tttcgcttat
    11581 ccgcttattt tttgctcaaa gtcagccccg tccaaccgaa taacagggtc aaagccaaac
    11641 tcaaatagca gaaaaaggca tacggcagat attcccaaac cggcacgccc agcgcgtggc
    11701 tgatgaacac gccgcatacg ctccacggta cgagcgggtt aatcaccgtc cccgcatctt
    11761 ccagcgtccg cgacagattg cgggaatgta gtccgagcct gtcgtaaacg ggtttaaacg
    11821 tttctccaga aagcaggatg ctcaaatatt gttcgccaat caggaaatta accccgaccg
    11881 aagtcatggc aacgctgaac gtcgcgcgtc cggcattcgt caagaaggta cggatggcct
    11941 ccaacaggga aggaatcaca ccgagcgcaa acaacagtcc gcccaaactc atcccgagaa
    12001 tcacgatggt ttgcgtgaaa aacatacttt ccaaaccgcc gcgcgaaatc agtttgacaa
    12061 catctttaaa cgcttcgcct tcgagtttgt agccgccgta aaaccacgca ccgagctgac
    12121 gcagatcggg cgtgctgtgc agatacgtta cagcaacggc aaccatgacg gtaaagagca
    12181 tggcgacgac ggcgttgatg cgcatcaatg ccaaaatgac caacagcgca aacggaatca
    12241 gcgaatagcc gtgcaccaat cccgtggctt caagctggct gcggaaggat tcgacgctgt
    12301 tcaaatcctg cgcggcgaca ttcggcaaaa gccaaagcat cagtgccgca ctaatgagcc
    12361 acgcggggat ggtggtgtac atcatatttt tgatgtgctc aaacaagtcg atgccgacga
    12421 tggacgcgga aatacccgtc gtatccgaaa gcggggacat tttgtcgcca aaaaatgcgc
    12481 ccgaaacaat cgcgcccgcc gtcatcgcca tatcggcctg aaacgccgcc gccatcccca
    12541 taaaggcaac gccgacagtg gcgcaggtgg tcaggctgct gccgatggac acgccgatga
    12601 cggaacacag cgcgaaggcg gaaaaataaa aataagtcgg agaaatcagc ccgaaaccgt
    12661 aatacatcag cgtcggaatc gcaccgctca tcatcagtgc gctgaccatc agcccgatga
    12721 agaaaaacag gtaaatcgcg cccataccct gattcaacgc gcctatcatg ccctgctgca
    12781 tatcgttgta tttcaaaccg cgcgccaagc cgtacaaaat cagcacgacg atggcggcaa
    12841 taatggacat atgcggcagc cactccaatg aaatgatggt atagcccatc gcggcaatca
    12901 gagcgacgac gacggcaagt gcctcaccgc gcggcatatc gagtaaggat ttgaaagcaa
    12961 acatgattct ttgcccgatt tgatataaag ttaacggatt ctaacacact ataccgaatc
    13021 cgcccgacgt tttcagacgg cattttagcg ttttacaaaa gccggacaga aacaaaacgg
    13081 caattttctc aatttaaatt aatttttttg aaatataatt ttttattttt ttgtttgttg
    13141 gcatataaga cttttatgga ttgaaatatt aaaacctcgg cacacacgcc gcaaacaccg
    13201 gtacgcaaaa atgccgtctg aaagatgttc agacgacatt tctcaagaaa aagattattt
    13261 gtccgcccta tatccgtaca ccgcaaaaaa cacgatatac agataacaga tgacggaaac
    13321 gacaaacgaa gacatcaggg tgtaagtatc tgccacccag ccctgcacga caggaacgac
    13381 cgcaccgccg acaatcgcgg tacacagtac accggaagcc gcgttggtaa attttcccaa
    13441 tcctttggtt gccaaagaga aaatcgtcgg gaacataatc gagttgaaaa aaccgatggc
    13501 aagcagcgac cacatcgcca catccgcatt gccgctaccc gtcgccatcg cgatggcaag
    13561 cagtacgacc gcagccgatg cgttaaacgc caaataacgg ttgggcgcga atttcgccat
    13621 caccgccgaa ccgaggaaac gtccgaccat cgcgccgccc caatagaacg acaggtaatg
    13681 cgcggcagaa gcatgatcca gccctttcag ataacccaat acgttgacca tcaacgaacc
    13741 gatagacacc tccgcgccga catagcagaa aatgcctgcc gtaccgaaca cgagatgttt
    13801 gtattgccat acgccggttt tgccgtcgtg gttgtgcgcg ctttcctcgg cggcaatttt
    13861 gcgcgcgtcg ggcagccgga tcattttcac gaaaacggca aggataatca gcagccccgc
    13921 cagtcccaaa tagggaatct gtacggaaga aatctgttcc gccttgctga cggtttgggt
    13981 tgcgtccgcc aaaatcagga acgcgccgat ttgcggcgca atggtcgtac ccaaagcgtt
    14041 aaacgcctga accagcgtca gtgttgccga ttccttgccg ggtttcgcca gcagggtaac
    14101 ataaggatta ccggcaacct gaagcagcgt tacgccggaa gccaaaataa acaacgcgcc
    14161 caaaaatacc gcgtaagaat ggctgcccgc agcaggataa aacagcaggc atccgaccgc
    14221 cgtcagcaga aagccgccga taacgccgtt tttgtagccg actttgccga caaaagcccc
    14281 catcgggatg gacatcaccg cataggcggt aaagaaacag aattggatca gcatcgcctg
    14341 aacgtaagac aggtcgaaaa tttctttcaa atgagggata aggatgtcgt tcatgcaggt
    14401 aataaaaccc atcatgaaga acagcgtggt caagacgacc aatggggacg tatgattgtt
    14461 ttgtgattgc gcagacatga tttgcctttc gtggtgtcgg aatattaccc gtttcaagaa
    14521 aatagaaatt gacatttctt aacggcaatg caaatcatac tgatatttga acattttgca
    14581 aactttatcg gatgcaggca atgcgccgat ctgaaattca agcagcagaa attaatattt
    14641 tacagttgct tgcatagatt ttaatagatt ttaaaaaatt ccggcggact tgcaaaaacc
    14701 gttcccaata aaatgaaaat ccgccgccgt atccggaaaa ttcggaaatg ccgcatcgtg
    14761 gcatcaaaac cggagcggaa agaatgtcgt atgcccgaca aaaaaggggc atacggctgt
    14821 gccgtatttt ttgcaccgtc ctccgccctt cggcgggggc gtgaaaatat agtggattaa
    14881 caaaaatcag gacaaggcga cg
//
LOCUS       DAXHKG010000042        14718 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.042, whole genome shotgun sequence.
ACCESSION   DAXHKG010000042 DAXHKG010000000
VERSION     DAXHKG010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14718
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.042"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(24..644)
                     /gene="galE"
                     /locus_tag="ACFMWP_000976"
                     /pseudo
     CDS             complement(24..644)
                     /gene="galE"
                     /locus_tag="ACFMWP_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(723..1067)
                     /locus_tag="ACFMWP_000977"
     CDS             complement(723..1067)
                     /locus_tag="ACFMWP_000977"
                     /inference="COORDINATES: protein motif:HMM:NF014177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFC5891599.1"
                     /translation="MNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDGAMIFSGSPHAGFMSQRYAEK
                     FYFHDEYQQLDL"
     gene            complement(1060..2058)
                     /locus_tag="ACFMWP_000978"
     CDS             complement(1060..2058)
                     /locus_tag="ACFMWP_000978"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC5891600.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(2089..4362)
                     /locus_tag="ACFMWP_000979"
     CDS             complement(2089..4362)
                     /locus_tag="ACFMWP_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HFC5891601.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDGLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETESEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(4427..5077)
                     /locus_tag="ACFMWP_000980"
     CDS             complement(4427..5077)
                     /locus_tag="ACFMWP_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC5891602.1"
                     /translation="MISVEHVSKQYQMRGGMRTVLDDINFSLQKGEKVGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(5074..5871)
                     /locus_tag="ACFMWP_000981"
     CDS             complement(5074..5871)
                     /locus_tag="ACFMWP_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC5891603.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(5871..7034)
                     /gene="ctrB"
                     /locus_tag="ACFMWP_000982"
     CDS             complement(5871..7034)
                     /gene="ctrB"
                     /locus_tag="ACFMWP_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HFC5891604.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(7049..8224)
                     /gene="ctrA"
                     /locus_tag="ACFMWP_000983"
     CDS             complement(7049..8224)
                     /gene="ctrA"
                     /locus_tag="ACFMWP_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HFC5891605.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            8359..9492
                     /gene="neuC"
                     /locus_tag="ACFMWP_000984"
     CDS             8359..9492
                     /gene="neuC"
                     /locus_tag="ACFMWP_000984"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0006047 - UDP-N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HFC5891606.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTCKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALEVSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            9496..10182
                     /gene="neuA"
                     /locus_tag="ACFMWP_000985"
     CDS             9496..10182
                     /gene="neuA"
                     /locus_tag="ACFMWP_000985"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HFC5891607.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            10183..11232
                     /gene="siaC"
                     /locus_tag="ACFMWP_000986"
     CDS             10183..11232
                     /gene="siaC"
                     /locus_tag="ACFMWP_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HFC5891608.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            11384..14497
                     /locus_tag="ACFMWP_000987"
     CDS             11384..14497
                     /locus_tag="ACFMWP_000987"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5891609.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLYPPFHLHPNVKTSSIIDLFNDIPENVSCRNTPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSAEDSIIFTHPLQLEMYRLANNDIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDNEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSESEGFPYIFMEGMVYDIPIVVYDFKYGAND
                     YSNYNENGCVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKSSLVTINKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKSPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
BASE COUNT         4370 a         3312 c         2922 g         4114 t
ORIGIN      
        1 gtttttttgt ttgcggtttg catttaatcc ccatatccgt tggggttgcg gctgacccaa
       61 cgccacgaat cttccatcat ttgctgcaag ccgcgtttgg tttcccagcc ggtttgttgt
      121 ttggtatggg acgggtcggc aaaggaacac gccaaatcac cggcgcggcg cggtttgatt
      181 tcaaatggaa tggttaaacc cgaagccgct tcaaatgcgc ggatgatttc caataccgaa
      241 gaagcgcggc cggagcctaa gttcagcaaa tgcgtgcctg ctacattact ttttgcctgc
      301 atagccgcga catggccttc tgccaaatcc atcacatgaa tatagtcacg catccccgtg
      361 ccgtcggggg tagggtagtc atcgccaaat accgccaatt gcggcagttt gcctgccgcc
      421 acttggcaga tataaggcaa caaattattc gggatgccgt ttggctgctc gccaatcaaa
      481 ccactttcgt gcgccccaat cgggttgaaa tagcgcaaca aaatcacgct ccaacgcgga
      541 tcggcctttt ggatgtcggt taacatccgt tccaccatcg ctttggatgc gccataagga
      601 ttagcggtat cgcccgggcg catatcttcc gtatagggca ttttacgtat catggcgcga
      661 cgcattaaag taaacgccaa agcgcgttta tactggttat ccagtttccc tatattttta
      721 cgttacaaat caagttgttg gtattcatcg tgaaaataga atttttcggc ataacgctga
      781 ctcataaaac cggcatgcgg gctacctgaa aaaatcattg cgccatcatc gtcatttaat
      841 gtttcatggt tgttttctat taatgctaaa gcaatttggt aattaattgc caaaatatcg
      901 ttagtaatca cacgatagcc gcgttttttg gcttcatagg caaaggaaca gcctccacta
      961 aatacatctg caactgtatc tacatcagac ggaagctggt cacaaatcca ggaagctatt
     1021 ttctctttat taccgatata gttaattttc ggatattgct tattcatttt cactcatttt
     1081 taaaatactt tcagcaatag cttttgccaa taaaggcggt acggcgttac caacctgctg
     1141 ctgggcaatt ttgctgccgc aaaaaataaa attatcaggg aaagattgta aggcagctaa
     1201 ttcacgaacg gttaaagccc gattctgttc atagtgaaaa actttgcgca tatctcctgt
     1261 aatacaaacg gctggtttgt tgctgttgta acggatgtat ttacggatat cacctgtttt
     1321 cggacgtaat ggttcaggaa tatcgttacg gttacctcca tttttaacaa atgccatttt
     1381 ttctaacatt tgtgccgaat gattcatagc ttcatgattt gcaacgtgtg gattgctttc
     1441 gccagcagcc agttttggaa aatgtcctat tgctgatcca acagtctgat gggaaatctg
     1501 caaaggttcg ggaaaggaaa ttttgccttt atccctcctc ccgataaata tcactcggct
     1561 acgtatctga ggaacaccga aatcggctgc actcagtatc ttacattcca ccgaataacc
     1621 gatattctga aatgcttgaa taatctcaat acgtgtttta cctgaattgt gtgtatagag
     1681 tcgcgctaca ttttccataa caaaaaaata tggttggaca attttaacta ttcggacaaa
     1741 ctctttaaat aaatggttgc gtgggtcatc tgtaaatgtc cgtccaatct ttcctgccat
     1801 actaaaacct tgacaaggtg gtcctccaat aatcaaatca actgcttgtc cgttaagaca
     1861 attgattaaa tcttgttcgg ttagtgtggt taaatctttt tgcagtaatt gatgatgggg
     1921 gaagttggta cggtaagtct gacaataatc agactccatt tcaacagaaa gcaattgttg
     1981 gaatccggct tgttcaaaac ccaaggatag gcctcctgct cctgagaaaa ggtcaatata
     2041 ggtaagtggt gtgtgcataa gtcaaaatcc ataaactctt cgattatttt accgcttcag
     2101 cttcgcaaac gcatccgcca tcgccgaatt ggctggggcg cggtcgttgc gttggggttt
     2161 gcggccggct gtccgttcgc ggctgcggtt ttcagacggc attttatgtt ttgcgccgcc
     2221 cggttcgtca tccaagcgca tggtcagcgc gatgcgtttg cgtgcagcat cgacttccag
     2281 cactttcact ttcaccacgt cgccagcttt caccacttcg cgcgggtctt ggacgaactt
     2341 gttggacagg gcggagatgt gcaccaagcc gtcctgatgg acgccgatgt ccacgaacgc
     2401 gccgaagttg gcgacgttgg aaaccacgcc ttcgagtatc ataccgactt gcaagtcgct
     2461 gatttcgtgg ataccttcgg caaacgatgc cgtctgaaac tcgccgcgcg gatcacggcc
     2521 gggtttttcc agttcggaca ggatgtccaa aatggtcggc aggccgaagc gttcgtcggt
     2581 gaagtcggac gctttgattt gcttcacgcg ctcgcggttg ccgatgagtt cggcggcgct
     2641 aatgccttgt tgcgccagca ttttggcgac gacgggatag gcttcggggt ggacggcgct
     2701 cgcgtccaac ggctctttac cgccgttaat ccgcaaaaag cctgccgcct gctcgaaggt
     2761 tttttcgccc aaacgcggta ctttcagcaa ttttttgcgg ctgtcgaacg cgccgttttc
     2821 atcgcggtag gcaacgatgt tttgggcaag ggtttgattc aaaccggaaa ttcgcgccaa
     2881 gagcggggcg gaggcggtgt tcacgtccac gccgacggcg ttcacgcagt cttcgaccac
     2941 cgcgtccagc gatttggcga gctggctttg gttcacgtcg tgctgatact gccccacgcc
     3001 gatggatttg gggtcgattt tgaccaactc ggcaagcggg tcttgtagcc tgcgggcgat
     3061 ggacaccgcg ccgcgcaggg aaacgtccaa gtcggggaac tcgcgcgccg ccagttcgga
     3121 cgcggaataa atcgacgcgc cggcttcgga cacgacgatt ttatgcagcc ccattttcga
     3181 catttcacgc accagttcgc ccgcgatttt gtcggtttca cggctggcgg tgccgttacc
     3241 gatggcgatg agcttcacgc cgtgctgttt aatcaggcgc gacagcgttg ccaacatatt
     3301 gttttcttga tgcaaataga cgatgacggt atccagcagc ttgccggtgt cgtccaccac
     3361 ggcgcatttc acgccgttgc ggtagccggg gtcgagaccc agcgtggtca gccgtccggc
     3421 gggcgcagca agcagcaagt ctttgagatt gcgggcgaac acggtaatcg cgtcggtgtc
     3481 ggcggcttct ttcaaacgat tgagagcttc aagttccaac gacaaaaaga ttttcgcgcg
     3541 ccaagtcagg cgcacggtgt cgcgcagcca tttgtggccg tctgaaactt tgaagcggcg
     3601 ggcgatgatt tgctcgtatt cgctttgctg cgtaatcggc gtgtcgtcgg gctgatattt
     3661 gagcgcgatg ttcaacacgc cttcgttgcg tccgcgcaaa accgctagcg cacgatggct
     3721 gggcatcgca cgaataggtt cgcggtggtc aaaataatcg ctgaattttt cgctttcggt
     3781 ttctttgcct ccaacaactt gcgcgtggat ttcggcttcg ttccacagct tgtcgcgcag
     3841 cgtgccgatg agttccgcgt cttcggcaaa ctgctccatc agaatcgcac gcgcgccgtc
     3901 caacgcggct ttggcatcgg ggacgttttc gttcaggtag ccttgtgcgg cggcttccac
     3961 gtcctgcgac tgctcggcaa gcaacacgtc cgccagcggc tgcaaaccgt gttcgcgcgc
     4021 aatttgcgcc ttggtgcggc gtttgggctt gtagggcaga tacaggtctt ccagcgcggt
     4081 tttgttgtcg gcggcttcga tttgcgcgcg gaggccgtct gaaagtttgc cttgctcttc
     4141 aatgcttttt aacacaacgg ctttgcgctc ttccaactcg cgcaggtatt gcagccgctc
     4201 ggcaagccgg cgcagctgcg tgtcgtccag cccgccggtg gcttctttac ggtaacgcgc
     4261 gataaacggc acggttgcgc cgtcgtctaa aagctcaata gcggcattga tttgcgcggt
     4321 agtcgcggaa agttcttggg aaagaatttg agtaatgttc atcaatagaa ttccaacgga
     4381 caggccgtct gaaatttcag acggcctgat ttaaaaaaca atcgctttaa ggcagcgaat
     4441 tataatattc gtaggctttg tccatatctt caaactggtg catatgccct ttttccagca
     4501 ccatcgcatt atcgcaatat tgcttcatgg cgctgtggct gtgcgacacc aagatgatgg
     4561 aacggtcttt gcgcttttca aacaactcgt acttacattt atcggcaaag cgcgagtcac
     4621 caactgcaat cacttcgtca atcaaatagc aatcaaactc taccgccaac gacaaagcaa
     4681 atgccaaacg cgccttcata cctgaagaat aacgcttgac cggctcgtaa agatattgcc
     4741 ccaactcgga aaactcttcg gtaaagttct tcacataatc gatatcgaca ttgtaaatcc
     4801 ggcagatgaa acgcaaattg tccataccgg tcagactacc ttgaaacgca ccggagaatg
     4861 ccaaaggcca agaaatactc attgtccgct tgatttcacc cgtggtcggc ggctcgacac
     4921 cactaatcaa acggatcaac gtcgatttac ctgcaccgtt tcgacccaaa ataccaactt
     4981 tctcaccctt ttgcagcgaa aaattgatat cgtctaacac cgtccgcata ccgccgcgca
     5041 tttgatactg cttggaaaca tgttcaaccg aaatcattgc ggctcgactc ctttactgaa
     5101 tttactgacc atcgccaagc caaacaacaa caacaccaga ttgcacaata cgatatacca
     5161 aggattttca taggtaatta catcgctgcc aaaatatccg gcacggaaca tttctgtgcc
     5221 atgcaccatc ggaatcatta atgcatattc ttgtaccttg ggcggcaaat tatgcacaaa
     5281 aaagaacgca ccggataacg gcatcatcac aaaagtcaat gtgccccaaa tcttgccaaa
     5341 cggctcgaaa ttaaaggcaa tcgaacaaat caccaaaccc aaaccaatcg caaaaaaagc
     5401 catcaaaagc caagccatca gcatataaaa catatctgcc ggcatttcaa tccagccaat
     5461 cgcaatcaat accgccataa tcacaatctg cgcaatggtt gcaccagcaa tttccaaaat
     5521 catgcgcgcc aagatggtat ccaaaactct tacattgcgg tgataaagca agctggcatt
     5581 tgaagaaatc gacccaactg cccgttttga ggcattacgc cacatcatca acatcggata
     5641 gccagtaatc gcaaatgcga caatattcaa agttgaatat cggtctgccc ttaaaaattt
     5701 ccacatcaag acgataacga atgtcatcag caacggctca acaaacagcc ataaaaagcc
     5761 aatattattg cgaccgtaac gggtgataat ttcccgcatc aacagcgcac cgattacgcg
     5821 cctttgaatg gctaaagatt cccaaaatga tgttttatgc aaggctttca tcagttttta
     5881 tgctcacgaa tgctggcagt caacaggctc aaaataccat aaaccatcaa gccgataatc
     5941 agagtggcaa caatgttgta taaccgttta ggctcatgtg ccaaatccgg caggctcggt
     6001 tgcgagatca cttccaaata aagctgctga cggtctgctt caaccttggc actttccaaa
     6061 gaagtcatgg cggctgccaa ctgctgctct gccaactggt tttccaaata cacacgctga
     6121 tattcggcag cctgattaga caacgaagaa tgcccaccgc ccgaaatggc acgtaactgt
     6181 tggtcaattt ctttacgcaa gctctgctca cgcgcctgca aacccggaat ctgcggattc
     6241 tccggagtga ctgctttcac ctgatccagc tgggtttgaa tcacaatcaa ttcatcttgc
     6301 agcttggaaa ccaaccccat ttgcacttcc gattgcgctt tcaaatcaaa aacgccattg
     6361 gcaatccggt aatccgtcag attctgagag gcttccttta cccgctctgc cgccgttttc
     6421 actacttctt ccgcatagcg caccgtatca gcacgtgcac gatcgttcaa ctggttaatc
     6481 aatgcttcac cttgttttaa caaagcctca ttgattttct tagattccag cgcatcaaag
     6541 gaagttacat tcaacgtgga aatacccgaa accgtatcaa aattgatcat cacctgattt
     6601 ttatagtatt gataaaaagc ctcttcctcg ccacggaacc caaacccatt aaagcggctg
     6661 aacgcatcac ctttggtttc ataaaactca cgcaccggca agattttacg cagttcatcc
     6721 aaagacgagc gcgaacgcat atactcccca accgtgtaaa tatcatcttg cgcacgggca
     6781 aaacctgtgc cctgcaaaat ggcacccagg ccattgagag aagattggct tttaggcgag
     6841 cgcaccacaa agctcgattg cgacgtaaaa cgatcggaag cgaagaagcc gaaatacacc
     6901 aacgaaatta ccgtagggat aatcaccgtt acccaaaata aagggcttag ctttttaatc
     6961 caacttttct ttttcggctt tttacgctcg gctttggttt cagtggcaac tgccacagga
     7021 agttgctcag acatcttact tactcacatt aattagttaa attattaata ctgttcgcgc
     7081 cactggtaac cggcgagaac acaaacgaca aaaatttctg cacttcagcc aacggcgcat
     7141 tcgacacata caatacatct ttattcttca caggaaagcg ctgcatagaa aatagcgaat
     7201 gcgcatcagc catattcaca cgatataccg ttggaatctc tgcctcactg ccataacctt
     7261 gagcaatcca tttatcctga cgttctgccg gcaattccac caatggcgta tagcggaaca
     7321 caaacacacc acgcgcatca gaacggcgat cttgcaaacc gcccatacgg ccaatggctt
     7381 cagaaagcga taagcctctg gctgaaaaac cgatttcttg tgttctcccc accgcaccca
     7441 tagacgtaaa ggtataggga ttggtaatca tggtaaccac atcaccgcga cgcagcaaaa
     7501 tattttgtcg cggatttgca actaaatctt ccaaggcaac agttcgtact acattgccac
     7561 gtgtcagctg cacattcgta tcctgcacat ttgccgttga accacctacc gcagccaccg
     7621 catccaacac acgctcaccg gctgccgtca gcggcatacg cacactattc ccagcacgaa
     7681 tcaccgacac attcgccgca ttattctgca ccaaacgcac catcacttgt ggctgattgg
     7741 ccattttttt caggcggcct ttaataattt cctgaacctg accaggcgtt ttaccgacca
     7801 ccgaaatatc gccaacaaac ggcacagaaa ccgtaccacg tgccgtgacc aactgctctg
     7861 gcaacttagt ttgatgcgca ctacccgagc ccatcgaaga aaggccacca ccaaacaata
     7921 ctgccggcgg cgcttcccaa atcataatat ccaatacatc accaatattt agcgtaccag
     7981 ccgaagcata accatcgcca aactgagtga atgactgatt tatctgagcc ttatataata
     8041 actgagcaac cgtatgattc acatcaatca gctccacttc aggaatttga acttcagatt
     8101 gttgccctaa agagacaatt ttttttgcgc tggggcctga tgaaggaatc gcagagcatc
     8161 ctacaattaa acttccacac aataataata ctgcgtgacg aatataaaat ttcactttaa
     8221 acacaagcca aatcctaata taattataaa tggcctaatt atagcactta atcgaaataa
     8281 atttatgagt acgtagagta taattagtat tcttctttcc aacttcctta tacttatata
     8341 cttatagatt ctaaaatcat gaaaagaatt ctttgcatta caggtaccag agccgacttc
     8401 ggcaagctaa aacctttatt agcctatatt gaaaatcacc cagaccttga attgcatttg
     8461 attgtaactg gtatgcatat gatgaaaaca tatggcagaa cctgcaagga agtaactcga
     8521 gaaaactatc aacatacata tctgttttca aatcaaatcc aaggtgaacc aatgggtgcc
     8581 gttttaggca ataccattac gtttatctct cgtctatctg atgaaattga acctgatatg
     8641 gtcatgattc acggcgaccg tttagaagca ctagcaggcg caactgtagg tgcattaagc
     8701 agccgtttag tttgccatat cgaaggtggt gaactatctg gtacagtaga tgactccatt
     8761 cgtcattcta ttagtaaact ttctcatatc cacttggtag caaatgaaca agctgtcact
     8821 cgcctagtgc aaatgggaga aaaaagaaag catattcaca tcatcggctc ccccgattta
     8881 gatgttatgg cctcttccac cctcccatcc ttagaagaag tcaaagaata ttacggttta
     8941 ccatacgaaa attatggtat ttctatgttt caccccgtga ctacagaagc acatttaatg
     9001 ccacaatatg cggcccaata tttcaaagca ttagaagtaa gtggccaaaa tatcattagc
     9061 atctacccta ataatgacac tggcactgaa agtattctgc aagaattatt aaaatatcaa
     9121 tctgataaat ttattgcatt tccttccatt cgatttgaat actttttagt cttattgaaa
     9181 catgctaaat ttatggtcgg caactcaagt gcaggtatta gagaagctcc tctctacggt
     9241 gtcccttcaa ttgatgttgg tacacgccaa agtaaccgcc atatgggaaa atctattatt
     9301 catacagatt atgaaactaa aaatatcttt gatgcgattc aacaagcatg cagtttaggc
     9361 aaatttgaag cagatgatac ctttaatggc ggagatactc gcaccagcac agaaagattt
     9421 gctgaagtaa tcaacaatcc tgaaacgtgg aatgtttctg ctcaaaaacg ttttatcgat
     9481 ttgaatcttt aaattatgga aaaacaaaat attgcggtta tacttgcgcg ccaaaactcc
     9541 aaaggattgc cattaaaaaa tctccggaaa atgaatggca tatcattact tggtcataca
     9601 attaatgctg ctatatcatc aaagtgtttt gaccgcataa ttgtttcgac tgatggcggg
     9661 ttaattgcag aagaagctaa aaatttcggt gtcgaagtcg tcctacgccc tgcagagctg
     9721 gcctccgata cagccagctc tatttcaggt gtaatacatg ctttagaaac aattggcagt
     9781 aattccggca cagtaaccct attacaacca accagtccat tacgcacagg ggctcatatt
     9841 cgtgaagctt tttctctatt tgatgagaaa ataaaaggat ccgttgtctc tgcatgccca
     9901 atggagcatc atccactaaa aaccctgctt caaatcaata atggcgaata tgcccccatg
     9961 cgccatctaa gcgatttgga gcagcctcgc caacaattac ctcaggcatt taggcctaat
    10021 ggtgcaattt acattaatga tactgcttca ctaattgcaa ataattgttt ttttatcgcc
    10081 ccaaccaaac tttatattat gtctcatcaa gactctatcg atattgatac tgagcttgat
    10141 ttacaacagg cagaaaacat tcttaatcac aaggaaagct aaatgcaaaa caacaacgaa
    10201 tttaaaattg gtaatcgttc agtaggttac aaccacgaac cattgattat ctgtgaaatc
    10261 ggcatcaatc atgaaggctc tttaaaaaca gcttttgaaa tggttgatgc tgcctataat
    10321 gcaggcgctg aagttgttaa acatcaaaca cacatcgttg aagacgaaat gtctgatgag
    10381 gccaaacaag tcattccagg caatgcagat gtctctattt atgaaattat ggaacgttgc
    10441 gccctgaatg aagaagatga gattaaatta aaagaatacg tagagagtaa gggtatgatt
    10501 tttatcagta ctcctttctc tcgtgcagct gctttacgat tacaacgtat ggatattcca
    10561 gcatataaaa tcggctctgg cgaatgtaat aactacccat taattaaact ggtggcctct
    10621 tttggtaagc ctattattct ctctaccggc atgaattcta ttgaaagcat caaaaagtcg
    10681 gtagaaatta ttcgagaagc aggggtacct tatgctttgc ttcactgtac caacatctac
    10741 ccaacccctt acgaagatgt tcgattgggt ggtatgaacg atttatctga agcctttcca
    10801 gacgcaatca ttggcctgtc tgaccatacc ttagataact atgcttgctt aggagcagta
    10861 gctttaggcg gttcgatttt agagcgtcac tttactgacc gcatggatcg cccaggtccg
    10921 gatattgtat gctctatgaa tccggatact tttaaagagc tcaagcaagg cgctcatgct
    10981 ttaaaattgg cacgcggcgg caaaaaagac acgattatcg cgggagaaaa gccaactaaa
    11041 gatttcgcct ttgcatctgt cgtagcagat aaagacatta aaaaaggaga actgttgtcc
    11101 ggagataacc tatgggttaa acgcccaggc aatggagact tcagcgtcaa cgaatatgaa
    11161 acattatttg gtaaggtcgc tgcttgcaat attcgcaaag gtgctcaaat caaaaaaact
    11221 gatattagtt aataataaaa tagattaagc tattcttaaa ttcagaatat tgcttatcta
    11281 tattaaaaat ttctaatttt taaggttctg attgaaatca gaaccttatt tcaactatta
    11341 ctttttactc ataatcgaat tatatacttt aggactttat aatatggctg ttattatatt
    11401 tgttaacgga attcgggctg taaatggcct tgttaaatca tctatcaata ctgcaaacgc
    11461 ttttgctgaa gaaggactgg atgttcattt aattaatttt gttggcaata ttactggagc
    11521 agagcattta taccccccat tccacttaca tcccaatgtc aaaacctcca gcatcataga
    11581 tttatttaat gacattccag aaaatgttag ctgccgaaat actccttttt attctattca
    11641 tcaacaattc ttcaaagctg aatatagtgc ccactataag catgttttga tgaaaattga
    11701 atctttatta tctgcagaag atagcattat cttcactcat cctcttcaac tggaaatgta
    11761 tcgtttagcg aataatgata tcaagtcaaa agccaaacta attgtacaaa ttcatggtaa
    11821 ttatatggaa gaaatccata actatgaaat tttggcacga aatatcgatt atgttgacta
    11881 tcttcaaacg gtatctgatg aaatgctgga agaaatgcat tcccatttca aaatcaaaaa
    11941 agacaaatta gtttttattc caaacatcac ttatcccatt tcattagaaa aaaaagaagc
    12001 tgatttcttt attaaggata atgaagacat cgataatgct cagaaattta aacgtatctc
    12061 tattgttggc agcattcagc caagaaaaaa ccaattggat gccattaaaa tcatcaataa
    12121 aattaaaaat gaaaattaca ttttacagat atatggcaaa tctattaata aagattactt
    12181 tgaattaatt aaaaaatata ttaaagacaa taagttacaa aaccgtatct tattcaaagg
    12241 tgaatcttcc gagcaggaaa tttatgaaaa tacagatatc ctgatcatga catcagaaag
    12301 tgagggattt ccatatatat ttatggaagg catggtgtat gatattccaa tcgttgtata
    12361 tgattttaaa tatggagcga atgattacag taactataat gaaaatggtt gtgtttttaa
    12421 aactggtgat atttctggaa tggcaaaaaa aataattgag ctattaaata acccagaaaa
    12481 atataaagaa ttagttcaat ataatcacaa tcgcttctta aaagaatatg caaaagatgt
    12541 ggttatggct aaatatttca ctattcttcc gcgcagcttt aataacgtat cattatcgtc
    12601 tgctttcagc cgaaaagaat tggacgaatt ccaaaatatt actttttcta ttgaagattc
    12661 taatgattta gctcatattt ggaatttcga gctaaccaat cctgcacaaa atatgaattt
    12721 ttttgcttta gttggcaagc gaaaatttcc aatggatgct catatccaag gaacacagtg
    12781 tacgattaag atagctcata aaaagacagg gaatttattg tcgcttttac taaaaaaacg
    12841 aaatcagttg aatttatcaa ggggatatac cttaattgca gaagataata gctatgaaaa
    12901 atatattgga gcaatatcta ataaaggtaa ctttgaaatt attgcaaata aaaagagctc
    12961 attagttact ataaacaaaa gtaccttaga gttgcatgag attccccatg aactacatca
    13021 gaataaatta ctgattgctt tacccaacat gcaaacgcct ctaaaaatta ctgatgataa
    13081 tttaatacct atccaagcct ccataaaatt agaaaagatt ggaaatactt attacccatg
    13141 tttcttgcca tctggcatat ttaataatat ctgcttagat tacggtgaag aatccaaaat
    13201 tattaatttt agtaaatatt cttataaata tatctatgac tcaattcgtc atattgagca
    13261 acatacagat atatcggata ttatcgtttg caatgtttat tcttgggaac ttattcgtgc
    13321 ctcagttatt gagagcctta tggaatttac cggaaaatgg gaaaaacact ttcagacttc
    13381 tcctaaaatt gattatcgat ttgatcatga aggtaagcgt tcgatggatg atgtcttttc
    13441 agaagaaaca tttattatgg aatttccgcg taaaaatggt atagataaga aaacagcagc
    13501 cttccaaaat ataccaaaca gtattgtaat ggagtatccg cagaccaatg gttacagtat
    13561 gcgcagtcat tcactgaaaa gtaatgtagt tgcggcaaaa cattttcttg aaaaattaaa
    13621 taaaattaag gtagatatta aatttaaaaa gcatgacctt gcaaacatca aaaaaatgaa
    13681 tcgaattatt tatgagcatt taggcattaa cataaatatc gaagcatttc taaaaccacg
    13741 attagaaaaa tttaagcgtg aagaaaaata ttttcatgat ttcttcaaaa gaaataattt
    13801 taaagaggta atttttccaa gcacttattg gaatccaggt attatttgtg ctgcacataa
    13861 acaaggtatt aaggtatctg atattcaata tgctgccatt actccttatc atcctgcgta
    13921 ttttaaatca ccaaaatcac attacgttgc tgataaattg ttcttatggt ctgaatattg
    13981 gaatcatgag cttttaccaa atccaacacg agagattggt tctggtgccg catattggta
    14041 tgcattagat gatgtgagat tttcagaaaa actgaattat gactatatct ttctatctca
    14101 aagtaggatt tcttcgcgct tgcttagttt tgcaattgag tttgcattaa aaaatcctca
    14161 actacagctt ttattttcta agcatccaga tgaaaatata gatttaaaga acagaattat
    14221 tcctgataat cttataatct ccacggaatc ttctatacaa ggcatcaatg aatctcgcgt
    14281 tgctgtaggt gtttattcaa ctagcttatt tgaggcatta gcatgcggca aacaaacttt
    14341 tgttgttaaa tatccgggat atgaaattat gtcaaatgaa atagattcag ggttattctt
    14401 tgcagtagaa acacctgaag aaatgcttga gaaaacaagc ccgaattggg tggctgtggc
    14461 agatattgaa aaccagtttt ttggccaaga aaaataattt ttaagttaat ctttaaaagt
    14521 gcaatatttt tcttatttta aatattgcac tttattcttt taatcatagg aactcacatg
    14581 tattctgaac agggaattaa taatactatt aacatatcta ctacatcttt aaccaatgcc
    14641 acgcaactaa ctgtgatcgg gaataataac tctgtatata taggtaataa ttgtaaaatc
    14701 gtcagctcca atattaga
//
LOCUS       DAXHKG010000043        14674 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.043, whole genome shotgun sequence.
ACCESSION   DAXHKG010000043 DAXHKG010000000
VERSION     DAXHKG010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14674
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.043"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..339
                     /locus_tag="ACFMWP_000988"
     CDS             <1..339
                     /locus_tag="ACFMWP_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HFC5891610.1"
                     /translation="DASGLGEKIKDGKNQKTVLSREEEQKICNTFTHKQAVEDFSVVI
                     GYDEIKAKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIK
                     DRLAMLKFNS"
     gene            371..487
                     /locus_tag="ACFMWP_000989"
     CDS             371..487
                     /locus_tag="ACFMWP_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC5891611.1"
                     /translation="MPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYRK"
     gene            complement(647..1984)
                     /gene="ribBA"
                     /locus_tag="ACFMWP_000990"
     CDS             complement(647..1984)
                     /gene="ribBA"
                     /locus_tag="ACFMWP_000990"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HFC5891612.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPADIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHNLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPAADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILVGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            2093..2227
                     /locus_tag="ACFMWP_000991"
     CDS             2093..2227
                     /locus_tag="ACFMWP_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891613.1"
                     /translation="MPSEAGFVASDGIAAILAGRGLFVPTSRALLIWGLPEAYSEKNF
                     "
     gene            complement(2206..2862)
                     /locus_tag="ACFMWP_000992"
     CDS             complement(2206..2862)
                     /locus_tag="ACFMWP_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HFC5891614.1"
                     /translation="MILHPSSFNYRDIPKGADFSDNDFVRHFETLVEGRYYIANAWTK
                     IVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGGSISHNIK
                     YKNFSDVLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNIILIY
                     RKYFSFKEKCRKIFGAKAIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKFFSE
                     "
     gene            complement(2894..3220)
                     /locus_tag="ACFMWP_000993"
     CDS             complement(2894..3220)
                     /locus_tag="ACFMWP_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC5891615.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     RGGDSL"
     gene            complement(3388..3981)
                     /gene="ribA"
                     /locus_tag="ACFMWP_000994"
     CDS             complement(3388..3981)
                     /gene="ribA"
                     /locus_tag="ACFMWP_000994"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HFC5891616.1"
                     /translation="MSEMLNHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3974..4651)
                     /locus_tag="ACFMWP_000995"
     CDS             complement(3974..4651)
                     /locus_tag="ACFMWP_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891617.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVQSAAVYALMPSENQAFQ
                     LICLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECADEAAQAEWVALALALSEPLKLLLGMSAG
                     KDGSEDV"
     gene            4805..4889
                     /locus_tag="ACFMWP_000996"
     tRNA            4805..4889
                     /locus_tag="ACFMWP_000996"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4839..4841,aa:Leu,seq:tag)
     gene            5410..6444
                     /gene="purM"
                     /locus_tag="ACFMWP_000997"
     CDS             5410..6444
                     /gene="purM"
                     /locus_tag="ACFMWP_000997"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HFC5891618.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGELDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQDLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(6918..7574)
                     /locus_tag="ACFMWP_000998"
     CDS             complement(6918..7574)
                     /locus_tag="ACFMWP_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC5891619.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVLE
                     "
     gene            complement(7571..9343)
                     /locus_tag="ACFMWP_000999"
     CDS             complement(7571..9343)
                     /locus_tag="ACFMWP_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HFC5891620.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGESDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFSDGISLTGDDRTLLQTLIRQLGVSLASAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENISFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            9549..10163
                     /locus_tag="ACFMWP_001000"
     CDS             9549..10163
                     /locus_tag="ACFMWP_001000"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HFC5891621.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPGDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARPVRFEFDGHFADLNTQIDLQEG"
     gene            10326..10943
                     /locus_tag="ACFMWP_001001"
     CDS             10326..10943
                     /locus_tag="ACFMWP_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HFC5891622.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            10951..11814
                     /locus_tag="ACFMWP_001002"
                     /pseudo
     CDS             10951..11814
                     /locus_tag="ACFMWP_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(11827..12261)
                     /locus_tag="ACFMWP_001003"
     CDS             complement(11827..12261)
                     /locus_tag="ACFMWP_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HFC5891623.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            12407..13135
                     /gene="rpe"
                     /locus_tag="ACFMWP_001004"
     CDS             12407..13135
                     /gene="rpe"
                     /locus_tag="ACFMWP_001004"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HFC5891624.1"
                     /translation="MTAYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(13158..14189)
                     /gene="ruvB"
                     /locus_tag="ACFMWP_001005"
     CDS             complement(13158..14189)
                     /gene="ruvB"
                     /locus_tag="ACFMWP_001005"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HFC5891625.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(14271..14579)
                     /locus_tag="ACFMWP_001006"
     CDS             complement(14271..14579)
                     /locus_tag="ACFMWP_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891626.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
BASE COUNT         3476 a         3502 c         4091 g         3605 t
ORIGIN      
        1 gacgcatcgg gcttgggcga aaaaatcaaa gacggcaaaa accaaaaaac cgtactttct
       61 cgcgaagaag aacaaaaaat ctgcaatact ttcacgcaca aacaagcagt ggaagatttc
      121 agcgtggtga tcggctacga tgaaatcaaa gcgaagaatc acagcttgtc ggcggggcag
      181 tatttcgagg taaagattga ttatgtggat atttccgccg acgaatttgc gcaaaaaatg
      241 gcgggatttt cagcggattt ggataaactt ttcgccgaat ctgccgaatt ggaaaaagag
      301 attaaggata gattggcgat gttgaaattc aattcataaa taccgatgaa tgaaaccggt
      361 caaacttaaa atgccgtctg aaagcctttc agacggcatt ttgtttggtt tggaaaatac
      421 ttatgccgtt ctttccctga aagagagaat ccaaaaaacc aaagccacag gaatttatcg
      481 gaaatgacaa aaacccgacg aaccggattc ccgcctgcgc gggaatgacg aattagaagt
      541 tacccgaaat ttgcaaaaac aaaatccaac ccaacagacc gggttttcgt ttgcacggaa
      601 ataatgcaat aaataaagca aatataaagt atttgaattt actatattat ttttccgctt
      661 cttcaaagcc gacgacttcc aaaccgaagc cggtcagacc ggtgaaagat gagggctgcc
      721 cgaggacgcg cagttttttg acgttgaggc cgacgaggat ttgtgcgccg atgccgtagc
      781 ttttgctgtc ccatttgtag gcttggtttg cgcctttggg tagggtgcgg tcgagcaggg
      841 atgcgccgtc ttcggtgcgg tgcagaagga tgacgacgcc gctttctgcc tgttggacgc
      901 gctcgagtgc tttgggcaat gaccatgaat ggcgcgggtt ggcttgaatg aagtccatca
      961 cactgaaggg ttcgtggacg cggacgaggg tttcggtgtc ggcggcgggc gtgcctttga
     1021 cgagggcgag gtgggtttcg ccggagagtt tgtcgacgta aacgtgttgt tggaactcgc
     1081 cccacggggt ttgtacaggc gcattgccca tgtcttcgag caggctttcg gtacggctgc
     1141 ggtattcgat gaggtcggca atggtgccga ttttaaggtt gtgttcttcg gcaaacttca
     1201 tcagctcggg catacgcgcc atggtgccgt cgtcgttgat gatttcacag atgacggcgg
     1261 caggaatcag cccgttcatt tgcgccaagt cgacgccggc ttcggtgtgt ccggcgcgga
     1321 cgagtacgcc gcctttttgg gcgcgaagcg ggaagatatg accgggttgg acgatgtctg
     1381 cgggtttggc ggtcggggaa acggcggttt gaatagtcag ggcgcggtcg gcggcggaaa
     1441 tgccggtggt aatgccgtgt gcggcttcga tggagacggt aaagttggtg ccgtattgcg
     1501 cgccgttttt ttgggtcatc atcggcagcc cgagtttttc gaccatttcg ccgtccatcg
     1561 gcaggcagac caagccgcgc gcgtgtttga tcatgaagtt gatggcttcg ggcgtgacga
     1621 attgcgccgc catcagcagg tcgccttcgt tttctcggtc ttcggcatcg gtgatgatga
     1681 ccattttgcc ggctttgatg tcggcaagga tttcggggat gggggaaata tgggacatgg
     1741 tgtgttttcc tgtgtgttcg ggcgggcggg cggtgtgttc ggtatcgagc cagaaggcgg
     1801 gcatttttgc cgcctgttcg attttacggg cttttttctc gccgaaggat ttgtttttca
     1861 aaagggcgga gagttcgcct gtgttgaggg caacggcttc ggcaaaacgg gtttgcaaac
     1921 cgccgtagtg ttctgctatc cattgccgca ggttgcggcg gcgcagaccg gctgtgtcgg
     1981 tcatcgtttc atcctttgta gaaatcggat gtagcggatt gtaatcgcgt atttaccaaa
     2041 aagcaaatct gtttttttcg ccaaaccgaa ttatttgctt tttggtaaac agatgccgtc
     2101 tgaagccgga ttcgtggctt cagacggcat tgccgcaatc cttgccggcc gggggctgtt
     2161 tgtcccaact tcccgcgcac ttctgatttg gggtttgccg gaagcttatt ccgaaaaaaa
     2221 tttctgataa acggccttga ttgccgggta cagcataggc ggtacgagca ggcgcaatat
     2281 cggcaatcct atgatgaatg cggtcttccc gataaaaacc ggacggattg ccttcgcgcc
     2341 gaatatcttt ctgcattttt ctttaaatga aaaatatttc cggtagatga ggataatgtt
     2401 tttggaaaaa taaagcctta ccaatataga cctcagatag ccgatattgt cgaagacaaa
     2461 tttttgcaaa ccgccgtaga tgggggaatt tttgttttcg actaaaaaat ccacaccccg
     2521 gtcgagatgc gtcagcacat cgctgaaatt tttgtatttg atgttgtggc tgatagagcc
     2581 gccgagaacg cggtactggt aaaaagggtt atcgtaaaag gcaaaagtct tgataaaacg
     2641 cgccaattgc aaactgtacg ggaaatcctc gtgaatgtat ccttttggga aaaacagatt
     2701 gtttttgatg attatttccc gcctgacgat ttttgtccac gcgttggcga tatagtaccg
     2761 cccctccacc agcgtttcaa aatggcggac aaaatcatta tccgaaaagt ccgccccttt
     2821 ggggatgtcg cggtaattga aggacgaggg atgcaggatc aaatcaacct ttttgtctgc
     2881 aagttgttgt aaatcaaaga gaatcccccc cccgcgcgtt ttttgaacga ttggtgtcgg
     2941 cccaatagtc gtcgctgtcc aaaaagatta ggtaatcgcc ttttgccgcc cggataccgg
     3001 cgttgcgggc atccgacagc ccgccgtttt cttgatgaat cacttttata tgcggatatt
     3061 tgcctgcata ttcgtcgcaa atcttcccgc agccgtccgg cgaaccgtca tcgaccaaaa
     3121 tcatttcata atcggcaaaa ttttcggcaa gcacggaatc cacgcagcag cggaggtatt
     3181 tttccacatt gtaaataggg acgatgatgg agaaaatcat aaatatcaat ccattatatt
     3241 aagatgtttg cgcgtatgcc tcaaacccgc acccgcaatg cgtttgcatc cgcaccctgt
     3301 aactttataa aacttattgc tttatcaagg tatggaaacc tgtttcccga aaggcggcgc
     3361 aggatgcccg ttccctgcat ctttgcctta ttccgacatc agatgcccca gcttgtctgc
     3421 tttggtttgg aggtagcgtt tgttttcaag gttttccccg acgtgcaggg ggatgcgttc
     3481 gaccacgtta atccccgcat ctttcagggt ttggattttt tcggggttgt tggtcagcag
     3541 tttgaccgag cggatgccca gatattcgta gatagattgc gccaaacgga aatcgcgggc
     3601 atcgacgggc agcccgagtg ccaaattggc ttcaaccgta tccatacctt ggtcttgcag
     3661 atgataggcg cggattttgt taatcagccc gatgccgcgt ccttcctgac gcagatagac
     3721 gatgatgccg cgcccctctg tctgtaccgc cctcatggcc gcttcaagtt gaggtccgca
     3781 gtcgcatttt ctcgagaaca gcgcatcgcc cgtcaggcat tcggagtgga tgcgcgtcag
     3841 aaccggattg ccgtctgaaa aattaccgac ggtcagcgcg acgtgttcct gcccgtttgc
     3901 ctcttcaaag ccgtgcatcg taaatacgcc ccattcggtc ggcaggcggc aggatgccac
     3961 atggttcaac atttcagaca tcttcactcc catcttttcc ggcagacata cccaacagca
     4021 gtttcaaagg ttcggacaaa gccaaggcaa gagccaccca ttccgcctgc gctgcctcat
     4081 ccgcacactc tgcgcattca aattccacat gaaccacgcc caacacaccg ccactttccg
     4141 tgcagaccgg aatggaaatt tgcgccgccg aagcatgatt gcgttctccc gaaagctccc
     4201 ccaaatccaa ccaacggcgt acatccgagg caacattcat ccaaccgctt tgcgccgaac
     4261 ggcaagccag cgaaaccttg cctgccgctt catccaaatc ccacaggttt tccaaaacct
     4321 cgccctgtcg ggacaggcat atcagttgga aagcctggtt ttcagatggc atcaaggcat
     4381 agaccgccgc actctgcacg cctgtcgagc gcgaaaacac cgaatccaaa gccatgaaaa
     4441 gccgtttcag tgcatcttcg cggacattgt cgcacgacag gtaatcggca agtttccaac
     4501 cctcatcact gcgccacaaa accgaacggt ctatcgaagc cgtccccata tccattaccg
     4561 tctgcgccgt cagatacgcc gcccgaacct cgtcaagcgg cagcttcaaa ccctgagtca
     4621 gcagaaaatc cttaatcaaa gcagcaggca tacccaaatt ccgtcaataa aaacaaaaaa
     4681 ccgcccgatt ccgatgtcag gcggacgaaa aacagatttt accgccccaa accccaagcc
     4741 atcaacagcc ccgccgaaaa ccttgcacaa aaaaacaaaa tctgtataat cgtccaattc
     4801 ccatgcggac gtggcgaaat tggtagacgc accagattta ggttctggcg ccgagaggtg
     4861 tgagagttcg agtctctccg tccgcaccaa taatgataaa taaattatat agttaatgct
     4921 tatcgggaca aattagtgcc acaaaacata agtcgtctgc ttttcagcgg gcggcttttt
     4981 tatctgccta tatgtttcaa cacgcagaac ggtacataaa gtgccgccat ttgttccgca
     5041 ccgaatcgga aacgggtgct tccgcccgca atcagattca ccgcccctaa tgccggggtt
     5101 tcaaccggaa agaagaaaat attgattttg atgatggcat caaaaacccc cttccgctcg
     5161 tctgccaaaa ggaatggtta agaaaagcaa tgcgtcttta tgatggaacg cgatatataa
     5221 ggaattgagg gaaagggcag gcgggtttct gcccgttaat cctgcggacg gtcccgccaa
     5281 acccgacacg cgcgggcata tggcggactg tttacaatat tgtctaaaaa tctgaacctg
     5341 caaacgtgaa ataaggtaga atacgccccg ttattttacc gtccaatccc catttaccaa
     5401 ggaaaaacga tgagtacttc attgagttac cgcgatgcag gtgtcgatat cgacgcaggc
     5461 gaccaactgg tcgaaaacat caaaccgttt gccaaacgca ccatgcgtcc ggaagtattg
     5521 ggggatttgg gcggttttgg cgcattggtc gaaatcggca agaaatataa aaatcccgta
     5581 ttggtcagcg gtacggacgg cgtgggtacc aagctcaaac ttgcctttga ttgggataaa
     5641 cacgatacgg tgggcatcga ccttgttgca atgagtgtca acgatatttt ggttcaagga
     5701 gcagaacctc tgtttttctt ggattatttc gcctgcggcg aattggatgt tccgcgcgca
     5761 accgatgtca tcaaaggcat tgcacaaggt tgcgaagaat ccggctgcgc cctgattggc
     5821 ggggaaactg ccgaaatgcc gggtatgtat cccgtcggag aatacgattt ggcgggtttt
     5881 gccgtcggcg tagtggaaaa agagaatgtc attaccggcc gcagcatcgg cgcgggcgat
     5941 gtggtattgg gtttggcttc caacggcgca cattcaaacg gctattccct tatccgtaaa
     6001 atcatcgaac gcgacaatcc cgatttggat gccgagtttg ataatggcaa aaccttgcgt
     6061 gaggctgtta ttgcgccgac ccgtctgtat gtgaaaccga ttcttgccgc tttggaaaaa
     6121 tttaccatta aaggtatggc acacattacc ggcggcggca ttaccgaaaa cgtgccgcgc
     6181 gtgttgcctg aaaacacggt tgcacaaatc gatgctaaat cgtgggaatt gcccaagctc
     6241 ttccaatggc ttcaaaaggc gggcaatgtg gaaacccaag aaatgtaccg aacctttaac
     6301 tgcggcatcg gcatggtcgt tattgttgct gccgaagatg ccgatgcggt tcaggatctc
     6361 ttgggtgaac aaggtgaaac agtttaccgt ttaggtttga tccgtgagcg tcagggagac
     6421 gagcatcaaa cccaggttgc ctgattgctt ctatagcgaa atgccgtctc aaacatgggt
     6481 ttggacggca tttttatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac
     6541 agtacagata gtacggcaag gcgaggcaac gccgtactgg tttttgttaa tccactatat
     6601 attgattgat atgagggtgg gttacacatg cttaaacgat ataagccatt gtatatttat
     6661 gggattcgga atggaacatt ttaccccgca ttagtatttc cgctttttat tatgccgtct
     6721 gaaaatatca tgatgatacg ttttcagacg gcatagctga tattgcagta tcagataggg
     6781 gcaaacggaa aacactaaac cgaacaatat tactgctatg ccaagcgtac ttatgggggc
     6841 ataaacttac atgcttggtc tgttatccga atgaccgtac ggggattaaa acccctaata
     6901 tgccgtctga acccgcctta ttccagcacg ggttggggga cgttgtgccg gatggcgtaa
     6961 acagcggcct gcacccggct gctgaggttg agtttgcgga gcaggttttg aacgtggact
     7021 ttgacggtgg attcggcaag atcgaggtgg cgggcgatga ttttgttgct gtgtcctgcg
     7081 gcgagatagc ccaagatttc cagttcgcga ggggtaagtg aggagagtgc ctgtgtccct
     7141 tgggcaggtt ggggggaaat caggctttta acgagtttgg cggtcatctc gggcgagaat
     7201 acattatcgc cttcggcggc tttgcgtatg ctttcgagca gaaagtcagc gttgatgttt
     7261 ttcagcaggt aaccgcgcgc gccgatgcga atacattcgg tcaagtcgtc gctgtcttcg
     7321 gaaacggtca gcataatcac tgcctgctgc ggattgatgc tgatgatttg ggagagtgct
     7381 tcgcgtccgt tcatgccggg catatccaaa tcgagcagga cgacatcggg ttgcagccga
     7441 ctaatcattt tgatgcccga gaggccgtct gcggcttcgc cgatgacttc aaaaccgtgt
     7501 tggcgcgaca aaagggcttt aatgccgctg cggaagaggg tatggtcgtc tatcagaata
     7561 attttaatag tcatttcaag ctttcttcag atgcaaccgt caatgagacg gtggttccct
     7621 gttgagcttg ggaacggatt tctaaaacgg catggatgcg tttggcacgc tcctgcatga
     7681 tgtgcagtcc gacatggctg cccgtgggtt ctcctatttt ctccgtgtcg aaaccttgtc
     7741 cgttgtcttg gatggtcatg gtaaagcgtc cgccgtgttc ggaaagggtg aattttacat
     7801 gggtggcgcg ggcgtgtttg cggatgttgg acaggctttc ctgcaggata aaaatcattt
     7861 ggagctgcgc ttcctgaggc ggcaggaacg aaccgttttc ccaggcggtt tcgaccgtta
     7921 tcccggtttg ttgcgtaaag cgggcgaata ggtcggcaac ggcttcggga aattctttat
     7981 tgctgatttt ggtacggaag ttgagcagca gttcgcggac atcttcataa cattcctgca
     8041 cgcctgtttt gatgaagctg atgttttctg cggcttcctc ccgtttgttt tcggcaaagg
     8101 cggtttccag catctgtacc tgtaggttta ggaacgttaa tgcttgtgcg atgctgtcat
     8161 gtaatccttg cgcaatcagg ttgcgttcct gcaatactgc aagcaggcgt ttttcttctt
     8221 cctgcttcgc gctagcgagc gatacgccca attgccgaat cagggtttga agcagcgtgc
     8281 ggtcgtctcc ggtgagggaa atgccgtctg aaaagctgag caacagcctg cccaatgttt
     8341 cgttctggta ctcaatgggg aagatttcct catggtactt ccccaaatcc gaagctgctg
     8401 tgccgcaatc cgcatgatga atggaaacat aaacatcgga ttcgccgtcc aaacaaactc
     8461 tgccggaatc tgctcctacg gcgggcagga tacggtttag aaaatgttct gcagcctgtt
     8521 gcggtatgta ggattggtgc aggtcccgtg tagtttggta cagcagggtc aggttttgat
     8581 tttgtttttc gagactgcgt gtctgctcgg cgacttgtcc ttccaaatca tcatataaaa
     8641 ttttcaacct gccgcccatt tgattgaaac aacgcccgac ctgtttgaat tccggcgtac
     8701 cgccttcggg aaccggaata tcgaaacacc tccgtccgat gcgttccgca ccttccctta
     8761 acgcctgcag cggccggata acccaaatct ggtgccaaaa cagcatcagt acagacgaca
     8821 ccagcgtcat caacataatt gcccattgaa aacgcctgag ccaccatgtg tttttttcgt
     8881 tggcattttc caatgcctgc aaaaacagtt cgatgtttcc ggcaaagcgg tagagatcga
     8941 cctgagtcgg tcgccggtag gactggagcg gggggaggat gtgtgcctgc caatctataa
     9001 tcagcatgga ttgtatcaaa tcataagcaa gaggggtgtc cgaaggaatc agcggatgga
     9061 tggcatcact ttgtgaaata cgattcaggc ttttttcaaa ttcgtcaacc tgattgtcta
     9121 tttgggagcg gggagatcct tcacccgcca tgtatgccag acggtatgcc tgcattctca
     9181 agttgcccgc ctcttcgatg acggaggccg cgttttccag acgcaaagag agcagcagtg
     9241 tcaaaacgac agacaatgcc gccaacccga cccacactcc ggtcaggagt ttcaggcgta
     9301 gggaaaggct gatgccgtct gaaaaacggg ctggcagtat catgctcggc gaaaaattgt
     9361 tctaaataat gcaaacaata tcattctttg ggattagata caactgctca gaaagaattg
     9421 gttaaggaaa acataatccg taccgcttca gtgttaaatc atgttatgat aaaattcaga
     9481 taatatgaat ttatttgccg tctgcttcag acggcatttt gagtcattgg gaacggcaga
     9541 ctgcaatcat gaaaacctcg aacttttcca agagaacatc cgcaatgaaa acttttgccc
     9601 tgatactggc cgacggtcag gcgagccgta tgggaggcga ggacaagggg cttgctcttt
     9661 tggggggtaa ggcactgata gatcatgtca tcgacagggt caggccgcag gtcagccata
     9721 tcgccatcag caccaaccgg aatttggaag aatatgctcg aagaagtccg catatttttc
     9781 cggacgcacg gcagtggcag catttcggcc cgctttcggc attgtgtacc gcagccaacg
     9841 atttgcagtt ggcgactgcc gactggcttt tggttgtgcc gtgcgatatg ccgtatctgc
     9901 cgggcgattt ggtggcgagg tttgaaaccg tgtcgaaacg cacaccgttg tgcaatgcgt
     9961 attatgtgga aacgccgata acgatgcact acaacattat gtatatccgc ccgcagattc
    10021 tgcaaagcgc gattccctat ctgttttcgg gtatgaaaac attaagaagc tggttgcagc
    10081 agcaaagggc gcggccggtc agattcgagt ttgacgggca ttttgccgac ttgaacacgc
    10141 aaatcgattt gcaggaggga taagggcaag accgccgacc ggcgtggaaa ggaaaggtca
    10201 agccataccg ggcggttttt gcccgaatcg gaggcataat gctgtctgaa ggcatttcag
    10261 acggcatttt tcgcggggag atgctacaat ttgcaccatt tttaccgaca cagggaaaca
    10321 ggattatgtt tacaggcatt gttcaaggat tgggaaaact gacggcaatc caccgcccgt
    10381 cggaggcatt tcacacttat gtcgtcgagc ttccgcaaga ggcggcggac aatctgcaac
    10441 gcggcgcatc ggtcgccaat aacggctgct gcctgacgat taccgaaatc gaaggaaacc
    10501 gcgtcagttt cgatttaatg gcggaaactt tggcaaaaac caatttgggg ctgctgaagg
    10561 aaggcgattg cgtcaacatc gaacgggcgg cgcgtttcgg agacgaaatc ggcggacacg
    10621 tcatgagcgg acacattatg gcaaccgtgc ctattgtcga aatcgaacgg gacgggttca
    10681 accgcacggt ttggttttcg ctcccgcatg aactcaaacc ctatatcctg accaaagggt
    10741 tcgtcggctt ggacggttgc agcctgacca taggcaaagt cgaagacggc cgtttcaatg
    10801 tccatctgat tcccgaaact ttggaacgga cgctgttcgg cagcagaaag gtcggcgaca
    10861 ggatcaacat cgaaatcgat ccgaatacgc aggcaatcgt cgataccgtc gaacggctga
    10921 tggcgcaaag atatgcaaag tgaggcagag atggaattga acgaatttct cgataaagcc
    10981 tatgccgttt tgcggcgttt ggatgccgtg cttccgcccg aacccgggca tacggattgg
    11041 aacgcgcttg ccttccgctg gcagagtgcg ggcaaaaaag gttttttgga acacttgccc
    11101 gatccgcaca cctttccctt ggtaaggctg gcgggagtcg gcaggcaaac cgaattgctg
    11161 gtgcgtaata ccgaacagtt cattgtcggc agacccgcga acaatgtatt gatgagcggc
    11221 gcgcgcggaa caggcaaatc ctcgctggtc aaagccctgc tacacgaata tgcggataag
    11281 ggattgcgcc tgatcgaagt cgataaaagc gatttaatcg gcctgcctta cctgttgacg
    11341 cttttgaagg aacgtccgga aaaatttatc gtattttgcg acgatttgtc gtttgaaagc
    11401 ggcgatgaaa cctataaggc attgaaaacc gcgttagacg gcggtctgtc tcaacgttgc
    11461 gccaacgttt tggtttacgc gacttccaac agacggcacc tgatgcccga atattttgac
    11521 gagaatgccg gtacgacggg gatgcggggg gaaatccatc agaaagaagc ggtggaagaa
    11581 aaaatatccc tgtccgaccg attctgattg tggctcagtt tttatccgtt cgatcaaaac
    11641 gattatctgg cggcggtgca aaattggctg gaagatttcg gcgtgccgta tgatgaaacc
    11701 gcacagatgg cggcattgca gtgggcgcag acgcggggca gccgttcggg acgttccgcg
    11761 tggcagtttg cctgcgactg ggcgggcagg ctgccgaaac aacgggcgtt gtgagcgttt
    11821 cggggattat ttgaggcagg aagaaagcca catttgctgc tgttgcggtg tgaggatatg
    11881 gaagaaccgg tgttggattt ccaattcgtc caccgcaaaa tccataccgg acaaatagcg
    11941 gctttcgaca taatcgcgcg cctcgttccg attaaaaaca tccgaggaaa tgatttcgac
    12001 gacagaccgg cggcggctgt gttcggaatg cataaccttc aaacgcgccc tgtcgcccgc
    12061 cattttgaag gcggtgcgga ttttacgcag ctcattgtgc tgactttggg tcagcccgag
    12121 tcggcgtatg tcgcagttcg gttgaaaatc gttcgggggg atataagccg tggcggcgtg
    12181 ggaaagctga caggaaagca aagccatact taaaaaagag gcggcaggtt tggcaaaacg
    12241 gcagggagca ggcagtggca cggcttttcc tttaatccag atatttcgga caatatactt
    12301 gattgccgtg tgaaagatgg tattatggca gttaactttt gttaataatg ctgtttcggg
    12361 gctttcccgc gttgagtccg cccgtaaagg cattgaagga aaaaatatga ccgcctaccg
    12421 tatcgcaccc agtattttgt cggcagactt tgcccgcctc ggagaagagg tggaaagcgt
    12481 cattgcggca ggtgcagatc tgatccattt tgacgtgatg gacaaccatt atgtgccgaa
    12541 cctgaccttc ggccctatgg tttgcgcggc gttgaagcct tatgcaagcg tgccgatcga
    12601 tgtgcatctg atggtcgaac ccgttgacga cctgattcag tcgtttgcca aagcaggagc
    12661 atcgattatc acttttcatc ccgaagcgag ccgccatatc gaccgcagct tgagcctgat
    12721 tcgtgatatg ggctgtcagg cggggctggt gttgaatccg gcaacgcccg tatatctgtt
    12781 ggaaaacgta ttggacaggc tggatatggt tttgctgatg tcggtcaacc ccggattcgg
    12841 cggacaaagc ttcatcccgc acacccttga aaaaatccgc cgggtgcggg cgatgctgga
    12901 tcggtacgaa gcacaaagcg ggcggcacat cgccatcgaa gtggacggcg gcatcaaaac
    12961 cgacaatatt gccgccgttg cccgagctgg tgcggatacc tttgttgccg gttctgcgat
    13021 tttcggcaaa ccagactata aggcggtgat tgatgcgatg agggcggaac tggaaaaaag
    13081 cggcaggctg aaccttgcgc caatgattga aatagaaatg ccgtctgaaa attagctctg
    13141 tttcagacgg cattgcgtta tttttcgacg ggcagcccga aatgcaggta ggcgcgttcg
    13201 gtcgccatcc tgccgcgcgg ggtgcgttgc aggaagcctt gttggataag gtagggttcg
    13261 ataacgtctt cgatggtgtc tgtagattcg ccgatggcgg cggcaacatt gtccaaaccg
    13321 accgggccgc cgccgaattt gtgcaaaacg gcttcgagaa atttcctgtc catcacgtcc
    13381 agcccctgcg cgtccacgtc cagcatactt aaagcggcat cggcgatgcc gccgtcgatt
    13441 gtgccgttgt ttttcacgtc ggcgaaatcg cgcacgcgtc gcaacaggcg gttggcgatg
    13501 cgcggcgtac cgcggctgcg tttggcgatt tcttccgcgc cttcttcgga catatcgagc
    13561 tgcaacagtt gtgccgaacg gctgacgatg gtggtaaggt ctcggttttc gtaaaactca
    13621 aggcgggaga cgatgccgaa gcggtcgcgc aacggattgg tcagcatacc ggcgcgggtg
    13681 gtcgcgccga tgagcgtgaa gggcggcagg tcgattttga cggaacgggc ggcgggtcct
    13741 tcgcctatca taatgtcgag ccggtagtct tcgagcgcgg gatagaggat ttcttcgaca
    13801 acagggctga ggcggtggat ttcgtcgatg aacaatacat cgtgcggatc aaggttggtc
    13861 aaaagggcgg cgaggtcgcc tgcgcgttcg aggacggggc cgctggtttg gcgcaaattt
    13921 acgcccaatt ctttggcgat gatgtgcgcc agtgtggttt tgcccagtcc gggcgggccg
    13981 aagagcaaaa cgtggtcgag tgcttcgccg cgttttttgg cggcttggat gaaaatggca
    14041 agctgttctt tggctttgtc ttgcccgatg tagtcgtcca gcgttttggg gcggagggcg
    14101 cgttcgagca gttcttcctg tgcggaggcg gtttgggcgg caacgatgcg ttgcggttgc
    14161 gcggcggtca ggttgtcggt ttgcagcata gtgttccctt tgtcgggtat gccgtccgaa
    14221 cggtcggcgg cgtttcagac ggcattgaaa agataacggt caaaagcgtt ttatccgcgg
    14281 gtttcgcgcc aaacgagata gtcgcgcagg ggcggcatag gcgggttgat gcagtggggg
    14341 cagatgccgg tggtgtcttc gtcgtcgctg tcgatgtggt aggcgttggg gtcgaagcgg
    14401 atttgctgca tgacggcttg cgccaatgcc tgcgcctgaa caacgtcgaa attgaatttt
    14461 tcgaggattt cgttcaacag gcggatttcg ccaccgctaa attccgcact gtgtttgagg
    14521 atgaggcgtt gataatcttc gttgttgatt ttaggcaata aatcggtttt cagggtcatg
    14581 attttatgtc gggggcagga tggctgaagc gtgaattata gcggatatgg cggcggctgt
    14641 tgcaaagctt ggattgggta tcgtcctcaa aact
//
LOCUS       DAXHKG010000044        14597 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.044, whole genome shotgun sequence.
ACCESSION   DAXHKG010000044 DAXHKG010000000
VERSION     DAXHKG010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14597
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.044"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(69..2045)
                     /locus_tag="ACFMWP_001007"
     CDS             complement(69..2045)
                     /locus_tag="ACFMWP_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HFC5891627.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="ACFMWP_001008"
     CDS             2194..3033
                     /locus_tag="ACFMWP_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HFC5891628.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GETVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQDAAQN
                     TAS"
     gene            3232..4263
                     /gene="gap"
                     /locus_tag="ACFMWP_001009"
     CDS             3232..4263
                     /gene="gap"
                     /locus_tag="ACFMWP_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC5891629.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4511..5236)
                     /gene="aat"
                     /locus_tag="ACFMWP_001010"
     CDS             complement(4511..5236)
                     /gene="aat"
                     /locus_tag="ACFMWP_001010"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HFC5891630.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFLRDGWFFWYAVGPRAVIVPERLHVPRSLEKTLRNCSYRVTVNGCFAEVVAHC
                     AAAVRPNQDGTWIAPEFQTAYLKLHEMGYAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLASLGVELIDCQQDTGHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5306..5740)
                     /gene="fur"
                     /locus_tag="ACFMWP_001011"
     CDS             complement(5306..5740)
                     /gene="fur"
                     /locus_tag="ACFMWP_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HFC5891631.1"
                     /translation="MEKFSNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            5967..6344
                     /locus_tag="ACFMWP_001012"
     CDS             5967..6344
                     /locus_tag="ACFMWP_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC5891632.1"
                     /translation="MNKTLILVLSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPMLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RAEGDALQNAAEALRAKQNADKQ"
     gene            6354..7163
                     /gene="dapB"
                     /locus_tag="ACFMWP_001013"
     CDS             6354..7163
                     /gene="dapB"
                     /locus_tag="ACFMWP_001013"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HFC5891633.1"
                     /translation="MIPLKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDTVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIQAAGEKTGVVFAANFSVGVNLTFHLLDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKASSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(7427..7837)
                     /locus_tag="ACFMWP_001014"
     CDS             complement(7427..7837)
                     /locus_tag="ACFMWP_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891634.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGSRYDLPTGFSIDIVCREIELEFLDQESFN"
     gene            8060..8449
                     /locus_tag="ACFMWP_001015"
     CDS             8060..8449
                     /locus_tag="ACFMWP_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HFC5891635.1"
                     /translation="MNVKIKYNLLEYCEYLGGIFGVYKNYLNMDIKDPNLKIRFFDFL
                     EELLSDGVIELCDYRENPPKILTGSPKTQVDELRRIWPDMEEMLLYFPDNPWFYVEHF
                     WWGATCPIELTQLPKIEIYEEQMKQGK"
     gene            complement(8493..8651)
                     /locus_tag="ACFMWP_001016"
     CDS             complement(8493..8651)
                     /locus_tag="ACFMWP_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891636.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNETELARMGLRL
                     KYNGQLTD"
     gene            complement(8659..9813)
                     /gene="lpxB"
                     /locus_tag="ACFMWP_001017"
     CDS             complement(8659..9813)
                     /gene="lpxB"
                     /locus_tag="ACFMWP_001017"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HFC5891637.1"
                     /translation="MVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARFVGIGGE
                     LMKAEGFESLYDQERLAVRGFAEVVRRLPEILRIRRGLVRDLLSLKPDVFVGIDAPDF
                     NLGVAERLKRSGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLYLDAGGR
                     AEFVGHPMAQLMPLEDDRETARKTLGVDAGIPVFALLPGSRVSEIDYMAPVFFQTALL
                     LLERYPAARFLLPAATEATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAADAVLVTS
                     GTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPELLQSEAK
                     PEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(9879..10871)
                     /locus_tag="ACFMWP_001018"
     CDS             complement(9879..10871)
                     /locus_tag="ACFMWP_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC5891638.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPLDLAQFAVMLENGTKM"
     gene            11364..14123
                     /locus_tag="ACFMWP_001019"
     CDS             11364..14123
                     /locus_tag="ACFMWP_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HFC5891639.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVHDQVAEFMSYVMPGNVGRLKLYQDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGSDIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVHAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRIDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGSEKAKASRPEPAVKGVRHTQPAPTVAPEKKASWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRSE
                     RGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         3769 a         4536 c         3384 g         2908 t
ORIGIN      
        1 ttcgatttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg acggacggtt
      301 tcgccgtttt cgccgaatcc tgcctcatca tcactaccga caaacagtcc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccgata cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgtcccagac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagaaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccctgcgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatgc cggcaacgaa tgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacgggacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccaccca gcccgaacac cagccgcctc
     1801 attgccctca gcttgggcag cgaaaactcc aagcctatac tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgtcgcatgg cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggcc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgcattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctatgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga aaccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc ggatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg cgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgtcgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgcgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat acctcaaaca atacaaagcc
     3001 aagcaggatg ccgcacaaaa caccgcctcc tgacccttcc ctgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa ccctcaacaa aggaacgaac catgggcatc
     3241 aaagtcgcca tcaacggcta cggacgcatc ggccgccagg ttttgcgcgc catctacgat
     3301 tatcagattc aagaccaact ccaaatcgtc gccgtcaacg ccagcggtag ccttgaaacc
     3361 aacgcccacc tcaccaaatt cgacaccgtg cacggacgct ttgaagccga cgtatcccac
     3421 gacggcggca acctcatcgt caacggcgac aaaatcccct tcttctcgac ccgcaaccct
     3481 gccgaactgc cgtggaaaga actcggtgtc gatttggtca tggaatgcac cggcgcgttt
     3541 accagcaaag aaaaagccaa aatccacctc gaaagcggcg cgaaaaaagt cctcatttcc
     3601 gcaccgggcg gcgacgatgt cgatgcaacc gtcgtgtacg gcgtgaacga cagcgtcctg
     3661 accgccgaca tgaccgtcgt ttccaacgct tcctgcacca ccaactgcct ctcgccggtt
     3721 gccaaagtgt tgagcgaaag cgtcggcatc gtcaaaggcg cgatgaccac catccacgcg
     3781 ctgaccaacg accaaaccgt taccgacgtg cgccacaaag acctgcgccg cgcccgcagc
     3841 ggcgtggaaa acatgattcc gaccaaaacc ggcgcggcaa aagccgtcgg tttggtactg
     3901 cccgaattga aaggcaggct cgacgggctt gccatccgcg tgccgaccgt caacgtatca
     3961 ttggtagatt tgagcttcca agccgcgcgc gacacgacag tcgaagaaat caacgcactg
     4021 atgaaagccg cctcggaagc aggcgcgctc aaaggcgttt taggctacaa caccctgccc
     4081 ttggtttcca tggacttcaa ccacactacc gaagccagcc acttcgacgc aacactgacc
     4141 aaagtcgttg acggcaacat gattaaagtc ttcgcatggt atgacaacga atggggcttc
     4201 agctgccaaa tgctgaacac cgcacgccgt atgttcggac ttgaagtgcg cccgctcaaa
     4261 taagcaataa accgtcaaac aaaatgccgt ctgaaacccg atgttttcaa gttccagacg
     4321 gcatttttca ccgtgatttt acccggctgt cgtcatttcc aattttatag tggattaaca
     4381 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcgaggcaa
     4441 cgccgtactg gtttaaattt aatccactat aatccaccat atttgaacct gaccgaagca
     4501 taagccgcca tcaaagcccc ttgcacgcca cttcgcgccg cccgatttcc tctttcaacg
     4561 gcacggcgtt caacatccgc agacgttcgg caaaatccgc aaacggcagc agctccgaac
     4621 cgaaacggcg catatgcccc gtatcctgct ggcagtctat cagttccaca cccaaagacg
     4681 cgagaaacgg cacggcgcag gcaaacgcga ttttcgacgc atccggttgt aatgcgaaca
     4741 tcgattcgcc gtaaaacacc ctgccgatct gaacgccgta aaacccgccc gccaacctcg
     4801 ttttaccgtt ttcatcggga taatggcact caaacgaatg cgcgtatccc atttcgtgca
     4861 gcttcaaata tgccgtctga aactcgggcg caatccaagt tccgtcctga ttcgggcgca
     4921 ccgctgccgc acaatgcgcg accacttccg caaaacagcc gttgaccgta acccgatagc
     4981 tgcagttgcg tagcgttttc tccagcgagc gcggaacgtg cagacgttcg ggaacaatca
     5041 ccgcacgcgg cccgaccgca taccaaaaaa accaaccgtc tcgcaaaaac caaggaaaca
     5101 cgccgttccg atacgcctcg agcagccgcc ccgcgtccaa atccctgctc acgccgacca
     5161 gcccgtcgca ccgtgccaaa gcataggcag gatcgggaaa ggcataattg tcaggggcaa
     5221 gcagcggaat acgcatggca gttctccaaa aacacagacg gcatccaaaa tcatgaatgc
     5281 cgtctgaaca acaaaccgtc cggatttaac gtttgccctt ggcctgacag tcgctgcaca
     5341 cgccgtacat ataaagcgcg tgatcgacga tgcggtagcc gttttcctcg gcgattttgt
     5401 cttgcagggc ttcgatttcg ggattgtgga attccgttac ctcgccgcac ttcacacaga
     5461 cgatatggtc gtggtggtcg cccttgtcca actcataaac cgccttgccc gtttcaaaat
     5521 ggtggcgttg caaaatgccc gcctgctcaa attgcgtcag cacgcgataa atcgtcgcca
     5581 caccgatttc cacaccctct tccaacaaaa tacggtacac atcctcggca ctcaaatgct
     5641 cttccgcatg agtctcgaac aaatccaaaa tcttcaaacg cgggccggta actttcagtc
     5701 cactgtcttt cagttgcgca atgttgctga atttttccat aatattcaat atccctgtaa
     5761 aataatagac gctataatac gcaatttcag cctgcttgcc cactatcaca ccatagcagt
     5821 ttgcaatagc aaaaccgcaa cggcggacgg gcagtcggac acagacaggg tgaaataccg
     5881 cttaagcgta tgattatcgt tcgcttttat aaaatattca agcagtgcta cactagacat
     5941 cccgatttgc acagaaaggt tctcccgtga acaaaaccct catactcgtc ctttccgccc
     6001 tgttcagcct gaccgcgtgc agcgtcgaac gcgtttcact gttcccctcg tacaaactca
     6061 aaatcataca gggcaacgaa ctcgaacccc gcgccgttgc cgccctgcgc cccggcatga
     6121 ccaaagacca agtcctgctc ctgctcggca gccccatgct gcgcgacgca ttccataccg
     6181 accgctggga ctataccttc aacacctccc gcaacggcat catcaaagaa cgcagcaatc
     6241 tgaccgtcta ttttgaaaac ggcgtgctcg tacgcgccga aggcgacgcc ctccaaaatg
     6301 ccgccgaagc cctccgcgcg aaacaaaacg cagacaaaca ataaggaaca cacatgatac
     6361 cgctcaaaat cgccatcgcc ggcgtcaacg gccgcatggg gcgcgtattg gttgaagccg
     6421 tcaacaacca tcccgacacc gtcctttccg gcgcgctcga acactcgggc tcagaagccc
     6481 tcgggctgga cgcaggctac gccgtcggac tcaaaaccgg catcgccatt tcagacgacg
     6541 ttgacaccgt tctcgcacaa agcgacgtac tcatcgactt tacccgcccc gagccgaccc
     6601 tcaaacacct gcaaaaatgc gttgaaaaac aagtcaacat catcatcggc acaacaggct
     6661 tcgacgatgc gggcaaagcc gccatccaag ccgcaggcga aaaaacaggc gttgtcttcg
     6721 ccgccaactt cagcgtcggc gtcaacctca ccttccacct cctcgacacc gtcgcccgcg
     6781 tattaaacga aggctacgac atcgaaatca ttgaaggtca ccaccgccac aaagtcgatg
     6841 cccccagcgg caccgcgtta cgcatgggtg aagtcatcgc cggcgcgctc ggccgcgacc
     6901 tcaaacaatg cgccgtttac ggccgtgaag gccacaccgg tccgcgcgat ccgtccacca
     6961 tcggctttgc caccgtccgc gcaggcgaca tcgtcggcga ccacaccgcc ctcttcgcca
     7021 ccgacggcga acgcgtggaa atcacccaca aagccagcag ccgcatgacc tttgccgccg
     7081 gtgccgtccg cgccgcagtt tgggtaaacg gcaaaacggg tttgtacgat atgcaggatg
     7141 tactcgggct gaacaaccgt taacccccat acaaaatgcc gtctgaaaag atattgttca
     7201 gacggcattt tgccgacagg ctccgtatcg gcatatcaat gtttcaacac acaggacgac
     7261 acataaagcg tcgccctatg tgttgccctg attcggaagg ggttacgccc ctcccaaata
     7321 aagtctgatt ctaccgcccc gaaggacaga tgtccgagtg gcggggtttc aaccgaaaag
     7381 gaaatacgat aaagttgcct gctcagcata acaagctacg gctcgtttaa ttgaaactct
     7441 cctgatctaa aaattctaac tctatttccc ggcaaactat atctatacta aaaccggtcg
     7501 gaagatcata cctactgcct atcacttcca gcgcacctcc ataatccaag atttcatcat
     7561 cctgctttaa ttctccaagt tccaatacat ttttgatatt tttatcttgg ttcttcgtgg
     7621 cgtatccata gataaatttc agatagctga actgcttgaa tttaattttt acccagtctg
     7681 tataatttgg tgtaggaatc tcttgaggaa agtccggata atccacattc tggacgatga
     7741 tatggaattc atcgtttttc aaagtatagt ttaatagagt gccctcatat atatacagaa
     7801 attgataatc tttttttgga atggtataag ttgtcatatt attttacctt ttcaaaaaca
     7861 atgagtttaa gattttttga gtccaagttg gttctactac tcttatgaaa tttcagttgt
     7921 ttaaactctt cctttatttt aaggaatttt tcaactagcc gagaacaaac tggagcaaaa
     7981 tggacgattg agtttaggaa tcaacctgat tcagtacatg ggcaaagatt agaattaaaa
     8041 tttagataaa ggttacgtta tgaatgtgaa gataaaatat aatcttttag aatattgtga
     8101 atatttaggt ggtatttttg gtgtttataa aaattattta aatatggata tcaaagatcc
     8161 aaatttaaaa attagatttt ttgatttttt ggaagaactt ttatcagatg gtgttattga
     8221 attatgcgat tatcgtgaaa atcctccaaa aatattaact ggttcgccaa aaacacaggt
     8281 agatgaatta agaagaattt ggccggatat ggaagagatg ttgctatatt ttccagataa
     8341 tccttggttt tatgtagaac atttttggtg gggagcaact tgccctattg aactgacaca
     8401 attgcctaaa atagaaattt acgaagaaca aatgaaacaa ggtaagtaag cgtattagta
     8461 taagctataa tcataaatca tatataacaa aattaatcag ttaactgacc attatatttt
     8521 aaccttaatc ccattcgggc cagttctgtt tcatttggaa ttcctcttaa atacttattg
     8581 tttgatgtgc cattaatcac aatttctccc cctttttttg taatacgtgc tgcttcggga
     8641 aaataatcca ttaaccgctc aacatcccgc ctcttccaaa accgcgcgcg cggccaaatc
     8701 cgccgtatct tttttcaaca gcaggtgcaa cgccctgaaa tcctgttgca gcgcggcaac
     8761 cttatcgggg tgttcgtacc agtccgccaa cgccgccgcc agtttttccg gttttgcttc
     8821 agattgcaat aattccggca cagcctcctt acccaacagg atattcggca ggccgacatg
     8881 cggcactttg attttgcgtt tcacataagc ataggtcagc ggcgaaatct tgtagctgat
     8941 gaccatcgga cgcttacaca acgccacctc caaagttgcc gtaccgctcg ttaccagcac
     9001 cgcatccgcc gccctgcaca ctgtttcaga ctgtctgtcg attaccgtca gcggcaatcc
     9061 ggcaaactcc ggccgctgca aaacttccgc caaacgccgc ttcgtcgcct ccgttgcggc
     9121 aggcagcagg aagcgtgcgg cgggatagcg ttccaacaac aataatgccg tctgaaaaaa
     9181 caccggcgcc atatagtcga tttcgctgac gcggctgccg ggcagcaggg cgaatacggg
     9241 gatgccggca tccacgccca aagttttccg cgccgtttca cggtcgtctt ccaagggcat
     9301 aagctgcgcc atcggatgac cgacaaactc cgcacgtccg cccgcatcaa gataaagctg
     9361 cggctccatc gggaacaggc acagcacgcg gttgacctga tgcacgattt tgcccacgcg
     9421 ttcccgccgc cacgcccaaa ccgacggact gacataatgc acggtcggaa tccccgaccg
     9481 tttgagccgc tccgccacac ccagattaaa atcgggcgca tcgatgccga caaagacatc
     9541 aggtttcaac gacagcaaat cccgtaccag ccccctgcgt atccgtaaaa tttccggcag
     9601 ccgcctgacc acttcggcaa agccgcgcac cgccagtcgc tcctgatcat aaaggctctc
     9661 gaaaccttcc gccttcatca gttcgccgcc gataccgaca aaacgcgcct gcgggcaacg
     9721 cttgcggatg gcgcgtatca ggtgcgcccc caacaggtcg cccgacgctt cgccgacact
     9781 gacagcaatc aaagggcttt ttttatcaac catattcgtt cttcttcaca tactttcacg
     9841 tcccgatgcc gtctgaaggc ttcagacggc atcggggttc acattttcgt cccgttttcc
     9901 aacatcaccg caaactgtgc caaatccagc ggcagctccg ccttcaacac cagcggctcg
     9961 cccgtgagcg gatggttcaa gtgcagctcg gacgcgtgca aaaacatccg cttcaaaccc
    10021 aacttctgca aacgacggtt cgcctgataa tcgccgtagc gttcgtcgcc cgcaatcgga
    10081 cagccttgag attgcaggtg gacgcggatt tggtgcgtgc gccccgtttt caacgtcgcc
    10141 cgcaccaaag tcaggtgcga cagcccgaca ccgtgcaaaa tgccgtctga aaaacggctt
    10201 aacacacgga acaccgtatg cgccgactgc ccgtccgcac tgacgcgcac catcttttcg
    10261 ccttgtgcgc cggtatattt gaacaggggc agtttgacat ggaaattgtc gtccggcagt
    10321 ttgcccaccc ccagcgcaag gtagattttt ttggggtggt cgttacggat ggcttcgtga
    10381 agtttgacga gcgcgctgcg tttcttcgcc accatcaaca agccgctcgt atccttgtcc
    10441 aaacgatgaa ccaactccaa atacttcgcc tccggacggg cgcggcgcaa ctgttcgata
    10501 acgccgaaac tcacgccgct gccgccgtgg acggcaacgc cggacggttt gtcgatgacc
    10561 aaaagcgcat cgtcttcgta aacaacgtca aacgcacgcg ccggtacggc ggcacgcctt
    10621 tcagacggca tttccttctc cgccacgcgc acaggcggaa tccgcaccgt atccccctcc
    10681 gcaatacggc tgtcgggttt gcagcgtttc ttgttcaacc gcacctcgcc ggcgcggata
    10741 atgcggtgga tatggctctt gggcacgccc ttgaggattt ttatcagata gttatcaagg
    10801 cgttgccccg cctcatgttc ggcgacccct atcaagctga ccgaatcttt gcttatttcg
    10861 tgcgttttca tctataatcc gaacatccgt ttcagcaaaa agcgcgcccg ccgcgcctcc
    10921 tgaaacggtt tactttaaaa cggaatttta tattaaaaac gcactccgca aagcattttc
    10981 cctgcgcctg ttcccagccg gcaggcgcag aacgtagtca agtttgaatt gattttgccg
    11041 tttcggcgcg gaagtaagac ggcagccggg cccaagcccc aaacgcaaac cgcccgaaaa
    11101 cacaggcatc acgataacaa gaagaagccg gcacccattt ttccgaccat accgctcgga
    11161 acgcggcaga cagaccgccg catcgatctt tatagccttc tgtatccgac ccttccgcac
    11221 acggttctcc ggaacgtgca tccctgcgga ttttcaactc aaaaactgat taccggtttt
    11281 atccgaagac atcggaaaac ccagccttac ggaatgccga accggaccgg cgcgcccgaa
    11341 tgccgcccgt ccacgaggtg atcatgaaaa gaatgttatt caacgcaacg caggccgaag
    11401 agctgcgcgt tgccatcgtc gatggccaaa accttttgga cttggacatc gaaacgctgg
    11461 gcaaagaaca gcgtaaaggc aatatctaca aaggtatcat tacccgcatc gagccgtcgc
    11521 tggaagcatg tttcgtcgat tacggaaccg accgccacgg ctttttgccg tttaaggaag
    11581 tatcgcgttc atatttccgc gactacgaag gcggcagggc gcgtattcag gacgtgctca
    11641 aagagggcat ggaagtcatt gtccaagtcg aaaaagacga acgcggcaac aaaggcgcgg
    11701 cgctgaccac tttcatcagc ctggccggcc gctatttggt attgatgccg aacaacccgc
    11761 gcggcggcgg cgtatcccgc cgtatcgaag gcgaagagcg tcaagagttg aaagccgcca
    11821 tggccgaact cgacattcca aacggcatga gcatcattgc ccgtactgcc ggcatcggcc
    11881 gcagtgcgga agagttggaa tgggacttga actacctcaa acaactctgg caagccattg
    11941 aagaagcagg caaagcacac catgaccctt acctgctctt tatggaaagc tcactgctga
    12001 tccgtgcgat tcgagactat ttccgtcccg atatcggtga gattttggtg gacaatcaag
    12061 aagttcacga ccaagttgcc gagttcatga gctacgtcat gccgggcaat gtaggccgtc
    12121 tgaaactcta tcaagaccac acgccgctgt tctcccgttt ccaaatcgaa caccaaattg
    12181 aaagcgcgtt ctcacgcagc gtcagtctgc cttccggcgg cgcgattgtg atcgaccaca
    12241 ccgaagccct ggtttccatc gacgtcaact ctgcccgcgc cacacgcggc tctgacattg
    12301 aagacaccgc gttcaaaacc aatatggaag ccgccgaaga ggttgcccgt caaatgcgcc
    12361 tgcgcgactt gggtggtttg gtcgtcatcg acttcatcga catggaaaat ccgaaacatc
    12421 agcgcgatgt tgaaaacgtc ctgcgcgatg cgctcaaaaa agaccgcgcc cgcgtgcaaa
    12481 tgggcaaact ttcgcgtttc ggccttttgg aattgagccg ccaacgtctg aaaccggctt
    12541 tgggcgaaag cagccacgtc gcctgtccgc gctgcgccgg cacaggcgtc atccgcggca
    12601 tcgaatccac cgccctgcac gttttgcgta tggttcagga agaagcgatg aaggacaaca
    12661 ccggcgaagt gcatgcacaa gtgcccgtcg atgtcgccac cttcctgctg aacgaaaaac
    12721 gcgccgagct gtttgcgatg gaagagcgtt tggatgtcaa cgtcgtcctg attccaaaca
    12781 tccacttgga aaatccgcac tacgaaatca accgcatccg cattgatgac gtagaagaag
    12841 acggcgaacc gagctacaaa cgcgttgccg agccggaaga agacgaatcc gccaaacctt
    12901 tcggcagcga aaaagccaaa gcttcccgtc ctgagccagc tgtcaaaggc gtacgccata
    12961 cccagcctgc accgactgtc gcccctgaga aaaaagcctc ttggtgggac agcttcaaag
    13021 cttggttgaa acgcattttc ggcggcagcg aaacccaagc cgcgcccgct gccgaaacct
    13081 ccgaaaaacg cagcacggca aaccgcagcg gcagccgcgc caacaaccgc cgccaaaacc
    13141 cgcgccgcag caaacgcgaa ggcagcaaag tagaagtccg cgaagtggca ggcaaaactg
    13201 ccggacagga agcgcgcgcc gacaaagccg aaacgcgcaa caacggcaac cgccgccgca
    13261 acgaacgcgg cgaccgtgcc gccggacgcg ccgacgaagc ggaaatccaa gaccgcaaca
    13321 tacagcctgc cgcaaccgtt gcagatgccg caccgtccga aaccgaagtg caaaccggaa
    13381 aacgccgccg caacggcagc cgcagcgaac gcggccaaac cgcgccggaa accgccaccg
    13441 ttgccgaaac aaccgttcag acagcggaaa acacgccgtc cgaaccgcat accgcagaag
    13501 acaaaggcag caagcccaaa tccgaacgca accgccgcga acgcgacagc cgagatgcca
    13561 aagaacgccg cgagcgcaac aatcagcgcg accgccgtca aaacggcaaa aaacgcaata
    13621 ttccgtctgc cgccaaaatc gagcagtacc tgaatattca cgacaccgcc gacaaagtcc
    13681 gttccgccgc cgcgcacgtt ttcggcgaaa ccgacgcaaa cgcgccgatt accgtcagca
    13741 ttgccgatcc ggttgcagaa agggatcttc cgacagcatc tcccgccgtt tcaaacggcg
    13801 acgcaccggt ttatgatgcg gcggaaaaaa tccgccgtgc caccgccgcc atcctgcccg
    13861 aaggcgcgac accgaaagcc gaagcacagg aaatgccgtc tgaaaccgca acctttacgg
    13921 ctgcggcgga acaggcacgg gaaaccgcac aaaccggcgg actcgtcctg atcgaaaccg
    13981 accctgccgc attgaaggca tgggcggcac aacccgaagt ccaagccgga cgcggtttgc
    14041 gccgttccga acagcccaag ccgtctgaag tcgcaaccgt ccctgccgaa gaaatgatcc
    14101 aagtcgaaac ccggcaaggc tgaaccgacg gcggcaaaaa gaggttctgt tccgcagaac
    14161 ctctttttta catgggttcg gatacctgca atgccgtctg aaacttcgcc attcccgtga
    14221 ttaccgaaac attcctccat tcccatgatt cccgcaacat tccgtcattc ccatgattcc
    14281 cgcaacattc cgtcattccc gtgaaaacgg gaatctagaa cctctaaact ttcagataat
    14341 ttttgaatat tgccgccgcc caaaggtcta gattcccaca acctttcgtc attcccgtga
    14401 aaacgggaat ctagaacctc aaactttcag ataatctttg aatattgccg ccgcccaaag
    14461 gtctggattc ccgcctgcgc gggaatgacg gtttagaaat tgcccgaaat ctcaaaaaaa
    14521 accgaaaccg aacaagccag attcccgcaa catttcgtca ttcccgtgaa aacgggaatc
    14581 tagaacctca aactttc
//
LOCUS       DAXHKG010000045        13856 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.045, whole genome shotgun sequence.
ACCESSION   DAXHKG010000045 DAXHKG010000000
VERSION     DAXHKG010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13856
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.045"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(194..1459)
                     /gene="ftsY"
                     /locus_tag="ACFMWP_001020"
     CDS             complement(194..1459)
                     /gene="ftsY"
                     /locus_tag="ACFMWP_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HFC5891640.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            1605..3173
                     /gene="msrAB"
                     /locus_tag="ACFMWP_001021"
     CDS             1605..3173
                     /gene="msrAB"
                     /locus_tag="ACFMWP_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HFC5891641.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            complement(3275..3760)
                     /locus_tag="ACFMWP_001022"
     CDS             complement(3275..3760)
                     /locus_tag="ACFMWP_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HFC5891642.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(3787..4635)
                     /locus_tag="ACFMWP_001023"
     CDS             complement(3787..4635)
                     /locus_tag="ACFMWP_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFC5891643.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            complement(4729..5730)
                     /locus_tag="ACFMWP_001024"
     CDS             complement(4729..5730)
                     /locus_tag="ACFMWP_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5891644.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            5789..6469
                     /locus_tag="ACFMWP_001025"
     CDS             5789..6469
                     /locus_tag="ACFMWP_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HFC5891645.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQEYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTKLHGMADTEHTLCR
                     LNGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVWFGAKSHALSFIDACARDMAQLARYAETLSEH
                     RQTHYNTL"
     gene            6495..6767
                     /locus_tag="ACFMWP_001026"
     CDS             6495..6767
                     /locus_tag="ACFMWP_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HFC5891646.1"
                     /translation="MRKTFLILMTTAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            6822..8192
                     /gene="glmU"
                     /locus_tag="ACFMWP_001027"
     CDS             6822..8192
                     /gene="glmU"
                     /locus_tag="ACFMWP_001027"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HFC5891647.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            8267..8596
                     /locus_tag="ACFMWP_001028"
     CDS             8267..8596
                     /locus_tag="ACFMWP_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HFC5891648.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVL
                     DANGAALQNGDTVILIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(8668..9933)
                     /gene="efeB"
                     /locus_tag="ACFMWP_001029"
     CDS             complement(8668..9933)
                     /gene="efeB"
                     /locus_tag="ACFMWP_001029"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HFC5891649.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKRGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQLDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(10197..11363)
                     /gene="efeO"
                     /locus_tag="ACFMWP_001030"
     CDS             complement(10197..11363)
                     /gene="efeO"
                     /locus_tag="ACFMWP_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HFC5891650.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     VSELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            complement(11360..12199)
                     /gene="efeU"
                     /locus_tag="ACFMWP_001031"
     CDS             complement(11360..12199)
                     /gene="efeU"
                     /locus_tag="ACFMWP_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
                     /protein_id="HFC5891651.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMVLWMKKAARSMKQQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIVVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVMTWFLCGSRPSETLTRKE
                     ELK"
     gene            12410..13735
                     /locus_tag="ACFMWP_001032"
     CDS             12410..13735
                     /locus_tag="ACFMWP_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HFC5891652.1"
                     /translation="MKKYLFRAALYGISAAILAACQSKSIQTFPQPDTSVINGPDRPA
                     GIPDPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGKYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELTGSGNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
BASE COUNT         3182 a         4147 c         3552 g         2975 t
ORIGIN      
        1 gaatccagtg cgttgagttt cagctattta gaataaattt tgaaactcta atcccgtcat
       61 tcccacgaaa gtgggaatcc agaatctcta aagcttcagc taacctttga atattactgt
      121 tgttctaagg tctagattcc cgcctgcgcg ggaatgacgg catcggtctg ctgttttcgg
      181 acggcatttc ggctcaatcc agcagtgcgt ccacaaacgc gcgcgcgtca aacgggcgca
      241 aatcgtctat gccttcgccc acgccgatat agcggacggg gacggggcgg tcggaggcaa
      301 gcgcggcgag gatgccgcct tttgccgtgc cgtcgagttt ggtcacgatt aaaccggtca
      361 gccctaatgc gtcgtcaaag gctttgactt ggttgacggc gttttgcccg atgttggcat
      421 caagcacgac gatgatttcg tgtggcgcgt cgggcatggc tttttgcagc acgcgtttca
      481 cttttttgat ttcttccatc aaatgaagct gcgtgggcag gcggccggcg gtgtcggcca
      541 gcacaatgtc gatgccgcgc gctttggcgg cttggacggc atcgaagcac acggcggcgg
      601 aatcgcccgt ggtttgcgaa atcacggtta cgttgttgcg ttcgccccaa gcttgaagct
      661 gctcacgcgc ggcggcgcgg aaagtatcgc cggcggcaag cagcacagat ttgccctgcg
      721 cttggaaata tttggcgagt ttgccgatgg atgtggtttt gcccgcgccg ttgatgccag
      781 caagcatgat gacaaacggc tctttggttt cgggcaaaac cagcggtttc tctagaggct
      841 taatcaggtc gtacaaggct tctttcagcg cgccgcgcaa ttcgttgccg tctttcagcc
      901 ctttgaggct gacgcggtcg cgcacgtctt tcatcaggta ttcggtggct tccatgccca
      961 tatcgctggt aatcagcacg gtttccagct cttcgtacaa atcttcgtcg atttgtccgc
     1021 cgccgaacac gcccgccagc gatttcgcca ttttgtcgcg cgatttggtc aaaccttgtt
     1081 tcaaacgcgc cgcccaaccg agcttgtgtt cttcagttgt cgcaacggct tcttgaactt
     1141 gcccgacagc ctcgccgacg gtttcggcaa cggcttcttt tgccgcttcg acttgttccg
     1201 ctgctttttc cgccgcttcc tctgcttcag acagcatctc ggcaacggtt tcctttacct
     1261 gttcaaccgc accgctgacg gtttcaacag ccgattcgac ctgccctttg acgctttccg
     1321 ttaaagattc gacttcttct ttaatatttt caactatttg agtaacttcg gattctgctt
     1381 ttgctgcagt ttcctgaact tgagcctcct cgggagccgg cgtttcctgt tttttcttgc
     1441 gacggaagaa gctgaacatt gaattttcct tttaatttta gaaacttgaa atagggtgta
     1501 ttgtagcgta ttttgcgcgg caaggttgtc tgaaaatccg ggctgtaagg tttcggcatc
     1561 tcaaacgtct aatcatgcaa accgtccaca caggaaacat taaaatgaaa caccgtactt
     1621 tcttttccct ttgcgccaag ttcggctgcc tgcttgcgct gggtgcttgt tcgcccaaaa
     1681 tcgtcgatgc cggagccgcg accgtgccgc acactttatc cactttgaaa accgcagaca
     1741 accgccccgc cagtgtttac ttgaaaaaag acaaaccgac gctgattaaa ttttgggcaa
     1801 gctggtgtcc tttgtgtctg tccgaattgg gacagaccga aaaatgggcg caagatgcaa
     1861 aattcagctc cgccaacctg attaccgtcg cgtctccggg ctttttgcac gagaaaaaag
     1921 acggcgactt ccaaaaatgg tatgccggtt tgaattatcc caagctgccc gtcgtaaccg
     1981 acaacggcgg cacgatcgcc caaagcctga atatcagcgt ttacccttcg tgggcgttaa
     2041 tcggtaaaga cggcgacgtg cagcgcatcg tcaaaggcag catcaacgaa gcgcaggcgt
     2101 tggcgttaat ccgcgacccg aatgccgatt tgggcagttt gaaacattcg ttctacaaac
     2161 ccgacactca gaaaaaggat tcaaaaatca tgaacacgcg caccatttac ctcgccggcg
     2221 gctgcttctg gggcttggaa gcctatttcc aacgcatcga cggcgtggtt gacgcggtat
     2281 ccggctacgc caacggcaac acgaaaaatc cgagctatga agacgtgtcc taccgccata
     2341 cgggccacgc cgaaaccgtt aaagtgacct acgatgccga caaactcagc ctagacgaca
     2401 tcctgcaata tttcttccgc gtcgttgatc cgaccagcct caacaaacag ggcaacgaca
     2461 ccggtacgca ataccgcagc ggcgtgtact acaccgaccc cgccgaaaaa gccgtcatcg
     2521 ccgccgccct caaacgcgag cagcaaaaat accaactgcc cctcgttgtt gaaaacgagc
     2581 cgctgaaaaa cttctacgat gccgaggaat accatcagga ctacctgatt aaaaacccca
     2641 acggctactg ccacatcgat atccgcaaag ccgacgaacc gctgccgggc aaaaccaaga
     2701 ccgccccgca aggcaaaggc ttcgacgcgg caacgtataa aaaaccgagt gacgccgaac
     2761 tcaaacgcac cctgaccgaa gagcaatacc aagttaccca aaacagcgcg accgaatatg
     2821 ccttcagcca cgaatacgac catttgttca aacccggcat ttatgtggac gttgtcagcg
     2881 gcgaaccttt gttcagctcc gccgacaaat atgattccgg ctgcggctgg ccgagcttca
     2941 cgcgcccgat tgatgcaaaa tccgttaccg aacacgatga tttcagctac aacatgcgcc
     3001 gcaccgaagt gcgcagccac gccgccgatt cgcatttggg acacgtcttc cccgacggcc
     3061 cgcgcgacaa aggcggactg cgctactgca tcaacggcgc gagcttgaaa ttcatcccgc
     3121 tggaacaaat ggacgcggca ggctacggcg cgttgaagag taaagtgaaa taagccgcac
     3181 cgccgcctaa cccgacaaaa taccgtctga aacctgcaac gtttcagacg gtatttttta
     3241 tccggcgggg attctgtcca gacggagatt ttgtttagac agcatcgccg ccgttttcaa
     3301 tcagccccgc caaccgttcc aacgcgaagg cgaccgcctg cgcgcggacg gattcgcggt
     3361 tgccgtcaaa acggcgcatt gcttcgcaac ttccgcccgg aaaggcaaac ccgaaccaaa
     3421 ccgtgccgac gggtttgctt tcgctgccgc cgcccggtcc ggcgatgccg gaaataccga
     3481 cggcgtaatc cgcctgcgcc acggctttcg cgccgcgcgc catctcatag acggtttggc
     3541 ggctgaccgc gccgtgttcg agcagggttt cgggcaacac gcccaagcgg tcttctttgg
     3601 ctttgttgct gtatgttaca aaactctggt cgaaccattg cgaactgcct gcaacgcttg
     3661 tgaatgcggc ggcaagcatt ccgcccgtac aggactcggc acagcttacg gtttgacgtt
     3721 ttttcgtcag gtttcgggcg atggtgtgca gcgcgtccat tttcccactc ccctttcaga
     3781 cggcgtttaa gaattgatga tgtgtatgtc gcgttgcggg aacgggatgt tgatattgac
     3841 tttgcggagg ttttcgacca cttgttcgtt caaatcgcat tgcagcgtcc agcggtctgc
     3901 ttcgtttgcc caagcccata atgtgatttc gatggcattg tcgcccaagg cggtgatgta
     3961 ggcggcggcc tgccgctctt cgttttgaac gctcaagggg tgttcgacgg cggctttcaa
     4021 caccgcctct ttcgccactt tcaaatcgca gttgtaatcg acgccgacta tcacttgggc
     4081 gcggcaaagc ggcagggtgg aacggttgac gatgctgttg cccatcacca cgctgttggg
     4141 cagcacgact tcttcgttgt cggtcgtccg caaagaagtc tgcaccattt taatctctcg
     4201 gacatatcct tcaaaaccgc cgacgcggat aaaatcgccg actttgaacg ggcggaacag
     4261 gataatcagc gcaccggcgg caaaattgga cagctggtct ttcaaggaca acgccaccgc
     4321 caaacccgcg ccgccgatta aggcggttac ggatgttgtg gaaacgccca atctgcccaa
     4381 tgcggcaata atcaccaaaa tcaataagcc gatattggca acattacaca aaaaactaat
     4441 cagcgtggca tcgacctgcg cgcgcgtcat cgccgccctc atcacagcga caatgcgttt
     4501 cgccgcccat tttccgacca aaaaaataag cagcgcggcg gcaaggttca gcccgaacgc
     4561 ccacgccttt tcagccagat gctcccaacc ggaaacactg atcaggtgta aaaaatcaaa
     4621 ttgtttgaag tccattgttt tcctcttgat cgaacatccg ccccgtgcgg cgtaatcggc
     4681 acaggtgtaa aaatgccgta tgaagccctg cggggcggta tgtttgtttt atttcaaaac
     4741 cgttctaatc caacgggaaa cccatccgcg ctggttcgca tcaatatcgc gctgcgcggg
     4801 ggcggtggtg tgcgtcgggg cttgggcgaa gcggaacacg tcgggcaggc gcgtgttttt
     4861 gacggcgggg taaacccaca tttcggacgg aaccgcctgc tgcacttccc gactttgcag
     4921 ccattgcacc agttttgccg ccaattccgg ctgtttcgcg cccttcaaga ccgccgcgcc
     4981 ttcgacctgg cggaatacgc cgccttttaa aaacaggttg cccgtcggcg gctcgctgta
     5041 tttgcctttg gaaaaataca cttccgccgc cgggctggcg gcataaccga ccaccagcgg
     5101 atacgcgccg ccgttgtgcg aaaagtcggt gtaatacgcc tcgctccagc ctttggcgac
     5161 cttcacgccg ttctgccgca tctgtgccca ccatttgaac gcgccttctt cgcccagacc
     5221 gctgatgttc gccatcagga agcccagccc cggggacgac gtggcgggag acggcacgac
     5281 caataggttt ttatattcgg ggcgggtcaa atcctgcagg gtttgcggca gaggaagctt
     5341 tttgccttca aaccattttt tgtcgtaatt gatggacaca tagccgtaat cgaccgccaa
     5401 agccgaaggc agcccgaccg cgacgggggc ggatccgggt tgcgccgccg ccaaaatgcc
     5461 catttcccgc gccttgccga tattggcgtt gtccaagccg tacaccgcgt cggcgatcgg
     5521 gttggcgcgg ctcaaaatca gtttgttgag catttcgttc gcgccgcccg cctgaataat
     5581 cgacaccttc gcatcgtttg cccgctcgaa gcgcgcaatc agccctttgg gcaggctgaa
     5641 cgacttatgc accgccagcc tgacttccgt ctgcgcctgc aggtatgccg aaaccgccag
     5701 cagcggcagc agccaaattt tccgtttcat tccgagtcct cctctattcg ctgtaaaata
     5761 acattctaac aaattttcac ggttcaaaat gcaagaaaac ccgaccgtgt ggctgttcga
     5821 cctcgacaac acgctgcacg atgccgacgc aggcatcttc acactcatca accgcgctat
     5881 gacacgctat atggcacgcc gcctcaaact ctccgaatcc gccgcgtccg acctgcgtca
     5941 ggaatattgg caccgctacg gcgcaacgct cgccggactg caaatccacc atcccgaaat
     6001 cgacatcgcc gaatttttac gcgaaagcca tccgatcgat gcaatcctga ccaagctgca
     6061 cggcatggcg gatacggaac acaccctatg ccgtctgaac gggcgcaagg cggttttttc
     6121 caacggtccg tcgttttacg tccgtgccgt tgtcggcgca ctcggtttgg aaaaccgttt
     6181 cgacgcactg ttcggcacgg atgatttcgg actgctgtac aaacccaatc cgcaagcgta
     6241 tctcaatgtc tgccgccttt tggacgtacc gcccgaatgc tgcattatgg tggacgacag
     6301 cgcggacaac ctgcatcagg caaaagcatt gggcatgaaa accgtctggt tcggtgcaaa
     6361 atcccacgcg ctgtccttta tcgacgcctg cgcacgcgat atggcgcaac tggctcggta
     6421 tgcagaaact ttgtcagaac accgccaaac tcattacaat accctctaaa tcctgaaaat
     6481 acgaaagaaa agccatgcgt aaaaccttcc ttatcctgat gaccaccgcc gcccttttgt
     6541 cgggctgcgc gtgggaaact tatcaagacg gcaacggcaa gaccgccgtc cgtcaaaaat
     6601 atcccgccgg cacgcccgtt tattaccaag acggcagcta ctcgaaaaat atgaactaca
     6661 accaataccg tcccgaacgc catgccgtgt tacccaacca aaccggcaac aacgccgacg
     6721 aagagcatcg ccaacactgg caaaagccca aatttcaaaa ccgataaacc caccctatgc
     6781 cgtctgaagc cctttcagac ggcattgcac aggaaaacgc tatgccgcaa aacactttaa
     6841 acatcgtcat cctcgccgcc ggcaaaggca cgcgcatgta ttccaaaatg cccaaggttt
     6901 tgcacgaaat cggcggcgaa acaatgctcg ggcgcgttat cgacaccgcc gccgcgctga
     6961 atccgcaaaa catctgcgtc gtcgtcggcc acggcaaaga gcaagtttta gacaccgtca
     7021 aacgcgatgt cgtctgggtt gaacaaaccg aacagctcgg caccggccac gccgtcaaaa
     7081 ccgccctgcc ccaccttgcc gccgaaggcc gcacgctggt gttgtacggc gacgttcctt
     7141 taattgacgt tgaaaccctc gaaaccctgc tcgaagccgc aggcaacgaa gtcgggctgt
     7201 tgaccgacgt gcccgccgac ccgtcaggtt tggggcgcat catccgcgac ggcagcggca
     7261 gcgtaaccgc cattgtcgaa gaaaaagacg ccgataccgc ccaaaaagcc gtgaaagaaa
     7321 ccaacaccgg catcctcgtc ctgcccaacg ccaaactgga aaactggctg aacagccttt
     7381 ccagcaacaa tgcccaaggc gaatactacc tgaccgacct catcgccaaa gccgttgccg
     7441 acggtattaa agttcatccc gtccaagtcc gcgcctccca cctcgccgcc ggcgtgaaca
     7501 acaaacgcca gctcgccgaa ctcgaacgca tcttccaaac cggacaggcg caagaattgc
     7561 tcaaagcagg cgttaccctg cacgacccgg cacgtttcga tttacgaggc cgtctgaaac
     7621 acggacagga tgtcgtaatt gatgtgaact gtatctttga aggcgaagtc gaaatcggcg
     7681 acaacgtcga aatcggcgca aactgcgtca tcaaaaacgc caaaatcggt gcaaacagca
     7741 aaatcgcccc cttctcccac ctcgaagact gcgaagtcgg cgaaaacaac cgaatcggcc
     7801 cgtacgcccg cctgcgtccg caagcccgcc ttgcagacga cgtacacgtc ggcaacttcg
     7861 tcgaaatcaa aaacgccgcc atcggcaaag gcaccaaagc caaccacctt acctacatcg
     7921 gcgatgccga agtcggcagc aaaaccaact tcggcgccgg tacgattatt gccaactacg
     7981 acggcgtgca caaacacaaa accgtcatcg gcgacgaagt gcgcatcggt tcaaactgcg
     8041 tcctagtcgc ccccgttacc ctcggcaaca aagtaaccac aggcgcgggc agcacgatta
     8101 cccgcaatgt cgaagacaac aaactcgccc tcgcccgcgc ccgccaaacc gtcatcgaag
     8161 gctgggtgcg tcctgaaaaa gacaaacaat aaagctatgc cgtctgaagc cggtttcagg
     8221 tttcagacgg caccccaaaa caaacatccg ataaggacgg caaaccatgt cattaccccc
     8281 ttgcccgcaa tgcgcctccg aatacaccta cgaagacggc ggacaataca tctgccccga
     8341 atgcgcccac gaatggaatg aaaccgaatc cgccgccgac cttgcggctc aagtgctcga
     8401 tgccaacggc gcggcactgc aaaacggcga taccgtcatc ctcatcaaag acctcaaggt
     8461 aaaaggcagc tcgatggtga tcaaacaagg tacaaaagtc aaaggcatac gcctgcagga
     8521 aggcgatcac aacatcggct gcaaaatcga cggcagcgcg atgaatttaa aatccgaatt
     8581 cgtcaaaaaa gcctgaccgc ccaaaaacaa gaaacgccgt ccgaacccgt ttggcaaggt
     8641 tcggacggcg ttttttatat ggcggattta tacgcccagc agcccttgcc ccaaaaagcc
     8701 gcctttttcc acgccgggca agacgaagaa atagccgccg ccgaaggggc tgatgtattc
     8761 ttccagcggt tcgccgttga ggaggttttg cacgaagatg aatccgtcgg caaggtttgc
     8821 ctgatagcag acgaacacca gtccgacatc aagctgtccg cttgaggcaa gtccgcgcga
     8881 atagctgtag gcgcggcgga agaggcggtg ttttttgagg aattcgggat cgcgcggatt
     8941 cgccaggcgt atatggctgt ctttgggcgt ggtattcccc tcggggtctt tggcaaaatc
     9001 cagttggtcg gcttcttttt tgccgtccat cggcgcaccg ctgtatttgc gccgcccgaa
     9061 aatgtcggtt tgctcttgaa gcggcgtcct gtcccaaaac tcgacaaagt ggcggataag
     9121 gcggactgcc tgatagctgc cgtttttcgc ccactccggt tcgtcgaggc tgttggcggc
     9181 cacacccgtc cacaaaacct cgtcggcggt tttggggtcg gaaactttgg ggttgcccgt
     9241 gccgtcgcgg aagcccaaca ggttgcgcgc cgccatcgcg ccgggttcgg atttaggctg
     9301 ccacccgtcg atactccagc ggataacggc ggtttggacg gtgtgtttga tgatgtcgcg
     9361 cagggcggct tggcaggttt cgggggtgaa ggcacagatt tgcaggctca aatcgccgtc
     9421 gcaccagctt ttttgcagct tatcgttgga gaagtcgcgc atttcctgca aatgaatcgg
     9481 ttttttgtct ttgagtccga accggccgtc aaacaggctg ctgcccaccc ccacggtaac
     9541 ggtcaacccg tcggggttga aggctttgcc caaaatgccg ctgccggctg gcggaagttt
     9601 gtcgtcgccg tcttggtatt cgccgccttg ggtgagaaac tcgatgcggg cggtcagcgt
     9661 gcggaacagg ttttccagct gcttggcact ttgtgcggtt acgtcgaagg cgcacataat
     9721 cgaaaacgcc tgctgcggcg taacgatgcc tgcctgatgt tcgccgtagc agggataggc
     9781 ttggggcgag tgttggcttt cggcggtgcg ttcggcggtt tcgccccgtt ttttgccgcc
     9841 gagataacct ccgattgcgc cgactgctcc ggctgcgatc gcggttttaa aaagagtgcg
     9901 cctggtcggt tgtgcgggtt ggtttttgct catggtgttt ccttcaatat ccgtgcagca
     9961 ggatgggtat ccctgcacgc cgtttttcca ttaaccgata gcggcaggtt gaaatcccgc
    10021 cctgcaatat atggcggata tagtggatta acaaaaatca ggacaaggcg acgaagccgc
    10081 agacagtata aatagtacgg caaggcaagg cgaggcaatg ccgtactggt ttttgttaat
    10141 ccactataaa acttcagacg gtatctgccg ccaaataccg tctgaacgct tgcggcttat
    10201 ttcaagccga gtatgccgcg aagttgggca aggtcttcgg caagcgcgtt aatagaggcc
    10261 tgtaacgctt tgcggtcggc ttcgcccagc ttgtcgtagg tttcaaaacc gtctttagtc
    10321 cggtatttcg ccagaatttc gttgacctgt ttgaagttgg tatcggtttt ttccaacaag
    10381 gctttgtttt tggcctcgat cagcggacgg aacaaatcga cgattttttt agatccgtcc
    10441 acattggctt ggaagtcgct caaatcggtg tggctgtacc ggtcttcttc gccgctgatt
    10501 ttactgcccg ccacttcttc aatcagttcg gacacgccgc cgaccacctt gcccggagga
    10561 aacgccaatg cgtcgatttc tttttgcagg gcttcgacat cggtcatcag tttcgctgca
    10621 atttccttca cgccggacac gtctttttcc acccaaaggg cgtattcgat acggtggaag
    10681 ccggtaaatc cggcatcttt cgcgccgtct ttgaagtcgt cttcacgcgc atcgatgacg
    10741 gggtcgagtt cgctgaaaag ctcggcaatc ggttcgatgc gttcgtaatg gacgcgggtg
    10801 tcggcaaaca gggatttcgc cttttcaatg tcgcctgctt tgacggcttc ggtaaaggtt
    10861 ttggttttcg ccaccagctc tttaacctcg ccttgaacgt aggctttata gtcggcgagc
    10921 ggttgggaca gtttttccaa atccgcttcg ttggcggtgt ctttaaagcc gctgtcggtt
    10981 accaccagct tgccgcgcgg attggtcaaa agaccgcaag tcatttcgta ttcgcccggc
    11041 aacagggtga cggtcatttt atcggaaagt ccgggggcga tgttttcgcg ctcgtccacc
    11101 accatcacgc ctttcaggat ttcccattcg agcttgcggc cgctgttgtt tttaatattg
    11161 aacacaacct gtccgctcgg cacggtcagt tccatcggtt cgcaggcatt gtcgttgacg
    11221 gcgatactga ccgaaccgcc ctcgttggcg gtttgcgcct caccggacgc ggccggcgca
    11281 gctttctccg cctccggcgg ctggcacgcg gtcaaaccta aggcaagcat cacggacaat
    11341 gcggtcaaat tgaattttct catttcagct cctctttacg ggttaaagtt tcagacggcc
    11401 tgctgccgca caaaaaccaa gtcatgacgg gaataaggta cagcagccaa accaaggcct
    11461 cgccctgcgt cggatggtcg gtatagccga aaaatccgcc gagcagcaca cctaacggac
    11521 tgtcttcgtg caaatatttt gatgagtcga acacaatgtc ctgaagcgcg ttccaaatgc
    11581 ctgcttcgtg cagcgcgcgc agcgagccgg caagcaggcc ggcggcaacg acaatcagaa
    11641 acgcccccgt ccaacggaaa aacttcgcca gattcaggcg catcccaccc tgataaatca
    11701 acgcgccaat cacggcggca gccaaaaccc ccgctaccgc accggccggc atctgccaag
    11761 tcgggctctg tttgaatacg gcaagcagaa aaaaaacgct ctccaaacct tcgcgcgcca
    11821 cggcaagaaa cgccataccg accaaggccc atccttgtcc gctgccccgg ttcaaagccg
    11881 cctgcacaga atcctgaagc tgctgcttca tcgaacgcgc cgcctttttc atccataaaa
    11941 ccatataagt cagcatcgcg acggcaacca ggccgataat gccgacgacg aactcctgct
    12001 gcttttgggg aatctcgccc gttgccgaat ggatgccgta ccccagcccc aaacacatca
    12061 aagaagcaag gacgaccccg aaccagacct taggcatcag tttggaatgt ccggactgtt
    12121 tcagaaaacc ggcaacgatg ccgacaatga gcgcggcttc gataccctcg cgcaacataa
    12181 ttaaaaaagc gaccagcata aacgcgaacg aacaaggatg atgaataata tattatcgga
    12241 atattttcat tgcttgtaaa tacaaatgca agttattttt atctgcagta ccgcgcggcg
    12301 gaaagttccg caggctgcag ctgcgccctg tgttaaaatc ccctctccac ggctgccgca
    12361 acgccgcccg aaaccatctt tcttattact gccggcaaca ttgtccatta tgaaaaaata
    12421 cctgttccgc gccgccctgt acggcatctc cgccgccatc ctcgccgcct gccaaagcaa
    12481 gagcatccaa acctttccgc aacccgacac atccgtcatc aacggcccgg accggccggc
    12541 cggcatcccc gaccccgccg gaacgacggt tgctggcggc ggggccgttt ataccgttgt
    12601 gccgcacctg tccctgcccc actgggcggc gcaggatttc gccaaaagcc tgcaatcctt
    12661 ccgcctcggc tgcgccaatt tgaaaaaccg ccaaggctgg caggatgtgt gtgcccaagc
    12721 ctttcaaacc cccgtccatt cctttcaggc aaaacagttt tttgaacgct atttcacgcc
    12781 gtggcaggtt gcaggcaacg gaagccttgc cggtacggtt accggctatt acgaaccggt
    12841 gctgaagggc gacgacaggc ggacggcaca agcccgcttc ccgatttacg gtattcccga
    12901 cgattttatc tccgtccccc tgcctgccgg tttgcggagc ggaaaagccc ttgtccgcat
    12961 caggcagaca ggaaaaaaca gcggcacaat cgacaatacc ggcggcacac ataccgccga
    13021 cctctcccaa ttccccatca ctgcgcgcac aacggcaatc aaaggcaggt ttgaaggaag
    13081 ccgcttcctc ccctaccaca cgcgcaacca aatcaacggc ggcgcgcttg acggcaaagc
    13141 accgatactc ggttacgccg aagaccctgt cgaacttttt tttatgcaca tccaaggctc
    13201 gggccgtctg aaaaccccgt ccggcaaata catccgcatc ggctatgccg acaaaaacga
    13261 gcatccgtat gtttccatcg gaaaatacat ggcggataag ggctacctca aactcggaca
    13321 aacctccatg cagggcatta agtcttatat gcggcaaaat ccgcaacgcc tcgccgaagt
    13381 tttgggtcaa aaccccagct atatcttttt ccgcgagctt accggaagcg gcaatgacgg
    13441 ccctgtcggc gcactgggca cgccgctgat gggggaatat gccggcgcag tcgaccggca
    13501 ctacattacc ttgggtgcgc ccttatttgt cgccaccgcc catccggtta cccgcaaagc
    13561 cctcaaccgc ctgattatgg cgcaggatac cggcagcgcg attaaaggcg cggtgcgcgt
    13621 ggattatttt tggggttacg gcgacgaagc cggcgaactt gccggcaaac agaaaaccac
    13681 gggatatgtc tggcagcttc tgcccaacgg tatgaagccc gaataccgcc cgtaaaccgg
    13741 aaaacaatgc cgtctgaagc ccatccctag gcaatcgggc gcattaaggc gaagttttgc
    13801 gataccgcag gcacaaaatt cctttcttat ttgacggaat tatagtggat caaatt
//
LOCUS       DAXHKG010000046        13660 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.046, whole genome shotgun sequence.
ACCESSION   DAXHKG010000046 DAXHKG010000000
VERSION     DAXHKG010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13660
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.046"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..1166)
                     /gene="hemW"
                     /locus_tag="ACFMWP_001033"
     CDS             complement(<1..1166)
                     /gene="hemW"
                     /locus_tag="ACFMWP_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HFC5891653.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQ"
     gene            complement(1223..3748)
                     /gene="ligA"
                     /locus_tag="ACFMWP_001034"
     CDS             complement(1223..3748)
                     /gene="ligA"
                     /locus_tag="ACFMWP_001034"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HFC5891654.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLMLKADFVALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSLAQQHELGFI
                     SRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAEA
                     PAANQTQSVPLYKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSEG
                     SSVGASGKHKKQPTKWAENILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPA
                     AQYAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKSLPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            complement(3896..5182)
                     /locus_tag="ACFMWP_001035"
     CDS             complement(3896..5182)
                     /locus_tag="ACFMWP_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HFC5891655.1"
                     /translation="MIYIVLFLAVVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(5378..5950)
                     /gene="ampD"
                     /locus_tag="ACFMWP_001036"
     CDS             complement(5378..5950)
                     /gene="ampD"
                     /locus_tag="ACFMWP_001036"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HFC5891656.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVERLFANRLDPNDHPFFGLIHTLRVSSHFLIKRDGKTVQFVSCDNMAYH
                     AGVSSFGGREKCNAFSIGIELEGCDFEPFAEAQYRSLEALLDAICRHYPVTAVTGHQD
                     IAPGRKTDPGHFFDWRRIREKGFLVDRNAV"
     gene            6034..7029
                     /gene="mltG"
                     /locus_tag="ACFMWP_001037"
     CDS             6034..7029
                     /gene="mltG"
                     /locus_tag="ACFMWP_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HFC5891657.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQTAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLVEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            7089..7709
                     /gene="tmk"
                     /locus_tag="ACFMWP_001038"
     CDS             7089..7709
                     /gene="tmk"
                     /locus_tag="ACFMWP_001038"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HFC5891658.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQTREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAVIDSNLGLDEVRNSIEKVLDGHFGC"
     gene            7931..9211
                     /locus_tag="ACFMWP_001039"
     CDS             7931..9211
                     /locus_tag="ACFMWP_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HFC5891659.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYKTREDKDRMDESKQFYAIEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            9447..9650
                     /locus_tag="ACFMWP_001040"
     CDS             9447..9650
                     /locus_tag="ACFMWP_001040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891660.1"
                     /translation="MKEMKPVRYHIGDMPETSKQTASRHDDRAVGVDDDCFHDSFGQF
                     LFGCSAEATRTAPISVKRSCLFT"
     gene            9758..10792
                     /gene="lpxK"
                     /locus_tag="ACFMWP_001041"
     CDS             9758..10792
                     /gene="lpxK"
                     /locus_tag="ACFMWP_001041"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HFC5891661.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPSADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            10998..11579
                     /locus_tag="ACFMWP_001042"
     CDS             10998..11579
                     /locus_tag="ACFMWP_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HFC5891662.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            11648..11830
                     /locus_tag="ACFMWP_001043"
     CDS             11648..11830
                     /locus_tag="ACFMWP_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HFC5891663.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKA"
     gene            11827..12588
                     /gene="kdsB"
                     /locus_tag="ACFMWP_001044"
     CDS             11827..12588
                     /gene="kdsB"
                     /locus_tag="ACFMWP_001044"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC5891664.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSSLETIESLEQLRVL
                     WHGYSIAVETAKEAPAAGVDTQEDLDRVRAVFQTV"
     gene            12611..12928
                     /locus_tag="ACFMWP_001045"
                     /pseudo
     CDS             12611..12928
                     /locus_tag="ACFMWP_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            13030..13230
                     /locus_tag="ACFMWP_001046"
                     /pseudo
     CDS             13030..13230
                     /locus_tag="ACFMWP_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            13387..13479
                     /locus_tag="ACFMWP_001047"
     tRNA            13387..13479
                     /locus_tag="ACFMWP_001047"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13421..13423,aa:Ser,seq:gct)
BASE COUNT         3067 a         3384 c         3974 g         3235 t
ORIGIN      
        1 cactgcagca aatcgtttaa aaacaagcgt cctttttcgg tcgggcggaa tacggcaggg
       61 tcggtttcca gcaggccttt ttgccttgcc gtttcgattt gcgccatgat tttggcactc
      121 ggtacgcccg tgcgctcctg caacatcgcg gcgggtacgc cgtcggtcag gcgcagggcg
      181 ttcatcatga attcgaacgg caaatcttcg gcagcgacgg ttttgcgttc gacggcttca
      241 ctcggttggc tttgcattaa ggcgaggtag tcgttggggt ggcggcggcg gacggtgcgc
      301 tcgatgcggt cgggatagga aattttgccg tgcgcgcccg cgcctatgcc taaataatcg
      361 ccgaactgcc agtagttcaa attgtggcgg cactgcatgg ctggtttcgc aaaagccgat
      421 gtttcgtagt ggacaaaacc cgcgccttcc agcgcgccgt gtaccgcgtc ttcgatgtcg
      481 agggcggctt cgtcttgcgg caaacctttc ggcggcgtat gaccgaacgg cgtgttcggt
      541 tccatcgtca gatgatacgc gctgatgtgg gtcgcgcccg tagcgatagc ggtttgtacg
      601 tcgtccaatg ccgtctgaac ggtttggttc ggcagggcat acatcaagtc gatattgact
      661 ttatcaaata atttcaaggc ggtatcgata gcggttaagg cttccttacc gttgtggacg
      721 cgccccagcc ttgagagcat atcgtcgttg aaactctgta cgccgataga aagccgcgta
      781 atacccgcgt ctttaaatcc ttgaaacttc tcgatttcaa atgtccccgg attggcttcc
      841 aaggtaattt ccgcttccgg ctgcaagcgc aacagcgaac gcacgccgct taacaaacgg
      901 tcaatcgatt ccgcctgaaa caggctgggc gtaccgccgc cgaaaaagat cgtttccacc
      961 ggcctgcccc aaatattggg caattcaagc tgcaaatcgg tcagcagcgc gtcgatatag
     1021 gcggcttcgg gcaatccgtt tttcaggctg tgggaattga agtcgcaata cgggcatttt
     1081 ttgatgcacc acgggatgtg gatgtaaagc gacaggggcg gcagggcggt gagtcgggtg
     1141 cggtttggaa aggaaatggt gtgcatggtg tggttcggaa aagtgggcaa tgccgtctga
     1201 aggcggttca gacggcatgg gttcagccga gcagggtaag cagttcggct tcgctgagga
     1261 cggaaacgcc caaggcattg gctttttcca gcttgctgcc cgcggcttct ccggcgacga
     1321 cgtaatcggt ttttttggac acgctgccgg aaactttgcc gcctgcggct tcgattaggg
     1381 attgggcttg gtcgcgtttg agggtgggca gtgtgccagt taacacgaag gttttgcccg
     1441 ctacggcttt attgatgccg tctgaacctt gcgccgcctc gtcttcagac ggcatttgcg
     1501 cgaagaaggt tttcaggttt tcgagtaggg cggcgttttg tggttcgctg cgccatgctt
     1561 gccagtcggc ggggagggat ttgtcggttt gcagaccctc tatacttttg ccggcgagtt
     1621 cccataaggc ttgggctttg ttttcgctaa ttttgaaacc gggcaggcgg gcaatccagc
     1681 gttgcggttc ggcatattgt gcggcaggca ggctgacggc ttgggcttgc ggggcaacgc
     1741 ctgcggcgag cagctcgtct atcatcgcct gctgttcggc ttgggcgaag aagtgggcaa
     1801 tggaacgcgc cactaccgta ccgatgtcgg gcaggcaggc gaggacgggt tcgggggcgc
     1861 ggcggacgcg ttccaatgtg ccgaatgcct gtgccagcgt tttggcggtg cgttcgccga
     1921 cgtggcggat gccgagcgcg aacaggaagc gcgcgagttc gggcgttttg ccggattcta
     1981 tgcctgcgag gatgttttcc gcccacttgg tcggttgttt tttatgtttg cccgacgcac
     2041 cgaccgaact gccttcagac ggcatttgat ccgattcggc aacggttttg tccgccgttt
     2101 ccttcatttt ttgcagggtc ggaatatcga ggcggtagag gtcggcgaag tggcggacga
     2161 ggtcttgggc gacaagctgt tcgatttgtt tttcacccaa gccgtcgatg tccatggctt
     2221 tgcgcgaggc gaagtggatt aagccttgcg cgcgttgtgc ctgacaaagc ataccgccgc
     2281 tgcatcgggc gacggcttcg ccttcttcgc gttcgatttc gctgcggcag atggggcaat
     2341 gggtcggcag gcggtagggc ttgtagagcg gaacggattg ggtttggttt gcagccggtg
     2401 cttcggcaaa caaatcgtcc tgccgatgcc cgatgccgtc tgaaacagca acggcggttt
     2461 cctgcatcgg gcggcgttca aaaatcacac gcacgacttc gggaatcacg tctccggcgc
     2521 ggcgcacgac gacggtatcg ccgacgcgca cgtcttttcg ggaaacttcg tcctgattgt
     2581 gcagggtggc gttggtaaca gttacgccac cgacgaatac gggctgtaat cgggcaaccg
     2641 gcgttaccgc gcccgtcctg ccgatttgca cgtcaatcgc ttcgacaatg gtcagggctt
     2701 cttcggcagg gaatttgtgg gcaaccgccc aacgcggcgc gcgggagatg aagccgagtt
     2761 cgtgctgttg cgccaagctg ttgactttaa ccaccatgcc gtcgatttcg tagggcagtt
     2821 cggggcgttt ttgctgcatg tgttcgtaaa acgccaatac ttcgtcgata tttttgaaac
     2881 agccgaaatt gccattgggc agactgaagc cgagtgcttg gaaataggcg agttcctgga
     2941 tgtgttcttc cgcgacgaaa ccatcttgct ggcgggcgac ggagtagggg aaaaagtgca
     3001 gtttgcgttg cgcggtgatg cgcgaatcga gttggcgtag gctgccggcg gcggcgttgc
     3061 gcggattggc aaagggtttt tgcccgtttt cggcttgtct tttattgagg gcgacaaaat
     3121 cggctttgag catcagcact tcgccgcgta cctcgatgag ttcgggcgta ttttcgccgt
     3181 gcagccgcaa ggggatgttg gatacggttt tgatgttttg ggtaacgtct tcgcccgtcg
     3241 tgccgtcgcc gcgcgttgcc gcctgcacca atacgccgtc gcggtagagc aggctgatgg
     3301 cgaggccgtc gaatttgggt tcgataacgt attcgggttt gccgccgtcc aaaccgtcgc
     3361 gcacgcgttg gtcgaaagcg tacatttcgg catggtcgaa cacgccgttt tcatcttgcg
     3421 gggaaaaagc gttggtcagc gacagcatcg gcacttcgtg gcgcacttcg gcaaatcccg
     3481 ccaaaggctc gccgccgacg cgctgggtcg gactgtcggg cagtttgagc tcgggatggt
     3541 ttaattccaa cgcttcgagc tcgcggaata atttgtcgta ttcggcatcg ggtacgctgg
     3601 gcgcgtcgag ggtgtagtat tcgtaggcat agcggttgag caggtcggtg aggtggcgga
     3661 tgtgttgtgc ggcaaattgt tttatatcac tatcagacgg tttaagaaga ttggtaaagt
     3721 tagtgttatg ttttgagttt ggattcatga gagaaggttt tcagacgacc tttgtctgat
     3781 acgggatgaa acgggcaaag gtcgtctgaa aaatgatagg ttgaaaacag ctgaatttta
     3841 cccgaaaaaa agcggatatg ccgtaacgac atatccgctt tgattgcatt cgattttagg
     3901 agaacaggcg caatgcggtt ttgccgcccg gttcgatacc gactttgagc atctcggact
     3961 gacgagccaa tacataagtg cgcacgtctt tgagccattg ggtcgaaact tcttccattt
     4021 tgtcgttgac cagattcagg ttcaactggc cggacaggcg taccgccaaa tccataaaca
     4081 aatcgtcgaa ggttttttcg cctgccggag agtgcgggat gtcgagcagc atactgaagc
     4141 ctttgtagga ctggttgtcc aaaagggcat tggtaaacgg ctcgttgttg agcgagcaga
     4201 tggagaacat ggtcgagccc gacgtgtcgg tatagtggaa cgcgccgtcg tcttccaaaa
     4261 cgaaacccac gcccgttacg gcggaacgca gttctacgcc gctgatgctg gtcggggaaa
     4321 ccaaatggat ggcgatggtc tggtcgacgc gcgcgcagaa tgcgtccagt gcggaagcca
     4381 cttcgataaa ggcggcaagg tcggtgtgca gcgtctgacc gcccatgctt tgtgcgaatg
     4441 cgtccacctg gcggttgaat gcggagagtt cttcctgcga ggcaagtccg ttgcggctga
     4501 ctgcctgaat acccacgata aatgcctgat agcggatgcc cgggatgggt tcggcaatct
     4561 ggaaatggtc gtccatggtg cagccgacaa tctggtagcg gcagcggttg gaaaggcgcg
     4621 gcagtgcgtg cagttctttg gcttcggtca gcgcgatata ggagatgaag tcgaagcgca
     4681 cgtcaaacca gggtaattcg acttttgaca gttctttgag cgtaatcagc ggttttgcag
     4741 gtgtttgcgg aacgggtgca ggttttgccg gcgcgtcggc aggtttcggt gcggaatgtc
     4801 cggtttgggg ttcggaaacg gtgtgggcgg agttgccgat aatgccgctt tcttccaagg
     4861 cggtttcgat ttcggttttg aacggggagg cttttgcctg tttctgcttg gcgatgtaga
     4921 cggcatcctg ttcttgcagg ttgcgcatgg cggggtcttg gggttttgcc gtttttttga
     4981 ccgccggttg gggtttcggc atcatgactg acccgccgga cggtttgccg tcgcggacat
     5041 ggctggtttt gctgttgagc agggcatctt tgtcggagtg tccgaactgg tcgcgcactt
     5101 ttttgcggta ttggttttcc tgatacatgt tgtaggcgac aacggcgagg acgacagcta
     5161 gaaacagtac gatgtaaatc atggcaatca cttgttaaat ttcgggatgc aggatacgca
     5221 aagtgcgggt actgcggtta aatcgggctt gcgtttccgg cagtctgacg gaacggccga
     5281 ttataacgtt tgaattataa cgaaaattgc agggtctgac agcagtgtgt cgaaataagc
     5341 ggaaattttc cgaaatgccg tctgaaatct gtggttttca gacggcattt ctgtccacga
     5401 gaaacccttt ctcccgtatc cgccgccagt cgaaaaaatg gccggggtcg gttttgcggc
     5461 cgggcgcgat gtcttggtgc cccgttaccg ccgtgacggg gtagtggcgg cagattgcgt
     5521 ccaacaaggc ttcgagcgaa cggtattgcg cttcggcaaa cggttcgaaa tcgcagcctt
     5581 ccagttcgat gccgattgaa aatgcgttgc atttttccct gccgccgaat gaagatacgc
     5641 cggcatggta tgccatattg tcgcaggaaa cgaactgtac cgttttgccg tcgcgtttga
     5701 ttaagaaatg gctggatacg cgcaaagtgt gtatcaatcc gaaaaacggg tggtcgttcg
     5761 ggtctaggcg attggcaaaa agcctctcaa ccgcatccgt accatattcg aacggcggca
     5821 gcgaaatgtt gtgcaacaca atcagggaaa ccgtttcccc cgtttccctc gggctgaaat
     5881 tgggtgacgg ggtatggcgt atgctttgaa gccagccgtt ttgccagtgt gcttcggcgt
     5941 gattgtccat gatgttcttc ctgtccggcg ggcaatttgg gttatactgt cgcccgaatt
     6001 ttaagacgta ttccgaatgc tgggaatcct accatgttga gaaaattgtt gaaatggtct
     6061 gccgtttttt tgaccgtatc ggcagccgtt ttcgccgcgc tgcttttcgt ccctaaagac
     6121 aacggcaggg cataccgaat taaaattgcc aaaaaccagg gtatttcgtc ggtcggcagg
     6181 aaacttgccg aagaccgcat cgtgttcagc aggcatgttt tgacggcggc ggcctacgtt
     6241 ttgggtgtgc acaacaggct gcatacgggg acgtacagac tgccttcgga agtgtctgct
     6301 tgggatatct tgcagaaaat gcgcggcggc aggccggatt ccgttaccgt gcagattatc
     6361 gaaggttcgc gtttttcgca tatgaggaaa gtcatcgacg caacgcccga catcgaacac
     6421 gacaccaaag gctggagcaa tgaaaaactg atggcggaag ttgcccctga tgccttcagc
     6481 ggcaatcctg aagggcagtt tttccccgac agctacgaaa tcgatgcggg cggcagcgat
     6541 ttacggattt accaaaccgc ctacaaggcg atgcaacgcc gcctgaatga ggcatgggaa
     6601 agcaggcagg acgggctgcc ttataaaaat ccttatgaaa tgctgattat ggcgagcctg
     6661 gtcgaaaagg aaacggggca tgaagccgac cgcgaccatg tcgcttccgt cttcgtcaac
     6721 cgcctgaaaa tcggtatgcg cctgcaaacc gacccgtccg tgatttacgg catgggtgcg
     6781 gcatacaagg gcaaaatccg taaagccgac ctgcgccgcg acacgccgta caacacctac
     6841 acgcgcggcg gtctgccgcc aaccccgatt gcgctgcccg gcaaggccgc gcttgatgcc
     6901 gccgcccatc cgtctggcga aaaatacctt tattttgttt ctaaaatgga cggtacgggc
     6961 ttgagccagt tcagccatga tttgaccgaa cacaatgccg ccgtccgcaa atatattttg
     7021 aaaaaataaa ccatgccgtc tgaaaagttt gtgttttcag acggcatacc cttaccggaa
     7081 ctgcaagcat gaaaccgcaa ttcatcactt tggacggcat agacggagcc ggaaaatcca
     7141 ccaaccttgc cgtcatcaaa gcatggtttg aacggagggg gctgcccgtg ctgttcacgc
     7201 gcgagccggg cggaacgccg gtcggtgagg ccttgcgcga aatcctgctc aaccctgaaa
     7261 ccaaagccgg tttgcgtgcg gaaacactga tgatgttcgc cgccagaatg cagcatattg
     7321 aagacgtgat attgcctgca ctttcagacg gcatccatgt cgtgtccgac cgttttaccg
     7381 atgcaacctt cgcctatcag ggcggcgggc gggggatgcc gtctgaagac attgaaattt
     7441 tggaacattg ggtgcagggc ggtttgcgcc ccgatttgac cctgctgttg gatgtgccgc
     7501 tggaagtgtc gatggcgcgt atcgggcaga cgcgcgagaa agaccgtttc gagcaggaac
     7561 aggcagattt cttcatgcgt gtgcgcagcg tttatctgaa ccgtgccgcc gcctgtccgg
     7621 aacgttacgc cgttatcgac agtaacctcg gcttggatga agtcagaaac agcatagaaa
     7681 aagtgttgga cggacatttc ggctgttaat gcggcaaata ttgaaacaag cgcatccgcc
     7741 cgcgccgaaa atcaaacggc agtgccgcag gtgaaaatgg cggtatgcgc caaactttcg
     7801 gtatgataga attacgctcg gttacaaggc aggatgcgtc ggcaatatta acgaaccgcc
     7861 cgtaacatga tgacccgaaa gcgtttcgga cagtccgatt caaatctttt tctcgcaaca
     7921 ggattgacac atggaaaact cattgaaaga agccgccctc aagttccacg aattacccgt
     7981 tccgggcaaa atttccgtta ccccgaccaa atctttggcg accgacaaag atttggcgtt
     8041 ggcgtactct ccgggcgtag ccgctccttg tatggaaatc catgccgatc cgcaaaatgc
     8101 ctacaaatac accgccaaag gcaacttggt cgccgtcatt tccaacggta cggccgtttt
     8161 gggcttgggc gacatcggcg cgctggcggg caaacccgtg atggaaggta aaggcgtatt
     8221 gttcaaaaaa ttcgccggtg tggacgtgtt cgacatcgaa atcgatgaaa aagacccgca
     8281 aaaactcgtg gacatcatcg ccgctttaga gccgaccttc ggcggcatca acctcgaaga
     8341 catcaaagca cccgagtgtt tctacatcga acgcgaatta cgcaaacgct gcaaaatccc
     8401 cgtattccac gacgaccagc acggcacggc catcattacc gccgctgccg tattgaacgc
     8461 cctgcgtttt accggccgta aaatcgaaga agcgaccttg gtttgctctg gtgcgggtgc
     8521 ggccgcgatt gcctgcttga accaattgct ggatttgggc ttgaaacgcg aaaacgtgac
     8581 cgtttgcgac tcaaaaggcg tgatttacaa aacccgcgaa gacaaagatc gcatggatga
     8641 gtctaaacag ttctacgcca ttgaagacaa cggccagcgc gtattggccg atgcggttaa
     8701 aggcaaagac atcttcttgg gtctgtccgg cgcgaacctg ctgacccccg aaatgttgaa
     8761 cacgatgaac gaaaaaccca tcgtgttcgc tatggccaac ccgaatccgg aaatcctgcc
     8821 gccgctggcg aaagaaaccc gtccggacgt ggttatcggt accggccgct ccgacttccc
     8881 gaaccaagtg aacaatgtat tgtgcttccc gttcatcttc cgtggcgcgt tggatgtcgg
     8941 cgcgacgacc atcaacgaag aaatgaaacg cgcctgcgtg tatgctttgg cggatttggc
     9001 gatggaagaa gtaaccgaag aagtggttgc cgcttacggt aagaaatttg aattcggcgc
     9061 ggaatacctg attccgactc cgttcgattc ccgcctgctg ccgcgcgttg ctacggctgc
     9121 cgccaaagca gcgatggaaa gcggcgtggc aacccgtccg attgcagatt tggaagctta
     9181 cgctgccaag ctgagcgaat ggaagctgta agccgtttgc ggtttaaaat gccgtctgaa
     9241 ctgttttcag gcggcatttt gctgtcagat tgatatagtg gattaacaaa aatcaggaca
     9301 aagcgacgaa gccgcagaca gtacaaatag tacggaaccg attcacttgg tgtttcagca
     9361 ccttagagaa tcgttctctt tgagctaagg cgagccaacg ccgtactggt ttttgttaat
     9421 ccactataaa tgaaagatac tggcaaatga aagagatgaa acctgtccgt tatcatattg
     9481 gcgatatgcc cgagacttca aaacaaaccg cctcccgtca tgacgacagg gcagtgggtg
     9541 ttgacgatga ttgttttcat gattcctttg gtcaattttt gtttgggtgt tcggcagagg
     9601 caacccgaac cgcgccaatt tctgtaaagc gcagttgctt atttacctga ttggttcgct
     9661 tatcggtttg gtcttcgcgt tgtttatagg tgggtctgta tcgggtacgc atgattaatg
     9721 ccccgggctg attttgcttc gaggatttgt atcgaatatg ccgaattgtt tcaaatttca
     9781 taccgttatc gaacggcatt ggcaaaaacc ttatccggtt ttgtcttttc tgcttaagcc
     9841 gctctccggg ctgtttgcca aaattgcggc aaaacggcgg acggattttt tatcgggaaa
     9901 acggcaaagc gaaaagctgc ccgtgcctgt ggtcgtggtc ggcaatattc acgcgggtgg
     9961 gacggggaaa acgccgattg ttgccgcgct ggtgtcgggt ttgcaggaaa agggcgtcaa
    10021 ggtcggcatc atcagccggg gctacgggcg caagagcaag gcggttcatg tattgaatgc
    10081 tgagagccga gcggaagatg cgggcgatga gcctttgctg ctgttccgca aaaccggtgc
    10141 gccgacggcg gtgggcagca gccgtgcaga ggcaggcagg gcgttgctgg cggcgcatcc
    10201 cgacatcgga ctgattgtgg cggacgacgg tttgcagcat tacgccctgc ggcgagatgt
    10261 ggaaatcgcg gtgtttccgt cggcggatac ggggcgcacg gatttggatt tactgcccaa
    10321 cggcagtttg cgcgaacctt tgttgcggct ggattcggtg gatgcggtcg tcgtcagcgg
    10381 cggcaaggcg gatgcgctgt ttaggccgtc tgaaaatatg tttcacagcc gtatcgaagc
    10441 gggacggatt taccgtttga acaatccgtc cgaaatactg gacacaggcc gtctgaaaaa
    10501 tcaaaccgtc gtcgccgtgg caggtattgc caagccggcg cgttttttcg attcgttgcg
    10561 gaatatgggc attaccgtga agcgaaccgt cgcgctgcct gaccacgccg acatttcggc
    10621 ggcagatttg cccgatgcgg acgcggtcat tattacggag aaagatgcgg tcaaattttc
    10681 agacggcatt tgcaccgata atgtttgggt gttgcccgtt tgtgcgataa tcgaacctga
    10741 tttggcggcg tttgtgttgg agcggttgga agatgtaccg aaggccgtct gaaagcacgg
    10801 tttgggcgga gtgattacgg atttgaataa gaacgcctcg cgccgtcatt cccgcgcagg
    10861 cgggaatcta agtctcgaat tttcaggaat gcctaggagg cttcagaaat cccaaatctc
    10921 cggatttcca cttggacagg aatgagaaaa tcggtcgtat tttttatctg cattaatcat
    10981 tcgttaaagt attgaatatt aaactgaaaa ccttgttatt gcccttcgcc acgctggcat
    11041 tgtgcaccaa cgcttttgcc gccccgccca gcgacgcgtc gttggcgcgt tggctggata
    11101 cgcagaattt tgaccgggat atagaaaaaa atatgattga gggctttaat gccggattta
    11161 aaccgtatgc ggacaaagcc cttgccgaaa tgccggaagc gaaaaaagat caggcggcaa
    11221 aagcctttaa ccgctatcgt gagaatgttt tgaaagattt gattacgccc gaagtgaaac
    11281 aggctgtccg caatacttta ttgaagaatg cccgtgagat atacacgcaa gaagaaattg
    11341 acggcatgat tgccttttac ggttcgcctg tcggtcagtc cgtcgttgcc aaaaatccgc
    11401 gcttaatcaa gaaatcgatg agtgaaatag cagtatcttg gactgcattg tcagggaaaa
    11461 tcgcgcgaca tcatctgccc gcgtttacgg aagagttgcg gcgcatcatc tgcggcggta
    11521 aaaatcccga tgcgggctgt aaacaagccg gacaggttgg gaaaaggcat cagaaataaa
    11581 tgatagccgt ctgaaatatt gaagagggca tccgattgat tgaaccatca aacccgaaag
    11641 caaccctatg gaaaaaaaat tcttagacat cctcgtctgc cccgttacca aaggcaggct
    11701 ggaatatcat caggacaaac aggaattgtg gagccgtcag gcgaagcttg cctatccgat
    11761 taaagacggc attccctata tgctggaaaa cgaagcgcga gcgttgagcg aagaggaact
    11821 caaagcatga ctgaattcgt cgtattgatt ccggcgcggc tggattcatc gcgcctgccc
    11881 ggaaaagcct tggcggatat ccacggtaaa ccgatggtcg tgcgcgttgc cgaacaggcg
    11941 gcaaaaagta aagccgtgcg cgtcgtcgtt gccaccgacc atcccgatat tcagacggcc
    12001 tgtcaggcgc acggcgtcga agtcgtcatg acttcaaacc ggcacgaaag cggcacgacg
    12061 cgccttgccg aagcctctgc cgcgctgaag ctgccgccgc atctggtggt tgtcaacgta
    12121 cagggcgacg agccgctgat tgcccccgaa ctcatcgacc gcactgccga agtcttggtg
    12181 gaaaacaacg tacagatggc aactgcggca cacgaattgc acgatttcga cgaattgatg
    12241 aatcccaatg ccgtcaaagt cgtcctcgac aaaaaccgca acgccatcta cttcagccgc
    12301 gccccgattc cctatccgcg cgatgcgatg cgtgcaggaa aacgcgaaat gccgtttgaa
    12361 accgccgtcc tgcgccatat cggcatctac gcctaccgcg tcggcttcct gcaacgctac
    12421 accgaaatga gcgtttcgtc gctggaaacc attgaatcgc tggagcaact gcgcgtcctg
    12481 tggcacggct actcgattgc cgtcgaaacc gccaaagaag cccccgccgc cggtgtggat
    12541 acgcaggaag atttggacag ggtccgcgcc gtatttcaga ccgtataaaa caggttcaaa
    12601 gggaaaagat atgcagcaac atattgaaaa gtggcagcac ttaagccgtg aagaacagaa
    12661 aatccttgcc gaagtatggg gtctcgtgca aaacgatgat caggaggttc actatgaaat
    12721 gcttaaattg aacgcacccg acgaagccag cggcgaattt tggttcagaa tggcagaaac
    12781 actcagcacc ctgccgccca accgttccct cgaccttaga atgaacggcg gcaggctggc
    12841 gaccgccgta tccatccttt ccgtcatgat tgaagacaat cccgacatac cgcagctttg
    12901 ggcgcaaaaa attaccgcgc tcaattatag tggattaaat ttaaaccagt acggcgttgc
    12961 ctcgccttgt cgtactatct gtactgtctg cggcttcgtc gccttgtcct gatttttgtt
    13021 aatccactat atttggcaca cgggcacaaa gcccgtgccg acggtttggc acaacagccc
    13081 gacaaagcgg cagaagccaa cgaggaggaa tacctgacca aagccctgtc gcaaaacctg
    13141 ctgtcaacat tggatgccgc gcttgcacgt tttcctgaag acgcgtggtt tcaggaaatc
    13201 aaacaggatg cacaaaagca ttttgcttga ggatgtggca gtcaggaata tttccattca
    13261 ggaagaaaag aagtgcctga ttgggtataa tcagggtaaa tcttatttta tttcaaaaga
    13321 ttaatatttg ctttctgttt ttccttgacg gtatcggaaa agttgattat agttacagct
    13381 tccttaggag taatggctga gaggctgaag gcacttccct gctaaggaag catgtggggt
    13441 caacctgcat cgagggttcg aatccctctt actccgccag ataaaaaata gacgctgtgt
    13501 tttacagcgt ctattttttt atgcaatttt atagcgggtt ggtgcaaaac cagtatggta
    13561 ttgccctgtc ttgattctga attttgttat agtggattaa caaaaaccag tacggcgttg
    13621 cctcgcctta gctcaaagag aacgattctc taaggtgctg
//
LOCUS       DAXHKG010000047        13638 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.047, whole genome shotgun sequence.
ACCESSION   DAXHKG010000047 DAXHKG010000000
VERSION     DAXHKG010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13638
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.047"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(316..651)
                     /locus_tag="ACFMWP_001048"
     CDS             complement(316..651)
                     /locus_tag="ACFMWP_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HFC5891665.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(731..2860)
                     /gene="dnaX"
                     /locus_tag="ACFMWP_001049"
     CDS             complement(731..2860)
                     /gene="dnaX"
                     /locus_tag="ACFMWP_001049"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HFC5891666.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLHNMTSQQVADHLAHVLDSEKIAYEPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIINQDGAALTAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAAASCDTNAVIENTELKSPSAQTAEKETAVK
                     KPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPPWEDAPDEAQAAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNVTDAPLSEVPSENPIQATPNDEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDGAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1632..1671)
                     /gene="dnaX"
                     /locus_tag="ACFMWP_001049"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(2955..4931)
                     /gene="mutL"
                     /locus_tag="ACFMWP_001050"
     CDS             complement(2955..4931)
                     /gene="mutL"
                     /locus_tag="ACFMWP_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HFC5891667.1"
                     /translation="MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSEATEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENNSENLFDRASNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSPSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGNLQSQRLLIPVTFAASHEECAALADHAEALAGFGLELSDMGGNTLAVRAAPAML
                     GKSDVVSLARDVLNEFAQVGSSQTIEEHENHILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            5075..5260
                     /locus_tag="ACFMWP_001051"
     CDS             5075..5260
                     /locus_tag="ACFMWP_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HFC5891668.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            5271..5939
                     /locus_tag="ACFMWP_001052"
     CDS             5271..5939
                     /locus_tag="ACFMWP_001052"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC5891669.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLMRLREKTGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVSFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIVQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            5939..6655
                     /locus_tag="ACFMWP_001053"
     CDS             5939..6655
                     /locus_tag="ACFMWP_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HFC5891670.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6704..7189
                     /gene="purE"
                     /locus_tag="ACFMWP_001054"
     CDS             6704..7189
                     /gene="purE"
                     /locus_tag="ACFMWP_001054"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HFC5891671.1"
                     /translation="MTQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANENPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(7205..7363)
                     /locus_tag="ACFMWP_001055"
                     /pseudo
     CDS             complement(7205..7363)
                     /locus_tag="ACFMWP_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7372..8826)
                     /locus_tag="ACFMWP_001056"
     CDS             complement(7372..8826)
                     /locus_tag="ACFMWP_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HFC5891672.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPTEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPILGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8823..9524)
                     /locus_tag="ACFMWP_001057"
     CDS             complement(8823..9524)
                     /locus_tag="ACFMWP_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HFC5891673.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEVERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            complement(9521..10300)
                     /locus_tag="ACFMWP_001058"
     CDS             complement(9521..10300)
                     /locus_tag="ACFMWP_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HFC5891674.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            10584..11990
                     /locus_tag="ACFMWP_001059"
     CDS             10584..11990
                     /locus_tag="ACFMWP_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC5891675.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADL
                     NESPLNMQLAVISYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLHNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            12102..13628
                     /locus_tag="ACFMWP_001060"
     CDS             12102..13628
                     /locus_tag="ACFMWP_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HFC5891676.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPKYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
BASE COUNT         2768 a         3679 c         3833 g         3358 t
ORIGIN      
        1 gtgtaagttt ctgctccgac ggggttggat tcccgctttc acgggaatga cgaagtttca
       61 gacggcattt aagcggtacg gatgtgtaaa taatggtagg gtgggcttca gcctgctgat
      121 tcccgctatt cttgccgttt ttgcgttctt atcattctca ctgtttttac cgttcacgcc
      181 gaatcctgca aactgatgcc gtcattcccg cgaaggcggg aatccagacc cgtcggcacg
      241 gaaatttatc gagtaaaacg gtttcttaga ttctacgttc tagattcccg cctgcgtggg
      301 aatgacggtc gggtatcagc ggaagaagtc gcccactccg gggggtagac cttgcgtgaa
      361 tgcgcccatt gttttgtttg cggtttcttc ggctttgccc cgggcggatt tgagggcggc
      421 gaggatgagg tcttcgagca tttctttgtc gtcggcggct tcttgaatca aatcggggct
      481 gatgtcgatt ttgcgtactt cgtgcgcgca ggtcattgtg attttgacca ggccgttgcc
      541 tgcttcgcct tcgatttcgg tttcggcaag tttggcttgc gcttttttca tattttcctg
      601 catttgctgc gcctgtttca tcaggccgcc taatccggct tttccgaaca tactgaatac
      661 tcctgtctgt tttgattgaa tgagggaaac ggcaatgccg tccgaagggt tcgggcggca
      721 ttatatctgt ttatggccgg tttgctgcca attccagtga ttcgggctgc cattgcgcgc
      781 cgaatgcttg gaggattttt tgtgcggcgg ggtcggcttc gagcaatgct tgtgcttttt
      841 gcctgtcttc ggcttggacg cgcttgtcct gcatcgcggg ggtttccctg ccggcttcgt
      901 cgcgccagtc ttgggtttgc agggtgagtt gcagtccgta ggcttgggca agggtgtcgc
      961 ggattttgtc gagacgtttt ttgtcggcgg tggcgcgggc ttcggcggtc atcgccaaaa
     1021 ccatcaggcc ggtgtcggga tggtattccg tccacgcgga gtgttgcgcc ggcatttgcg
     1081 ccgcgccgag tttgcgggcg aaatgccgga cgatggctgc ccagttttcg gtggaaaatt
     1141 cgggcggcgg ggcggacggc gtgttgtttc cgccgatgcc gcctgcttct gcttcttcgt
     1201 ccgcgcctcc gcctgcggta tcggcagggg cggcgtgttc ccaatcgggc ggcgggattt
     1261 ctgcgccgtc ttctacgggg cagtcattat ccggaaagcc gtaaccgtag aaaggttctg
     1321 caggggcttc gtgtgcaaat gtttccgttt caacggcttc atcattcggt gttgcctgaa
     1381 tggggttttc agacggcact tcggacaagg gggcatcggt tacgttgtcg gctgccttgt
     1441 tcttggaaac ttggttttcg ggcggcgttt cggcttcgga tgccgtctga atgctttttg
     1501 ccgacgtttg cgccgtgccg gctgcggctt gggcttcgtc tggcgcgtct tcccaaggcg
     1561 gaacatcgtt gttttcttga ttggaaacgg gtccggcagt tttgccttca gacggcattg
     1621 ccgctgcgga tgccgtctga acgggtgttt gggcggtttc tgcttcaggg cgcggttggg
     1681 gcttttttac ggcggtttcc ttttcggcgg tttgtgccga tggggatttt agttcggtat
     1741 tttcaatcac ggcgtttgta tcacacgaag ctgccgccaa gggcgcaaac gccagcatac
     1801 gcagcagggt catcataaag ccggcgtatt cgtcgggggc gaggctcagg tcgcgtttgc
     1861 cgtggacggc gatttggtag taaagctgga tttgttcgcc gcttatggtt tgggcgaggc
     1921 ggtgcaaaat atcggaatcg gggtcgtcgt gcgccaaggc ggagggcacc gcctgtatca
     1981 gggcgaggtg ttgcagcagt atggcaagtt cgcccaaggc gttgtcaaag ccgacggcac
     2041 acgccgccat ttcctgcgct ttggcggtca gggctgcgcc gtcttggttg atgatgcctg
     2101 tcaagagttc gtaaaggtat tgtttgtcaa ccgcaccgat catttggcgg acgtcttgtt
     2161 cggcaacgct gcccgaaccc atggcgatgg cttggtcgag caggctcaag gcatcgcgca
     2221 tcgatccggc ggcggcgcgt cccaaaagtt gcagggcagg gggttcgtag gcgatttttt
     2281 cgctgtcgag gacgtgggcg aggtggtcgg caacctgctg cgaagtcata ttgtgcaaga
     2341 caaattgcag gcagcggctc aagacggtaa cggggacttt atgcggatcg gtcgtggcaa
     2401 ggatgaattt gacgtgttcg ggcggctctt ccagcgtttt gagcatagcg ttgaacgcgc
     2461 ttttggaaag catatgcact tcgtcgatga tatagacttt gtatttgccg gcagtcggtg
     2521 catattgggc gttttccaat acttcgcgga tgttgtcgat gcctgtgttg gaggcggcgt
     2581 cgatttcgag caggtcgaca tagcgtccgg catcgatttg ggtgcagctt tcgcacacgc
     2641 cgcaaggttc gccgtgttgc gcgttttcgc agttgaggct tttggcaagg atgcgggcga
     2701 tggtggtttt gcctacgccg cgcgtaccgg tcagcaggta ggcgtggtgc agcctgcctt
     2761 cgtccaaggc gttttgcaag gctttgacga cgtgttcctg accgactaag tcggaaaagg
     2821 ttttgggccg ccattttcgg gcgagaactt gataggccat gtttttctct tggtttcggt
     2881 cgtgatgttt ctgtcggtgc gtcggaatgc cgtctgaacg gcggcttcgg gcggcgtatt
     2941 ctagcacttt cggtttattg tccgcgcaag aacagtgcgt ccaattcttt caaagtcagt
     3001 ttgacccaag tcggcctgcc gtggttgcac tggttgctgc gcggcgtatt ttccatatcg
     3061 cgcagaaggg cgttcatttc gggcagggtg agccggcggc cggcgcggat cgagccgtgg
     3121 caggacatgg tggcgaggat gtggttttcg tgttcctcga tggtttggct gctgccgact
     3181 tgggcgaatt cgtttaatac gtcgcgggcg agggagacga catcggattt gcccaacatt
     3241 gcgggtgcgg cgcggacggc gagggtgttg ccgcccatat cggacagttc cagcccgaag
     3301 cctgccagtg cttcggcgtg gtcggcaagg gcggcgcatt cttcgtggga cgcggcaaag
     3361 gttacgggaa taagcaggcg ttggctttgc aggttgccgt tttcctgacg ttggcgtttc
     3421 attttttcgt agttgacgcg ttcggcggcg gcgtgcatat cgatgagcaa caggctgtct
     3481 tcggcttggg caagaatgta gatgccaagt aattgggcaa tggcgaaacc gagcggcggc
     3541 agttcggatg gggacgggat gccgtctgaa agcggcgtat ctgtttgggg agcaggcgtt
     3601 tcagacggca tattgccgaa acgtgcctgc tcgaatcggc ttaactcaag gtcgatgtcg
     3661 tcggtttttt tgtaaagttc ggcgtaagta ttcattgccg cgcggctttc gcgcagggac
     3721 aggctgcgtt gttgcggcgc atatgcggac tgatagggca tgggcgcggt tttgcctgat
     3781 gaaccaaagg cattgtgtgt atctgatttg ttgcctgtcg ggtagttgga tgcgcgatca
     3841 aacagatttt cgctgttgtt ttcagacggc attggtgcag gcgtaacgcc ggtaatgtca
     3901 tgcaacactt cgcctgcgtt gctgacgctt tcggtcaggt cggcgcgtgt gtcggcaagg
     3961 gctttgttga gcgtgtggaa cacaagttgg tgcacctgct gactgtcgcg gaagcggatt
     4021 tcggttttgg tcgggtggac gttgacatcc acggcttcgg gcggcaggtc gagaaagagg
     4081 acgaaagcag gcgtcagtgc gttgtgcaat acgtcgcggt atgcctgctt gacggcatgg
     4141 agcatgactt tgtcgcggac aaaacgatgg ttgacgaagc agtattgttt gtcggtttta
     4201 cctttggcga aagtcggttt ggcaatcgcg ccatagagcc gcaatgcgcc gttgtcgctg
     4261 tcaatttcca atgatgccgt ctgaaaatca tcgccgacaa tggcggcaat ccgttcatgc
     4321 aggctttgtg cagggagttt gaacacttgt ttgccgtcgc gtttgagcga gaaggcaatg
     4381 tgcggatgcg ccagcgcgag gcgttcgagc atagtggcgc agtgggcgta ttcggtggct
     4441 tcagacttga ggaacttgcg ccgcgcaggg gtattgaaga agagttcggc ggcttcgatg
     4501 gtggtgccga cggggtgggc ggcggcggtg gggctgctga gtttgccgtc ttcggctttg
     4561 acttgggttg cgtgcgaact gtcttcttga cggctggtca gggtcaggcg gctgacggag
     4621 gcgatgcttg ccaagccttc gccgcgaaag cccatgctgg caacgtgttc caaatcgttt
     4681 aaggttttga ttttgctggt agcgtgtcgg tggagcgcaa gctcgatgtc gtcggggtgg
     4741 ataccgccgc cgttgtcgct gacgcgaatc aggcggatgc cgccgcccgc cagctcgaca
     4801 tcaatcgccg ttgcgcctgc atcgatactg ttttcaacaa tttctttcaa ggcgttggca
     4861 gggcgttcga ctacttcgcc ggcagcgatt tggttgacaa gatggtcggg cagggcggca
     4921 attcgggaca tggcatgggc ttccgtttca aaaaacgctt tattctataa taaaacccct
     4981 tatctttctg cccgtattct tgataaaagc cgtttatccc gtttggaaaa taccagtata
     5041 atcacgccgt atcccgtaaa attggagcgc aaagatgtac cactaccaat ccgaagccac
     5101 acaattcctc aaccgcctga ttgaagaaaa acctgagttg gaacagcagc gtttggaaaa
     5161 ccgggggctt ttgtgggatg tcgaactcaa tcccgaagaa caggaaaact tcgaggcggc
     5221 aaaagtagcg aaaaaacctt atacctatta ccaagactga acccgccgaa atgacgaccc
     5281 atctgtccaa tgtcgccccc gacctgcaaa actatttgaa cgccatcggc gaacctgaac
     5341 atcccgtttt gatgcggctg cgcgagaaga ccgggcatca ccgtatgggc aaaatggcga
     5401 ttgcgcgcga acaggcggcg gttttggttt ggctggcaaa gctgatccgt gcggaaaaat
     5461 atctggaagt cggcgtgttt actggataca gcagcaccgc gcttgcattg gcgttgcccg
     5521 aacacgggcg gattaccgcc tgcgacatca atgtaagctt taccgatacg gcgcgtcagg
     5581 tttggaacga ggcaggtgtg gcacataaaa tcagcctgca cctgcaaccc gcattgctga
     5641 cattggatga tttgattgta cagggtgaag ccggaagcta cgatttggca ctgatagacg
     5701 cagacaaacc gcccacgccg caatatttcg agcgttgcct caaactcgtc cggcaaggcg
     5761 gcatcattgc cattgacaat attttgttga acggaagggt gatgcgcgaa gcggcttccg
     5821 acgcgccgcc cagtgtcggc atcctcaaag atttcaatca aaacctgccg aacgacccgc
     5881 gcatcgtccc catcaccctg cccgtcggcg acggtttgac cctgcttctg aaaaaataat
     5941 gaagaccaaa ttaccgcttt ttatcatttg gctgtccgta tccgccgcct gttcttcccc
     6001 tgtttcccgc aatattcagg atatgcggct cgaaccgcag gcagaggcag gtagttcgga
     6061 cgctattccc tatcccgttc ccactctgca agaccgtttg gattatctgg aaggcacact
     6121 cgtccgcctg tcgaacgaag tggaaacctt aaacggcaaa gtcaaagcac tggagcatgc
     6181 gaaaacacac ccttccagca gggcatacgt ccaaaaactc gacgaccgca agttgaaaga
     6241 gcattacctc aataccgaag gcggcagcgc atccgcacat accgtcgaaa ccgcacaaaa
     6301 cctctacaat caggcactca aacactataa aagcggcagg ttttctgccg ctgcctccct
     6361 gttgaaaggc gcggacggag gcgacggcgg cagcatcgcg caacgcagta tgtacctgtt
     6421 gctgcaaagc agggcgcgta tgggcaactg cgaatccgtc atcgaaatcg gagggcgtta
     6481 cgccaaccgt ttcaaagaca gcccaaccgc gcccgaagcc atgttcaaaa tcggcgaatg
     6541 ccaatacagg ttgcagcaga aagacattgc aagggcaact tggcgcagcc tgatacaggc
     6601 ttacccgagc agcccggcgg caaaacgcgc cgccgcagcc gtacgcaaac gatagttttt
     6661 ccatttttcc gctttttacc ccatccgcac caaggagaga tttatgacac aaatcggcat
     6721 catcatgggc agcaacagcg attggcccgt tatgcggcag gcagcgcagt ttcttgaaga
     6781 gttcggcgta gaatatgagg cgcgcgtcgt ttccgcacac cgcactccgg atttaatgtt
     6841 ccaatacgcc gaaaccgcac gggcgcgcgg catcaaagcc atcatcgcgg gtgcgggcgg
     6901 cgcggcgcat ttacccggca tggttgccgc caagaccacc gtccccgttt tgggcgtacc
     6961 cgtccccagc aaatacctgc gcggcgaaga ttcgctttta tcgattgtac aaatgcccaa
     7021 aggcgtaccc gtcgccacat tcgccatcgg cgaggcaggc gcggcaaatg ccgcattgtt
     7081 cgccgtttcc atgctggcca acgaaaaccc cgaactggcg caaaaactgg cagacttccg
     7141 agccaaacag gaacaggctg ttttgagtat ggaattggaa cagatttaaa acccgccgtc
     7201 cgcgaatata tagtggctta aatttaaacc agtacggcgt tacctcgcct tgccgtacta
     7261 tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatacaaatg
     7321 ccgtctgaag ccctgtttcg ggtttcagac ggcatttttg caaacaactg tttatgcctg
     7381 ttctttttgg cgcatttttt ctgccattag ttcgtgcagg gttttcttcg ccggtttcat
     7441 cggcacgcgg ttttgcgtcc aacccaactg tttgcgcggg gtcaggttgc ggaacttggt
     7501 ggctgcccaa ccgaaggcgc ggtaggtttt gctgccgctg aaaataccgt tgaatgtgcg
     7561 ccacgccatt tgttcgccga aggtatgcga tgcgccttgc cctaggatgg ggtgtggcac
     7621 ggtttcggtc ggcgaacgtt gcgcttcaac gcgcaaacgc tgcatttgtt cggtaatcgg
     7681 gatgcgtacc ggacagactt ccacacacgc gccgcacatg gtacaggcgg ttggcaagtc
     7741 gcgggtggca tccagaccca acaggtgagg ggaaataatc tcgccaatcg ggccgggata
     7801 ggttgtgccg tatgccgcgc cgccgatacg ggtataaacc gggcaatggt tcatacacgc
     7861 gccgcaacgg atacattgca aggtgcggcg catttggtct tcggcatagg cttggctgcg
     7921 accgttgtca agcaggacca agtgcatttc ttgaggaccg tccagctctt cgctacggcg
     7981 cgggccggta atcatattga aataagtggt aatgttctga ccaatggcag aacgcggcag
     8041 caggctgtac aagggtggga tgtcggacaa tttcgccacc actttttcaa tgccggtaat
     8101 agcgatatgc acgggcggta cggtggtact caagcgaccg ttgccttcgt tttccaccag
     8161 acacagcgta cccgtttcgg caacagcaaa gtttacgcca ctcaaaccga catcggcagt
     8221 gctgtaaata tcgcgcaggg ctttgcgggc gaagccggtc agttggtcca cgtcgtccgt
     8281 aagcggagtt ccaaggtttt ggtggaacag ttcactcacc tgttctttgg ttttgtgaat
     8341 ggcgggcatc acgatatggg tcggtttttc gcctgccatt tggacgatga actcgcccaa
     8401 gtcgctttct accgctttaa tgccttttgc ttcaagataa tggttcagct cgatttcctc
     8461 gctgaccatc gatttgcctt tgaccatcag cttgccgttt ttggctgtga tgatgtcgtg
     8521 gataatttgg caggcttcgg tcggggtttc tgcccagtgc actttcacgc ccaacttagt
     8581 caggttttct tccagctgct ccagcagggc tggcaattta gacaatgagc gctgacggac
     8641 gtgttcgcac aaatcgcgca ggctttgcag ctcttcttcg tcggtcaaaa cggctttgcg
     8701 tttggtcatc agcatatcca tcgcggtacg caggcttttg cgcaaaggct tgtcttgaag
     8761 ggaaattgcg gcgttttgct tgaaagtttc cggcttcatg tgaaatttga tggtttgcgt
     8821 agtcatgcgt tttcctccaa atcggcaggg gaaatgtggt cgggcaggat ggcgaggatg
     8881 accaaatcgc gcgggccgtg cgcgccgtaa gcaagcgtca gttggatgtc tgcggttttg
     8941 gacgggccgg aaatcaggaa tacattggtc ggcataccgt tttccaccag tttttcgcct
     9001 tcgacggcat tatgaaactc gttgtacatc ttggacgtat cgaacaggca gaaatgcacg
     9061 ggcggaacga gactcaaagt acgcggttct tcggggctgg aaaacagcat cagcgtgccg
     9121 gtgcgggcga tgccgcattg cgcgccgctg aagcccgcat cgatgttcgt gaaaaactcg
     9181 gttttccaag tatcgatttc gcgctcgaag gcaatcggtt cgatattgct gtccgccaat
     9241 gcggcacggg caatttgtcc gtgttcggtc gccaagggca gcaggatgtt tttcaaaccc
     9301 ttgccttctg ccgcttcgcg gaaaacctgc atccaattgc ttttcgtcac ccaataaatt
     9361 tcggttttga ccgcacgcat agcggcagcc caatgtttca gacgctcaac ttcgctgccc
     9421 caagaaacac ccatttcacg gtaataatca aaaaccgcag gttcttccat cggcaatgcg
     9481 tcggcttttt tcagttttgc caaaatattt tcgcgcgcgc tcatgctttg cctccggtac
     9541 gttccaacaa gaaggatgcg atatgtttcg gacgcggcat attcggttcg tccttagcaa
     9601 ttttgccgcc gatgttcatc atacagccgc agtccgcgct gatgatttcg gttgcgccgg
     9661 tttctttcag cgcggcgact ttgtcggtta ccatcgcgcc ggaaatatcg gcttgtttga
     9721 cggagaatgt gccgccgaag ccgcaacatt cgctttcgtg gtcgtggacg atgcgttcga
     9781 cgttttccat accgtcaatc agttgccagc ccgagagatg gacattcatt tcgcggcggg
     9841 cggcgcagga agtgtgaacg gcgactttga gcggttcgcc cttgtcttcg ggtttgaaac
     9901 cgatggcaag caggaaatgg gtaaactcga tgatgcggcc ggcgcaatcc acagcccttt
     9961 cctcgtactc gctgccttta aacagcgtcg gccaatggtg cttcatcata ccgccgcacg
    10021 aaccggacgg tacgacaatc ggccactcct cggggaaaag gtcgagttgc gctctggcga
    10081 catcaaaggc ttcggtcgga tggccggatg aataggcggg ctgaccgcag cagctttgcg
    10141 ccatcgggaa atggacgcgt atgccctgtt gctcgattag ggtaatggca tccatgcctg
    10201 cttcgggcat aaaaagatca aggacgcaag tgccgaaaaa atagacatcg gtcggattgc
    10261 tgtcgtatcg gatgattttt gggggaatgg ttgcgctcat gttttttgat aacgggaaac
    10321 ccgttttttt ctgtagaaag gtaagcgttt actttaagta attgactgtt gcgggtcaag
    10381 tctaatttta aaaaataatc cggtttttct tacaaactac cccataacgc ttactgtacc
    10441 ttaatctgat agttttcgat aataattatc attacaatgc aatgccggtt cgtttgcttg
    10501 tgaacattca agatgccgac tctgacggca ttcagacagc atctgaaaac aataacggca
    10561 caaggatggg gtacaatcgc tctatggaaa aaaacaccct atccgcccgc gcaccatccc
    10621 cttggctgcc gcttctgctg gcaattgcca tttttatgca gatgttggat gcgaccattt
    10681 taaataccgc actgcctgaa attgccgccg acctgaatga gtcgccattg aacatgcagc
    10741 tggcggttat ttcctacacg ctgacggttg ccctgctgat tcctttgagc ggttatttgg
    10801 cggacaggtt cggaacgaaa aaagtctttt tcggttcgat tgccgttttt atgctcggat
    10861 cggcattgtg cgccgcatcg ggttcgctgt ttgaattgac gctttcccgt gtcgttcagg
    10921 gcatcggcgg ttcgatgctg gttccgatac cgcgtctgac catcttgcgt gtgtacgaca
    10981 agtccaagct gcacaacgcc atcaattatg cggttatgcc cgcattaatc ggaccggttt
    11041 tagggccttt ggcgggcggt tatctggtcg aatacgcttc gtggcactgg attttcctgc
    11101 tcaacctgcc catcggtctt ctgggtttca tattgggacg caacatcatg cccgatatta
    11161 aaggcagcaa tatctcttta gacttcaaag gctatctgat tttttctgcc gccgcgtgcc
    11221 tcttgttact ttcggcagaa agcctgtcgc acgcgctgcc tccgtatttt gcactgttgc
    11281 cgctgtgcgg cggactgctg tttgcacgcc gttatttccg acatatgaaa accgcgtcca
    11341 aaccgattta ttccgccgac ctgtttctga tacgcacttt ccgtctagga ctggcgggca
    11401 atctgttcag ccgtctcggc atcagctcga ttccttttct gatgcccctg atgtttcaag
    11461 tcgctttcgg cttcggcgca agcctgtcgg gttggctggt cgcccccgtc gccctgtctt
    11521 cgctgctggt caaaccgctg attgcaccgc tcatgaaacg tttcggctac cgcacggtac
    11581 tgctttggaa caccaagctg cttgccgcct tcatcatgct gctcgcccta cctgatggaa
    11641 actcgccgct gtggatttgg attttcctct cgctggcgat cggcgcgtgc aactccctac
    11701 agttttctgc catgaacaca ctgaccctcg ccgatttgcg cccgcaacag accggcagcg
    11761 gcaacagcct gatggcggtc aaccaacagc ttgccatcag catgggcatt gttgtcggcg
    11821 cattaatcct taaaaactgg acatttctga taccggcttc ttcaggtctg cattccgcct
    11881 tccgtatgac cctgctcagt atcggcggca ttacccttgc ctcgtcgttg gttttcaagc
    11941 gtctgcacgt ttcagacggt gcaaacctga cacggaacac accgtcctaa agcggtccgc
    12001 acgcaaaact tttacccgtt tcaacgtttg gattatgatt ccgcacttcc atgcgcacca
    12061 accccaaaac acaggcaatg ccgtctgaaa ccatatccct gatgaaaaca cgcagcctaa
    12121 tttccctttt atgcctcctt ctctgttcat gttcttcatg gttgccccca ctggaagaac
    12181 ggacggaaag ccgtcatttc aatacttcca aacccgtccg cctggacaac atcctgcaaa
    12241 tccggcacac ccctcatacc aacgggctat ccgatatcta tctgttgaac gacccccacg
    12301 aagcctttgc cgcccgcgcc gcccttatcg aatctgccga acacagcctc gatttgcaat
    12361 actacatctg gcgcaacgac atttccggcc gactgctgtt caacctcgtg taccttgccg
    12421 cagaacgcgg tgtgcgcgta cgcctgctgt tggacgacaa caacacgcgc ggattggacg
    12481 acctcctgct cgccctcgac agccatccca atatcgaagt gcgcctgttc aaccccttcg
    12541 tcttacgaaa atggcgcgca ctcggctacc tgaccgactt cccccgcctc aaccgccgca
    12601 tgcacaacaa atcctttacc gccgacaacc gcgccaccat actcggcgga cgcaatatcg
    12661 gcgacgaata cttcaaagtc ggtgaggaca ccgttttcgc cgacctggac atcctcgcca
    12721 ccggcagcgt cgtcggcgaa gtatcgcacg acttcgaccg ctactgggca agccattccg
    12781 cccacaacgc cacgcgcatc atccgcagcg gcaacatcgg caagggtctt caagcactcg
    12841 gatacaacga cgaaacgtcc agacacgcgc tcctgcgcta ccgcgaaacc gtcgaacagt
    12901 cgcccctcta ccaaaaaata cagacaggac gcatcgactg gcagagcgtc caaacccgcc
    12961 tcatcagcga cgaccctgca aaaggactcg accgcgaccg ccgcaaaccg ccgattgccg
    13021 ggcggctgca agacgcgctc aaacagcccg aaaaaagcgt ctatctggtt tcaccctatt
    13081 tcgtccccac aaaatccggc acagacgcac tggcaaaact ggtgcaggac ggcatagacg
    13141 ttaccgtcct gaccaactcg ctacaggcga ccgacgttgc cgccgtccat tccggctatg
    13201 tcaaataccg aaaaccgctg ctcaaagccg gcatcaaact ctacgagctg caacccaacc
    13261 atgccgtccc tgccacaaaa gacaaaggcc tgaccggcag ctccgtaacc agcctgcatg
    13321 ccaaaacctt cattgtggac ggcaaacgca tcttcatcgg ctcattcaac ctcgaccccc
    13381 gttccgcacg gctcaatact gaaatgggcg ttgttatcga aagccccaaa atcgcagaac
    13441 agatggagcg cacccttgcc gataccacac ccaaatacgc ctaccgcgtt accctcgaca
    13501 ggcacaaccg cctgcaatgg cacgatcccg ccacccgaaa aacctacccg aacgaacccg
    13561 aagccaaact ttggaaacgc atcgccgcaa aaatcctatc cctgctgccc atagaaggtt
    13621 tattatagaa atgtagcg
//
LOCUS       DAXHKG010000048        13584 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.048, whole genome shotgun sequence.
ACCESSION   DAXHKG010000048 DAXHKG010000000
VERSION     DAXHKG010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13584
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.048"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(64..624)
                     /gene="sodC"
                     /locus_tag="ACFMWP_001061"
     CDS             complement(64..624)
                     /gene="sodC"
                     /locus_tag="ACFMWP_001061"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HFC5891677.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1041..2081)
                     /gene="mutY"
                     /locus_tag="ACFMWP_001062"
     CDS             complement(1041..2081)
                     /gene="mutY"
                     /locus_tag="ACFMWP_001062"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HFC5891678.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIIRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPTHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2244..3285
                     /locus_tag="ACFMWP_001063"
                     /pseudo
     CDS             2244..3285
                     /locus_tag="ACFMWP_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3543..4181)
                     /locus_tag="ACFMWP_001064"
     CDS             complement(3543..4181)
                     /locus_tag="ACFMWP_001064"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HFC5891679.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     HNSGIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPEYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4362..6197)
                     /gene="edd"
                     /locus_tag="ACFMWP_001065"
     CDS             complement(4362..6197)
                     /gene="edd"
                     /locus_tag="ACFMWP_001065"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HFC5891680.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYASMPKSIKIEMLQDTVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKAGNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLSAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLIDEAE
                     WNAREVEHIDLGANQQGCGRELFAGFRSLTGGAETGAMSFGGEFA"
     gene            6713..8158
                     /gene="zwf"
                     /locus_tag="ACFMWP_001066"
     CDS             6713..8158
                     /gene="zwf"
                     /locus_tag="ACFMWP_001066"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HFC5891681.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAARGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
     gene            8438..9133
                     /gene="pgl"
                     /locus_tag="ACFMWP_001067"
     CDS             8438..9133
                     /gene="pgl"
                     /locus_tag="ACFMWP_001067"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HFC5891682.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            9114..10100
                     /locus_tag="ACFMWP_001068"
     CDS             9114..10100
                     /locus_tag="ACFMWP_001068"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HFC5891683.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            10150..10998
                     /gene="hexR"
                     /locus_tag="ACFMWP_001069"
     CDS             10150..10998
                     /gene="hexR"
                     /locus_tag="ACFMWP_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HFC5891684.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            11119..12765
                     /gene="pgi"
                     /locus_tag="ACFMWP_001070"
     CDS             11119..12765
                     /gene="pgi"
                     /locus_tag="ACFMWP_001070"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC5891685.1"
                     /translation="MKHFHDLPAWPKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDESAVAKHFVAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPAILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLIRLYLQTNRK"
     gene            12779..13330
                     /locus_tag="ACFMWP_001071"
     CDS             12779..13330
                     /locus_tag="ACFMWP_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC5891686.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHVCSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         3299 a         3436 c         3688 g         3161 t
ORIGIN      
        1 gctaaatatc tagcaaaaaa gtgcggtcaa aattcaccgc acttttcgtt tcgaacaatc
       61 gaattattta atcacgccac atgccatacg tgggccgcca ccgccaagtg gagctggatg
      121 atcggagtga ttatcaccac ccgtgtggat cataatagag tgaccgcgaa catcatctaa
      181 atgtttaaga cgtggtgcta aaacaggatt tgttgctgtg ccatcatgca atacagttaa
      241 tgcaggtaaa tcacctaagt gtgcatcatc ttgccatggg taaccatgtt gttttgcacc
      301 tttaggatcc cagtgaccgc ctgcgcctaa accagctgtc aatttacctt ctttttcttt
      361 tggctcacag cttgggtttt catggatgtg gaaaccatgt aagccttcgc ttaatccttg
      421 taaatcaggg gtaaacacaa gaccatagtt agattcagta atagtcactg tacccacatc
      481 tttgttaccg tttactggat caagttgttg cactttcact tcaatagaag cacctttagg
      541 tatcgtatta tgctcgtgtg cttgcgcaac accaactgaa catactgcac taaccgctag
      601 tgctaataag gttttcatat tcattgcaat ctcctttatt gcagtaaaaa ctcgcgacta
      661 ttttagtcaa ttttgtttta aaagccgata aatttttacg aaaattttac attaattgtt
      721 atttgcagaa aattagaacc cgttatcacg tcttggataa atgccaaaac cattgtgatt
      781 cagagaatta aaaagaaaaa tttcggaatc ctcatccttt tctgaaacct gattgcggta
      841 tccatggctt tgtctttgtc atttaagttt gtgttcatgt ttttgacctt ctttgctttt
      901 taaatccttt ttaaattgcc gacttcttcc gttccaaatg tcccatttga acattatccc
      961 gccgcctaaa atacgaccca aattcatcgg ttgttcttgc tgcgatacct gcaaacaaca
     1021 gttcaatggg tttattttgt ttattctaac ctattaccgt ttaaataaat ttccaaaggc
     1081 ttgggcaggc cgtaatcttt caaatgcgtc ggctttatcc aaatgccgtc tgaagggctt
     1141 tcagacggca tttgtccttc aaacggcgta atcatcagca accggtgcgt cagccggtgg
     1201 gtcagggcgg tttgttcgtc catatctgcc atggtcaggg agaatttggc ggcaaagtcg
     1261 gaaagcccgt tcaaactttc aaaacacggc acgcaataca gcccgcccca aatgcctttg
     1321 gcggggcgtt tttccagcaa aatcgcgccg ttccggttgc ggataatcag ccagtaaagc
     1381 ggcagggtcg gtacttcggc ggcggttttt ttgcgcggca gctcggcggt gcggttttgc
     1441 ttttttgctt cgcagatgtc cgccatcggg cattggtggc acaagggttt cgtccgtttg
     1501 cacacggttg cgcccaaatc catcaaacct tgtgtatagg caggcatatc ggcgttttca
     1561 gacggcagca ggctttcggc aagtgtccag agcgagtttt caaatttttt gtcctgcgga
     1621 ttgccgtcgc gggcgaacac gcggcagagt acgcgtttga cgttgccgtc caaaatggtt
     1681 tcgcggcggt tgaaggagaa ggcgcaaatg gcggcggcgg tgcttctgcc tacgccgcag
     1741 agcgtttcca agtctttgcg ttccgatgga aacgtgccgc cgaattgcct gacgacttgt
     1801 tgcgcggctt tgtgcaggtt gcgcgcgcgg ctgtaatagc ccaagcccgc ccacaacgac
     1861 aacacttcgt cttgcggcgc ggcggcaagc gtctgaacgg tcgggaattt ttctaagaaa
     1921 cgcggatagt agtccaacac ggtggcgacc tgcgtttgct ggagcatgat ttcggaaagc
     1981 cagacgcaat aagggttttt gacctgccaa gggaggtggt ggcgaccgtg ttgtttttgc
     2041 cagcggatga gccgttcgga gaaggggatg ggtgtgttca ttaatatcaa tcggtggttt
     2101 tatttatatt taaaacagta tgttattgta taacattgtg aaaataattc ttattgactt
     2161 attttttgta ggggtatata actcatataa agaaacttta ttgcggtatt gaaattattt
     2221 atcaacaagc aaggagtatc agcatgaaag caatggttta tcacggcgca aacgacatcc
     2281 gttttgaaga aaaaccccgt ccgcagatta tcgatccgac cgatgcggtg gtgaaaatcg
     2341 tcaaaaccac gatttgcggt accgatttgg gtatttggaa aggcaaaaaa aaccgaagtc
     2401 gccgacggtc gtattctcgg tcatgaaggc atcggtattg tagaagaagt cggcgaggct
     2461 gtaaaaaaca tcaaagtcgg cgataaagtc attatttcat gcgtcagcaa atgctgtact
     2521 tgcgacaact gcaaaatcca actttattcg cattgctgca acggcggctg gattttgggc
     2581 tacatgattg acggcacgca ggcagaatac gtccgcacgc cttatgccga caacagcctc
     2641 gtgccgctgc ccgacaacgt caacgaagaa gtcgccctgt tgttgagcga cgctttgccg
     2701 accgcacacg aaatcggcgt gcaatacggc gatgtcaaac ccggcgacac cgtattcatc
     2761 gcaggtgccg ctcctgtcgg tatgtccgcc ttgttgaccg cccaactgta tagccccgcc
     2821 gccattatcg tgtgcgatat ggacgaaaac cgtttgaaac tggcgaaaga gttgggcgcg
     2881 acccatacca tcagccccgc ctcaggcgat gtctccaaac aagtttttgc cattgtcggc
     2941 gaagacggcg tagattgtgc catcgaagcc gtcggtattc ctgcgacttg gaatatgtgc
     3001 caagacatcg tgaaaccggg cggtcatatc gccgttgtcg gcgtacacgg ccaatccgtt
     3061 gatttcaaac tggaaaaact ctggattaaa aacctcgcca tcactaccgg tttggtcaat
     3121 gccaatacta ccgaaatgct gatgaaggca atttccagca gctcagtcga ttacaccaaa
     3181 atgatgaccc accatttcaa attcagcgaa ttggaaaaag cctacgacgt gttcaaacac
     3241 gccgccgaaa accaagcgat gaaagtggtt ttggaagcgg attaatcggc cttgaatcag
     3301 ttgttttttt aagcggatgc cgtctgaatg cgtttcagac ggcatttttt cagccgcgta
     3361 gtatgggctg tccggctgct gtcgaatgaa ctgaacgtta tttttattat gcggaaggcg
     3421 gatgggcatt ttaggggcgg tatgtctgat cagtgctgcc gtgtatgccg actgtgccct
     3481 caatcggcaa aatgccgtct gaaacgggaa aggtttttca gacggcattt ttacgatgcg
     3541 aatcaggctt tgggtttcaa cgccgccgct tctttggcga ggcgggtgat ggtgtcccag
     3601 tctttgtttt tcacggcttc tttcggtgtc agccaagagc cgccgacgca caggacgttg
     3661 ggcagtgcca agtactcggg cgcggtggcg aggctgatgc cgcctgtcgg gcagaagcga
     3721 acatcggcgt aaggaccgta cagggctttg agcatggctt tgccgccaac gacttcggca
     3781 gggaagagtt tgagggtgtc gatgccgtgt tctaaagcca gttggacttc gcccggggtg
     3841 gcaacaccgg gaatcagggg gatgccgctg ttgtggccgg ctttggcgag ggattcgtgc
     3901 agccccgggc tgatggcgaa aaccgcgcct gcgtcttcga cggctttgag ctgttcggga
     3961 ttggttaccg tacccgcgcc gacgatggcg ttgggcactt ctttggcaat caggcggatg
     4021 gcgtcgaggc cgacaggggt gcgcagggtg atttcgaggg tagggatgcc gccttcgaca
     4081 agggcgtggg acaaatcgat ggcggtgctt aagtcgtcaa tcgccattac cggcacaact
     4141 gcgccggcgg tcaaaatttc gcggggggtc agtttggaca tttcggttct ccgggtggaa
     4201 tggggtattt tattaagatg ggacaggttg taggtcggat tcaagaaacc gacatcttgg
     4261 acggctgtgt cggattcgag aatccgacct acgtctatct taaaacgctt gaataatttt
     4321 tcagacggcc ttcggtctga aaaggccgtc tgaaacgcac atcaggcaaa ttcgccgccg
     4381 aagctcatcg cgccggtttc cgcgccgccg gtcaaactgc ggaagccggc gaagagttcg
     4441 cgaccgcagc cttgttggtt cgcgcccaag tcgatgtgtt cgacttcgcg ggcgttccat
     4501 tcggcttcgt caatcaggac gttgagttcg ccgctaacgg agtcgaagcg gatcaggtcg
     4561 ccggtacgga ttttggcgat gttgccgccc atcagggctt cgggtgtcat gtggatggag
     4621 gctggaactt tgccggacgc gccggacata cgaccgtcgg tcagcagtgc cactttgaag
     4681 ccgcggtctt gcaggatgcc caaaggcggg gtcagtttgt gcaattcggg cataccgttg
     4741 gcacgcgggc cttggtagcg gacgacgcag acgaaatcgc gttccaactc gccgcgttca
     4801 aatgcggaca atacttcgcg ttggtcgttg aacacgatgg caggtgcttc gatgatgcgg
     4861 cagccttcgc gcacggcgga cactttaatc acgccgcgac cgatgttgcc tttcatcagg
     4921 cgcagaccgc cgtcggggga gaacgggttg ccggctttgc gcaggatgtc gtcgttgccg
     4981 ctggtttcgg gggcttcgcg ccattcgagt ttgccgtcga taaggaaagg ctctttggtg
     5041 tagtggcgca taccgtgtcc gacaacggta tcgacatcgt cgtgcaacag gcctgcgtcc
     5101 agcaattcgc ggataacgaa aggtagaccg ccggcagcgg taaagtggtt tacgtcggct
     5161 ttgccgttgg ggtacacacg gatcagcaat gggatgatgg aagaaatttc gtcaaagtcg
     5221 tcccagttca aaatcacgcc ggcggcgcgt gccatggcaa cgaggtgcat ggtgtggttg
     5281 gttgagccgc cggttgccat caggccgatt agggcgttaa tgaaggattt ctcggtcaac
     5341 atttcgccca atggtttaat cgtgccgttt ttgatgccgc gtgcgaggtg tccggcggca
     5401 tagcgggtca gggcttcacg caggtcggtg taagggtgga cgaaggcggc ggcaggcagg
     5461 tgcacgccca tcatttccat catcatttgg ttggagtttg ccgtgccgta gaaagtgcag
     5521 gtgcccgggc tgtggtaaga acccatttcg cttttcaaaa gttcgttgcg tccgaccttg
     5581 ccttcggcga aaagctggcg ggtgcgggct ttttctttgt tgccgatacc gctggacatc
     5641 gggcctgcgg ggacgaagat acccggaata tggccgaaag acaacgcacc gatcatcaaa
     5701 ccgggaacga ttttgtcgca cacgcccata aacaggctgc cgtcaaacat ttgatgagac
     5761 agaccgacag cagtactcat ggcaattacg tcgcgggaga acagcgacaa ttccatgccg
     5821 gcatagcctt gggtaatacc gtcacacatg gcgggcgtac cgccggcaac ttgcgcggtt
     5881 gcgccgtttt tctgcgcttc gtctttgatt tggtcaggga agtctttaaa cggctggtgt
     5941 gcggaaacca tgtcgttgta ggcggtgatg atgcctaagt tgggaacggt gtcctgaagc
     6001 atttcgattt tgatgctttt gggcatggag gcgtagccgt gcgccaaatt gctgcagccg
     6061 agttggttgc gctctaagcg tcccatctgt ttggcactac ggattttcgc cagatatttt
     6121 tcacgcgtcg gacggctgcg ttcaataatg cgcccggtga tttcggcgag tttggagtgg
     6181 ataggagtag tgttcacggt cggtctcctg tcggaacggg gggtattggg gatttgtttg
     6241 tgcgtttctg atttttgtat cgggtattca gacggtgagt atagtggatt aacaaaaacc
     6301 agtacggcgt tgcctcgcct tgccgtatta tctgtactgt ctgcggcttc gtcgccttgt
     6361 cctgattttt gttaatccac tatattttaa aaggtatacc gtctgaaagt gggaagcggg
     6421 tgttattata gtacaaaatt tgtaattttg ttacaaaaaa atcagacatc gaaaagaaat
     6481 ttgatttaaa tcgcagaatc ttccgattgt tgtaacggaa taggggaaac ctgcccgatt
     6541 tttggactag gtcaaataaa ttgtaaaaat gggaatagac aaaaagtgta gcggtgtgta
     6601 gtattactac tcattatgcc gcctgccttt gtttccgata ttgcgatgca gcgtgatggg
     6661 ggaaacaggt ttcagacggc atcgaaaaat tctttcctga cgagataata cgatgagtac
     6721 acaaacaaat tttgatttgg tgttgttcgg tgcgaccggc gatttggcga tgcgcaagct
     6781 gttgccctgt ctgtaccagg cgcatgttgc cggtctgctt catcccgaag ggcgtatttt
     6841 aggggtcagc cgcagcgagt tggataccga aggttttctg gcgaaggtgg aaaccagttc
     6901 caaaatccat gtgaaagaaa atttttccga tgaggcttgg gcatcgtttg tcgaacgtct
     6961 cgcatatctc aaagtcgatg ttacgcagcc ggacgatttt gccgctttgg gcgatttggt
     7021 caaagcgcgc aaagaaaccg acaatgtcgt catctatctt tccaccgcgc cgaaattctt
     7081 cgcgcaaaca tgtgaaaacc ttgccaaaat cggtttgaac gccgacaacg tgcgtgtggt
     7141 tttggaaaaa ccgttgggta cggatttggc ttcttcccag caaatcaata ccgatgttgc
     7201 gcgttatttc aaagaagggc aaatttaccg catcgaccac taccttggca aagaaagcct
     7261 gcaaaacctg cttgcgctgc gttttgccaa tgtaatgttc gagccgctgt ggaacaataa
     7321 atacatcgaa agcgtgcagt tgaccatcgc cgagcagttg ggcgtggaag agcgcggcga
     7381 gttttacgac attaccggcg cgttgcgcga tatggtgcaa aaccatttga tgcagatgct
     7441 gtgcatgact gcgatggaag cccccgccag cttggatgcc gacgcggtgc gcgatgaaaa
     7501 agtcaaagtc atcaagtcat tgaagccgct gaccgtcgag tctgtcaatg aaaacgtcgt
     7561 gcgcggacaa tataccgccg ccagaggcat gaacggctat cttgaagaaa tcaacgttcc
     7621 gcaagacagc tttaccgaaa cctacgtcgc cattaaagcc gaaatcgaaa acgaacgctg
     7681 gaagggcgtt cccttctacc tgcgtaccgg caaacgcatg gcgggcaaag tggcggaaat
     7741 cgttttgaac ttcaaagatt tgaacagcca tatttttgaa ggcagccgca ccgcgcccaa
     7801 ccggctcgtt atcgagttgc aaccatatga atccgtgcgc ctctatacgc agatgaaaac
     7861 cccgggggca ggaaataagg tcgaaaccgt gccgctggca accgatttgg gcaaagcatt
     7921 ggaaagccgc cgcgcggaag cttacgagcg cctgctgctg gatgtgatta acggcaaact
     7981 cgctttgttt aaccgccgcg acgaactcga agccgcgtgg gaatatgtga tgccgatttt
     8041 ggaaaactgg acaaataaca ccacgccgcc gcacggctac ggcgcacact cgtgggggcc
     8101 tgaagccgcg cgcgaactat tggcgcgcga cggacacaag tggcacgaag agcagtaata
     8161 caataatgcg ttcagacggc atggggtttg aaatgccgtc tgaacgtaag taaagcagta
     8221 tagtggatta acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg
     8281 caaggcgagg caacgctgta ctggtttaaa tttaatccac tataaaaagc agtcccgata
     8341 tttggtatca aaagcataaa caactgttcg gccgacatat tgctcaaccc gtttccataa
     8401 cggaatatgc cgtctgaaat aaaaaaagga cacaaatatg tttgtttggc acgaatacga
     8461 aaatgcggca gaagcggcgc agtctttggc tgacgcagtg gcggatgctt tgcagggcgc
     8521 actggacgag aagggcggtg cggtgttggc agtttccggc ggacgttcgc cgattgcatt
     8581 tttcaacgcc ctgtcgcaaa aagatttgga ttggaaaaac gtcggcatca ccttggcaga
     8641 tgaacgcatc gtgccgaccg tccacgccga cagcaatacc ggtttggtgc gcgaatacct
     8701 gttgaagaac aaagcggaag cggcaatgtg gattcctatg gtggaagacg gaaaaactga
     8761 aaccgaatta catcccgatg ctgttgtcga ttatgcactg aaacattaca aacagcccga
     8821 tgttttggtt ttgggtatgg gaaacgacgg gcatacggct tcgattttcc cgaaagctcc
     8881 gcagtttcag acggcaatcg acggttcggc aggtgtcgcg ctggtgcata ccacgcccgt
     8941 taccgcgccg cacgagcgcg tcagtatgac cttggatgcg attgcccata cggggcatgt
     9001 gtttttggcg atacggggcg aagagaaaaa agccgtgttc gaccaagccg cacaaggcga
     9061 aaaccgcgaa tatccgatca acctcgtttt gaaccatcaa ggagtgaact gccatgtctt
     9121 ctacgccgaa taaacaagcc ggatatcccc gactggtcgc cgatatcggc gggacgaatg
     9181 cacgctttgc gctggaaacc gcgccgcgcg tcattgaaaa agccgccgtg cttccgtgta
     9241 aagactacga tacggttacc gatgcggtgc gtgcctatct gaatcaaagc ggtgcaacag
     9301 ccgtacggca cgcggcattt gccatcgcca acccgatttt gggcgactgg gtgcagatga
     9361 ccaaccacca ttgggcgttt tccatcgaaa ccacccgtca gactttgggg ctggacaccc
     9421 tcatcctttt gaacgacttt accgcgcagg cattggcggt aacgcagact tcaagcaaag
     9481 acctgatgca ggtaggcggg caaaagcctg tcgaatttgc ccccaaagcc gttatcggcc
     9541 ccggtaccgg cctgggcgtg agcggattgg tgcacagcca cgcaggctgg gtggctttgg
     9601 cgggcgaggg cgggcatacc agtttcccgc cgtttgacga tatggaagtg ctgatttggc
     9661 agtacgccaa aaacaaatac ggccatgttt ccgccgaacg ctttttgagt ggcgcgggct
     9721 tgagcttggt ttacgaggct ttggctgcaa aacagaaagc caaacccgcc aaactgatgc
     9781 cgtctgaaat cacggaaaag gctttgagcg gcgcgtcgcc tttgtgccgt cagactttgg
     9841 acatcttctg cgccatgctc ggcacggttg cttccaacct cgccctgacg ctgggcgcgc
     9901 gcggcggcgt gtacctgtgc ggcggcatta ttccccgcgt gttggaatat ttcaaaactt
     9961 ccccgttccg cagccgtttc gagaacaagg gcaggtttga agcatatctt gccgcgattc
    10021 ccgtgtatgt cgtcttgagc gagttccccg gaatttccgg tgcggctgcg gctctcgaca
    10081 accatttgag aaacgtttaa ccacagcggc tccttgcagc ggggctgcat tatcgaaggg
    10141 catatcatta tgttaagcaa aatcagcgaa tcactggcaa acctttccgg tgcggaacgc
    10201 aaagtcgccg aatgtgcatt ggcggaaccc aaatggttcg ttcatgccgc cgttgccgaa
    10261 attgccgaac gtgcgtccgt cagccagccg accgtcatcc gattctgccg cagcttgggt
    10321 tataaagggc tgcccgagtt caagctcgcc ttgtccgcca gcatcggtca tgagggtatg
    10381 ccctatgtcc acgaagaact caatgccgac gacgatatgg caagcgtggt cgagaaagtg
    10441 ttgggcaatg ccgccgcctc gctgttgggc gaacgccgct tcctgaaaga gtcggagctg
    10501 gaaaacgcca ttgccacgct gatgcacgcc cgtcgcgtcg agttttacgg tgtcggcaat
    10561 tccggtatcg ttgcgcagga cgcgcaacac aagtttttcc gtttcggaat gtccacggtc
    10621 gcctatgtcg atacgcacac gcagctgatg gcagcatccg ttttgagcga tcaggatgtt
    10681 ttggttgcca tttccaacac gggttcgtct atcgaacttt tggatgcggt cagcatcgcc
    10741 aaagaaaacg gcgcgtccgt catcgcactg acccgcaacg attcgcctct ggcgcaactt
    10801 gccgactgcg tgttgagcgt tgccacacag gaaaatgccg aactctacac gcccatggtt
    10861 tcccgcctct tgcagcttgc cgtcatcgac attctcgcca tcggacttgc cctgcgcttg
    10921 ggcgatgctg ccagcctgca attgcagaaa agcaaaaaaa gcatacacaa caagcacatc
    10981 gattacgaca aagattgacc ttcagacggc atcccacaaa tgccgtctga aatgccgaac
    11041 aacggccgtc ggcggcttgc ggcagtttcc ggcagccttt tcatcccaca acaaaaaacc
    11101 tcattcagga gcatatagat gaaacacttt cacgacttac ccgcatggcc gaaattgtgg
    11161 aaccactttg acgacagcaa aacattgcat atgcgcgaaa tgttcgagca agacccgcag
    11221 cgtgcggaac gctactggct gcaagtcggc ggactgacgc tggactactc caaaaaccgc
    11281 atcaacgacg aaaccatgtc gcttttgttc gagttggcgc gtgaagcagg cgtgccggag
    11341 cggatgcggc agatgttcca cggcgaaaaa atcaatacga cggaaaaccg cgccgtcctc
    11401 cacgtcgccc ttcgcaaccg caccaattcg ccgattgtgg ttgacggtga agatgtgatg
    11461 ccaaaagtca accgcgtttt gcaacgtatg ggcgaatttg cacacgaagt ccgcagtgga
    11521 agctggctgg gctataccaa ccaagtcatt accgacgttg tcaacatcgg catcggcgga
    11581 tcggatttgg gcccgttgat gatgtgtacc gcgctcaaac ctttcggtca tccacgcctc
    11641 aatatgcact tcgtctccaa cgtggacggc tcgcaactgc gcgacgtatt gtccaaagtc
    11701 caccccgaaa ccacgctgtt cattatcgcc tccaaaacct ttaccacgca ggaaacgctg
    11761 accaacgcgc tgaccgcgcg cgaatggttt ttgaatcatg cgggcgatga aagcgccgtc
    11821 gccaaacatt tcgttgctgt ttccaccaac caaaaagccg ttgccgaatt cggcatcgac
    11881 accgccaata tgtttgaatt ttgggactgg gtcggcggcc ggtacagcct gtggtccgcc
    11941 atcggattgc cgattatgct gtatctcggc gaagaaaact tcatcgaaat gctcaacggc
    12001 gcgcacctga tggaccaaca tttcatcaac actccgctcg agcgcaacct gcccgccatc
    12061 ctcgccctta tcggcatctg gtacatcaac tactacggcg gcggaagcca cgtcatcgca
    12121 ccttacgacc aacacctcca ccgcctgccc aaattcatcc agcagctcga tatggaaagc
    12181 aacggcaaac aggttacgtt ggacggcaaa gcagtcggac acgaaacctc gccgattatt
    12241 tggggcgaaa cgggcatcaa cggccagcac gccttcttcc aactgctgca ccaaggcacg
    12301 cacatcaccc ccatcgacct catcgcctcg cttgaaaaac gcagcaacct gcccggacac
    12361 cacgaaatcc tgcttgccaa cgtcttcgcc caagcagaag cctttatgcg cggcaaaacc
    12421 cccgacgaag tccgcgccga actcaaagcg cagggtatgg atgaggcgcg tatcgaagag
    12481 ctggttccgc acaaaacctt ctccggcaac cgcccgacca acctcatcct gatggataag
    12541 gtcaaccccc gcaatatggg cagcctgatt gccatgtacg aacacaaaac cttcgtacaa
    12601 ggcatcattt ggggcatcaa cagcttcgac cagtggggcg tggaactcgg caaacaactg
    12661 gctaaaacca ttttgggcga actgaccggc gaaaccgggc cgcaaaagca cgacagttcg
    12721 accgaacgcc tgatcaggct ttacctgcaa accaaccgca aataaaacct gcggaaaaat
    12781 gccgtctgaa cgccgaccgt ttcaaacggc atttttatcg aacaggaaaa ccgtcggtaa
    12841 acttgcagag cgtgtgcaat cccgatatga tggtttgcat aaatttaaac atgtatgttc
    12901 cgcagctatg gcactgatta aagagccgtt ggacaaagcg aaacaaagga acgaagaact
    12961 tgaagcggca gaagaagcgg cggcgcagga ggcattgggt cgggagcagg aagtcgaccg
    13021 cgtatccgaa tgggaagaac gctacaagct gtcgcgcagc gagttcgagc aattctggaa
    13081 aggattgcct caaaccgtac agaataagct gcaagcctca cagaaaacat ggaaaagcgg
    13141 gatggataaa atctgtgcca acaatgcgaa agctgaaggt gaaacgccaa acggcataaa
    13201 attcagcgaa ctggcatgca aaacggcgga aaccgaagca cgcttggaag agctgcacaa
    13261 ccgtaaaaaa gcccttatcg acgaaatggc cagggaagcg gacaagaaag aactgccaaa
    13321 gcggctctga acagcgcggt tcaggcactg cccgccgata ttgccgaaac cgtcatgccc
    13381 gagtaccgca actgacaaaa cggtttgaat gccaaatgcg ccgacggcga cgaatacggc
    13441 gtggcacaat ctgactgccg taccagagaa atcaatgcga aaaccaaaga aatccaaggt
    13501 tatctgattg actgaaactt ggatgcggga atgtcggcgg cttttgcgtt tttgtcgttt
    13561 ttatagtgaa ttaaatttaa accg
//
LOCUS       DAXHKG010000049        13488 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.049, whole genome shotgun sequence.
ACCESSION   DAXHKG010000049 DAXHKG010000000
VERSION     DAXHKG010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.049"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(77..152)
                     /locus_tag="ACFMWP_001072"
     tRNA            complement(77..152)
                     /locus_tag="ACFMWP_001072"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(117..119),aa:Asn,seq:gtt)
     gene            complement(343..1095)
                     /locus_tag="ACFMWP_001073"
     CDS             complement(343..1095)
                     /locus_tag="ACFMWP_001073"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HFC5891687.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEVRYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            1406..1930
                     /locus_tag="ACFMWP_001074"
     CDS             1406..1930
                     /locus_tag="ACFMWP_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HFC5891688.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNAPPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHWVVADIPADVRRRN
                     AASLQLSRCANIADDQSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSAASA
                     TLCGTFSSASTAAA"
     gene            1891..2070
                     /locus_tag="ACFMWP_001075"
     CDS             1891..2070
                     /locus_tag="ACFMWP_001075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891689.1"
                     /translation="MRHFFIRQHRSRIIKRRAHPPGMRQLHRIAHCLRRPVLCGKPFY
                     GFLFESNPLRLIEVV"
     gene            complement(2155..2298)
                     /locus_tag="ACFMWP_001076"
     CDS             complement(2155..2298)
                     /locus_tag="ACFMWP_001076"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891690.1"
                     /translation="MPSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSK
                     KLR"
     gene            complement(2670..3815)
                     /gene="dapE"
                     /locus_tag="ACFMWP_001077"
     CDS             complement(2670..3815)
                     /gene="dapE"
                     /locus_tag="ACFMWP_001077"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HFC5891691.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV"
     gene            complement(3928..4548)
                     /locus_tag="ACFMWP_001078"
     CDS             complement(3928..4548)
                     /locus_tag="ACFMWP_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HI_0552 family protein"
                     /protein_id="HFC5891692.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYRPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPITLPDYNRWLDNFDTEKYAAFDMWHGAESEYDDHRTVAQQNESDR
                     KLQNDEDFFCIGKHIERDDLGRQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(4582..5091)
                     /locus_tag="ACFMWP_001079"
     CDS             complement(4582..5091)
                     /locus_tag="ACFMWP_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC5891693.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDAEAFKRFVAGYDVHLAIEEPLFDMGNAFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(5186..5737)
                     /gene="azu"
                     /locus_tag="ACFMWP_001080"
     CDS             complement(5186..5737)
                     /gene="azu"
                     /locus_tag="ACFMWP_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HFC5891694.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     DYKFACTFPGHGALMNGKVTLVD"
     gene            complement(6018..6440)
                     /locus_tag="ACFMWP_001081"
     CDS             complement(6018..6440)
                     /locus_tag="ACFMWP_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HFC5891695.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACVEDGRLILLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA"
     gene            6571..9321
                     /gene="secA"
                     /locus_tag="ACFMWP_001082"
     CDS             6571..9321
                     /gene="secA"
                     /locus_tag="ACFMWP_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HFC5891696.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIINTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTKMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKESVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRSDENLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMKEIR
                     FDVVGGLVDLYMPPESMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNTIDGQDIKER
                     LIERIENEYAAKTELVGRQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAAVEEQPVGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            9465..11237
                     /gene="dnaG"
                     /locus_tag="ACFMWP_001083"
     CDS             9465..11237
                     /gene="dnaG"
                     /locus_tag="ACFMWP_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HFC5891697.1"
                     /translation="MIPSDFIDELLAKVDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPTAKAYLDKRGLGAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMLTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            11425..13353
                     /gene="rpoD"
                     /locus_tag="ACFMWP_001084"
     CDS             11425..13353
                     /gene="rpoD"
                     /locus_tag="ACFMWP_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HFC5891698.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         3439 a         3809 c         3356 g         2884 t
ORIGIN      
        1 ctatcttgcc gcattccgaa cgccgtacgt gcaaatatga aaaagcccga acattcaagt
       61 tcgggcttca aaattctggc tccccgacct gggctcgaac cagggacctg cggattaaca
      121 gtccgtcgct ctaccgactg agctatcggg gaatggggtg tattatagcg tccgaaaaaa
      181 atgtgtcaat ccttaatttt ggaaaaatgg gcgacaaaac gacaagcata tgaatcagaa
      241 agacattaag accgatgcct taaaaggatt gccgttgtat gaatttccac agccgtcatc
      301 acaccatatt taagcccgat gagccgttct gccctccccc gcttaaaaca atgccgtctg
      361 aacttcgccg cgttccaaag ccagtaaaaa ctgtttgcgg ttcaacccgc ccgcgtagcc
      421 ggtcagtttg ccgtcgctgc cgatgacgcg gtggcaggga atcaggatag atactttgtt
      481 ctgcccgttg gcggcggcaa cggcgcggac ggctttgggg ttgcccaaac gctgcgcctg
      541 ctccttgtag ctgcgcgttt cgccgtaagg aatcgccaag agcgcgtccc atgcctgctt
      601 ttgaaactcg gtgccaatct gctccaaagg cgtggcaaag gttttcagac gacccttgaa
      661 gtataagtcc aattcctgcc gcaaaagttg cgtccgctca tcctcccgaa acacaaaccg
      721 tccgcgcaag gctttttgga cggcggcaat ttcctgttcc aaatgcttct gtccgacaaa
      781 ctccagcaga cacaatccct tatttccgaa caccgccagc atctcgccca aaggcgtggc
      841 aatggcggca cacaccagct cgttcaagct gtcgggataa cgcacttcca acagacggat
      901 ggctcggcgg atacggacat attcttcagg cgcgcagccg atattgtccc aaaaatcccg
      961 atcgaactgc ccggcttcgc attccgtcag attgggatgc ggcataacgc cgcactcaaa
     1021 aacccgggtt tcgaggcaat ggcggatttc atcccatttt gacggcagat tgtttaagga
     1081 aggcagggta atcattcgtt tgctccgtat ctctatcatg gatttggcgg caaaatcccc
     1141 aattctcgtc attcccgcac gccgatgcag gaacgggcta tgacgtaaat cttgagggtt
     1201 gggttgcggc aatgcctaaa tatgcgatat ttctaaagcc tcagggaaag gaattaaaga
     1261 cttcagacga cctgcaaagg gtcgtctgaa accacgattt ttgcatttac gcattccggc
     1321 acatcatcca accgtttcgg cacattcctg ccgccgttga cagcctataa tgaatccact
     1381 tattcatcaa gcaaaggaat catctatgca aacccgcatc ctctccgccg tactgctggc
     1441 tttttcaacc gctgcctttg ccgggggcgc attcacgctg caattcgaca acccgtccga
     1501 agacggcggc ttcacgcaaa accagctttt gagtgcgcct tacggcttcg gctgttcggg
     1561 cggcaatgct ccgcccgcgc tgtcgtggaa aaatccgccc gccgggacaa aaagtttcgt
     1621 cctgaccgtt tacgataaag acgcgccgac cggactgggc tggatgcact gggtggtcgc
     1681 cgacattccc gccgatgtcc gccgccgcaa cgcggcctcg ctgcaattaa gccgctgcgc
     1741 caacatcgcc gacgaccagt ccgcagccat atcggcggta atcagtttgc ggatttgccg
     1801 catcaggttg acgccttcgt acacggcaaa accgatgccg tcatgctgca accacgccaa
     1861 cacgccgcaa agcgcggcct ccgccacatt gtgcggcact ttttcatccg ccagcaccgc
     1921 agccgcataa tcaaacgccg cgcccatccg cccgggatgc ggcagcttca ccgcatcgca
     1981 cactgcctgc gccgtcccgt attgtgcggc aaacctttct atggcttcct gttcgaaagc
     2041 aatccattgc gcctgataga ggtcgtctga atcgggaata ttgatgacgt caaacgtctg
     2101 cccgcctgcc aaggcgaccg cctcacccgc cgcaatcctc aattcgcgcc tcgctcaccg
     2161 cagcttcttg cttccgcgcc gcacgataag cacagccggt tcatataccg ccacgctgcg
     2221 gtacaaggcg gtatgatgtt gcacgatgcc gcccaaagca cccaatcgtt cgcgcgtatg
     2281 aaagtaattt gacggcacta ttatctccaa cacgcagggc cgcacataag gcgcagccct
     2341 gtttaccctg atttggaagg ggttacttcc caaaaataaa ccaaaatccc actgccccga
     2401 atggccgggt ttcaaccata ttccgtcggt gtgcctgcaa cttgactccc tcccctgtgg
     2461 gggagggttg gggagagggt aaaacggggc agatacagac aatatttccg ttaccgcccc
     2521 gatgccctct ccctaaccct ctcccacggg agagggaatg gattgccgtt gaaataaatc
     2581 gctctacata aaaaatcaat gtgttatctc aaacccacgt taggtctaag caaatggtcg
     2641 gacatccgta tccggcaagc aagctgcttt cagacggcat ttccagccaa caagcgcgcc
     2701 aatatcccct catacaccgc cgacagcttc ggaatatcgt ccagccgcac gttttcgttg
     2761 atttggtgga tggtcgcatt ggacgggcct aattcgatga gttcttttgc aatggctttg
     2821 atgaagcgtc cgtccgaagt gccgccggtg gtggacaatt cggcctcaat gccgcaggtt
     2881 tcggcaatgg ctgcgcgtgc cacgtcggtc agtttgcccg cttgggtcag aaagggctgc
     2941 cccgaacacg accactgtaa atcgtattgc acgccgtgtt tgtccaaaat ggcgtgaacg
     3001 cgttgtttca gccctgcttc ggtggactcg gtggagaagc ggaaattgaa tttgacgttc
     3061 agctcgcccg gaatgacgtt ggtcgcgcct gtaccgccgt tgatattgga aatttgaaag
     3121 ctggtcggcg gaaagtattc gttgccttcg tcccagactt cctgcgtcag ctctaacaag
     3181 gccggggcaa aagtgtggac gggattgatt gccaaatgcg gataggcaat atgtccttgc
     3241 ttgcctttta cggtcaggtt gcccgacagc gagccgcgcc ggccgttttt aatcatatcg
     3301 cccaatttgt ccacggctgt cggttcgccg acgatgcagt agtcgataag ctcgtcgcgc
     3361 gctttcaata catcgacgac tttggtcgtg ccgtccaacg cgtcgccctc ttcgtcggaa
     3421 gtaatcagaa gcgcaatgct gccttggtgg tcgggatgtt cggcaacgaa gcgttcacag
     3481 gcggtaacga agcaggcgat gctggttttc atgtctgccg cgccgcgccc gtataatctt
     3541 ccgtcgcgct cggccggttc gaacgggggc gaatcccatt tttcgacagg acctgtcggt
     3601 acaacgtcgg tatgccctgc aaaacagacg acgggagctt tcgtgccgcg tcgcaaccag
     3661 atgtttttgg tgtcgccgaa atggagttct tcagccgcaa aaccgatttt gtgcaggcgt
     3721 tcggcaagga gtttttggca atccctgtcg tcaggggtaa cggatggtcg ggaaatcagc
     3781 tctttggcaa gctctaggga ttgagtttcg gtcatatttg ttcacttttg aaattagacc
     3841 gtctgaaacg ttctgaatgt gattttcaga cggcatttag gttaggttgg catacggggt
     3901 gggtatttta cccatcagtc ttctgaatca tttgccgtgg caggcttcat aaagcggcag
     3961 caaatcttcc accgtttccg ctatccattt cgcgacatcc tgcctgccca aatcgtcgcg
     4021 ttcgatgtgt ttgccaatgc agaaaaagtc ttcgtcgttt tgcaactttc ggtcggactc
     4081 gttttgttgc gcgacggtgc ggtggtcgtc gtattcgctt tccgcgccgt gccacatatc
     4141 gaatgcggcg tatttttcag tgtcaaaatt atccagccat cggttgtaat cgggcagagt
     4201 aatcggcgac acgtcggctt tgtagcagtg ccaatccaag ctgacactca gacggcggcg
     4261 gttaagtagt atcgacagga tggcggcaga gtttttgtat tgggcgtatt tgaaataggc
     4321 aaagaaatgg gcgcgaacct gccagccgtt acaccagcgt tcgatgtgcg gcggcgcaaa
     4381 cggcgcaccc aattcggcgg caacctgctg aatcagctgc tgccatatct gccagttttc
     4441 cttgtagtcg gctttgattt gcggaatgct ttcaggccgg tattttttaa gctgggcaaa
     4501 ctggaaaaac gggatattga acaaatcgca acttttcggg gtcagcataa tatatccttg
     4561 agacgattgt ttcagacggc attatttgcg ccggcgcgcc gccatgattt cgccgatttc
     4621 ggtcagtttt tcttttggga taaaggcgtt gcccatatca aacagcggct cttcaatcgc
     4681 caaatgaaca tcatatcccg ccacaaaacg tttgaacgct tccgcatcgg gaacataagc
     4741 attgtctgct tcgagtttgg caaattcggc ggaaacagcc gcccagttgt cgtgcagccc
     4801 gatatgttgg cgcaaaagct cgtccacgct ttcttgggct tgcggcgcat attgcagcag
     4861 cagcgggaag aagttttctt cttcgtcttc atggtgcagc ggcgcggcaa cgttgaaata
     4921 ctgggcgatt tggcggatgg tttgcaaaac aatctgattg cagccgtttt cggcgatata
     4981 gtccgacagc atggcgactt gtccgcaaaa acggcgcact ttgccgtggc aggcatacag
     5041 catttcaatc ggttcggcaa aggtaacgct tttggtttca aacggattca tgttttcgtt
     5101 ctcaacgggc acttttcaag cagtcatttt ataataaaac agcctgcaca aagcaggctg
     5161 tccgtctttt gagactttaa gcggattaat cgaccaaagt cactttgccg ttcatcaaag
     5221 caccgtgacc cgggaaggtg caggcaaatt tgtagtcgcc gtcagccaat ttggcaggat
     5281 ccagagtcag ggaagactct tcgccgccgc cgatcagttt ggtgtgggca acaacgcgcg
     5341 catcgtcagg tttgacatag tcggtatcgg cagcacctac gccgtcttta aatacgccgt
     5401 ccatgtcttc agctttggca atcacaaggt tgtgacccat gctggctttg ggttgcgtac
     5461 cggtatgttt cagagtgatg gtaaactctt tacatgcttt gctgacttgg atgtctttgg
     5521 tgttgaactg catattgtcg ttggattcga cagttgccgc acaattgccg gcagcagggg
     5581 cttcggcagc atctgcagga gcagcttcgg cggcaggcgc ttcggaagcg ggtgcttcag
     5641 cagcaggagt tgcctcggca gcaggcgcgg caggttcttg agagcaggca gccaaaccga
     5701 taacggcggc agaaatcaga gccagataag ctttcatggt aaatctccaa tcgataaaat
     5761 aatattcggt tttacagaaa tcaaagtgca accgccatta acaaaacctt gaaaaagatt
     5821 ccgccgcgtt gcacaaacag atgtttcggg gcggcatttt gctacaaatt tcatttgaaa
     5881 tcaaagcctg tctgcaagtt tacaatcgtt tactttaaaa ggggcaattt taccccgaac
     5941 ctatttcttt agtattagac ccattatcct ttacttctta atattaacgg atgtttacac
     6001 aaattcccgt atacatttta tgcgccatgc cttctaacca agtttgccaa tgcctccgcc
     6061 aattcgggat gccgtttttc caactttgcc gccgccgaac cgaaactctc cagcgcagcc
     6121 ttactcaaat gcagggtatt ggttttcggc ggtttttccg gtttcgggac cagcctgacc
     6181 gaaacagagc gtatcgaagc gtcaagccct gccagctgcg gcaataccga cggggcaatc
     6241 atcttcaagc gcgatgccgc catattgttt gccgccaaaa gaatcagcct gccgtcttcg
     6301 acgcaggccg tctgaaaatg cgggtgcagg ttggcaggca gcagtttttt cacggcggca
     6361 tccaaccgcc gccactgtcc cgcctgtttc aaaagtccgg aaagcagcgc gtcccgcctg
     6421 cccaactgtt ccaaattcat aaaacataca cccaaaaaga ttgaaatacc gcaaacgcgc
     6481 ctttatttca gacggcatta gcactttgca caaacgcttg tgttaaaatc gcgttttcgc
     6541 ccactattat atcaggcgca ggaattattc atgctgacaa acattgccaa gaaaatcttc
     6601 ggcagccgca acgaccgctt gctgaaacaa taccgtaaat ccgttgccag aatcaacgcg
     6661 ctcgaagaac agatgcaagc cctaagcgat gctgatctgc aagccaaaac tgccgaattc
     6721 aaacaacgcc tcgccgacgg tcagactttg gacggcattt tgcccgaagc cttcgccgtc
     6781 tgccgcgaag cgtcccgccg caccctcggt atgcgccact tcgacgtgca gcttatcggc
     6841 ggtatggtgc tgcacgacgg caaaatcgcc gaaatgcgta ccggcgaagg caaaaccctg
     6901 gtcgccaccc tcgccgtcta tctcaacgcg ctggccggca aaggcgtgca cgtcgttacc
     6961 gtcaacgact acctcgcctc gcgcgacgca ggcattatgg agccgctcta caatttcctc
     7021 ggcctgaccg tcggcgtgat tatttcagat atgcaaccgt tcgaccgtca aaacgcctat
     7081 gccgccgata tcacctacgg caccaataat gaattcggct tcgactacct gcgcgacaat
     7141 atggttaccg accaatacga caaagtgcag cgcgaattga attttgccgt tgtcgatgaa
     7201 gtggattcca tcttgattga cgaagcgcgc actccgctga ttatctccgg tcaggcagac
     7261 gacaacatcc agttgtacca aatcataaac accgtcccgc cccacctcgt ccgccaagaa
     7321 accgaagaag gcgaaggcga ctactgggta gatgaaaagg cgcaccaggt catcctgagc
     7381 gaggcaggtc acgaacacgc cgagcaaatc ctgaccaaaa tggggttgct ggcagaaaac
     7441 gactcgctct attccgccgc caacatcgcc ctgatgcacc accttatggc cgcattgcgc
     7501 gcgcactcgc tgttccacaa agaccaacat tacgttatcc aagacggcga aatcgtcatc
     7561 gtggacgaat ttacaggtcg tctgatgtcc ggccgccgct ggtcggaggg tctgcaccaa
     7621 gccgtcgaag ccaaagaaag tgtggaaatc aaacgcgaaa accaaaccct cgcctccatc
     7681 accttccaaa actatttccg cctgtacacc aagctctccg gtatgaccgg tacggcagat
     7741 accgaagctt tcgagttcca aagcatttat aacctcgaaa ccgtcattat cccgaccaac
     7801 cgccccgtac agcgcaaaga cttcaacgac cagattttcc gttccgccga agaaaaattc
     7861 gaagccgtcg tcaaagacat cgaggaatgc cacaaacgcg ggcagcccgt cctcgtcggc
     7921 accaccagca tcgaaaactc cgaactggtc tcccaccttc tgcaaaaagc cggactgccg
     7981 cacaacgtcc tcaacgccaa agaacacgaa cgcgaagccc tgattgtcgc ccaagccggc
     8041 aaagtcggtg cgattaccgt tgccaccaat atggcgggac gcggtacgga catcgtttta
     8101 ggcggcaacc tgaagcacca aaccgatgcc atccgatccg acgaaaacct gagcgacgaa
     8161 gagaaacagg cacaaatcgc cgcactcgaa aacggctggc aggcagaaca cgataaagta
     8221 atggaagcag gcggtttgca catcatcggc acagaacgcc acgaaagccg ccgtatcgac
     8281 aaccagttgc gcggacgctc cggccgtcag ggcgaccccg gatccagccg tttctacctc
     8341 tcctttgaag acccgctgct gcgcctattc gcactcgacc gtgccgccgc catcctcaac
     8401 cgcctcgcac ccgaacgcgg cgtcgccatc gaacacaacc tgctgacgcg ccaaatcgaa
     8461 ggcgcgcaac gcaaagtcga aggcagaaac ttcgatatgc gcaaacaggt tttggaatac
     8521 gacgacgttg ccaacgaaca gcgcaaagtc atttacagcc agcgcaacga aattctgacc
     8581 agcaaagaca tcagcgacct gatgaaggaa atccgttttg atgtcgtcgg cgggcttgta
     8641 gacctctata tgccgccgga aagtatggaa gagcagtggg atattccgac cctggaaaac
     8701 cgtttggctg ccgaattcag actgcacgaa gacattcagt cctggctgaa agcagacaat
     8761 acaattgacg gtcaagacat caaagagcgc ctgatcgaac gcatcgaaaa cgaatatgcc
     8821 gccaaaaccg aactggtcgg caggcaggcg atggcggatt tcgagcgcaa cgtgatgttg
     8881 caggtcatcg acaaccaatg gcgcgaacac ctcgccgcta tggactacct gcgccaaggc
     8941 atacacctgc gcagctatgc ccaaaaaaat ccgaagcagg aatacaaacg cgaagccttc
     9001 acgatgttcc aagacctgtg gaacggcatc aaattccata ttgcttccct gcttacctcg
     9061 gttcaaatcg aacaaaaccc tgtcgcggcg gttgaagagc aacccgtcgg caacatccag
     9121 tccatccatt ccgaatcgcc cgatatggaa gaacttttgg ggcaatcgca aaccgatctg
     9181 gttaccgaag cctttaatcc cgatgggacg gatttcagcc ccgaagcctt ggaagcgcgg
     9241 gggcaaatcg tccaccgcaa cgacccctgc ccctgcggca gcggtttgaa atacaaacaa
     9301 tgccacggca aactggcttg agcgtttgaa cgcaaatgcc gtctgaacat ccggtttccg
     9361 gcttcagacg gcattttgcc tgaaccgcca catccgaccg ccattccgaa aactcccgat
     9421 ttcgtaccgt acaaactaaa aacaggcatc cgccccgccg aactatgatt ccatccgact
     9481 tcattgacga acttctagcc aaagtcgata ttgtcgatat tatcgacgag caggttccgc
     9541 tgaaaaaagg cggggcgaac tatatggcgt gttgcccgtt ccacaaggaa aaaacaccgt
     9601 cgttttcggt cagtccgacc aagcagtttt atcattgttt cagttgcggg gcgcatggtt
     9661 cggcgattgg ttttgtgatg gaacatcagg ggctgtcgtt tccggaggcg gtgcagtttc
     9721 ttgccgaccg tgtgggcatg gttgtgccta aagtgcgcgg gcagaacgat aatcccgaag
     9781 tccgtgccga acgtaagaaa aaacagcaga cactggagga aacgacggct gcggcggctg
     9841 atttttacgc gcaacagttg aaattcaatc cgacggcgaa ggcttatttg gacaagcgcg
     9901 gcttgggtgc agaagttatc gcgcattatg gtttgggcta cgcgcccgac ggttggcagc
     9961 ctttggcgca agtgttccaa ccgtacccga atactgcgtt agtggatacg gggatggtga
    10021 ttgacaatga gggacggcat tacgaccgct tccgccatcg gattatgttc cccatccgca
    10081 atccgcgcgg gcaggtgatc ggtttcggcg gcagggtgct ggacgactcg aagccgaaat
    10141 atttaaattc tcccgataca cctttgtttg acaaagggaa aaacctttac ggactgtatg
    10201 aagggcgtgc cgctgtcaag gaagcaggac gaattttggt ggtcgaaggc tatatggacg
    10261 tggtcgcgct ggcgcagttc ggcgtgggct acggcgtagc ggctttgggt acggcaacga
    10321 cggcagaaca cgtcaaaatc ctgatgcggc aggcggacag tatttatttc tgtttcgacg
    10381 gcgacagcgc ggggcgaaaa gcggcttggc gcgcgctgga aaacgcgttg ccgcagttga
    10441 aagacgacaa atcgctgcat tttttgttcc tgcccgagga acacgacccc gacagttaca
    10501 tccgtgccta cggcaaagcg caatttgaag acgcgcttct gaatcaaagc aagcctttgt
    10561 cggagtattt ctgggaacac ctttcagacg gcattcatct caatacgcag gaaggcaagg
    10621 cggaattggt gaaaaccagt tcgccgcttt tggcgcagat taccgcgccg gcattggctt
    10681 atttgttaaa acaacggctt agcgaactgg tcggcatcga ccccgacaac ctcgcgcaac
    10741 tgctaggaca ggaagcgccg aagcggcacg tcaaacaaaa aaactacaaa ctgcctccga
    10801 tttccgtcaa acagcccgtc atgctgacgc tggtacagcg gcaaatccgc agcctcttga
    10861 taaatccgga ttgggctgca tatatagacc tgcccgatta tctggcgttg gacggtgatt
    10921 tcgcctgcct tgccaatctt gccgaatcga ttaaaaacca tgccgccgta cccgaaaccg
    10981 ctcaggtttt agagtatatg cgcggctcgc cttacgaaga aacgataacc cgaatcttcc
    11041 attcaacgca ccaatcggaa gaaatgaaca gcagcagtga agaagattgc gagaatttcc
    11101 aaatcggcat gaaaaaactg ctcaatgagt taaaatacag ccaaatcgaa gcattgaaac
    11161 aaaaaagcct gcaatccggc ttaaatgaaa gcgagaaaaa acttttgctg tcgttgctga
    11221 ccgcaaaaca aaattgaccg gcggattccg ccacccgtaa acccgttatg ccgtctgaaa
    11281 agcacttacc ccggctgcaa caacgacacc tgcagaacac ccatccccaa aagccttcag
    11341 acggcatcag agtaccctac tctgccacgc cttcaggtgc gtccaaacgc aaaccgtcgg
    11401 catcttgcca acagaaagca gacaatgtcc aaaaaccaaa atcacgaaga ataccaagac
    11461 gatgcccgac ccctgacgat tgaggaacaa cgcgcgcgcc tgcgccaact catcattatg
    11521 ggcaaagaac gcggctacat cacctactcc gaaatcaatg acgcactgcc cgacgatatg
    11581 tccgatgccg atcaaatcga caacatcgtc agtatgattt ccggtttggg tatccaagtt
    11641 accgaacacg cccccgatgc ggaagacata ttgttaagcg acaatgccgc cgttaccgac
    11701 gatgatgccg tcgaagaagc cgaggccgcc ctttccagcg ccgactccga gttcggcagg
    11761 acgaccgacc ccgtccgtat gtatatgcgc gaaatgggac aggtcgacct gctgacccgc
    11821 gaagacgaaa tcatcatcgc caaaaaaatc gaaaacgccc tgaaaaatat ggttcaggcc
    11881 atctccgcct gcccgggatc cattgcggaa atcttagaac tcatcgaaaa aatccgcaaa
    11941 gacgaaatcc gcgtcgacga agtcgtagaa gccattatcg acccgaatga agtattgctc
    12001 aacgaattgg gcttggggca cttggaaacc acagcgcccg agaaaccttc caacgacaat
    12061 tcggacgaaa acgaagacga cgaagaatcg gaagaagatg cggatgaaat ctcggcagcc
    12121 aatctcgccg aattgaaaca aaaagtcatc ggccactttg cccaaatcga aaaagactac
    12181 aaaaaaatga tcggtcgttt ggaaaaacac cacagccggc acaaagacta tctcgcctac
    12241 cgcgacgcga ttgccaacaa actgctggaa gtccgtttcg ccacccggca aatcgacagc
    12301 ctcagcagca gcctgcgcgg aaaagtagaa aacatccgca aactcgaacg cgaaatccgc
    12361 gacatctgcc tcgaccgcgt ccatatggag cgcgactact tcatccaaaa cttcctgccc
    12421 gaaatcacca atctggaatg gattgaagaa gaaatcgcca aaggcagggt ttggagcgac
    12481 gcgctcgacc gcttccgcca cgccatcctc gaaaaacaaa ccgagttggc agatatggaa
    12541 aaagaaaccc gcatttccat cgaagagttg aaagaaatca acaaaaatat ggtgtcgagc
    12601 gaaaaagaaa ccgcagccgc caaacaggaa atgattcagg caaacttgcg cctcgtcatt
    12661 tccattgcca aaaaatacac caaccgtggc ttgcagttcc ttgatttgat tcaggaaggt
    12721 aacatcggcc tgatgaaagc ggtcgacaag ttcgaatacc gccggggcta caaattctcc
    12781 acctacgcaa cctggtggat ccgccaggca atcacccgtt cgattgccga tcaggcgcgt
    12841 accatccgca ttccggtaca tatgattgaa accatcaaca agatgaaccg catctcgcgc
    12901 caacaccttc aagaaaccgg cgaagaaccc gattccgcca aacttgccga actgatgcag
    12961 atgcccgaag acaaaatccg caaaatcatg aaaatcgcca aagagccgat ttcgatggaa
    13021 acccccatcg gcgacgacga cgattcgcac ttgggcgact tcatcgaaga tgccaacaat
    13081 gttgcgccgg ccgatgcggc aatgtacacc agcctgcacg aagtaaccaa agaaatcctc
    13141 gaaagcctga caccgcgtga ggcaaaagtc ctgcgtatgc gtttcggcat cgatatgaac
    13201 accgaccaca cgctggaaga agtcggcaga cagtttgacg taacgcgcga acgcatccga
    13261 caaatcgagg caaaagcact ccgcaagctg cggcatccga caagaagcga ccgtttgaga
    13321 agtttcttgg acagcgaaga cagcaagctg taaaccaaaa aaccgcaggt ttcaaatacc
    13381 tgcggttttt tcttacacaa taaacaacgc ttccacatat cccacactcc tatcccgaga
    13441 cctttgcaaa atcccccaaa atcccctaaa ttcccaccaa gacattta
//
LOCUS       DAXHKG010000050        13389 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.050, whole genome shotgun sequence.
ACCESSION   DAXHKG010000050 DAXHKG010000000
VERSION     DAXHKG010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.050"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(110..538)
                     /locus_tag="ACFMWP_001085"
     CDS             complement(110..538)
                     /locus_tag="ACFMWP_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HFC5891699.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(603..2351)
                     /locus_tag="ACFMWP_001086"
     CDS             complement(603..2351)
                     /locus_tag="ACFMWP_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HFC5891700.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPPAGDFGARFKQNTDHIVLTHVFNSGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2678..4111
                     /gene="ccoN"
                     /locus_tag="ACFMWP_001087"
     CDS             2678..4111
                     /gene="ccoN"
                     /locus_tag="ACFMWP_001087"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HFC5891701.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4138..4749
                     /gene="ccoO"
                     /locus_tag="ACFMWP_001088"
     CDS             4138..4749
                     /gene="ccoO"
                     /locus_tag="ACFMWP_001088"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HFC5891702.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4754..4924
                     /locus_tag="ACFMWP_001089"
     CDS             4754..4924
                     /locus_tag="ACFMWP_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HFC5891703.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4948..5859
                     /gene="ccoP"
                     /locus_tag="ACFMWP_001090"
                     /pseudo
     CDS             4948..5859
                     /gene="ccoP"
                     /locus_tag="ACFMWP_001090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
     gene            5935..6279
                     /locus_tag="ACFMWP_001091"
                     /pseudo
     CDS             5935..6279
                     /locus_tag="ACFMWP_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
     gene            6481..7890
                     /locus_tag="ACFMWP_001092"
     CDS             6481..7890
                     /locus_tag="ACFMWP_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HFC5891704.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVNTMPRNQGWYHTMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPSKGRARSWWRNLHGTFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            7991..11200
                     /gene="recC"
                     /locus_tag="ACFMWP_001093"
     CDS             7991..11200
                     /gene="recC"
                     /locus_tag="ACFMWP_001093"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HFC5891705.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRLG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWRQPATIGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGAGAA"
     gene            complement(11270..12838)
                     /gene="mtrF"
                     /locus_tag="ACFMWP_001094"
     CDS             complement(11270..12838)
                     /gene="mtrF"
                     /locus_tag="ACFMWP_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HFC5891706.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFELSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13172..13384
                     /locus_tag="ACFMWP_001095"
     CDS             13172..13384
                     /locus_tag="ACFMWP_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891707.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIARDVSLTTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3355 a         3234 c         3550 g         3250 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgtggtt taaacgtttc ggcttgtaat cagacgcggg
      121 cgttgtccag ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga
      181 tgatttcgtc aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc
      241 gcgtaccggt ccggcaatag gcaaggacgg gatattcggc ttgtccgatg agttggcgga
      301 aggtttcgac atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag
      361 taacgcctgc ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt
      421 cgcggtcggg gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat
      481 cggctttggt cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt
      541 tgtttccttt actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa
      601 gtttaaccga acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta
      661 tccgctgccg ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag
      721 tggatattga tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag
      781 gcataaccgt ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg
      841 ccgctgttga agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca
      901 aaatcgcctg ccggcgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg
      961 ggaagtggca ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa
     1021 tcttcggtac tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc
     1081 tgacagcgga tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga
     1141 tagagtttgt ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc
     1201 agatcaaggc acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg
     1261 ctgttttcat ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc
     1321 tgcctcaaac ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa
     1381 taagattcgg gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta
     1441 ataccttcga atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg
     1501 aacgcggcag gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt
     1561 ccgagcaatg tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg
     1621 cggtcggcga gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg
     1681 acgtggagca ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct
     1741 gtttcgcaga tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg
     1801 ccgcttaagg caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag
     1861 cccatctcga caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc
     1921 cctgtttccg gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag
     1981 cggtgcggca gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa
     2041 ccgcgttctg tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag
     2101 cggatttgcc actcgccgcg tacggcggca gcgtgccagc ggttttttgc aatttgttcg
     2161 agcggcatgg acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc
     2221 cgaatcagat agctgcccgg tacccaattc ggcaggctta tttctatagg aagatcatca
     2281 tcttgtgtga atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta
     2341 taatgaatca taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg
     2401 cagcttaacc tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg
     2461 cggtcgggtt gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc
     2521 aaagggctcg tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa
     2581 atttagaaaa aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga
     2641 taaaaatctt tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta
     2701 caaagtggtg cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt
     2761 cggcgttatc gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc
     2821 ttggttccac ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg
     2881 cggttgtggc ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct
     2941 tttcggcggt tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc
     3001 cgtcgtcagc ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc
     3061 gatcgatatt ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat
     3121 tgccaaacgt aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt
     3181 ggcggtcgca cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc
     3241 ataccccgtc tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc
     3301 cgtgggcttc ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca
     3361 agcagcccgc cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt
     3421 cacctatatg tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca
     3481 atctttgggt atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa
     3541 cggcatcatg accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt
     3601 cctgattgta tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat
     3661 taaaacggtc aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg
     3721 tgcgttgggc tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct
     3781 gttcggcaaa gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac
     3841 catcggcgtg gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat
     3901 gtggagttct ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg
     3961 caccatgcct tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg
     4021 cattatggcg tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat
     4081 ccctgcggtt tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg
     4141 aaattacaac aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta
     4201 gtcagtgtcg gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag
     4261 ccggcaccgg gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc
     4321 cgtgagggct gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag
     4381 cgttacggtc attactctgt tgccggagag tcggtttacg accatccttt ccaatggggt
     4441 tccaaacgta ccggtcctga tttggcacgt gtaggcggcc gctattccga cgaatggcac
     4501 cgtatccacc tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattccca
     4561 tggcttgcac gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt
     4621 aaagtaggta ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac
     4681 aaatccgagc tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac
     4741 gtaaggtaac atcatggata ttaacggtat tcgcgctctt ttcacggtat ggatctttat
     4801 ctgtttcctg ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa
     4861 tgccgcaaac agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg
     4921 ttaatattgt gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc
     4981 tggaatatat atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg
     5041 ctgtctcaaa atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat
     5101 gagtgggacg gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt
     5161 gttttgacgt ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac
     5221 aaaggtctgc tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat
     5281 gagcaatacg gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa
     5341 gaccctcaag ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac
     5401 ggctctgatg ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg
     5461 ggcggtgatc ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct
     5521 gcctggggtc ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc
     5581 ctttcaaaac ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc
     5641 agcggtccgc ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt
     5701 ttgggtccga acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc
     5761 gaaaccatta ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa
     5821 gacaaactgc atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct
     5881 ccggtgaaaa aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct
     5941 gctcctgcag aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa
     6001 gccgaggaaa aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt
     6061 tgtgccgcct gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat
     6121 tgggccgacc gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc
     6181 aatacgatgc ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg
     6241 gttgactata tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt
     6301 atcggttatg aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc
     6361 ggttttaaac gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt
     6421 agtctttatt gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta
     6481 atggatacac aaatcaaaac tgaagccgac aatcagagca accggcgtta tctgaccgtt
     6541 tggcggtggc atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt
     6601 acgggtttgg gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat
     6661 gttgtgccgc aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc
     6721 gttaatccgg aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt
     6781 gccgtgttcc gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg
     6841 gcaaaagtgg tcaacaccat gccgcgcaat cagggttggt atcacacgat ggatgaaatc
     6901 cacagcgata tgatgctcgg ttcgacaggc gattatcttt tggaaacggc tgcatcgctg
     6961 acgattatca tgataatcag cggtttgtac ctttggtggg tgaaacggcg cggcatcaag
     7021 gcgatgctgc tgccgtcaaa aggcagggcg cgttcttggt ggcggaatct gcacggcacg
     7081 tttggaactt gggtgtcgtt gattttgctg ttgttctgcc tgtcgggtat tgcttgggcg
     7141 ggtatttggg gcggcaagtt cgtacaggct tggagtcagt tccctgccgg taaatggggt
     7201 gtcgaaccga accccgtttc agtcgtgccg acccacggcg aggtattgaa tgacggcaag
     7261 gttaaggaag tgccgtgggt tttggagctt acgcctatgc ctgtttcagg gacgactgtg
     7321 ggcaaagacg gcattaaccc tgacgagccg atgacattgg aaaccgtcga ccgctttgcg
     7381 cgggaaatcg gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta
     7441 tggactttgt cgcaggattc tatgagttac gacatgatca gcccgtttgc cgaccgcacg
     7501 gtacatatcg accagtacag cggcaaaatc cttgccgaca tccgttttga cgattacaac
     7561 ccgttcggca aatttatggc ggcaagcatt gcgctgcata tggggactct gggctggtgg
     7621 agcgtgttgg cgaacgtctt gttctgcctt gccgtcattt ttatcggtat cagcggctgc
     7681 gtgatgtggt ggaaacgccg tccgaccgga gcggtgggca tcgttccgcc ggcgcagaaa
     7741 gtcaagctgc cggtttggtg gatgatggca ttgccgctat tggcaatcgc actgctcttc
     7801 ccgaccgcac tgcttgccat tgccgtgatt tggctgttgg atacgctgct gttgtcgcgg
     7861 attcctgttt tgaggagatg gtttaaatga ccaaatgccg tctgaaaggt tcagacggca
     7921 ttttgtttga aggcggacgg gggaaaggct atataatccc gaatactttt ccgcaacttt
     7981 tgtcgaaatc atgttttatc tgtatcaatc caaccgtctt gaaacgctgg cggcattgtt
     8041 tgcccgcatt caaaaagtca aaccgctgaa atcggcttta cagcccgaac agattattgt
     8101 gcagagtcag gggatgcgcc gctatctcaa tacctgcctc gcccgcgatt tgggcgtggc
     8161 ggcgaatttg tcgttcagcc tgcccgccgg cctgacgtgg aagctgatga aaaaactgat
     8221 tcccggtatt ccggaactca gcccgtttgc acccgaagtc atgcgctggc ggctgctgga
     8281 tttgttccgc agtgaagcat tccggaatac ggcagaattt gaagatgtga ggaatgtgct
     8341 gcaagactat ctgggcagcg gcgaatcggc agattaccag cttgcgggac agcttgcgga
     8401 catattcgac caatacctcg tgtaccgtcc tcagtggata gacgcttggc agcagggcag
     8461 gcggctcggt ttgggcgacg acgaaatctg gcagtccaaa ctgtggcgtt acctcgacga
     8521 tggcaggcag agcgcgccgc accgtgtcgc gttgtgggaa aagctgcttg ccgcgttgga
     8581 caaggataag ctgcccgagc gttatttcgt gttcggcatt tccacgatgg cgccgatgta
     8641 tcttcagctt ttgcacaagc tgtccgaaca ttgcgatgtg ttcgtgttcg cactcaatcc
     8701 gagcgggatg tattggggca acgtcatcga agcggcgcaa atcctcaaag gcggcggcga
     8761 tcccgattta actcaggcag ggcatccgct gctcgcctca ttgggcaagc aggggcgcga
     8821 ctttttcgac tttttgaacg aaatggaaat agaaggagaa acgccggtat ttgaagaagg
     8881 cgggcgcgat acgcttttgc acgccctgca aaccgatatt caaaacctga aaatgccgtc
     8941 tgaaaatgtg ggaagcgtca acacgggcga cggctcgata cgcatcgtct ccgcacacag
     9001 ccccttgcgc gaattgcaga tactcaaaga caagctgttg aaaattctgc atgaacatcc
     9061 cgattggcag ccgcatgata tcgccgtatt aaccccgcac atcgaatcct atacgccttt
     9121 tatcgaagcc gtgttcggac aggcgcagcc cggtgcgcag gcattgccgt attccgtttc
     9181 agacgtgaaa atcagccgcc gacaaccgct gtttcatgct ttgtcatgcc tgttcgactt
     9241 gttggaaagc cgatttgaag tcgataaagt gcttgtgctt ttagaaaccg cacccgtgtt
     9301 gcgccgtttc ggactgactg aggacgattt gccgcttttg cacgatatgg ttgccgattt
     9361 gaacgttcac tggggtttgg acggagaaat gcgcggcggc acggatcagc tgtttacctg
     9421 gaagcaggcg gtagaacgca tgatattggg ctggatgctg cccgaaggcg gcaacccgat
     9481 gtggcaggat gtcagcgcgt ggtatgccga cgtgaaccaa accgccctgt tcggacgttt
     9541 tgccgccctc ctcgaaaccc tgtcggatat tgtacggata tggcggcagc ccgcaacgat
     9601 cggcgaatgg gtggcgcgtt gccgggattt gcttgaaaca ttgttccaag ctgaagccga
     9661 tgaccaaaag tcagtccaaa accttgaaaa cgaatgggtc aaatggcagg cggaaacaga
     9721 attggcgcaa ttttccggac agttgccgca acaaaccgtc atccgccata tccgacgttt
     9781 cctcgacagc gaaagcgagg caggcttttt acgcggcggc atcacctttt gcagtatggt
     9841 gccgatgcgg agcctgccgt tcaaagtcat ctgcctgttg ggtttgaacg acggagattt
     9901 tccccgcaat accaaagccg ccgtattcga cctgattgcc aaacatcccg ccaaaggcga
     9961 ccgcgcccgc cgcgatgacg accgctacct cttcctcgaa gccctcatca gcgcgcgcga
    10021 aatcctctac ctgtcctaca tcgggcgcga catccgcaaa gacgaagagc ttgctccgtc
    10081 ttcgctgttg ggcgaactca tcgacacagt tgccgctatg gcgggcatcg gtagccgcca
    10141 acttgcacaa aactggatag aacagcatcc gctgcaagcc ttctcgcgcc gatattttca
    10201 agaaggcgga cgttcagacg gcatattcgg cacgcgtacc gactacgcca ctgcgctcgg
    10261 acaaacgccc gaaccgccgc aacccttttt cgaccaaccc gtagaaaacg ccgaacctgt
    10321 tgccgaaatc ggacaggacg aatttatccg tttctggcgc aaccccgtca aagtatggct
    10381 tcagcagcag cttgcgtgga gcgaacccca tatcggcgaa gcctgggagc ctgccgaacc
    10441 cttcgagccg caacacgccg atcaaatcgc cgaaacctac atcgaagcac ggcgcgaagg
    10501 acgggatttt gcccaaaccg ccgcccgcat cggggcggaa agcctcctgc cgtcgggaga
    10561 gttgggcaga ctttggcagc agaacttcca aactgctgcc aaacaaatcg acacggcggt
    10621 tttaaacagc cccaaactgc caccgctttc atatgccata ccgtcggacg ggcaaatcct
    10681 gaaaggcagc ttgggcaatc tgtaccgctg cggacaagtg ttttacgcct acggcaaacc
    10741 caacgcgccg caacgtatcg cttttctgct ggaacacctg atattttgcg ccgttatgcc
    10801 gtctgaagcc gaaacgcggc aaacctttat cgtccaatcc ggagaaaccg aaatattggc
    10861 ggaaatcgcg caagacaggg cattgcagct attgtcggaa tggatggcgt ttttcaatat
    10921 cgggcaaaac cgcccgctgc cgttttttgc caagacctcg cttgccgctg ccgaagcgtt
    10981 tgcccaaaaa caagattggg aagccgccct gaaaaaagcc caaaccgcct attacggcaa
    11041 caaagtcagc aaagggcaga aagactatac cgaagtcgcc ctcgtgttcg gcaacgcaag
    11101 ccaaaaccca ctcgaacaac ccctgtttga aaacctcgcc cgcctgcttg ccgacacgct
    11161 tgccgcagcg gaaaaaaggg aaggggccgg agcagcctga cgggatggaa aggcaaatgc
    11221 cgtctgaaaa cagcaaaaag gttttcagac ggcattttgt ttatcgtgtt taaggtgcgg
    11281 gatagaatgt gggcgcgccg ggaccgacgg gcaggcccaa aacaaatacc caaatgcaga
    11341 ataaggcaat ccacgcaatc aagaagaaag cggaatacgg caacatcata gaaatcagcg
    11401 tacccacgcc cgcatctttt ttgtatttga tcaccgtcgc cataatcagc ccgaaataac
    11461 tcatcatcgg cgtaataata ttggtaacgg aatcaccgat gcggtaagcg gcttgaatga
    11521 cttcgggcgc gtagccggcc aacatcagca tagggacgaa aatcggcgca gttaccgccc
    11581 attgcgcgga ggcggagcct atcatcagat tgataaaagc acaaattaaa ataaaaccga
    11641 taaacaacac gctgccgccc aagccgactt cttttaagaa cgtcgcccct ttaacggcaa
    11701 tatattgccc aatattcgtc caattaaaaa atgcgacaaa ctgtgcggca aaaaagatga
    11761 tgaccaaata aagccccaga gtactcatcg attcggccat cgcattaacg acttcctgtt
    11821 cgccgcgcaa acttcgggtt acccggccat aaacaatgcc cggcagtgca aacaacaaga
    11881 aaataaaaac aacaattgat tttaaaaacg gcgaaccgga aaccaatcct gtttcaggat
    11941 gacgcaaaat accgtcggca gggacgatgc tccaagccaa tagggcggat aaggcaacaa
    12001 acaccacgcc agcccaaatt aatcctttat attccaaagg cgtgatttca ttggaatgtc
    12061 gaatgtcttt ttcttcttgt gacaaatctg attgataagg gcccaattgc ggttcgacga
    12121 ttttttcagt aacaaaataa ccaatcaaag caatcacaaa cgtactggct accataaaaa
    12181 accagttggc ttcagggcct acgacgtagt cgggatggat gatttgcgcc gcctgttggg
    12241 tgatgcctgc caagagcgga tcgattgtgc ctaagaacag attggccgaa taaccgcccg
    12301 aaacgccggc gaaagccgca gccagaccgg caagcggatg gcggccgagg gaatgaaaga
    12361 tgatggcgga caaagggatt aggacgacat agcccaattc agaagcggta ttagataaaa
    12421 tccctgtaaa aacaaccata aaagtagtga gtttgcgtgg agattttgtg agcaataagc
    12481 gcattaatgc ggaaatcaag cccgattttt ccgcaatccc cacgcccaat aaagaaacca
    12541 acaccgttcc caacggcgcg aaaccggtga aatttttaac ggtatgcgtc aggattttga
    12601 tcaaaccgtc agcatcgagc aggctgacaa cgtgaatcaa accgtcatcg gcacgtcctt
    12661 tcgcaccaac agggcgcgga tcggggacgg atagttcgaa atacgcaccg gcggcagagg
    12721 caatcagcaa taacacaatg aaaataataa aaagcgtaac cgggtgcggc aacatattgc
    12781 ccagccattc gactgtgcgt aaaaatcgtc cgtcccgttg cgtatcggtt tgactcatct
    12841 gcttctcctt aaaaaaaata tattgagtgc attaaatttt tgaatgtaac atgaagtgtt
    12901 ttgtaagcaa actaaaataa tcgtatatgt atataaccgt aatagattaa aacagaaaat
    12961 gcccacatcg ttattctcat aaaggcggta atccgaaaac ttgacgttaa agccttatca
    13021 ggaatgactg gaactcaaaa aaacggattc ccgcctgcgc gggaatgacg ggattttcgg
    13081 tttttgtttg caagaatgcc ggagaagaat gcagtttaca ttttgaatgg tattgttatt
    13141 aattgtaaat aaatattgga aggtaaatga tatgaaaaat gaaattcaaa aaatcatgga
    13201 caaatataat ccatggcatg aagatgattt tgagtcgtat gaagacattg ccagagatgt
    13261 atcgctgacg acagataaaa cgttcattga acattatttg ttagaagttt attcagaaga
    13321 aaacggacat tttgaccaag agaatgtcca tgcaatgata gaagaaatta aaaatgcaat
    13381 ttagtgaat
//
LOCUS       DAXHKG010000051        13241 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.051, whole genome shotgun sequence.
ACCESSION   DAXHKG010000051 DAXHKG010000000
VERSION     DAXHKG010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13241
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.051"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(44..811)
                     /locus_tag="ACFMWP_001096"
     CDS             complement(44..811)
                     /locus_tag="ACFMWP_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFC5891708.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGALTALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVYETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(899..1726)
                     /gene="mutM"
                     /locus_tag="ACFMWP_001097"
     CDS             complement(899..1726)
                     /gene="mutM"
                     /locus_tag="ACFMWP_001097"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HFC5891709.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1778..2443)
                     /locus_tag="ACFMWP_001098"
     CDS             complement(1778..2443)
                     /locus_tag="ACFMWP_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFC5891710.1"
                     /translation="MDSWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRQLADVGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            2622..4598
                     /locus_tag="ACFMWP_001099"
     CDS             2622..4598
                     /locus_tag="ACFMWP_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC5891711.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4666..5358
                     /locus_tag="ACFMWP_001100"
     CDS             4666..5358
                     /locus_tag="ACFMWP_001100"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HFC5891712.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMIAAVGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            5899..7214
                     /locus_tag="ACFMWP_001101"
                     /pseudo
     CDS             5899..7214
                     /locus_tag="ACFMWP_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519747.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            7458..8114
                     /gene="cmk"
                     /locus_tag="ACFMWP_001102"
     CDS             7458..8114
                     /gene="cmk"
                     /locus_tag="ACFMWP_001102"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HFC5891713.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYREV
                     "
     gene            8270..9955
                     /gene="rpsA"
                     /locus_tag="ACFMWP_001103"
     CDS             8270..9955
                     /gene="rpsA"
                     /locus_tag="ACFMWP_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HFC5891714.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            9966..10280
                     /locus_tag="ACFMWP_001104"
     CDS             9966..10280
                     /locus_tag="ACFMWP_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HFC5891715.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(10630..11037)
                     /locus_tag="ACFMWP_001105"
     CDS             complement(10630..11037)
                     /locus_tag="ACFMWP_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HFC5891716.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            11185..12294
                     /locus_tag="ACFMWP_001106"
     CDS             11185..12294
                     /locus_tag="ACFMWP_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HFC5891717.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINKAFDLMHEGKSIRAVIHY"
     gene            12303..13130
                     /gene="fghA"
                     /locus_tag="ACFMWP_001107"
     CDS             12303..13130
                     /gene="fghA"
                     /locus_tag="ACFMWP_001107"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HFC5891718.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDSSPRGEQVPNDDAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
BASE COUNT         3511 a         3633 c         3047 g         3050 t
ORIGIN      
        1 atccgcaaaa gcgaatcata ctgccacatt ccggcaaccg gtttcagaca gcgatatccg
       61 catcgtcggc gacaacggca cggatgcttt cttcgatttt atcttttaaa gcataacggt
      121 cttcgctttc cgccgcatcc gccacgcaaa cgaaatcgac ttttatcgtt aattttttca
      181 tagacacaat gcgccacagg caggtcggca aaccgacatc ggcatatgag ggacgagccg
      241 tcctttttcc cgtttcgtca taataacgca gcgcgaccgc caaaaccttt gcccccgcat
      301 caatggcgga ttggaacagc gcggctttga acggcaggag ccccagtccg gaggaagtcc
      361 gcgcttcggg gaaaaaactg acgttttgac cgcgttgcaa ggtttcgtag acggcgcggt
      421 taatcggttc gatgtcgcgc cgcgaattgc ggttgatgaa caccgttccc gcgttctgcc
      481 ccatcttgcc caataccggc cagcttttga tttcctgctt ggcgataaag ctgctcggat
      541 aaaccgcgct catcgcgaaa atatccagcc aggacacgtg gttggcggca accaagacac
      601 cgttcggatg ttcgggtgcg ggcctgccca cctccaatcc gatatccaaa gccgtcagag
      661 cccccctgcc caactcgatt accgcccgat tgcgcgactc ggggcagccg ccgtcaatac
      721 cgcgcaggtt tttgccggtt ttgaatagcc agaccgtcaa gcggcacaag cggcgcagac
      781 gtgtaaaaaa tgaagcttta tttgaagaca tgaacaattc tttcccgata atcggtgttt
      841 gttgttgaaa cgttcggacg gcataccgat aaaatgccgt ctgaaaccgt tttccgccct
      901 atttctgaca attcgggcag taaaacgtgc cgcgctgccc caaagtttct ttcacaacca
      961 aaccgccgca ctgggggcac ggctgattgt gccgcccgta caccgtatat tcctgttgga
     1021 agtagccact tttgccgtcg ctgtccacaa aatccctcaa ggtactgccg cccgtttcaa
     1081 tggcgcgccg caacaccgct ttgacggttt caaccaaaag cgcacactct ttctttttca
     1141 gacggttggc aggacggtgg ggcgaaatgc ccgctctgaa caggctctcg ttggcataaa
     1201 tgttgcccac accgaccacg accgcattgt ccatcagggc aagtttgacc gcgcgtttct
     1261 gcgccttcag cctcacatac agataatccg cacaaaatgc ctccgacaaa ggctccggcc
     1321 ccagtttttc caacagcgga tgatgttctt cgattccctc ataccaaagt atcgcgccga
     1381 actttctcgg atcgcggtaa cgcatgaccg tgccgtctga aaacacaata tcgacgtgat
     1441 cgtgtctgtc cggcctgccg atacgtccgt ccgacggcgt aaaaatccgc aagctgcccg
     1501 acatccccaa gtgaatcagc aaaatccccg tttggaaacg gacaatcaga tatttggcac
     1561 gcctgccgca ggacaaaacc tgccgaccgg acaaaatctc ccccaaatcg ggattgatct
     1621 gccagcgcag cttcaattgg cgcaatacca cggcttccac cgttttccct tcaatatgcg
     1681 gcgcgatgcc gcgcaacgtc gtttccactt ccggcaattc cggcataacc cctcccgaca
     1741 tttcttctga cagatgccgt ctgaaagacg gctgtcccta atccgcaatc cttgccgcac
     1801 ccgccgcaag ggctttgccg cccaaatacc cgtcccacgc gggcaggggc gttacgcccg
     1861 ccgccctttt gaccaaaacc aaaccgtaca ctgcggcaca ctgcggccac caacggtcgc
     1921 ccgccttttc cataaaccgc caaaagcgta tttgcccgag cgacgaaacg ggcggcagat
     1981 acaccataaa tttcccaaat tcaatatcga aaccgacatc cgcaagctgc cttttcaact
     2041 cgggcagcgg cagacagaag cgtttttccg gcaggcgttc gccgtcaaac caacggctga
     2101 atccccagag cgaatacgga ttgaaacccg tcagcatcaa acgtccggac ggtttcaata
     2161 tccggtgcgc ctcggacagg atttgcgaag gaacaccgcc ttcaagcgta tgcggaaaaa
     2221 gcagcatatc cgcagaaaca tccgccaaag ccatattttc cgccgacatc gacatatctc
     2281 gcggcacaca gacaacatct tcagacaggc tcagccacgg accgcccacc tgaaccgcac
     2341 acattcccga aaaacggtat gaatctagat accgcccgaa gaaatcctgt tccaattttg
     2401 caacataccg ccccatcgcc gtatcttcaa accatgaatc catattgcgt ccgtttcaaa
     2461 cagattgcct gccgatattc tattccaaac aggatttctg tcaaaaaaca catcggccgc
     2521 ccatttccga atccgcataa agttcctgta aaacttgacg ctttttcagt caaacagtac
     2581 catcggacga taaaatatgt ttattccgcc gaatataaat catgtccaaa ctcaaaacca
     2641 tcgctctgac cgcatcaggt ctgtccgttt gtccgggttt cctatacgcc caaaacacct
     2701 catcacacca aatcggtttg gcgattatgc gcttaaactc ttcaatactc gacctgcccc
     2761 cgacaaaaca atatttccaa tccggcagcc tgtggagcga gctgcgccaa ggcttccgga
     2821 tgggcgaagt caatcccgaa ctggtacgcc gccacgaaag caaattcatc gcaagccaca
     2881 gctatttcaa cagggtcatc aaccggagta gaccctatat gtaccatatc gccaacgaag
     2941 tcaaaaaacg caatatgccc gccgaagccg ccctgcttcc cttcatcgaa agcgcgttcg
     3001 tcaccaaagc caaatcacac gtcggcgcat caggattatg gcagtttatg cccgctaccg
     3061 gcaggcatta cggcctggaa aaaacaccgg tttacgacgg caggcacgac gtttacgccg
     3121 ccaccgatgc cgcactcaac tatctgcaat acctctatgg actgttcggc gactggccgc
     3181 ttgcctttgc cgcctacaac tggggtgaag gcaacgtcgg acgcgccatc aaccgcgccc
     3241 gcgcccaagg gctcgaaccg acctacgaaa acctgcgtat gcccaacgaa acgcgcaact
     3301 atgtccccaa gctgctcgcc gtgcgcaaca ttattgccac tccccaatct ttcggcatga
     3361 atatcagcga catagacaac aaaccgtatt ttcaggcagt cgaaccggat cgtccgctcg
     3421 acaacgaagc catcgcccgg cttgccggca tcacgcaaag cgagctgctc gccctaaacc
     3481 ccgcattcaa cgtccccgcg tttatcccca aaagcaaacg caaactgctg cttcctgtcg
     3541 cgtccgtaca aaccttccaa agcaactacc tcaacgccgc acccgacagc ctgttttcat
     3601 gggaagtcta tacgcctgcc gccaaaacca gcctgtccga catctcgacg gcaaccggca
     3661 tgagcattgc cgacatcaaa cgcctcaaca acctgaacgg caaccttgtc aacgcaggac
     3721 gcagcatcct tgtcgccaag aacggcaaaa cccttcagac ggcatcggaa tccgtcgttt
     3781 ccatcgacat cgacaatacg cccgacacct accgttccaa tatgccggca ggcacggtga
     3841 acgtcggcat tgcccgaatc cgacccgccg ccgcacagac agcggacatt accgtcgcac
     3901 ctttgccgca gaaaaccgtc cgtacggaac ccgatcccct tgtccgtatt gccgaacctg
     3961 cccttgcgac agccgcagcg caacctcaaa ccgaaaaaca gaccgccatg ccgtctgaaa
     4021 cccaaaccgc aacactcgcg cagatcatcc cccaaaacga catgcaggcg gcagatgaac
     4081 tcatgcagct tgttgcccga aacaacctgc gccgacaggc tgaagaaacc atctccgccg
     4141 tcatcggcac gcctgacaca gttgccgaac acaacatttc ctcatctccg caacataccg
     4201 ttgccgccga cggcaaacgc cgggcacgtt tggaaacgcg cgtagccaaa gctgccgacg
     4261 gcgaagccga aatctccccg ctccatgcca gcatccaccg cgttgtagaa ggcgacaccc
     4321 tgttcaacat tgccaaacgc tacaacgtca gcgtagccga cctgattgtc gccaacaaca
     4381 tcaaaggcaa caccatccaa aaaggacagg tactccgcct ggcgcaggca gcccctgccc
     4441 aaacccgtat tgaaaaagta tcctacaccg cgcgcaaagg cgacaccttc aaaagtatcg
     4501 ccgcgcgctt caatatccat atcgacgaca tccgccggct caatcccaac ctgaacacca
     4561 tcaatccggg acagagggtc aaactgattg gaagctgatt cggatacggc acatgacagg
     4621 actttctcag tcctgtcttt ttcatcccac atttcccata ccatcatgaa actcatcaaa
     4681 tacctgcaat atcaaggcat aggaagccgc aagcagtgcc aatggctgat tgccggcggt
     4741 tatgttttca tcaacggaac ctgcatggac gacaccgatg cagacatcga ttcctcatct
     4801 gtcgaaacgt tggatattga cggggaagca gtaaccgtcg ttcccgaacc ctatttctac
     4861 atcatgctca acaagcctga agattacgaa acttcgcaca aacccaagca ctaccgcagc
     4921 gtattcagcc tgttccccga caatatgcgg aacatcgata tgcaggcggt cggcaggctg
     4981 gatgcggata cgaccggcgt attgctgatt accaacgacg gcaaactgaa ccacaacctg
     5041 acttcgccga gcagaaaaat tcccaagcta tacgaagtaa cgctcaaaca ccccacagga
     5101 gaaacgctct gcgaaacctt gaaaaacggc gtgctgctcc acgacgaaaa cgaaaccgtt
     5161 tgtgccgccg atgccgtttt ggaaaacccg accaccctgc tgctgaccat taccgaagga
     5221 aaataccacc aagtcaaacg catgatcgcc gccgtcggca accgcgtgca acaccttcat
     5281 cgtcggcgat tcgcacattt ggaaacagaa aacctgaaac ccggcgaatg gaaatttatc
     5341 gattgtccaa aattctgaaa caaaattcca taatttccct atattcaact atatgcttat
     5401 taaataagta gttttacaaa aattaactca aaaaaaaaca gttagcttgc gatataattc
     5461 gcttgtctga gtaacgcctg ttcaagcagg cttatgagta agacgttttc cccgtaatgt
     5521 gttttgccat ctatacttct cccccttgta tagatggttt ttttatcttc gtttactaca
     5581 catactacat atgttactga cgcagcattc ccgatcatat gacatatgaa attttatttc
     5641 accgtcccag tgtagaaaaa taaacgattc atctatctat aaaatctgat tcaatccttg
     5701 ttgatttatg caaatcagaa atatccacta taaaatataa ctctattagt gaaaataact
     5761 acacacttaa aaaacaatca gtcagttcct gttaaaaaac gcgtgtagaa tttccgcttt
     5821 atctcaatcg gacacggttt caatatgtct tccccttcaa ataccaatcg tcaaacctga
     5881 tccagccgat taacctatat cctgaccgtt gccggcgcga ctgtcggttt cggcgcgacg
     5941 tggcgtttcc cgtatttggt cggtgaaaac ggtggtggcg cgtatgtgtt tttattctgt
     6001 atcgcgatgc tggttatcgg cattccgatg attttggtgg aaaatgtcat cggacggcgc
     6061 aaaggcgtga acgcgctgga tgcgttcggc ggtccgatga acggcaaacc cattgctaaa
     6121 atttggaaac tggtcggctg gatggggctg ctcggcgcgt tcggcatcat ggcttattac
     6181 atggcactcg gcggctgggt aatcagctat atcgttaata ttattggagg aaatttgaat
     6241 atttccagcc ccatcgacgg tgtggttaca aaaggcttct ttgccgaaca cattgaaaca
     6301 gcccttggga aattgcgttt tatacgctgc tttttgtcgc cgtgaaccaa tggattttgg
     6361 tcaaaggcgt tatcggcggc attgaaaaag cggcaaaata gctgatgccg ctgctgtttt
     6421 tgttcctaat cgcgatggtc gtccgcaacg ttacccttcc gggcgcaatg gaaggggttg
     6481 ctttctatct gaaacctgat ttcagcaaga ttaccgccga actgttcgtc ttcgttttgg
     6541 ggcaggtatt ttttgccctg agcctgggtt tcggcgtgat gattaccttg tccagctatt
     6601 tggataaaaa cgaaaatcta gttcagacgg cagttatcac ggcaattacc aataccatca
     6661 tcgccatact tgcgggcttt atgattttcc cgtcgctctt cagcttcggc gttgcccccg
     6721 attccggccc gactttggtg ttccaaagct tgccgattgt gttctcacat atgtgggcgg
     6781 gatctgtgtt cgccgtgatt ttcttctcgc tgctcctgat tgccgcgttg acaacttcgc
     6841 tgaccattta tgaagtgttg attacgacca ttcaggaaaa aaccaaaatc cgccgtaccg
     6901 ccgcgattac gattgtattg gctgccatct tcattttcgg caacatcccg tccattttga
     6961 gctacggccc ttggaaagat gtttccatat ttggcaaaaa tatttttgac gcttttgact
     7021 acatcagcgg caacatcttg tttatgctga ccgcgctcgg ttccgcgctg tttgtcggtt
     7081 ttgtgatgaa ggacgaagcg aaggaagaat tgctttataa aggcaaccat acgacggtca
     7141 atatttggtt tgcctatgtg aaatacctcg tgccgttggt gattctgctg atttttatca
     7201 gcaacctgtt ctaatccgca gcaatcaatg ccgtctgaag gtcatacctc tttcagacgg
     7261 cattgcattg atgcccgcca caatacccgc aacgccggaa tccgaaccgg cttgccggct
     7321 tctgtcggat gtttccgggc aggcggcgtt ccgtctgctt agacaatcgt cctttaaaac
     7381 aggtagaatc cgccccaacg ggaaacacat ccttcagacg gcaaaaccca taccccaaac
     7441 catcaggaat cccccttatg aacagacaaa aagtcatcgc catcgacggc ccgggcgcat
     7501 cgggcaaagg cacggttgcc gcccgcgttg ccgccgcatt gggatacgat tatctcgata
     7561 ccggcgcact ctaccgcctg actgccctat atgcacaaaa acaaggcgtg ggatggcacg
     7621 atgaagaaaa cgtttccgaa ctggcaaaaa aactgcccgc cgtattttca ggcagccgca
     7681 tcctgctcgg cggcgaagac gtttcagacg gcatccggac agaagccatc ggcatgggcg
     7741 catccgcagt cgcacagttg cctaaagtcc gcgccgccct gctgcaacgc caacgcgatt
     7801 ttctgaccga aaaaggactg gttgccgacg gacgggacac cggatcggtc gtcttccccc
     7861 aagccgaact taaaatcttc ctgacggcag aatccaaaat ccgtgccgaa cgccgcgcca
     7921 aacaaatcgg catcccctgc gaaggtttgg cattcgagcg catcctgtcc gacatcgaag
     7981 ccagagacga ggcagaccga aaccgcaaag ttgcccccct gaaacaacag cccgatgccc
     8041 tgcttttgga cacaagccgc ctgactatag aagaaactgt aaaaaaagtg cttgattggt
     8101 atcgtgaagt ttaaattttc aggtataatc gcacaaatta cgtttcagac ggcataaaaa
     8161 tcccccatat gccgtctgaa accttatgta cccgtctgcc ctgccaagga cggcagatat
     8221 ccaccaaccc accccgcacc ccttggcggt gtaccgaaaa gagttatata tgtctatgga
     8281 aaattttgct cagctgttgg aagaaagctt taccctgcaa gaaatgaacc cgggtgaggt
     8341 gattaccgct gaagtagtgg caatcgacca aaacttcgtt accgtaaacg caggtctgaa
     8401 atcagaatcc ctgattgatg tagctgaatt caaaaacgct caaggcgaaa ttgaagttaa
     8461 agtcggcgac ttcgttaccg ttaccatcga atccgtcgaa aacggcttcg gcgaaaccaa
     8521 actgtcccgc gaaaaagcca aacgtgcagc cgattggatt gccctggaag aagccatgga
     8581 aaacggcgac atcctgtccg gcatcatcaa cggaaaagtc aaaggcggcc tgaccgttat
     8641 gattagcagc atccgcgcat tcctgccggg ttctttggtc gacgtacgtc ctgtaaaaga
     8701 cacttctcac ttcgaaggca aagagatcga attcaaagtg atcaaactgg acaaaaaacg
     8761 caacaacgtc gttgtttccc gccgcgccgt tctggaagcc actttgggtg aagaacgcaa
     8821 agccctgctg gaaaacctgc aagaaggctc cgtcatcaaa ggcatcgtta aaaacattac
     8881 cgattacggt gcattcgttg acttgggcgg catcgacggt ctgttgcaca tcaccgattt
     8941 ggcatggcgg cgcgtgaaac acccgagtga agtcttggaa gtcggtcagg aagttgaagc
     9001 caaagtattg aaattcgacc aagaaaaaca acgcgtttcc ttgggtatga aacaactggg
     9061 cgaagatcct tggagcggtc tgacccgccg ttatcctcaa ggcacccgcc tgttcggcaa
     9121 agtatccaac ctgaccgact acggcgcatt cgtcgaaatc gaacaaggca tcgaaggttt
     9181 ggtacacgtc tccgaaatgg actggaccaa caaaaacgta cacccgagca aagtcgtaca
     9241 actgggcgac gaagtcgaag tcatgatttt ggaaatcgac gaaggccgcc gccgtatctc
     9301 tttgggtatg aaacaatgcc aagccaatcc ttgggaagaa tttgccgcca accacaacaa
     9361 aggcgacaaa atctccggcg cggttaaatc cattaccgat ttcggcgtat tcgtcggcct
     9421 gcccggcggc atcgacggtt tggttcacct gtccgacctg tcctggaccg aatccggcga
     9481 agaagccgta cgcaaataca aaaaaggcga agaagtcgaa gccgtcgtat tggcaatcga
     9541 cgtggaaaaa gaacgcatct ccttgggtat caaacaactg gaaggcgatc cgttcggcaa
     9601 cttcatcagc gtgaacgaca aaggttcttt ggttaaaggt tccgtgaaat ctgttgacgc
     9661 caaaggtgct gttatcgccc tgtctgacga agtagaaggc tacctgcctg cttccgaatt
     9721 tgcagccgac cgcgttgaag atttgaccac caaactgaaa gaaggcgacg aagttgaagc
     9781 cgtcatcgtt accgttgacc gcaaaaaccg cagcatcaaa ctttccgtta aagccaaaga
     9841 tgccaaagaa agccgcgaag cactgaactc cgtcaatgcc gccgccaatg cgaatgccgg
     9901 caccaccagc ttgggcgacc tgctgaaagc caaactctcc ggcgaacaag aataaggttg
     9961 cagacatgac aaagtctgag ttaatggttc gtttggcaga agtgtttgcc gccaaaaacg
    10021 gcacgcatct tctggcaaaa gacgtagagt acagcgtaaa agtcttggtt gacaccatga
    10081 ctagatcgct tgcccgaggt caacgcatcg aaatccgcgg tttcggcagc ttcgatttga
    10141 accatcgtcc tgcccgcatc ggtcgcaatc ccaaaaccgg cgagcgtgtg gaagtacctg
    10201 aaaaacatgt accccacttc aagcccggta aagaattgcg cgagcgggtc gacttggctt
    10261 taaaagaaaa tgccaattaa accttagcat caaaacgccg ctgttacgcg gcgttttttc
    10321 tgtggtttaa cttcatccgc tgcttcaata ccttgagcca agcaagcaac ggattagagc
    10381 gtggattttt tatagtggat taacaaaaac cagtacggcg ttgcctcgcc ttagctcaaa
    10441 gagaacaatt ctctaaggtg ctgaagcacc aagtgaatcg attccgtact atttgcactg
    10501 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatatcatt gcttacaatc
    10561 cgctttttaa acaacaaatt tttgatttct attacgaaca ggacaaaaat cctgcttatt
    10621 gcactaaaac taagccgttt caggaatttg cggcaaattt acggctttta ccgaacctaa
    10681 tgctttcgct ttttggtaaa acgccaattt gtattcaagc aaatctaaat agcgttttaa
    10741 ttcggcaatt tgacacttca cattttctat ttgattttca aacaaggaaa ggcgttcttc
    10801 aatggtatcg tcgccaatga cggtacattc cgcaaagcgt ttgatgtctt ttaagctcat
    10861 tcccgtattt ttcaagcatt gcaataagcc caaccattgc aaatcgttat cggtaaaaca
    10921 gcggttaccg tattcatcac gtccgatatt gggcaacaaa ccttctttgt cgtaaaaacg
    10981 tagggtgtgg gcggagatgc ctattttttc ggcggctttg gcagtagtat aagtcatttt
    11041 ccctccttct aaacaaaaac agtaaaaaac acttgcttta gagttaactc taaagtgtaa
    11101 actgttgcta tgttgctcag gcaaggcaac tttgtcaatg aattaagagg aaagacaatg
    11161 gaaatgaaac aagccgattc aaccatcaaa tctcgtgcgg cggtggcatt cgcccctaac
    11221 caacccttac aaattgtgga aatcgacgta gaaatgccgc gtaaaggcga ggtgttaatc
    11281 cgcaataccc acactggcgt gtgccatact gatgcgttta cgttatcagg aagcgatcct
    11341 gaaggcgtat tccctgtggt gcttggacac gaaggtgcgg gtgtggtcgt tgctgtgggc
    11401 gaaggtgtgt caagcgtaaa accgggtgat cacgtgattc cgctttacac cgccgaatgt
    11461 ggcgaatgtg agttttgttg ttcaggtaaa accaacttgt gcgtctcagt gcgtgataca
    11521 caaggtaaag gcttaatgcc ggacggcacg acgcgttttt cttatcaagg tcagccgatt
    11581 tatcactata tgggctgttc gactttcagt gaatactccg ttgttgccga agtttcactg
    11641 gcgaaaatca accctgaagc caaccatgaa caagtatgtt tgctcggctg cggcgttacc
    11701 acaggtattg gtgcggtaca taatacggca aaagtgcaag aaggcgactc tgttgccgtg
    11761 tttggcttag gcgcgattgg tttggcggtg gtgcaaggtg cgcgtcaagc caaagccggc
    11821 cgcattatcg ccattgatac caatccatca aaatttgagt tggcaaaaca gtttggtgca
    11881 acggattgtt tgaacccgaa cgattacgat aaaccgatca aagatgtgtt gttagacatt
    11941 aataaatggg gcattgacca tacctttgaa tgtatcggca acgtaaacgt aatgcgtcag
    12001 gcattagaaa gtgcacatcg tggttggggt caatccatta tcatcggcgt agcaggtgca
    12061 ggacaagaaa tttcaacgcg tccgttccag ttggtaacag gtcgtgtttg gaaaggttca
    12121 gcatttggcg gtgtgaaagg tcgctctgaa ctgccgaaaa tggtggaaga ttcaatgaaa
    12181 ggcgacattg agttagaacc gtttgtaacc cacacaatga cactcgatca aatcaataaa
    12241 gcctttgact taatgcacga aggtaaatcg atccgcgccg ttattcacta ctaaggtatg
    12301 cgatgaaact gattgaacaa catcaaattt ttggcggttc gcaacaagtt tgggcgcatc
    12361 atgcccaaac gctgcaatgc gaaatgaaat ttgccgtcta tttgccaaat aatccagaaa
    12421 atcgaccgct tggtgtgatt tattggcttt ccggcttgac gtgtacggaa caaaatttca
    12481 ttaccaaatc aggctttcag cgttatgcgg cagaacatca agtaattgtg gtggcctccg
    12541 atagcagccc tcgcggagag caagtgccga acgatgatgc ttacgattta ggacagggtg
    12601 caggctttta tttgaatgcg accgaacagc cttgggcggc gaattatcaa atgtatgatt
    12661 acattttgaa cgagctgccc cgtctgattg agaaacactt tcctaccaac ggcaaacgtt
    12721 ccattatggg gcattcaatg ggcggacacg gcgcattggt attggcgctg cggaatcagg
    12781 aacgttatca aagtgtttct gccttttcgc ctattttatc gccaagcctc gtgccgtggg
    12841 gagaaaaagc ctttactgct tatttaggga aagaccgtga aaaatggcag caatatgatg
    12901 cgaactcact cattcaacaa ggctataaag tgcaaggtat gcgcatcgat caaggcttgg
    12961 aagatgagtt tttgccgaca caattgcgta ccgaagattt tatcgaaacc tgccgtgcgg
    13021 caaaccagcc ggtcgatgtg cgtttccata aaggctacga tcacagctat tacttcatcg
    13081 ccagttttat tggcgagcat attgcttatc acgccgcgtt tttgaagtaa accaaagagc
    13141 gttcagtgtt caaagcagtt ttgggatagc cggcacgagg gcggtaagaa gtgccggcat
    13201 aaacgtatgc cgtctgagcc ggaaggagcc gactctacgg a
//
LOCUS       DAXHKG010000052        13016 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.052, whole genome shotgun sequence.
ACCESSION   DAXHKG010000052 DAXHKG010000000
VERSION     DAXHKG010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13016
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.052"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            397..5103
                     /gene="iga"
                     /locus_tag="ACFMWP_001108"
     CDS             397..5103
                     /gene="iga"
                     /locus_tag="ACFMWP_001108"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HFC5891719.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKDKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADKIKQRDNAGTIKGNGEHHWNITFG
                     TNSKIGSTAVRLAGNEKDANNGQNVTFEDNGTLVLDQNINQGAGGLFFKGDYTVKGIN
                     NDITWLGAGIDVTDGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVI
                     LNQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFE
                     HIRNVDEGARIVNHNTSHASTITLTGKSLITNPNSLSVHSIQNDYDEDDYSYYYRPRR
                     PIPQGKDLYYKNYRYYALKSGGSVNAPMPENGVTENNDWVFMGYTQEEAKKNAMNHKN
                     NQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGKISVTQGNVLLS
                     GRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEIAVNQSASFSSGRNV
                     SNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKALNSFGATQINGN
                     VNLNQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNLSLADSHIHLNN
                     ASDAQSANQYHTLKINHLSGNGHFHYLTHLAENLGDKVLVKESASGHYQLHVQDKTGE
                     PNQEGLNLFDASSVQDRSRLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRV
                     KPVPSPATNTASQAQTDSAQIAKPQNIVVAPPSPQANQAEEAKRQQAKAEQVKRQQAE
                     AERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEKEREAAELSAKQKVEA
                     EREAQALAVRRKAEAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKA
                     EAEREAAELAKQKAEEEGRQAAQSQPKRRNRRAIPPELSSDATTRALPRIARNSNPDA
                     SDYEEIPLDALEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQPQ
                     AQAAAQPQAQAVAQADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEK
                     NSVWMSNIGYGRDYASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQ
                     ASGKNTFVQANLYGKYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGN
                     TLKINQFEIVPSAGIRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLT
                     VKPLLSAAYFANYGKGGVNVGGNSFAYKADNQQKYSAGAALLYRNVTLNVNGSITKGK
                     QLEKQKSGQIKIQIRF"
     gene            complement(5282..6484)
                     /gene="trpB"
                     /locus_tag="ACFMWP_001109"
     CDS             complement(5282..6484)
                     /gene="trpB"
                     /locus_tag="ACFMWP_001109"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HFC5891720.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPE
                     FWEAFRHDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVESGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(6669..7379)
                     /locus_tag="ACFMWP_001110"
     CDS             complement(6669..7379)
                     /locus_tag="ACFMWP_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC5891721.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFGDADYFKVPSNGEAAHS
                     EKAFDAEKIKAFLHERGIASCPTVLKAVRQHGNASDKFLKVVETVDLAAVLAKIPECR
                     HICTTGGKATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKK
                     AAAYRAFFEMAGLCEKQL"
     gene            7576..8355
                     /gene="rsmA"
                     /locus_tag="ACFMWP_001111"
     CDS             7576..8355
                     /gene="rsmA"
                     /locus_tag="ACFMWP_001111"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HFC5891722.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            8528..9256
                     /locus_tag="ACFMWP_001112"
     CDS             8528..9256
                     /locus_tag="ACFMWP_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC5891723.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            9329..9688
                     /locus_tag="ACFMWP_001113"
     CDS             9329..9688
                     /locus_tag="ACFMWP_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891724.1"
                     /translation="MYFVDRTAVVLKPTARFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            9693..10133
                     /locus_tag="ACFMWP_001114"
     CDS             9693..10133
                     /locus_tag="ACFMWP_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HFC5891725.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LVASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGKTVSQCIIPDMTDKESYRRLKVWVLWRQPKKTAETDTPS"
     gene            10165..11439
                     /gene="folC"
                     /locus_tag="ACFMWP_001115"
     CDS             10165..11439
                     /gene="folC"
                     /locus_tag="ACFMWP_001115"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HFC5891726.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKVGTLTSPHLLRYNERIAVNAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLVAHAEAIGAKLLMVQRDF
                     EFHALENIQWNYRFHPQHSDDPTRNRNALPFPALRGAYQLSNAACTLTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHGIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            11452..12450
                     /gene="ftsN"
                     /locus_tag="ACFMWP_001116"
     CDS             11452..12450
                     /gene="ftsN"
                     /locus_tag="ACFMWP_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC5891727.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETNGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKETKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            12443..12940
                     /locus_tag="ACFMWP_001117"
     CDS             12443..12940
                     /locus_tag="ACFMWP_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HFC5891728.1"
                     /translation="MNNLPVADLLVFAIIAACIVLSAMRGVIAEAGSMAAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
BASE COUNT         3719 a         3433 c         3144 g         2720 t
ORIGIN      
        1 acggaaacct gcaccgcgtc attcccacga acccacatcc cgtcattacc acgaaagcgg
       61 gaatctagga cgcagggtta agaaaaccta catcccgtca ttccctcaaa aacagaaaac
      121 caaaatcaga aacctaaaat cccgtcattc ccgcaaaagc gggaatccaa aaacaaaaag
      181 ccgcagaaat ttaacggaag aaccgaaccc cgaaaatcgg cttcccgcct tcgcttgaat
      241 aacagaacaa aggaagcgga aataaaaaca tcgggattct ttttttaaat tggcaataaa
      301 acaccaaaat taatgattca cacaacaaaa aatagtcaac accgccaaac cggcgtaaaa
      361 tacaaaacat tatcaccctt aaaacggtaa aaccttatga aaaccaaacg ttttaaaatt
      421 aacgccatat ccttatccat ctttcttgcc tatgccctta cgccatactc agaagcggca
      481 ttggtcagag acgatgtcga ttatcaaata ttccgtgact ttgcagaaaa caaaggcaaa
      541 ttttttgtcg gcgcaaccga tttatcagtg aaaaacaaac aaggtcaaaa catcggcaac
      601 gcattatcca acgtaccgat gattgatttt agcgttgcag atgtcaacag acgtacatta
      661 accgtcatcg atccccagta tgccgtcagc gtcaaacatg taaaaggaga cgaaatctct
      721 tattacgggc atcacaatgg gcacttagat gttagcaatg atgaaaacga atatcgttca
      781 gttgcacaaa atgactacga accaaataaa aattggcatc acggtaatca aggtcgtctt
      841 gaagactaca acatggcacg ccttaataaa ttcgtaacag aagtcgcacc tattgcacca
      901 accagtgcag gcggcggcgt tgaaacctat aaagataaaa accgtttttc tgagtttgtg
      961 cgagttggag caggtacgca atttgaatat aacagccgct acaatatgac agagctttca
     1021 cgagcttatc gttatgccat tgcaggtacg ccttatcaag acgtgaatgt cacatcgaat
     1081 ctaaatcaag aaggcttgat tggcttcggt gataattcaa aacatcattc cccagaaaaa
     1141 ctcaaagaag ttttatctca aaacgcattg actaactatg ctgtgttagg cgatagcggt
     1201 tcaccattat ttgcttatga taaacaagaa aaacgctggg tctttttagg tgcttacgat
     1261 tattgggcag gctatcaaaa aaactcttgg caagaatgga atatctataa aaaagaattt
     1321 gcagataaaa tcaaacaacg cgataacgcc ggcaccatca aaggtaatgg agaacatcat
     1381 tggaacatta cttttggcac aaacagcaag attggttcta cagcggtaag gcttgccggc
     1441 aatgaaaagg atgcaaacaa cggacagaat gttacctttg aagacaacgg cactttggta
     1501 ttggatcaaa acatcaacca aggcgcgggc ggtctgtttt tcaaaggcga ttacacagtc
     1561 aaaggtataa ataatgacat cacttggcta ggtgcgggga ttgatgttac cgacggcaaa
     1621 aaagtcgttt ggcaagtcaa aaatccgaat ggcgacagat tggcaaaaat cggcaaaggc
     1681 acattagaaa taaacggcac aggcgttaac caagggcaat taaaagtcgg cgacggtacg
     1741 gttattctga atcaacaagc cgatgccgac aaaaaagtcc aggctttctc ccaagtcggc
     1801 attgtcagcg gacgcggtac attggtatta aatagttcaa atcagattaa tcccgataac
     1861 ctatatttcg gtttccgtgg cggtcgtttg gatgccaatg gcaatgactt gacttttgaa
     1921 cacatccgca acgtggatga aggcgcgcgc attgtcaacc acaacacaag ccacgcctcc
     1981 acaatcacgc taacgggtaa atctttaatt accaatccga acagcctttc ggtacatagc
     2041 atacaaaatg actatgacga agatgattat agttattact accgaccaag gcgcccgatt
     2101 ccgcaaggca aagaccttta ttacaaaaac tatcgttatt acgccctaaa atccggcggc
     2161 agcgtgaacg caccgatgcc cgagaacggt gtaacagaaa ataacgactg ggtctttatg
     2221 ggatatacgc aagaagaagc caagaaaaac gcgatgaacc acaaaaacaa tcagcgtatt
     2281 agcggtttta gcggtttctt tggcgaagaa aacggaaaag gacataacgg tgcattaaac
     2341 cttaatttca acggcaaaag cgcgcaaaac cgtttcttgt taacaggcgg cactaattta
     2401 aacggaaaaa taagcgtaac tcaaggcaat gtcttgttat caggtcgtcc aacaccacac
     2461 gcaagagatt ttgtgaacaa atcttcagcc cgaaaagacg cacatttctc caaaaacaat
     2521 gaagtcgtat ttgaagacga ctggataaac cgcacattca aagccgcaga aattgcggtt
     2581 aatcaatccg catcattctc ttccggtaga aatgtatcca acattaccgc caacatcacc
     2641 gcgacagaca acgccaaagt aaatttgggt tacaaaaacg gcgatgaggt ttgcgtgcgc
     2701 tcggactata ccggttatgt tacctgcaac acaggcaact tatccgataa ggctttaaac
     2761 agctttggag cgacacagat taacggcaat gtgaatctga accagaatgc ggcattggtc
     2821 ttgggcaagg ctgcattatg ggggcaaatt caagggcaag gaaacagccg tgtcagccta
     2881 aaccaacata gcaaatggca tttgactggc gacagccaag tacacaatct gtcattggcg
     2941 gatagccata ttcatttgaa caatgcctcc gatgcgcaaa gtgcaaatca ataccacacg
     3001 ctcaaaatca atcatttatc cggtaacggg cattttcatt atctgacgca cttggcggaa
     3061 aatcttgggg ataaagtgct tgtgaaggaa tccgcatccg gtcattatca gctccatgtt
     3121 caagataaaa caggcgaacc caatcaggaa gggctgaatc tctttgatgc atcatccgta
     3181 caagaccgct cccgcctttc tgtttccttg gcgaataacc atgtagattt aggcgcattg
     3241 cgttatacaa tcaaaacaga aaacggtatt acccgattgt acaatcctta tgccgagaac
     3301 cgccgccgag tcaaaccggt cccgtctcct gccacaaaca cggcttctca agcacaaacg
     3361 gacagtgcac aaattgccaa gcctcaaaat atcgtcgtcg caccgcctag cccgcaggca
     3421 aatcaagccg aagaagcaaa acgccaacaa gcaaaagcgg agcaagtgaa gcgtcagcaa
     3481 gcagaagcag agcgtaaatc ggcagagtta gcaaaacaaa aagcagaagc cgaacgcgaa
     3541 gcaagagagc tggcgacccg ccaaaaagca gaacaagaac gcagcagcgc cgaacttgca
     3601 cgtcgacatg aaaaagaacg cgaagcggca gagttgtcgg caaaacaaaa agtcgaagcc
     3661 gaacgtgagg ctcaagcatt ggcggtacgc cgaaaagcag aagccgaaga ggcaaaacgc
     3721 caagctgcag agcttgcacg ccaacaagaa gaagcacgaa aagctgcaga gttggctgct
     3781 aagcaaaaag cggaaactga acgcaaagca gcagaaattg ccgagcaaaa agcggaagcc
     3841 gaacgtgaag ccgccgaact tgccaagcaa aaggcggaag aagaaggtcg ccaagcagca
     3901 caatctcaac ccaaacgtcg taaccgcagg gctataccac cggaactgtc atctgatgca
     3961 acaacccgag ctttgcctag gatagcgaga aattcaaatc ctgatgccag cgattatgaa
     4021 gaaatcccct tggatgcgtt ggaagatgaa gatgtatccg aatcggttga cacatcagac
     4081 aaacagcctc aagacaatac ggaacttcat gaaaaagttg agacagtgag tttgcaacca
     4141 agagccgcgc agccgcgagc tcaagccgcc gcgcagccgc aagcccaagc cgccgcgcag
     4201 ccgcaagccc aagccgtcgc gcaagccgat gcagtcagca ccaataccaa ctcggcttta
     4261 tctgacgcaa tggcaagcac gcaatctatc ttgttggata caggtgcttc attaacacgg
     4321 cacattgcac aaaaatcacg tgctgatgcc gaaaaaaaca gcgtttggat gtcgaacatc
     4381 ggttatggcc gtgattatgc ttccgcacaa tatcgccggt ttagttcgaa acgcacgcaa
     4441 acacaaatcg gcattgaccg cagcttgtcc gaaaatatgc agataggcgg cgtattgact
     4501 tactctgaca gtcagcatac ttttgatcag gcgagcggca aaaatacttt tgtgcaagcc
     4561 aacctttatg gtaagtatta tttaaatgat gcttggtatg tggccggcga tattggtgca
     4621 ggcagcttga gaagccggtt acaaacacag caaaaagcaa actttaaccg aacaagtatc
     4681 caaaccggcc ttactttggg caatacgctg aaaatcaatc aattcgagat tgtccccagt
     4741 gcgggaatcc gttacagccg cctgtcatct gcagattaca agttgggtaa cgacagtgtt
     4801 aaagtaagtt ctatgtcagt gaaaacactg acggccggac tggattttgc ttatcggttt
     4861 aaagtcggca accttaccgt aaaacccttg ttatctgcag cttactttgc caattatggc
     4921 aaaggcggcg tgaatgtggg cggtaattcc ttcgcctata aagcagataa tcaacagaaa
     4981 tattcagcag gtgccgcgtt actgtaccgt aatgttacat taaacgtaaa tggcagtatt
     5041 acaaaaggaa aacaattgga aaaacaaaaa tccggacaaa ttaaaataca gattcgtttc
     5101 taaaatacta aattcatagc aaaataaaat gccgtctgaa ctcaggcttc agacggcatt
     5161 tttatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacagatagt
     5221 acggcaaggc gaggcaacgc cgtactggtt tttgttaatc cactatatca gacggacgag
     5281 gttacagttt aatccctttg agcttcgcga cggtattgat gtctttgtcg ccacgaccgg
     5341 ataggttgac cagaatcact tggtctttgc ccattttcgg cgcgtttttc accgcccaag
     5401 caacggcgtg gctggattcg agcgcgggga tgatgccctc gaagcggcag agcaagtcaa
     5461 aggcttcgag tgcttcgtcg tctttggcaa cagtgtattc gacgcgcttg atgtcgtgca
     5521 gatggctgtg ttccgggccg atgccggggt aatccaagcc tgcggaaaca gagtgcgtac
     5581 ccaaaacctg accgttttcg tcctgcatca gatagctgcg gaaaccgtgc aatacgccaa
     5641 tcggtgcgcc cgaagtaatc ggcgcggcgt gatcgggggt gttcacgccc aaaccgccag
     5701 cctccacgcc gacgaggcgc acgttttctt cgccgatata cgggtggaac aaaccgatgg
     5761 cgttcgatcc gccgcccacg caggcaacgg caacgtcggg ctgtctgccg atggcttcct
     5821 gcatctgcgc tttagcttcg ttgccaatca cgcattggaa atcgcgcacc atttcgggat
     5881 acggcgcggg gccggcggcg gtaccgatga tgtagaacgt gtcgtccacg cgggcgaccc
     5941 attcgcgcat ggcttcgttc atcgcgtctt tcagcgtgcg gctgccgctt tctacaccaa
     6001 ccacgttcgc acccaataat ttcatacgga acacgttggg catttggcgt tggatgtcgt
     6061 ccgcgcccat atacacgtcg caagtcatac cgaagcgtgc ggcaacggtg gcactcgcca
     6121 cgccgtgctg acccgcgccg gtttcggcga tgacgcgttt tttacccatg cgttttgcca
     6181 acagtgcctg accgatggtg ttgttgactt tgtgcgcgcc ggtgtggttc aagtcttcgc
     6241 gcttcaacca gatttgcgca ccgcccagat gttcggacaa ccgcgcggcg tggtaaacgg
     6301 ggctgggcct gccgacataa tgtttcaaat catggcggaa cgcttcccaa aattcaggat
     6361 cgtttttcgc tgccttatag gcatccgcca gctcttgcaa agccggaatc agggtctcgg
     6421 acacgaacag cccgccgtgt tcgccgaaaa agcccttctc gtcgggcgcg tggtagttct
     6481 tcatcagatt tcgtccttgt gcttcaaatt ttcagacggc aatttatagt ggattaacaa
     6541 aaaccggtac ggcgttgccc cgccttgccg tactatttgt actgtctgcg gcttcgccgc
     6601 cttgtcctga tttttgttaa tccactatat ttttcaaaca tgccgtccga acgggaaatt
     6661 gtcggcaatt ataactgttt ttcacacaaa cccgccattt cgaaaaacgc ccgatacgcc
     6721 gccgcctttt tcgccaaact caaaggatag gcacgcgaag tcgaaggcag gcgcgtcagc
     6781 gtcaaatccc gtccggcaaa cggaaacggc acggtttcgc ccgttttcgg cattttgatg
     6841 ccgccacctt gaatatcgag caggatttcc gtcgccttgc cgcctgtcgt acaaatatgg
     6901 cggcactcgg gtatttttgc caacaccgcc gccaaatcga cggtttcaac tacctttaaa
     6961 aacttgtcgg acgcattgcc gtgctgacgt accgccttca aaacggtcgg acaggacgca
     7021 atcccccgtt cgtgcaaaaa cgccttgatt ttctcggcat caaacgcttt ttcagagtgc
     7081 gcagcctccc cgttggacgg cactttgaaa taatccgcat cgccgaaaaa caccagcccg
     7141 taaacgcgcc acatatcgtt ttggaaattc ggataatgaa actgcatcgc gcgtttgtct
     7201 tccttgggcg gaaacgtccc catcatcatg accgcagcct tcggcggcaa cacggaatcg
     7261 aagggatggg tttcgatttc aagcagattt tcagacacgt tcaatcctcc aacaggcaaa
     7321 acggcagaca gccggttttt gcaccaaacc gccaaacacg gcaagccttc aaacagcatt
     7381 atcacgccct gccgttttcg gttacaatgc cgacatcaaa cggatactgt aaacacattt
     7441 atgtttcaac acacaggacg acacataaag caccgcccta tgtgccatcc tgatttggaa
     7501 ggggttacgc ccctcccaaa tagagtctga ttctaccgcc ctaaagggcg gggtttcaac
     7561 cgaaaaggaa acacgatgaa agaacacaaa gcccgcaagc gtttcgggca gaattttttg
     7621 caggacacgc ggattatcag cgatattgtc aacgccgtgc gcccgcaggc ggatgatgtc
     7681 gtgattgaaa tcggtccggg tttggcggcg attaccgaac ctttggcgaa aaagctgaac
     7741 cgcctgcacg ttgtcgaaat cgaccgcgac atcgtatgcc gtctgaaaac gctgccgttt
     7801 gcggataaac tggtgattca cgaaggcgat gtattgcagt ttgatttcaa cggcatcgca
     7861 ggcaaaaaga aaatcgtcgg caacctcccg tacaacattt ccacaccgct tttgttcaag
     7921 ctggcggagg tggcggacga tgtcgtcgat atgcacttta tgctgcaaaa agaagtggtc
     7981 gagcgtatgg ttgccgcgcc gaaaagcaac gactacggcc gcttgggcgt gatgctgcaa
     8041 tattttttcg atatggaaat gctgattgac gtaccgcccg aatcgttcga ccctgcgccg
     8101 aaagtggatt ccgccgtcgt ccgtatgatt ccggtgaaac accgcatcgg caaggcggac
     8161 gatttcgagc atttcgccaa actggtgaaa ctcgccttcc accaacgccg caaaaccata
     8221 cgcaacaacc tgaaagagct tgcaggcgac gatgatttgc aggctgtcgg catcaatccg
     8281 caagaccgtg ccgaacacat cgcgccggaa aaatacgtag cgttgagcaa ttatctggcg
     8341 ggcaaggccg tctgaaaagg gagtaagccg atgaagaaat acctgctttt acccctgata
     8401 ctgccgcttg cagcctgcct gaccaatccg aacgaccgtt tttttgacgg cagacgctac
     8461 acgcttcatc atatggagct cccgtaacga caacctgcaa cggcaaatgc cgtctgaaag
     8521 aaaagacatg atcaaattca aaaacgtaca caaacatttc aaagacctgc acgtcatcaa
     8581 cggcgtgaac ttggaaatca aaaaaggcga agtggtcgtc gtctgcgggc cttcgggcag
     8641 cggcaaatcc acactcatcc gcaccgtcaa ccagcttgaa agcatcgaaa gcggcgagat
     8701 ttgggtggac ggtgtcaacg ttgccgaccc aaaaaccgat ttgaacaaaa tccgcgaaga
     8761 agtcggcttt gtgtttcaaa gtttcaacct ctacccgcac ctgaccgtgt tggaaaacat
     8821 taccctcgca ccgatgaagg ttaaggggca aaatgcggaa caggcggaga aaaaggcaat
     8881 ggagcttttg gaacgcgtcg gactggcaca caaaaaagac gccttccctt cccaactttc
     8941 cggcggccag cagcaacgcg tggcgattgc acgcggtttg gcgatggaac cgcgcgtaat
     9001 gttgtttgac gaaccgacct ccgcactcga ccccgaaatg gtcggcgaag tgttgaaagt
     9061 gatgaaagac ttggcagaaa gcggcatgac catgatgtgc gtaacccacg aaatggggtt
     9121 tgcccgcgaa gttgccgacc gcgtgatttt cgtcgataaa gggcaaatcc tcgaagacga
     9181 aacgccggaa gcgtttttta ccaacccgaa acacgaacgc gccaagcagt tcctgcaaca
     9241 ggtcatgacc cattgatgct atgccgtctg aaaaccgaac gttcagacag catatcccga
     9301 caccgcaaga tgattgagaa agaaaaccat gtattttgtt gaccgcaccg ccgtcgtcct
     9361 caagccgacc gcgcgctttt tggaatggct caaaagcacc gacgaaaata tgcccgacct
     9421 gaccatagag cagcttcgtg ccaactgttc cgtcttcctc gttccgcagt tcgacgaacc
     9481 ggaagccgtc gtttcctact tcgacgaacg ctaccgccag attttcgagg cggagctggc
     9541 aggttgggac atcaataagg ataaatggcc gcaagatatg gggctgaagg cgttttggga
     9601 atttttcgac atcgaaatcc acgatatggt gttggacatg gaagaagcgg aattgaacat
     9661 tacccccgtg ttcgacaaca tgatgtaagg ctgtgcgcgc ctttcagacg gcattgaggc
     9721 cgtcccgcat cctgaacatc ctgaccgtat cgctccactc ggcttccctt gccgtctgcc
     9781 tgacctggtt ttacggccgg atgatgtggt tcggtttggc ggctttggtg gcaagttacg
     9841 catactcgct caggataacg aatctgaaac accgccatgc cataaccgcc attaccatag
     9901 accgcgacgg acaggcggaa atcgtatccg gcaaagacaa aacagcggca acacttgcgg
     9961 gcagcagtat ggttacgcct tatgccttat tcttacaatg ggacaccggc ggcaaaaccg
    10021 tcagccaatg catcataccc gacatgacgg acaaagaatc ctaccggcgg ctgaaagtct
    10081 gggtgctttg gcggcagccg aaaaaaaccg ccgaaaccga tacaccaagc tgatttcaga
    10141 cggcatttga acacggaaca ctcaatgaaa acactgcaag actggctctc ccatttggaa
    10201 accgcccaca gcggtggctt gatcgatatg ggcttggaac gcgtaggcga agtgaaaaaa
    10261 cggatgaagc tcacgccgca atgccccgtc gtcgttgtcg cgggaacaaa cggcaaaggt
    10321 tcggtctgcg cctacctgac acagatttac aaacaggcag gctttaaagt cggtacgctg
    10381 accagcccgc atttattgcg ttacaacgaa cgcatcgccg tcaacgccga acccgtttcg
    10441 gacgatacga ttattgcctc tttcgagcgc atcgaagcgg cgcgcggcga aatatcgctg
    10501 acttattttg aattcaatgc cttggcggcc gtcgacatct tcatgcgcga acaggttgac
    10561 gtgatgatat tggaagtcgg cttgggcgga cgcttggacg cggtcaacgc atttgacggc
    10621 gattgcgcgg tggttaccag cgtggatttg gaccatcagg cgtttttggg cgatacggtc
    10681 gagcaggtcg gctttgaaaa agcaggcgtg ttccgcagcg gcaaacccgc catctgcggt
    10741 caaaaccccg cgcccgcatc attggtcgca cacgccgaag ccataggcgc gaaactgctg
    10801 atggtgcagc gcgatttcga gtttcacgcg ctggaaaaca tccaatggaa ctaccgcttc
    10861 catccgcaac attcagacga ccccacgcgc aaccgcaatg ccctgccctt ccccgcattg
    10921 cgtggcgcat accagctttc caacgccgcc tgcacgttga ccgtattgga atgcttgaac
    10981 gacaaattgc ctgtggacat cggcgccatc aaacgcggat tgctgctggt tgaaaatccc
    11041 ggccgcttcc aagtcctgcc cggccgtccg ctgaccgttt tggatgtcgg acacaatccc
    11101 cacgctgccc gcgccctgcg ccgcagcctg attaatttgg cgtttgcgca aaaacgcacc
    11161 gccgtattca gtatgctgtc cgacaaagac atagacggcg tgttggaaat cgttaaagac
    11221 cagtttgacg agtggtatat cgcaccgttg gatgtaccgc gcggcatgac gctcgagagc
    11281 ctgcaaaaca aactgcacga acacggcatc gaaaacatac agacattcgc cgccgtccgc
    11341 gaagcatacc gggcggcagc ctcaaaagcg ggcgagaacg acagaatcgt cgttttcggc
    11401 tcatttcata ccgttgccga tgtcatgtcg gtactttaaa aggaaacttc tatgtccgaa
    11461 aacaaacaaa acgaagtcct gagcggttac gaacaactca aacggcgcaa ccgccgccgc
    11521 ctcgtaacgg caagttgcct ggttgccgcc tcctgcatcc tgctggcagc cgccctcagt
    11581 tccggccctg ccgaacagac tgccggcgaa acaaacggcg tagaaaacaa agcggcaggt
    11641 gcggcacaaa cccctgcctt gaaatccgcc gccgacaaac cgcaggactt ggcaggcgaa
    11701 gacaagcctt ctgccgccga cagcgaaatc agcgagcctg aaaacgtagg cgcgccgctg
    11761 gtgctgatta acgaccgcct cgaagacagc aacatcaaag gtttggaagc atccgagaaa
    11821 ctgcaacagg cagaaaccgc caaaaccgca ccgaagcagg caaaacaacg cgctgccgaa
    11881 aaagtgccgg caactgccga cagtacggat acggtagcgg ttgaaaaacc gaaacgcact
    11941 gccgaaacaa aaccgcaaaa agcggaacgc actgccaaag ccaagcccaa agccaaagaa
    12001 accaaaaccg ccgaaaaagt tgccgacaaa ccgaaaactg ccgccgaaaa aaccaaaccg
    12061 gatacggcaa aatccgacag cgcggtaaaa gaaacgaaaa aagccgacaa ggctgaaagc
    12121 aaaaaaacag ccgaaaaaga ccgttcggac ggcaaaaaac acgaaacggc acaaaaaacc
    12181 gacaaagcgg acaagaccaa aaccgccgag aaggaaaaat ccggtaaaaa agccgccatt
    12241 caggcaggtt atgccgaaaa agaacgcgcc ttaagcctcc agcgcaaaat gaaagcggcg
    12301 ggtatcgatt cgaccatcac cgaaattatg accgacaacg gcaaagttta ccgcgtcaaa
    12361 tcaagcaact ataaaaacgc aagggatgcc gaacgcgatt tgaacaaatt gcgcgtacac
    12421 ggtatcgccg gtcaggtaac gaatgaataa cctccccgtt gccgacctcc tcgtcttcgc
    12481 catcatcgcc gcctgcatcg tgctatccgc gatgcgcggc gtgattgcgg aggcaggttc
    12541 gatggcggca tgggtggttt ccttcttttt tgccaaactc tttgccgcac ccttcgccga
    12601 cctcgccttt gcctcgttcc aaccccgcct gtttgcattg gctctgtcgt tcatttccct
    12661 gttcgtcatt gcctgtctga tccagaaaat gctccgttcg ctgctgaccg gcgcagtttc
    12721 ggcggtcggt ttgggctttg ccaaccgcat tttgggcggc gtattcggtg cattgaaagg
    12781 cattttgatt attaccctgc tggtcatgct cgcttcaaaa accgacctgc ccgataccga
    12841 agaatggcgg caatcttaca cactgccgtt tttcgtatcg ctttccgaag ccgtgttgaa
    12901 ccatagcggc ggcacggcgg aaactccgga agacgattga ttgccctgct ggcgtttcag
    12961 acggcattct cttttatgcc gtctgaaatg ttttttcctt tcctcagcca tatcac
//
LOCUS       DAXHKG010000053        12866 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.053, whole genome shotgun sequence.
ACCESSION   DAXHKG010000053 DAXHKG010000000
VERSION     DAXHKG010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12866
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.053"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(142..939)
                     /locus_tag="ACFMWP_001118"
     CDS             complement(142..939)
                     /locus_tag="ACFMWP_001118"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HFC5891729.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            1094..3940
                     /gene="uvrA"
                     /locus_tag="ACFMWP_001119"
     CDS             1094..3940
                     /gene="uvrA"
                     /locus_tag="ACFMWP_001119"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HFC5891730.1"
                     /translation="MCNHHPQHSHDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMESGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAQCENSVTGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGIPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADYIVDLGP
                     EGGDGGGRIIASGSPEEVAKVKGSYTGKYLKVVL"
     gene            3955..4869
                     /locus_tag="ACFMWP_001120"
     CDS             3955..4869
                     /locus_tag="ACFMWP_001120"
                     /inference="COORDINATES: protein motif:HMM:NF016724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFC5891731.1"
                     /translation="MSSNYFFSAIDESLITSNNSLSMFLNNLKNYSLDQKNHIFVIQA
                     PLANNKYIYTYKDVVIVLIAKKKIAFINFGDTDSFETFREDFIEDLNAISDKYEYKSK
                     IGRPRDWKTIFKNFSLDELVSNDIQNFVKNIEISSEREQRLSELIISLLTGSINDIEK
                     IDGLNIQDNILDKIKKKIILFDSNQTNFLYQNKNQKKIIIQGLSGTGKTELLLHKLKE
                     LYLESDNNRIFFTCNNKILAESLRNRIPRFFNFMQVSQQIDWDNRLWCNHAWGSGKNK
                     NSGLYSFICHFYGIPFLNYAQESSFSKI"
     gene            4873..6009
                     /locus_tag="ACFMWP_001121"
     CDS             4873..6009
                     /locus_tag="ACFMWP_001121"
                     /inference="COORDINATES: protein motif:HMM:NF024928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding domain-containing protein"
                     /protein_id="HFC5891732.1"
                     /translation="MAIEQIKSNSDNLNKYAFDYILIDESQDFGESFFELCSLVTKHK
                     IYIAGDIFQSIFGEQKIYDHVDYLLNQCYRTDPKTLMFSHGLSMGLFESEKLQWLTDQ
                     QWEQYGYIFQKNNNRYIFTREPIRRFEDLKDNDNSIHIENIKELNNSQISDKIVELIM
                     DIKSKYPSVQPDDIAIIFLEQNRRYNSEMLNYIRYTLEEKGIDWPINPAFESKQQLTG
                     YLSITNFNHVKGLEFPFVICISPYEVTADLRKRNAIYMAMTRSFLHSSLLMPVSTDNF
                     FLYSRGLNEINSTKRMTIEEPNEENKNRIREINIQFDGSHSFKDIVIEILDSFPKSSS
                     ITDKDREWCIQGVLRSLGETYDKNAIKSHLKPLIDYIQGERNES"
     gene            5999..6667
                     /locus_tag="ACFMWP_001122"
     CDS             5999..6667
                     /locus_tag="ACFMWP_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891733.1"
                     /translation="MKADFFILDGNHLSRFKYIFQEAIRDKILVLRILFESIDYILHL
                     PKSDRYLNDYNKIGDYTIILSINKHSRIIFYSNQKIFSIVLPFTYFNDKKTYEFYFNS
                     ILINSGIVSYIKEFLDMLSKNGNTLVLDEIMEFYTNNPEKDSDKDNAIIILSDLILLE
                     DGYIRYDYDPEHENGNLHPLHHYDIFYQNKNTFKIGLKSAIGCKEFIELLDCTEERSF
                     LSKL"
     gene            complement(6781..6966)
                     /locus_tag="ACFMWP_001123"
     CDS             complement(6781..6966)
                     /locus_tag="ACFMWP_001123"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891734.1"
                     /translation="MFDKQARFWIGEFDGEKECAAGNEVSAITRHRIFVFGLNVGEGT
                     VCCLGFNFVEVEVFRRH"
     gene            6989..7318
                     /locus_tag="ACFMWP_001124"
     CDS             6989..7318
                     /locus_tag="ACFMWP_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5891735.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRQHERGIWQRRFYGHTVRDETDLQRCADYIHSNPIKQKMSRA
                     KTESCKK"
     gene            complement(7553..8443)
                     /gene="sucD"
                     /locus_tag="ACFMWP_001125"
     CDS             complement(7553..8443)
                     /gene="sucD"
                     /locus_tag="ACFMWP_001125"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HFC5891736.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPDECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKTKGLA"
     gene            complement(8454..9668)
                     /gene="sucC"
                     /locus_tag="ACFMWP_001126"
     CDS             complement(8454..9668)
                     /gene="sucC"
                     /locus_tag="ACFMWP_001126"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HFC5891737.1"
                     /translation="MWRQTRGHSTNLKEKSMNLHEYQAKELLAGYGLPVQGGILAHNG
                     EEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQT
                     DANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRITFMASTEGGVEIEKVAAETPEK
                     IFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPL
                     AVRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNI
                     GCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLIN
                     IFGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLN
                     DAAEKIVAAVNA"
     gene            complement(9720..10007)
                     /locus_tag="ACFMWP_001127"
     CDS             complement(9720..10007)
                     /locus_tag="ACFMWP_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891738.1"
                     /translation="MNKEIVGIFFIPAGIISMCMAVLWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            complement(10132..11565)
                     /gene="lpdA"
                     /locus_tag="ACFMWP_001128"
     CDS             complement(10132..11565)
                     /gene="lpdA"
                     /locus_tag="ACFMWP_001128"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC5891739.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            11762..11878
                     /locus_tag="ACFMWP_001129"
                     /pseudo
     CDS             11762..11878
                     /locus_tag="ACFMWP_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11930..>12866)
                     /gene="odhB"
                     /locus_tag="ACFMWP_001130"
     CDS             complement(11930..>12866)
                     /gene="odhB"
                     /locus_tag="ACFMWP_001130"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HFC5891740.1"
                     /translation="AAEAPAAAPAEAAPAAAPAAAQNNAAMPAAAKLAAESGVDVNAL
                     QGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAGARPEERVPMSRLRARVAERLLASQ
                     QENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGVKLGFMSFFVKAAVAALKKYPVVNA
                     SVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIADIEQAIVDYAKKAKDGKIA
                     IEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHATKERAVVENGQVVVRPMMYL
                     ALSYDHRIIDGREAVLTLVAIKDALEDPARLLLDL"
BASE COUNT         3487 a         3134 c         2894 g         3351 t
ORIGIN      
        1 tgataaatca ccgtaacgtt aaatttccag attcccattt tcgtgaacat aacggtgtga
       61 acattagcaa aaattcaaaa aaccaaactt cctcattcgt gtgaatgatg gtactgatat
      121 tttctatttc agttcgcaaa attaatcttt caacacatct tgcacagccg cctgaatctt
      181 agccgccgct gcctcgattt gccgttgttc ggcagatggg tttgccgctg tttcaaccgg
      241 agcagtttgt aaagcaggct cagactcagg ctcggattcg atttgcggcg cagtcagcgg
      301 caaacgcgcc aatacagtgc taacgccagt tactttatcg ccaatcgcca cttgcgcctg
      361 cgcatcgaca ggcagataca tatccacgcg cgaaccgaag cggataaagc cataacgttc
      421 gccgcgggac agtttcgcac ctgcttgggt gtagcacaaa atacggcgcg ccaccaaacc
      481 ggccacttga acaaaagtaa tttcacgacc ggaagccgta gtcgccaaca ccgcattacg
      541 ttcgttttcc gtgctggctt tgtccaaatc cgcattcacg aatttgcctt tgttatagac
      601 cactttcgtt accgtacaat cggcaggcga tttttgcgaa tgcacgttga acacgttcat
      661 aaaaatactg attttcaaag catcgacatc acgatacgga tcgcgtgcgc gctcgaccac
      721 cacgatacgg ccgtcaaccg gactcaacac tgcttcagga ttttgcggaa tctcacgcgc
      781 agggtcgcgg aaaaactgca gggcaaatac ggtaaacacc caaaacggca aagaccacca
      841 gccgcaacac atcgacacca gcaggctcaa agccaaaccg ccgccaataa tcggccagcc
      901 ctcacgggcg ataatcgggt gggggtaaag acggttcatt tgtcatcctt ttgttcaagc
      961 gggttaaaat tgccgacatt atagcggaat ctgccgtact ccgccgacaa atgccgtctg
     1021 aatcctgctt aagacgttat ttgataaagt gctacaatat cggttttcct ttatttttca
     1081 ggcggcatcc attatgtgca accatcatcc ccaacattcg cacgacaacg acaccatccg
     1141 catacgcggc gcgcgcacgc ataatttgaa aaacgtcgat ttagacattc cgcgccacaa
     1201 gctggtggtg gtaacaggat tgtcaggcag cggcaaatca tcgctggcgt tcgacacgct
     1261 gtatgccgaa ggacagcggc gttatgtcga gagcctgtcc gcctatgcgc ggcagttttt
     1321 gcagatgatg gacaaacccg atgtcgattt gatcgaaggc ctgtcgcccg cgatttccat
     1381 cgagcagaaa tccaccagcc acaatccgcg ttccaccgtc ggcacggtta cggaaatcca
     1441 cgactatctg cgccttttgt acgcacgcgt cggcacaccc tactgccccg aacacaagct
     1501 gccgctatcc agccaaaccg tatctcaaat ggttgatgcc gtcttaaaac tgccggaaga
     1561 cacgcgcgtg atgattctgg cgccggcggt acgagagcgt aagggcgagt ttgtcgactt
     1621 ctttgccgac ttgcaggcgc aaggctttgc ccgtgtgcgc gtggacggcg aagtttatca
     1681 gcttgacgaa gtgccgaagc tggagaaaaa catcaagcac aatatcgacg tggtcatcga
     1741 ccgcgtgaaa gtgaaggcgg acatcaagca gcggctggcg gaaagttttg aaaccgcact
     1801 gcgccacggc aacgagcgcg cgctggcgat ggaaatggaa agcggcgaag aacattggtt
     1861 ttccgcgcgt ttcgcctgtc ccgtatgttc atacagcctg cccgaattag agccgcgcct
     1921 gttttcgttc aacaacccga tgggctcctg cccaacttgc gacggcttgg gcaacaccaa
     1981 cttcttcgat cccgaaaaag tggtcgcgca tcccgaattg tcgctggcaa cgggcgcgat
     2041 tgacggctgg gataagcgca accagttcta tttccaaatg attcagtcgc tggcgcggca
     2101 ttacggtttc gatgtgcagg ctgcttggga aacgctgcct gaaaaagtca aaaaagtcgt
     2161 gctgcacggc tcgggcaagg aagtcattga tttcacctac ctatccgaac gcggcaccac
     2221 cttcaaccgc agccacgcct tcgaaggcat cattcccaat ctcgaacgcc gctaccgcga
     2281 aaccgacagc gaaaccgtgc gcgaaaaatt gcgcgaatac cagaaccacc gcgcctgccc
     2341 gagctgcggt ggtgcacgtt tgcgcaaaga agcccgctac gtttacgtca gcggcgaacc
     2401 gctgcacgaa gtttccgcct ggccgctcac caaaacccac caattctttg aaacactgga
     2461 tttagacggc aacaaaaaac aaatcgccga aaaaatcctc aaagaaatca ccgaacgcct
     2521 cggcttcctg attaacgtcg ggctggatta cctgaattta agccgctccg ccgaaaccct
     2581 ctccggcggc gaagcccagc gcatccgcct cgccagccaa atcggcagcg gcctgaccgg
     2641 cgtgatgtat gtactggacg aaccctccat cggcctgcac cagcgtgaca atgaccgcct
     2701 gctggccacc ctcaaacgac tgcgcgattt gggcaacagc gtgattgtgg tcgaacacga
     2761 cgaagacgcc atccgcgaag ccgatttcgt ggtcgatatg ggccccggcg caggcgaaca
     2821 cggcggcaac gtactgattg ccgacacgcc cgaaaacgtc gcccaatgcg aaaactccgt
     2881 taccggacaa tacctcagcg gcaaaaaatc cattgccgtg ccgtctgaac gcacgcccgt
     2941 caatcccgac cggatgctcg tcctcaaagg cgcacgcggc aacaatctca aaaacgttac
     3001 ccttgagctg ccgctcggtt tgattacctg catcaccggc gtatccggca gcggcaaatc
     3061 caccctgatt aacgacaccc tcgccaaaat taccgcccgc gaactcaacc gcgcccaaga
     3121 agaacccgcc ccatacgacg acatccgcgg cctcgaacac ctcgacaaag tcatcaacgt
     3181 cgaccaatcc cccatcggcc gcaccccgcg ctccaacccc gccacctaca ccggcctgtt
     3241 cacccccatc cgcgaactct tcgccggcat ccccctctcg cgcgaacgcg gctacaacgt
     3301 cggccgcttt tccttcaacg tcaaaggcgg ccgctgcgaa gcctgccaag gcgacggcgt
     3361 gattaaagtc gaaatgcact tcctgcccga cgtgtacgtc ccctgcgaag tctgccacgg
     3421 caaacgctac aaccgcgaaa ccctcgaaat ccaatacaaa ggcaaaaaca tcagccaagt
     3481 cctcgacatg accgtcgaag aagcccgcga atttttcgat gccgtcccca ccgtatcgcg
     3541 caaactgcaa accctgatgg acgtaggcct aggctacatc cgcctcggtc agtccgccac
     3601 caccctctcc ggcggcgaag cccagcgcgt caaactcgcc ttggaactct ccaaacgcga
     3661 caccggcaga acgctctaca tcctcgacga acccaccacc ggcctacact tcgccgacat
     3721 cgccctgctg ctggaagtga taggccgtct gaaaggcaaa ggcaactcaa ttgtgattat
     3781 cgagcataat cttgacgtta taaaaacggc tgattatatt gtggatttgg ggccggaagg
     3841 cggcgacggt gggggaagga ttattgcttc aggtagccct gaggaagtgg cgaaggttaa
     3901 ggggagttat actgggaagt atttgaaagt ggttttgtaa ttaggagatt taaaatgagt
     3961 tcaaattatt tttttagtgc tattgatgaa agtttaatta catcgaataa ttcattatca
     4021 atgtttctta ataatttgaa gaattattca ttagatcaga aaaatcatat atttgtgatt
     4081 caagctcctc ttgcaaataa caaatatata tatacatata aagatgtagt tattgtatta
     4141 attgcaaaga aaaaaatagc cttcattaat tttggagata cagattcttt tgaaacattt
     4201 agagaggatt ttattgaaga tttaaatgct atctctgata aatatgaata taaaagtaaa
     4261 attggtagac ctagagattg gaaaaccata tttaaaaatt tctccctaga tgaattagtt
     4321 agcaatgata tacaaaattt tgttaaaaat attgaaattt cttccgagag agagcagcga
     4381 ttgagtgagt tgatcatttc tcttcttact ggaagtatta atgatattga aaaaatcgat
     4441 ggtctaaata ttcaagataa tattcttgat aaaattaaaa agaaaattat tctttttgac
     4501 tctaatcaaa caaatttttt gtaccaaaat aaaaatcaga aaaaaattat tattcaaggc
     4561 ttatcaggca cagggaaaac agaactatta ctacataaat taaaagaatt gtatttagag
     4621 tcggataaca atagaatatt ttttacatgc aacaataaaa tattagcaga aagtttaaga
     4681 aacagaatcc caagattttt taactttatg caagtatcac aacaaatcga ctgggataat
     4741 cgattatggt gtaaccatgc gtgggggtca ggcaagaata aaaattctgg actatatagt
     4801 tttatttgcc atttttatgg tattccattt ctgaactatg cccaagagtc atcattctct
     4861 aaaatttgat ccatggcaat tgaacaaatc aaatcaaatt cagataatct taacaaatat
     4921 gcattcgatt atatattaat tgatgagagc caagattttg gtgagagttt ctttgaatta
     4981 tgcagcttag tgactaaaca taagatctat attgcaggag atatattcca atctattttt
     5041 ggagagcaaa aaatttatga tcatgtagac tacttattga atcaatgtta tagaacggat
     5101 cctaaaactt taatgttttc tcatggcttg agtatggggc tatttgaaag tgagaaatta
     5161 caatggctaa cagatcaaca atgggaacag tacggataca ttttccaaaa aaataataat
     5221 agatatatat ttacaagaga accaattcga cgatttgaag acttaaaaga caatgataat
     5281 agcattcata tagaaaatat taaggaactt aataattccc aaatttcaga taaaattgtt
     5341 gaattaatta tggatattaa gtctaaatac ccaagcgttc agcctgatga catagccata
     5401 attttcttag agcaaaatcg tagatacaat agtgagatgc ttaattatat tagatataca
     5461 ttagaagaaa aagggataga ttggcctata aatccagcct ttgagtctaa acaacaatta
     5521 actggatatt tatcaatcac aaattttaat catgtgaaag gattagaatt tccttttgta
     5581 atctgtatct caccatatga agttacagcc gacttacgga aaagaaacgc tatttacatg
     5641 gcaatgacta gatcattttt acatagtagc cttttaatgc ctgttagcac tgataacttc
     5701 tttttatact ctcgaggact caatgaaatt aattctacta aaagaatgac tattgaagaa
     5761 ccaaatgaag aaaataagaa ccgaattcga gaaattaata tccaatttga tggtagtcat
     5821 tcatttaagg atattgttat agaaattctg gattcatttc ctaaatcgtc atctattaca
     5881 gataaagata gagaatggtg cattcaagga gttttacgtt cattaggaga aacctatgat
     5941 aagaatgcaa ttaaatcaca tctaaaacct ctgattgatt atatccaggg tgagagaaat
     6001 gaaagctgat ttttttatat tagatggtaa tcatttatca agatttaaat atatttttca
     6061 ggaggcaatc agagataaaa ttttagtctt aagaatttta tttgaatcaa tagattatat
     6121 tttacatctt ccgaaaagtg atagatatct gaacgattat aataaaattg gagactatac
     6181 aattatatta tctattaata agcattcacg tattattttt tattccaatc aaaaaatttt
     6241 ttcaatagtt ctaccattta cttattttaa tgataaaaaa acatatgaat tttattttaa
     6301 tagcattctt attaattctg gtatcgtttc gtatattaaa gaatttttag atatgttatc
     6361 caaaaatgga aatacattag ttttagatga aataatggaa ttttatacaa ataatcctga
     6421 aaaagattct gataaggata atgctattat tatattaagc gatctaattt tattggagga
     6481 tgggtatatt cgatatgatt atgatcctga gcatgaaaat ggtaatttgc atcctctaca
     6541 tcattatgac attttttatc aaaacaaaaa tacttttaaa attggtttaa agtcagccat
     6601 cggatgcaag gaatttattg aattactgga ttgcaccgaa gaaagaagct ttcttagcaa
     6661 actgtagtct gcatactcaa cccacagcgt gcgtggctgc accacacacg cgggttgctt
     6721 gattgtcggt ttgccatttt caaatttgct ttcgttgaag ctagcgcttt cagacggcct
     6781 ctaatgtcgt ctgaaaacct caacttcaac aaagttaaac cctaaacaac aaaccgttcc
     6841 ttctccaacg ttcaaaccaa aaacaaaaat cctatggcgc gttatcgcag aaacttcatt
     6901 gccggcggca cattcttttt caccgtcaaa ctcgccgatc caaaatcgcg cctgcttgtc
     6961 gaacatatcg gcttcgcgtg cggcttatat ggatgtgcaa aaacaatatc cctttgaaac
     7021 cgtcgccgta tgcgtgctgc cgaaccatat tcacgccatt tggacgctgc cgcccgacga
     7081 tgcggattat tccctactcc ggcggctgat taaaaccaaa ttctccgcat attcccctta
     7141 tactaaaaac ttatccgccg gcaaacagcg gcagcacgaa cgcggtattt ggcaacggcg
     7201 tttttacgga cacaccgtgc gcgacgaaac ggatttgcag cgttgcgcgg actacatcca
     7261 ttccaatcct atcaaacaaa aaatgtcgcg tgctaaaaca gaatcctgca aaaaataata
     7321 tcagtctttt caaatgcgat agttatcatt ccccaacttc aaacaaggcg tgtgcaacct
     7381 gacttacggg tttgctcctg tttgaccgat aaatattctg cctgcctcaa agggcaaaaa
     7441 taatgtgggt atgttgaggc tgcctctttt tgaaatgaca aacaaaatgc cgtctgaaac
     7501 ccgatttccg gtttcagacg gcatttgatg ttcaatcagt tgtcaaacct gattatgcca
     7561 aaccttttgt tttcaacact tccagcatgg tagtgcccaa ctcggcaggg ctgcgggtgt
     7621 aagcgatacc ggctttttcg aaagcggcga atttttcctc ggcagtacct ttaccgccgg
     7681 aaataatcgc accggcgtgg cccatacgtt tgcctttagg agcggtaaca ccagcaatgt
     7741 aacctacaac aggtttggtt acgttggatt ggatgtattc ggctgcttct tcttccgcag
     7801 taccgccgat ttcaccgatc atgatgatgg cgtcggtatc cgggtcttct tggaagagtt
     7861 tcagtgcgtc gatttgattc ataccaggaa tcgggtcgcc gccgataccg atacaggttg
     7921 attgacccaa gcccagtttg gtggtttgtg ccacggcttc gtaagttaat gtaccggaac
     7981 gggaaataat accgatgcgg cccggagtgt ggatgtggcc cggcataata ccgattttgc
     8041 actcatccgg agtaatcacg cctgggcagt tagggccgac caagcgggta ccgttgccgt
     8101 tggtttccaa ataacgtttg gctttgagca tgtccagagt aggcacgcct tcggtaatca
     8161 caacgaccaa gcctacgcct gaatcaacgg cttcaacgat agaatccaac acaaacggag
     8221 cgggaacgta aattacagat gcatccgcgc cggtttcttt aaccgcttct ttcatggtgt
     8281 tgaatacagg caggttcagg tgggtttgac cgcctttgcc cggggtaacg ccgccgacaa
     8341 ctttagtgcc gtaagccaga gcttgttcgg agtggaaagt accgttttta ccggtgaaac
     8401 cttgaaccaa tactttggtg tctttattaa tcaatacgct cattcttttc tccttaggcg
     8461 tttacggctg cgacaatttt ttcggctgcg tcattcaggc cgtctgcaga agtcagtttc
     8521 agacctgatt cgttcaggat tttcgcgccg agttcggcgt tgttgccttc caaacgaaca
     8581 acgacaggaa cgtcgacgtt gatttcttta acggctgcca cgatggcttc cgcaatcatg
     8641 tcgcaacgta cgataccgcc gaagatgttg atcaatacgc cttgaacgga tttgtcttcc
     8701 agaatcagtt tgaacgcttc aaccacgcgg tctttggttg cgccgccgcc aacgtccaag
     8761 aagttggcag gttggccgcc tttcagtttg atgatgtcca tagtggccat cgccaaaccg
     8821 gcaccgttca ccatacagcc gatgttgcct tccagggcaa catagttcag gtcaaattca
     8881 gaagctttca actcgcgttc gttttcttga gatttgtcgc gcaattcggc gattttcggc
     8941 aggcggtaga gcgcgttgct gtcgatgccg attttgccgt ccacgcaggc gagcgcgccg
     9001 ttttcgcgaa ctgccagcgg gttgacttca aacagggcga agtcattttc gacaaacgct
     9061 ttgtacgcac cggtcatcag tttgacgaac tcgttgattt gtttgtcttt caagcccagt
     9121 tggaacgcaa cttcgcgagc ttggcaaggt tgcaggccga ccagcggatc aacggttact
     9181 ttgaagattt tttcaggagt ttcggcagca actttttcga tttccacgcc gccttcggta
     9241 gaggccatga atgtaatgcg gcgggtagaa cggtcaacca ctgcgcccaa gtacagctcg
     9301 gtttgaaccg gatacatgtc ttcgcaaacc aaaacgctgt tgacaggttg gccgttggca
     9361 tcagtttggt aagttaccaa gttggtgcca atcaggcttt cagccacttc tttagcttct
     9421 tcgcggcttt taacgacttt tacgccgccc gctttaccgc ggccgccggc gtgtacttgt
     9481 gctttgacaa cagcgaattt gccgcccaat ttgtcgtaag ctgcagcggc ttcttcgccg
     9541 ttgtgtgcca aaataccgcc ttgtacgggc aaaccgtagc cagccagcag ttctttagcc
     9601 tgatactcgt gtaaattcat ggatttctcc tttagattag tggaatgccc ccgagtttgc
     9661 ctccaaatgg caagcccgtg cgtttcagac tacctttcgg cggtcggaaa atcgtcgttt
     9721 cacttgctga aaggcaacca catccgcgcc agcagataca tggctgcacc gcctcccccg
     9781 agaataaaaa agacgatgcc ttttttacgc gaattcgggc agagcagata aacggcaagg
     9841 ctgaaactga taaacaacaa tgccacgcgc caaaccaatt ctttatcttt gaaacggttg
     9901 agcgtataag tttcggtcat catcacatac atctgccaca atacggccat acacatgctg
     9961 atgatgcccg ccggtataaa gaaaataccg actatttctt tgttcataat gaatgtaaat
    10021 gctgtttgtt tgtctgacgg aattataaat cagaaaacga agctctcgga acattcaatt
    10081 tgtcggaggc cttaaggccg tctgaaaagt ttcagacggc cttaatgtct atcaaccgtg
    10141 caaagcgcgt ttgtcggccg ccaatgcagc ttcgtgaacc acttcggaca aggttgggtg
    10201 ggcatggata atgcgggcga tgtcttcgct gctggcgaag aattcgagcg cagtcacgcc
    10261 ttcggtaacc aattcgctga caaccggacc aatcatgtgt acgcccaaga tgcggtcggt
    10321 tttggcatct gccaacactt taaccgtacc tttggctttg cccattgcca atgcgcgacc
    10381 attcgcacca aaacctgaag tacctttttt gtactccacg ccttcggctt tgagctgctc
    10441 ttcggtttta cccacccaag cgatttcagg atcggtgtaa atcacgaacg gtacgttgtt
    10501 gaagtcgata tgcggttttt gaccggcaat gcgttcggca acggcaacgc cttcgtcgct
    10561 ggctttgtgt gccaacatcg ggccgcgaac cacgtcgccg attgcccata cgttaggcag
    10621 gttggtacgg cattcgccat ctactttgat aaagccgcgc tcgtcttttt ccaagcctac
    10681 ggcttccgcg ttcaggcctt tggtgtttgg aatacggccg atggcaacga tcagtttgtc
    10741 gaatacttcg gttttggctt cgccagcagc agtttcgtaa gcaacggaaa cacctttgcc
    10801 ttcagacttg atgtcgccga ttttcacgcc caattcgatg ctcagacctt gctctttggt
    10861 gaagtatttg aaggcttctt tggcgatttg ttggtcggcg gcagccagga aggtcggcgc
    10921 ggcttcaaga atggtaactt ccgcacccac gcggttccat acggaaccca tttccaaacc
    10981 aatcacaccg gaaccgatca cgccgagttt ggcaggtact tcggtcaggt tcaatgcgcc
    11041 ttcgttgtcc aatacgttca cattgtcgat agcgacttgc ggcaacggac gcggtacgga
    11101 accggtcgct acgatgacgt gtttggcttc gataacggtt ttctcacctt tgttatcgac
    11161 ttcgatttgg taagcatcgc catttttgcc ggcaaaggaa gccgtaccga acaggctggt
    11221 tactttgttt ttctggaaca ggaatttcac gccgccggtc agtttggtta cgatggcatc
    11281 tttgcgctca atcattttgg ccacgtcgaa ttttacgtcg ccgacagtga taccgtgttc
    11341 ggcaaactcg tgttgcgctg cgtggaaatg ttcgctggat tgcaacaggg ctttagaagg
    11401 gatacaacct acgttcaagc aagtaccgcc caatgcaggg gcattgcctg ctttgttaac
    11461 gcctgcatcg acacaggcag ttttgaaacc cagttgtgcg gcacggatgg cggcaacgta
    11521 tccgcccggg cctgcaccaa tcactactac atcatattga gacatcgtgt catcctttgc
    11581 ttttagcagt atctcaaaat aaaaacgata cttttcgttt cttttttatt ttgaatgact
    11641 gcgttttgat ggttttaaga aaaagccgtc tgaaagtcca tatctgccga ttcattcgaa
    11701 tcaaatgttt cagacggtct caatcgtttg ttgagcctat tgtagcacga tactacatta
    11761 cgctacatct aaatatagtg gattaaattt aaatcaggac aaggcgacga agccgcagac
    11821 agtacaaata gtacggcaag gcgaggcaac gctgtactgg tttaaattta atccactata
    11881 aaaattcaga cggccttttc attaacaaat aaaaggccgt ctgaaacgat tacagatcca
    11941 acaacaggcg ggctgggtct tccaacgcgt ctttaatggc taccaaggtc aatacagctt
    12001 cgcggccgtc aatgatacgg tggtcgtaag acagagccag atacatcatt ggacggacaa
    12061 caacttggcc gttttcaacc acagcgcgct ctttagtggc gtgcataccc aaaatcgcag
    12121 attgaggcgg attgatgatc ggggtggaca tcatagaacc gaaagtaccg ccgttggtaa
    12181 tactgaatgt accgccggtc agatcttcga tagcgatttt gccgtctttg gcttttttcg
    12241 cgtaatcaac aattgcttgt tcgatgtcgg caatgctcat ttggtcggca tcgcgcagga
    12301 ttggcacaac caaaccgcgt gggctgccaa tcgcgatacc gatgtcgaag tagccgtggt
    12361 acacaatgtc tttgccgtca acagaagcat tcacaaccgg gtattttttc agggctgcaa
    12421 cagcggcttt aacgaagaag gacataaagc ccagtttcac gccgtgttct ttctcgaatt
    12481 tttctttgta cttcgcacgc aagtccatga ttggtttcat gttgacttcg ttgaatgtag
    12541 tcagaatggc gttttcttgt tgagaagcca agaggcgttc tgcaacacgg gcacgcaggc
    12601 ggctcatcgg tacgcgttct tcaggacgtg cgccggcagg aagtgcaacg gcaggagcag
    12661 cggctgcggc aggtttggct gcggcatttt gtacgtcttc tttcaatacg cgaccgtcac
    12721 ggccggaacc ttgcaatgcg ttcacgtcaa caccgctctc tgcagccagt ttggcggcgg
    12781 caggcatagc ggcgttgttt tgtgcagcag caggagcggc ggccggggca gcttcggcag
    12841 gagcggcggc aggtgcttca gcagcg
//
LOCUS       DAXHKG010000054        12749 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.054, whole genome shotgun sequence.
ACCESSION   DAXHKG010000054 DAXHKG010000000
VERSION     DAXHKG010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12749
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.054"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(143..233)
                     /locus_tag="ACFMWP_001131"
     tRNA            complement(143..233)
                     /locus_tag="ACFMWP_001131"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(197..199),aa:Ser,seq:gga)
     gene            complement(269..355)
                     /locus_tag="ACFMWP_001132"
     tRNA            complement(269..355)
                     /locus_tag="ACFMWP_001132"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(319..321),aa:Leu,seq:cag)
     gene            complement(391..477)
                     /locus_tag="ACFMWP_001133"
     tRNA            complement(391..477)
                     /locus_tag="ACFMWP_001133"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(441..443),aa:Leu,seq:cag)
     gene            566..2941
                     /gene="rnr"
                     /locus_tag="ACFMWP_001134"
     CDS             566..2941
                     /gene="rnr"
                     /locus_tag="ACFMWP_001134"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HFC5891741.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQF
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEIFEGKISGVANFGIFVTLDDIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAIKVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAGKKTARGGKVRGRGESAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3280..4743)
                     /gene="guaB"
                     /locus_tag="ACFMWP_001135"
     CDS             complement(3280..4743)
                     /gene="guaB"
                     /locus_tag="ACFMWP_001135"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HFC5891742.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSADKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4890..7448)
                     /gene="glnD"
                     /locus_tag="ACFMWP_001136"
     CDS             complement(4890..7448)
                     /gene="glnD"
                     /locus_tag="ACFMWP_001136"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HFC5891743.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKTNRVSVFFREYTAAVETLL
                     AALWVEHFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGGIDELCESVRNDITGDTAFLEARFLFGNRQTADELAEKMNAQRNVAA
                     FIEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATNLPALVK
                     QGILTRTEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYQGLNLRR
                     QSEELMRVFYRAIKTVKQLSGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFERQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSTVAQKEDIQDPSVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLAGNGGNPHALFGRRQQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEIFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQALLEQLA"
     gene            complement(7497..7817)
                     /locus_tag="ACFMWP_001137"
     CDS             complement(7497..7817)
                     /locus_tag="ACFMWP_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC5891744.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPS
                     ESGI"
     gene            complement(8141..8614)
                     /gene="bfr"
                     /locus_tag="ACFMWP_001138"
     CDS             complement(8141..8614)
                     /gene="bfr"
                     /locus_tag="ACFMWP_001138"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC5891745.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLEKEKEKHEALI
                     AAISVAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(8642..9106)
                     /gene="bfr"
                     /locus_tag="ACFMWP_001139"
     CDS             complement(8642..9106)
                     /gene="bfr"
                     /locus_tag="ACFMWP_001139"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC5891746.1"
                     /translation="MQGNQAVLDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(9569..10552)
                     /gene="lipA"
                     /locus_tag="ACFMWP_001140"
     CDS             complement(9569..10552)
                     /gene="lipA"
                     /locus_tag="ACFMWP_001140"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HFC5891747.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(10545..11168)
                     /gene="lipB"
                     /locus_tag="ACFMWP_001141"
     CDS             complement(10545..11168)
                     /gene="lipB"
                     /locus_tag="ACFMWP_001141"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HFC5891748.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNANRTASTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPIVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKGGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11170..11445)
                     /locus_tag="ACFMWP_001142"
     CDS             complement(11170..11445)
                     /locus_tag="ACFMWP_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HFC5891749.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHKLVKVVL"
     gene            11630..12700
                     /locus_tag="ACFMWP_001143"
     CDS             11630..12700
                     /locus_tag="ACFMWP_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HFC5891750.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
BASE COUNT         2719 a         3013 c         3729 g         3288 t
ORIGIN      
        1 ataccgcaaa acataccaca aaaaacggta acggatagtt gtaagcggtt gatgacgatt
       61 atagacaata acgggttttc ccaatgaaat tattgtttga ataataaaaa atcccaaacc
      121 gtaaaagttt gggatttgta tttggcagag aggaagggat tcgaaccctc gatacgctat
      181 tcacgtatac acgctttcca ggcgtgcgac ttaaaccact catccacctc tctaatggcg
      241 gaaattatcc caatcggaat aatttatttg gtgcccggga gaagactcga acttccacac
      301 ccgtgaggat accagcacct gaagctggcg cgtctaccaa ttccgccacc cgggcaatct
      361 aaatattgaa ataaagcaaa gcatttgatt tggtgcccgg gagaagactc gaacttccac
      421 acccgtgagg atactagcac ctgaagctag cgcgtctacc aattccgcca cccgggcttt
      481 gctttatttg ctgttttgcg gtacagtgtc ctgccgcaaa gaagtcgcta ttatatagtt
      541 cataaagaga atgtcaacag tccaaatgaa taaaaatatt aaatctttaa atttacggga
      601 aaaagacccg tttttaagtc gtgaaaaaca gcgttatgaa catcctttgc ccagtcggga
      661 atggataatc gaattgttgg agcgcaaagg tgtgccttca aaaatcgaat cgcttgcgcg
      721 cgagctgtcg attacggaag acgagtatgt ctttttcgaa cgccgtctga aggcgatggc
      781 gcgggacggt caggttttaa tcaaccgccg gggcgcggtt tgcgcggcgg acaaattgga
      841 tttggtcaaa tgccgtgtcg aggcgcacaa agacggtttc ggttttgccg tgccgctcac
      901 gcccgccaaa gacggtgatt ttgttttgta tgaacgccag atgcgcggca ttatgcacgg
      961 cgatattgtc actgttcgtc ctgccggcat ggaccgtagg ggccgccgcg aagggacagt
     1021 tctggatatt gtcgaacgcg cgcaaagcaa agtggtcggc cgtttctata tggatagggg
     1081 cgtggcgatt ttggagccgg aagacaagcg tctgaaccaa agcatcgtat tggaaccgga
     1141 cggcgtggcg cgtttcaaac ctgaatccgg tcaggtcatc gtcggcgaaa ttgaggttta
     1201 tcctgagcaa aaccggccgg cagtggcaaa aatcatcgaa gttttgggcg attatgccga
     1261 cagcggcatg gagattgaaa ttgccgtgcg caagcatcat ttgccgcacc aattcagtga
     1321 agcgtgtgcc aaagccgtga aaaaaattcc cgaccatgta cgcaaaagcg atttgaaagg
     1381 ccgcgtcgat ttgcgcgacc tgcctttggt aacgattgac ggcgaaacgg ctcgagattt
     1441 tgacgatgcg gtgtttgccg aaaaaatcgg acgcaattac cgtctggtcg tggcgattgc
     1501 cgatgtcagc cattatgtcc gccccgatga cgctatcgac acggacgctc aggaacgcag
     1561 caccagtgtt tacttcccgc gccgcgtgat tcccatgttg ccggaaaacc tgtccaacgg
     1621 catctgctcg ctcaatccta atgtcgagcg tttgtgtatg gtgtgcgata tggttatcac
     1681 ttacgcgggc aatattaaag aataccgctt ctaccccgcc gtgatgcgct ctcatgcccg
     1741 cctgacctac aaccaagttt ggaaatggct ttcaggcggc atcgggcatc cgttcaaagc
     1801 ccaaatcgac acgctttaca aactcttcaa aatccttcag aaaaagcgtt tcgaacgcgg
     1861 ggcggtggag tttgacagca tcgaaaccca aatgcttttc gacgacaacg gtaaaattga
     1921 aaaaatcgtc cccgttgtcc gcaacgatgc ccacaagctg attgaagaat gtatgttggc
     1981 ggcaaacgtt tgcgcagcgg attttctgtt gaaaaacaag cataccgcat tgttccgcaa
     2041 ccatttgggg cccacgcccg aaaaactcgc cgccttgcgc gagcagttcg gtctgttggg
     2101 gcttcaactt ggcggcggcg acaacccgtc gccgaaagac tatgccgcgc ttgccggaca
     2161 gttcaaaggc aggccggatg ccgaattgct gcaagtcatg atgttgcgct ccatgcaaca
     2221 ggcggtttac gaaccgcatt gcgacggaca ctttggtctt gcctacgaag catacgccca
     2281 cttcacctcg cccatccgcc gctatcccga cctgaccgta caccgcgcca tcaaagccgt
     2341 gttgaatcag caaacctaca cgccaaaaaa aagctggcag gctttgggcg tgcatacctc
     2401 gttctgtgag cgccgtgccg acgacgccag ccgcgacgtg gaaaactggc tgaaaaccta
     2461 ctatatgcgt gacaaagtcg gcgaaatatt tgaaggcaaa atttccgggg tggcaaattt
     2521 tggaatattt gtcactttgg acgatatcca tatcgacggt ctggtgcata tcagcgattt
     2581 gggcgaagac tatttcaact tccgccccga aatcatggca atcgaaggtg aacgcagtgg
     2641 catccgtttc aatatgggcg acagggttgc cattaaagtg gcccgtgccg atttggatga
     2701 tggaaaaatc gattttgtcc tgattgccga ggggagcggc agagggcgga aagttaaatc
     2761 atccgcgtct gccaaaccgg cagggacggc ggggaaaggg aagccgaaaa ccgccgccgg
     2821 gaaaaaaaca gcccgaggcg gcaaagtaag gggaaggggc gagtctgccg ccgcagaatc
     2881 ggggaaaaag gcaaagaaac cggttccgat taaggtaaaa aaacggaaag gcaaatcata
     2941 atgctgacgg ggcggcttgg ggagggaggg gcatactttc ccgaagccgc cgcccgattt
     3001 tttgatatgg cggccggcgc atcatttcag gccaatcgaa acgcccgtat tgaaagattg
     3061 cgtttatttc caccgccgtt ttaaaggcca gcggtattcg gcagacgggg cgcaaacggc
     3121 gttcagacgg cattttcatt ctttcggcgt gtccgtccga atggctttgc ccgtccgcgc
     3181 aatcagcccg tgcggcttgc cttgaacgga caaaaaatgc cgtctgaaac ccgaaaatca
     3241 ggtttcagac ggcattttgc cttgaaaagg ctgttcaaat cagcggtggt agttcggtgc
     3301 ttctttagtg atttgaacgt cgtgaacgtg cgattcgctc atacctgcgg aagtgatttc
     3361 cacaaattcg gctttttcgt gcatttcggc aatattggcg caacccaagt aacccatact
     3421 ggaacgcaga ccgccggtca gctggtggat gatgttcaca atcgggcctt tgtaaggaac
     3481 gcggccttcg atgccttcgg ggacgtattt gtctgcgctg tcggttttgt cttggaagta
     3541 gcggtcggca gaaccttggc tcatcgcgcc caaggaaccc ataccgcgat aggatttgta
     3601 cgagcggcct tggtagagtt cgatttcgcc cggcgcttct tccgtgcctg caaacatacc
     3661 gccgagcatg acgctgtacg cgcctgcggc gagggctttg gcgatgtcgc cggagaagcg
     3721 gatgccgccg tcggcaatca gcggaacgcc cgtgcctttg agggcttcgg caacgttgtg
     3781 aatggcggtc agttgcggca cgccgacacc tgccacgata cgggtggtgc aaatcgatcc
     3841 cggaccgata ccgactttga cggcatccgc gccggcggcg accaaatcca atgcggcttt
     3901 ggcagtggcg atgttgccgc cgatgacttg gatgtgtgga taggtttctt tcacccattt
     3961 cacgcggtca atcacgcctt ggctgtgccc gtgggcagta tcgacgacaa tcacgtccac
     4021 gccggcttcg accaaggctt tgacgcgctc ttcggtatcg ccgccggtgc cgactgccgc
     4081 accgacgcgc agacggccct cggagtcttt gttggcgttg ggaaactcgg tggtttttaa
     4141 aatatcttta acggtaatca gacctttgag ttcgtctttt tcgttcagaa ccaaaacgcg
     4201 ctcgactttg tgcgtgtgca tcagttcgcg cgcttcgtct atgcttgtgc cttcggggac
     4261 ggtaaccaga cgttcgcgcg gggtcataat ggcggaaacg ggcaaatcga cgcggttttc
     4321 aaaacgcagg tcgcggttgg ttacgatgcc gacgactttg ccgttttcaa cgacgggcag
     4381 gccggacatt ttgcgtttgc gctgcgcgcg catttccaag acttcgcgga tgagcgtcgt
     4441 cggtgcaacg gttacggggt ctttgaccac gccgctttcg tggcgtttca ctttggaaac
     4501 ggcgcgcgcc tgcatttcgg gcggcatgtt tttatggatg atgccgatgc cgccttcctg
     4561 tgccatcgaa atggcgaggc gcgcctcggt aacagtgtcc atcgcggcgg aaagcagggg
     4621 gaggttaagt gtgatttcgc gggtgagctt ggtttgaagt ttaacgtctc gcggcagcac
     4681 ggtcgaatgt gcgggaacca acaaaacatc gtcgaaagta taggcttttt ctacgatacg
     4741 cataatgctc ggtctttcag tttgtgcaag atgcacggca ttatagcacg ttaccggcgg
     4801 cttgacagtc tatattgttt gcaatatccc ccgccttcag acggcatacg gcgcggcggc
     4861 ggaatgccgt ctgaaaaccg gcagggtgct tatgccaact gttccagcaa agcctgtttc
     4921 aatgaggact ggatttttgg gtttttcagg tcggggctaa aaacggtaaa actgtcttcg
     4981 gcgcgttcat ccagtgtgga gattttggca tagcgcaggc tgacgttgtg ggcgaaaaag
     5041 atttccgcca tatcggcgag caggaagggg cggttgacgg cggtaatttc gacggagtac
     5101 cagtcggggt agtcttcttc gggggtaatg gtgatgcttg gcgcgatcgg catgtagcgg
     5161 ctgcggcggc tgatgcggcg gctatggctg gagatttcgg caacggtgtg tccgtggata
     5221 aagctgttga gttcggcttc gagcgcgctt tggatgtcgg ggtagtcttc gggagcgtgc
     5281 tgcgagggga tttgcacgat gaaggtgtcg aggatgtagt cgtgttcggt gataaaggcg
     5341 cgggcggcga gaatgtcgaa gccgtggcgg ctgaagatac ggcagaggcg ggcgaacagg
     5401 cgcgggccgt tgggcataaa gaccatcact tggaagctgt cgctttgggg caggatgcgg
     5461 ctgcggacga tgggggtttc aaaatcgtgt acgaggttgg cggcgtgcca caggatttcg
     5521 cgggactggt ggcgggcgaa gtaggcggaa ccgagcgcgt tccaaagctt tttctgctgt
     5581 ttttcgggga cggcggcgcg ggtgagcaag tcggcggctt cttgttggcg gcggccgaag
     5641 agggcgtgcg ggttgccacc gttgcctgcg aggtagcgtc cggcggcatg gaagaggctt
     5701 tccagcaggc tggcgcgcca tgcgttccac agcttgggat tggtaccgcg tatgtcggaa
     5761 atggtcagaa ggtagagcgc gctgaggcgt tcgtgggttt ggacgcgttt gcagaaggca
     5821 tcgagtacgc tggggtcttg gatgtcttct ttttgggcga cggtggacat aagaagatgg
     5881 ttttcaacca gccaggcgag caggtcgctt tcttcttcgg tcaggaagtg gtcggcggca
     5941 aattggcgcg cgtctgcgat gccttgtatg gcatggtcgc cgccgcgtcc tttggcgatg
     6001 tcatggaaaa aggcggcaag gtagaggatg tcttgtcttt caaaggactg catcagtgca
     6061 gaggcgtagg gcagctcgtg gctgtgcata tccaaggcaa ggcggcggac gttgcggacg
     6121 acggtgagga tgtggtcgtc cacgggatag atgtggaaca ggtcgtgctg gagcaggccg
     6181 acgatttttt cccacgcggg caggtagcgt cccaatacgc cgtagaggtt gaggaagcgc
     6241 agggtttggg tcagtccgtt gccgttgcgg aaaaagccgg cgaagcggtg gcggttttca
     6301 gaattttggt agaagctgcg gttgattttg cgcgtcgcgc cccaccatgc gcgcagggtt
     6361 tgcggttcga gcgcggtaat atcgttgcgc tgctgcatga tttcgacgat tttgaaaatg
     6421 tgttcgggcc gtctgaaaaa aatatcggtg tgccgcgcgg cgatttggtt gttgacttgg
     6481 atgtagtcgt cgtcaatccg cagggtaacg cgcaacgggg tggaggaaac gcggctttgc
     6541 agcataggcg tgaggatgcc gctcagttgt ttgacggttt taatcgcgcg gtaaaacacg
     6601 cgcatcagtt cttcgctttg acggcggagg ttcaagcctt gataacccat actttcggcg
     6661 acttgcggct gcaaatcgaa cagcaggcgg tcttcggcgc gcttggcgtt taaatgcaga
     6721 tggatgcgga tgtgggcgag gcggcggtag ccgtgtgaaa gcataccggc ttcagtgcgc
     6781 gtcagaatgc cttgtttgac cagcgcaggc aggttggtcg ccaagccttg tgctttcgct
     6841 atccaaagca gggtatggat gtcgcgtaga ccgccgggac agcttttgat gtttggttcc
     6901 aacaccgctc ccgaaccttg cgatttggca tggcggtgtt ccatctccac caattttgct
     6961 tcgataaatg ccgctacatt gcgttgcgcg ttcatttttt ccgccagttc atccgccgtt
     7021 tggcggttgc caaacaaaaa acgggcctct aaaaacgctg tgtcccccgt aatatcattg
     7081 cgcacgcttt cgcacagttc gtcaatgccg ccgcttttta cagacggcat cagtttgcag
     7141 tcccacaggg tttggacaaa ccgggcaatc tgttcctgaa tgccgtctga aagcggggca
     7201 ggggagacaa ccgccaaatc cacatccgaa cagggataca gttcgccgcg cccgaagccg
     7261 cccaccgcca tcagacataa cgcgctgttt tgaaaatgtt ctacccacaa tgctgccagt
     7321 aaggtttcga ctgccgccgt gtattccctg aaaaataccg acacgcggtt ggttttcaaa
     7381 taatgcgctt cggcggcatc gcgctgctgt ttgaaggttt ccagtgctga agacaggttt
     7441 gcaggcattt ttattctttc gattggcggg aaaaagggag gcggatggtt cagcggtcaa
     7501 ataccgcttt cagacggcat ttgtcgggta tcggcggaat tggtcatcag gttcaaccgt
     7561 tcctgcggcg gcagcagcaa ctgatacgcc gccacgccca aggccgccgc cattttttcg
     7621 atattcgaca gggcgatgtt ccagcgtttg cgctcgactg ccgacacata agtcctgtcc
     7681 aaaccgcatt gccgcgccaa ttcttcttgc gaccaaccct tgttcacgcg gaaaagccgc
     7741 atattgtatg ccaataccgc ccgcaaatcc tgctcgtcag gcagttcggc aggcagagtc
     7801 aatttgttgc ccatcatttg tttccggata aatgttaaag ttaagcattt gctgttacgg
     7861 attttacttc acataaaagc taaaaaaaag gggtggcggc agccacaccc aaacacacac
     7921 acatcaagag gaaagaggta aaatcaagac agattgggaa acagcaaaca aacaatctag
     7981 atttcatgtc ggtattatca aacaaaaacc gttatcgagt attgattcaa atcaatttcg
     8041 attttattcg caatccgata aagaaaaacg gcatatccgt ttatatggat atgccgtctg
     8101 atggtgcagg ggactgctat atttggcagt gatttgtgtt ttagtcctct tgcgccgctg
     8161 tttgcaggta gttcggcaaa ccgattttgc cgatcagttc ctgctgggtt tcgagccagt
     8221 cgatgtgttc ttcgttggtg tctttttgtt tttccaacaa atcacggctg acataatcct
     8281 gttgcgcttc tgccacggaa attgccgcaa tcaatgcctc atgtttttct ttctcttttt
     8341 ccaaatcgca ggcgatgatt tcttcggtgg actcgccaat cagaagcttg cccagttctt
     8401 gcaggttcgg cagaccttcg aggaacagaa tgcgctcgat caaatcgtcg gcagctttca
     8461 tttcaacgat ggactgtttg aagaaatgtt cgcccagttc ttcaaagccc cagtttttca
     8521 aaatacgggc gtgaaggaaa tattggttga tggttaccag cagcaagcct aagtttttgt
     8581 ttagctcgcg gataaccaga cggtcgcctt tcatacggac tccttttatt ccgaatacgg
     8641 attacagttg gctttggtag tagttgcctt cgccaattaa ctcgatcagg cgaagctgct
     8701 gttccagcca gtgggcgtgg tcttcttcgg tatctttcag ttgggcaacc atcaggtcgc
     8761 gcgtaacata gtcttgagcc tcttcgcaca gtttgatgcc ttttttcaac gcatcacgta
     8821 cttcatattc ggtttgcagg tcggctttga ggcaggaaac cacgtccgtg ccgatattca
     8881 gttcggcgcg tgccattttc ggcgtgccgc ccagcatcag gatgcggcgg atgaagtctt
     8941 cggcgtgtgt ggtttcttct tccatctcgt ggttgagacg ttcaaaaagt ttggtgtagc
     9001 cccattcgga gtagaggcgg gagtggataa agtattggtc gcgtgccgcc agctcgccag
     9061 acagcaattc gttcatgtaa tctaaaactg cttgattgcc ttgcataata tttctctttt
     9121 cttaatttgg gtttcgtgta gttaaacagt ggatgtagca ctgttcggaa tgcgtgcatt
     9181 gtatgcaaaa gctgtcggca tgacaaattt tctatttaaa atacaaacaa ttatcaaaag
     9241 aaatagggcg tattccccga tgccttccaa atcagtatgc tgttttttat cggttttttg
     9301 tgctgttaaa actaataatc catattatcc ataaagaaca tttacacttg ttaaccatag
     9361 ctaaaagcaa atacggtacg gttttttatc aaaatttata atgaatcgtt ctcattaacc
     9421 gacagattct tttgagatta tcggattttg ggaataaatt atgccgtctg aggggctttc
     9481 agacggcata gacaattaaa gctgattaaa caacgcggca gacagcagcg taggaaatta
     9541 ttttttactt cggaacggta ttttgggttt aatgatgccc gcaaccgccg tggctttcgc
     9601 gtaaggcttc ggcagcctgt tcgtcggcgt ggtagctgga acgtaccatc gcgccgatgg
     9661 cggcattgct gaagcccagt tcgtatgctt ctttttcaaa gattttgaac tgctcgggcg
     9721 taacgtagcg caggacgggc aggtgtccgt ctgaaggctg gaggtactgt ccgatggtaa
     9781 tcatttcgat attgtgcgcc cgcatatcgc gcataatttc acgcacgtct tcgtctgttt
     9841 cgcccaagcc gaccatgatg ccggatttgg tcgggatgtg cggcatcatt tctttataac
     9901 gttttaataa gtctaaagaa tgttgataat tggcaccggg acgggctttt ctgtacaggc
     9961 tcggatgggt ttctaggttg tggttcatca cgtcgggcgg ggtttcggca aggattttga
    10021 gtgcgatgtc caagcgtcct cggaagtcgg ggacgaggat ttcgattttg gtgttcgggc
    10081 tggtttcgcg gatggctttg atgcagtcgg cgaaatgctg tgcgccgccg tcgcgcaggt
    10141 cgtcgcggtc gacggaggtg atgacgacgt aacgcaggtt catggctttg acggattcgg
    10201 cgaggttttt cggttcgtcg gggtcgagca tattgggccg accgtgtccc acgtcgcaga
    10261 acgggcagcg gcgggtgcag atatcgccca taatcatgaa ggtcgccgtg cctttgctga
    10321 agcattcgcc gatgttgggg caggaggctt cctcgcaaac ggtgtgcatc ttttgttcgc
    10381 gcaaaatgtc tttgatttca aagaatttgc gcgatgggag tttggcgcgt atccattcgg
    10441 gctttttcag tttttcctga agggggacga ctttgatggg gatgcgcgcg gttttgtccg
    10501 cgcctctgag tttgatgccg cgtttggggt cgtcggtttt gatttcactc attgttatct
    10561 gctttcggtg tgaattgtgt ttcaaggtgt gcggtaagtt tggcggcgac ttcgtccggc
    10621 gtggggcagg gttggacaaa atccgcgatt tgcgtcattt ccataccggc gtagccgcag
    10681 gggttgatgt gggtaaacgg gcttaaatcc atattgacgt tgagcgcaag gccgtgatag
    10741 acggaacctc ctttgatacg cagccccagt gaggcgattt tgcgttcgcc gacgtaaacg
    10801 ccggggcgtt tgggatctgc cgccgcttcg atgccgtatt ccgccaatgt ggcgatgatg
    10861 ctgttttcaa gcgcggaaac aatgttgcgg acgctggttt tgcgccgttt gaaatcaatc
    10921 atcgtataaa cgaccaattg cccgggtccg tgataggtaa tctgcccgcc ccggtcgatt
    10981 tggacgatgg gaatgtcgtc gcggatcagc aggtgttcgg gtttgccggc cagcccctgt
    11041 gtgaacacgg ggggatgttc taccacccac aattcatctt cggtagaggc ggtacggttg
    11101 gcgttgaaag ttttcattgc ctcaaaagtc ggcagatatt caaccaaacc tttatgtatg
    11161 attttcatct caaagtacca ctttgaccaa tttgtgcgaa gtcagcgcgc ggtagatatt
    11221 gtcaagttgt tcttggtttt caacctttac ttgtacggtg gcgccggtat agttgccttt
    11281 gctgctcgga cgcgtggtga tgtggtgcgc ctgcgtgtcg ggggcgtgga ggcggacggt
    11341 gtccaatacc gcctgctcga actcgggatg caccgcgccc attactttca atgggaaggt
    11401 gcagggaaat tcgatgaggg atgttttgtt tttttgttcg gtcatgatgt gctgccttgt
    11461 cgtgtacggt atgccgtctg aaggcgggtt tgcctttcag acggcatcgg atgtgcgtta
    11521 ttttagccta aaccgcgata acaggctatc gggaaggcgg aggctttttt gacggcgcgg
    11581 cggttctgct atactggcgc acaatattat ttttagaagg gtggttttta tgtatcggag
    11641 gaaagggcgg ggcatcaagc cgtggatggg tgccggtgcg gcgtttgccg ccttggtctg
    11701 gctggttttc gcgctcggcg atactttgac tccgtttgcg gttgcggcgg tgctggcgta
    11761 tgtattggac cctttggtcg aatggttgca gaaaaagggt ttgaaccgtg catccgcttc
    11821 gatgtctgtg atggtgtttt ccttgatttt gttgttggca ttattgttga ttattgtccc
    11881 tatgctggtc gggcagttca acaatttggc atcgcgcctg ccccaattaa tcggttttat
    11941 gcagaacacg ctgctgccgt ggttgaaaaa tacaatcggc ggatatgtgg aaatcgatca
    12001 ggcatctatt attgcgtggc ttcaggcgca tacgggcgag ttgagcaacg cgcttaaggc
    12061 gtggtttccc gttttgatga ggcagggcgg caatattgtc agcagtatcg gcaacctgct
    12121 gctgcttccc ttgctgcttt actatttcct gctggattgg cagcggtggt cgtgcggcat
    12181 tgccaaactg gttccgaggc gttttgccgg tgcttatacg cgcattacag gcaatttgaa
    12241 cgaggtattg ggcgaatttt tgcgcgggca gcttctggtg atgctgatta tgggtttggt
    12301 ttacggcttg gggttggtgc tggtcgggct ggattcgggg tttgcaatcg gtatggttgc
    12361 cggtattttg gtttttgttc cctatttggg cgcgtttaca ggactgctgc tggcaaccgt
    12421 cgccgccttg ctccagttcg gttcgtggaa cggcatcttg gctgtttggg cggtttttgc
    12481 cgtaggacag tttctcgaaa gttttttcat tacgccgaaa atcgtgggag accgtatcgg
    12541 gctgtcgccg ttttgggtta tcttttcgct gatggcgttc gggcagctga tgggctttgt
    12601 cggaatgttg gcaggattgc ctttggccgc cgtaaccttg gtcttgcttc gcgagggcgt
    12661 gcagaaatat tttgccggca gtttttaccg gggcaggtag gcggttccga aacatatttg
    12721 aagcggaata caaccctgcc cgagtttaa
//
LOCUS       DAXHKG010000055        12546 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.055, whole genome shotgun sequence.
ACCESSION   DAXHKG010000055 DAXHKG010000000
VERSION     DAXHKG010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.055"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(195..1046)
                     /locus_tag="ACFMWP_001144"
     CDS             complement(195..1046)
                     /locus_tag="ACFMWP_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HFC5891751.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDARFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QEAACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLQHALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPAALHIVRNALDSIDGNRSQTLARIKKHLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESLEIPAA
                     HKRKTAE"
     gene            1394..2908
                     /gene="katA"
                     /locus_tag="ACFMWP_001145"
     CDS             1394..2908
                     /gene="katA"
                     /locus_tag="ACFMWP_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HFC5891752.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2984..3121
                     /locus_tag="ACFMWP_001146"
     CDS             2984..3121
                     /locus_tag="ACFMWP_001146"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891753.1"
                     /translation="MPSETSFDRFRRHFPIPPPPFQWAFFIKRKISRHSHAGGNLERK
                     I"
     gene            complement(3208..3405)
                     /locus_tag="ACFMWP_001147"
     CDS             complement(3208..3405)
                     /locus_tag="ACFMWP_001147"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891754.1"
                     /translation="MVGLVGCRVGFSPPPPPILPLSDGIGLPVPVRLADWWGWWDWWS
                     WWAEAHPTPTLQPILQSDTAY"
     gene            complement(3529..3657)
                     /locus_tag="ACFMWP_001148"
     CDS             complement(3529..3657)
                     /locus_tag="ACFMWP_001148"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891755.1"
                     /translation="MPAPVRLAELVEWWDWWAEAHPTSTLSPVLCIYLTHPPYVNT"
     gene            3662..3811
                     /locus_tag="ACFMWP_001149"
     CDS             3662..3811
                     /locus_tag="ACFMWP_001149"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891756.1"
                     /translation="MPSEGGGIGGGGGLKPTLQPPHPQKNQKKPNLTKSDKKRQPETD
                     KNCHN"
     gene            4069..4515
                     /locus_tag="ACFMWP_001150"
     CDS             4069..4515
                     /locus_tag="ACFMWP_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009289 - pilus [Evidence IEA];
                     GO_process: GO:0007155 - cell adhesion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC5891757.1"
                     /translation="MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEAL
                     TLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIKGKYVASVKVEGNASVASITATM
                     NSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK"
     gene            4969..5469
                     /locus_tag="ACFMWP_001151"
     CDS             4969..5469
                     /locus_tag="ACFMWP_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5891758.1"
                     /translation="MSNYRRDFTRGAHYFFTLALQDRTKDYLIRHIDRLRLAYRETKT
                     RYPFETAAICILPDHLHFIMRLPEGDHDYPIRIAYLKTRFSQLIPKECRAPNGSKTKK
                     REAGIWQRRFWEHLIRDEQDLNNHRDYIYFNPVKHGYAASVKEWRYSSFFKDVEKGIY
                     PLDWGG"
     gene            5933..6499
                     /locus_tag="ACFMWP_001152"
     CDS             5933..6499
                     /locus_tag="ACFMWP_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HFC5891759.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMHEGLSGEAEDARENKRES
                     WWLTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVLVAVGLTVGRALGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIG"
     gene            complement(6775..8811)
                     /locus_tag="ACFMWP_001153"
     CDS             complement(6775..8811)
                     /locus_tag="ACFMWP_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HFC5891760.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSESKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDDGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLGLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGKTIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSAHEETGVPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKKVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(8899..9771)
                     /locus_tag="ACFMWP_001154"
     CDS             complement(8899..9771)
                     /locus_tag="ACFMWP_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HFC5891761.1"
                     /translation="MEIWNRLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            10041..12431
                     /gene="gyrB"
                     /locus_tag="ACFMWP_001155"
     CDS             10041..12431
                     /gene="gyrB"
                     /locus_tag="ACFMWP_001155"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HFC5891762.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLNV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
BASE COUNT         2957 a         3377 c         3467 g         2745 t
ORIGIN      
        1 cattcccgcg aaagcgggaa tccaggttcg ttgagtttcg gtcatttccg ataaattctt
       61 gcaactttga gtttctagat tccctctttc gcgggaatga cgggatgcag gtttccgcgc
      121 ggacggattc ggcattcccg ctttcgcaga aatgccggct tttggtttgt tgtctttata
      181 agattattca gcaattattc tgcggttttg cgtttgtgtg ctgccggaat ctcaagggat
      241 tctctgtatt tggcaatggt gcggcgagaa acctccatgc cgcggaaagc cagcaggttg
      301 gcgagtgcct cgtcagaata cggcgtgggt gtggacgagg caaaaccggc ggcgggaaag
      361 ggattgagcg aagcaatgag gtcgagtgcg gcttcgagtg tgccgctgtc ggtttggggc
      421 aggtgttttt ttattcgtgc gagggtttgg ctgcggttgc cgtcaatgct gtcgagggcg
      481 tttcggacga tatgcagggc ggcgggtttg gcagcacatt cgcccgatct ttctatctgc
      541 agtatcagcg attcgttcaa atcggcggcg gccacgcctg ccgggtcgaa ttttttcaat
      601 gcggtcagcg cgtgttgcag cattgcttca tccaacatcc actctaaggg cgtatggtcg
      661 aggatgtctt cgatgctgtc ggtcagataa ccctgctcgt caaggaaatc gataaggatg
      721 tggacacagg cggcttcttg gtcggaaagc gggtgttcgc atacttgcgc gtgcaggtat
      781 tgcttgaaat cctgctcacc ggcgatgttg gacagcatat cttcgccttc gtctccgccg
      841 atttgacggg caggcgcggt gtaatgggaa aacctagcat cggaaaattc atccgtgtct
      901 ttgcgttcga gcagggggtt gtccgacagc cagttttcga cctcgcgttc aagttcgata
      961 cccgacatct gcaatacgcg caaagattgt tgcagccgct ggttgagctg ctgggtctgt
     1021 ttgagcttta ttccgagtaa ggtcatgata atgtggggaa aattgttatt ttcagcctgt
     1081 cggcgcaaaa aatgccgcaa agcgtcattg cattataaat ggttttaatg agcgggttcg
     1141 gattccgttc gataacaaaa aacaaacgaa aatcaagaac cgattgctta taataatatt
     1201 aaatcgattt catagtttta atagcgaaaa tcttggcgta tagtcgcatc catagttttt
     1261 acaaaaggga aacaaaatgt cgattcaaga aatttattgc aatcaagaaa ccggttacga
     1321 atacgctttc cgccaaatcg tactgtaagc cgtttacccc catttgacca acctgagaaa
     1381 aggaacaaga gcgatgacta cctccaaatg ccccgtaacc catctgacca tgaacaacgg
     1441 cgcgcctgtt gccgacaatc aaaacagcct gaccgccggt cctcgcggcc ctctgctggc
     1501 gcaggatttg tggctgaatg aaaaactcgc cgacttcgtg cgcgaagtca tccccgaacg
     1561 ccgtatgcac gccaaaggtt cgggcgcgtt cggtacgttt accgtaacgc acgacatcac
     1621 caaatacacc cgcgccaaaa tcttcagcga agtcggcaaa aaaaccgaga tgttcgcccg
     1681 tttcaccacc gtggcaggcg aacgcggcgc agccgatgcg gaacgcgaca tccgcggctt
     1741 tgccttgaag ttctataccg aagaaggcaa ctgggatgtg gtcggcaaca acacgcccgt
     1801 gttcttcctg cgcgacccgc gtaagttccc cgacctgaac aaagccgtca aacgcgaccc
     1861 gcgcaccaat atgcgctctg ccacaaacaa ctgggacttc tggacgctgc tgcccgaagc
     1921 actgcaccaa gttaccatcg tgatgagcga ccgcggcatc cccgccggct accgccatat
     1981 gcacggcttc ggttcgcata cctacagctt ctggaacgaa gcaggcgagc gtttttgggt
     2041 gaaattccat ttccgcaccc aacaaggcat taaaaacctg accaacgaag aagccgccaa
     2101 aatcatcgcc gacgaccgcg aaagccatca gcgcgactta tacgaagcca tcgaacgcgg
     2161 cgagtttccg aaatggacga tgtacatcca agtcatgcct gaagcagacg cggaaaaagt
     2221 accttatcat ccgtttgact tgaccaaagt ttggccgaaa aaagactatc cgctgattga
     2281 agtgggcgaa ttcgagttga accgcaatcc cgaaaacttc ttcgccgatg tggaacaatc
     2341 cgccttcgca ccgagcaacc tcgttcccgg tatcggcgcg agcccagata aaatgttgca
     2401 agcccgtttg ttcaattacg ccgacgcgca acgctaccgc ttgggcgtga acttccgcca
     2461 aatccctgtc aaccgtccgc gttgccctgt tcacagcaac cagcgcgacg gacaaggacg
     2521 cgccgacggc aactacggca gcctgccgca ctacgaaccc aatagcttcg gccaatggca
     2581 gcaacaaccc gacttcgccg aaccgccttt gaaaatcaac ggcgacgcgg cgcactggga
     2641 ctaccgccaa gacgatgacg actatttcag ccaaccgcgc gccctgttca acctgatgaa
     2701 cgacgcgcag aaacaggcat tgttcggcaa caccgccgcc gcaatgggcg acgcgcccga
     2761 cttcatcaaa taccgccata tccgcaactg ctaccgttgc gatccggcat acggcgaagg
     2821 cgtggcaaaa gccctcggac tgactgtcga agacgcacaa gccgcccgcg cgaccgaccc
     2881 cgcactcggc cagcccggtt tgctgtaagg gggcattatg tggatggaaa ttgaagaaat
     2941 cctgtcccgc gccgtccgct accggaaata accgggcata aaaatgccgt ctgaaacgtc
     3001 gtttgaccgc ttcagacggc atttccccat cccgcccccg ccgtttcagt gggcgttttt
     3061 tattaaacgc aaaatatccc gtcattccca cgcaggcggg aatctagaac gtaaaatcta
     3121 aagaaacctt tttccccata agtttccgca ccgacagacc tggattcccg cctgcgcggg
     3181 aatgacggtt taggtatttc tgacgattca gtaagccgta tcggactgta gaatgggctg
     3241 taaggtgggc gtagggtggg cttcagccca ccaactccac caatcccacc aaccccacca
     3301 atccgccaat cttaccggta ccggcaaacc gatgccgtct gaaagcggca gaatcggcgg
     3361 aggcggtggg ctgaagccca ccctacagcc caccaatccc accaacccac ttttccgcgt
     3421 cattcccacg aaagtgggaa tctagaacgt aaaatctaaa gaaacctttt tccccgataa
     3481 gtttccgtgc cgacaggtct ggattcccac ctgcgcggga atgacggttt aggtattcac
     3541 ataaggcgga tgtgtaaggt agatgcatag gacgggcgat agggtggacg tagggtgggc
     3601 ttcagcccac caatcccacc attccaccaa ctccgccaat cttaccggtg ccggcaaacc
     3661 gatgccgtct gaaggcggcg gaatcggcgg aggcggtggg ctgaagccca ccctacagcc
     3721 accccacccc caaaaaaacc aaaaaaaacc caatctgaca aaatctgaca aaaaacgtca
     3781 gcccgaaact gacaaaaatt gtcacaactg acaagaaacg tcagcccgcc gcattattac
     3841 gccgcaagcc gcgccgcgtt gatataaaaa aatacccata ccagacagac aaataaaaaa
     3901 atattctgta aaatgccgag ctgaaccctg ttttggcacg ccgcttgctg gtaagaaggc
     3961 gaaccgaagt aaaaaaaacc acggtcaaat acattacggg tttacgtttg cggcggatgc
     4021 cgcaaatttc caatcaaact taaacatttt caaacaggag tcatccaaat gaaagcaatc
     4081 caaaaaggtt tcaccctgat cgagctgatg atcgtcatcg ccatcgtcgg tatcttggca
     4141 gccgtcgccc tgcccgcata ccaagactac accgcgcgcg cccaaatgtc cgaagccctg
     4201 actttggcag aaggtcaaaa atccgcagtg gtcgagtatt attccgacaa cggcacattc
     4261 ccgaacagca atacttccgc aggtattgct gcctctaacg agattaaagg taagtatgtg
     4321 gcatcggtta aggttgaagg taatgcctct gttgcttcta ttaccgctac catgaactct
     4381 agtaatgtga ataaggacat caaaggtaaa accttggtac tcgtcggcaa acaaaactcc
     4441 ggctcgttct cttgggaatg taaaaaaggt tctgtggacg aaaaattctt gccatctacc
     4501 tgccgcacca aataaggaca atgaccgggt ttgacccggt cgtgaaaaca aatgccgccc
     4561 gaaccgctcg ggcggcattt tctattcccc tttgccgctg tagggctgta gggtgaggcg
     4621 taggtgcgta gggtgggctg tagggtgggc ttcagcccac cattccacca acccaaccaa
     4681 ctccaccaca tcaaggattt ttggcgaacc gttgggattc ggcgggtttc gagtttcggc
     4741 ggggattggc ggaatggttg gtttgggttg ggtgggaatg gttggattgg cggaatggtg
     4801 ggctgaagcc caccctacga aacaccctac gaaacaccct acagcctaca catcagccct
     4861 acgccctccc tacccatttc cctgcaaatc ccctaaaaat cctcccgcac gccctgaaaa
     4921 caaggaataa tacaggtttc cgcccatcgg gctaaaaagg ggataaatat gtcaaattac
     4981 cggagggact tcacgcgcgg ggcgcactat tttttcacat tggctttgca agacaggacg
     5041 aaggattacc tgatacggca tatcgacagg ctgcgcctcg cctatcgtga aacgaaaaca
     5101 cgttatccgt ttgaaacggc ggcaatttgt attttgccgg atcacctgca tttcattatg
     5161 cggctgccgg aaggcgacca cgattacccg atacggattg catatttgaa aacccggttt
     5221 tcccaactca tccccaaaga gtgccgcgcc cccaacggga gtaaaacaaa aaaacgcgaa
     5281 gccggcattt ggcagcgcag gttttgggaa cacctgatcc gggacgaaca agatttaaac
     5341 aaccaccggg attatattta tttcaacccc gtgaaacacg ggtatgcggc gagtgtgaag
     5401 gaatggcgtt attcttcctt cttcaaagac gttgaaaaag gcatttaccc tttggattgg
     5461 ggagggtaaa gctcccgccg ccgccaaaat ccgcaggacg gacgcggggc agatgagtcg
     5521 ggcgggacgt agggtgaggc gtaggtgcgt agggtggatg tgtagggtgg gcttcagccc
     5581 accaatccaa ccacctccgc caatccaacc attcccacca acccaaacca accattccgc
     5641 caatccccgc caaaaaccga aaccgccgaa tcccgacggt ttgccaaaaa cccttgatgc
     5701 ggtggaattg gcgggattgg atgagttggt ttggcagaat tggtgggctg aagcccaccc
     5761 tacagcccac cctacaaccc gccctaagtc ccacctacgt tccatccgac gcatccgccc
     5821 tacggttccg gattcccctg cgaaccgccc cgcgcacgaa aactgcttta cgcggcgttt
     5881 ttcgcgtttt gctgttttgc tataatccgc cctttttaag gacgggtgcg gtatgagtct
     5941 ttacgctttg ctcttgattg cgctggggat gtcgatggat gcgtttgccg tcgcgctggc
     6001 aaagggtgcg gcggtcagga tgcctccgcg caaaattgca gcaacagcct tggtgttcgg
     6061 cacggttgaa gcgctcacgc cgctggcagg ctgggtaggc ggtttttatg ccaagccgtt
     6121 tatcagcgaa tgggaccatt gggcggcttt cgtcctgctg ggcgggctgg gtctgaaaat
     6181 gatgcacgaa gggttgtccg gcgaggcgga ggacgcgcgg gaaaacaaac gggaaagctg
     6241 gtggttgacg gttctgactg cttttggaac cagtattgat tccatgatag tcggggtggg
     6301 cttggcgttt atggaggtaa acatcgcctt tgccgccgca atcatcggta tggcgacgac
     6361 ggtgctggtg gcggtcgggc tgacggtggg aagggctttg ggcgtattgt tcggcaggcg
     6421 tgcggaattt gccggaggtt tggtgttgat tgccatcggt acatggacgc tcttgtcgca
     6481 cttggggctg atcgggtaag gactgccaaa aaatgctgtc tgaagcgttg tttgaccgtt
     6541 tcagacggca ttttttattt tttgggcgta gggcgaatcc gtaaggtggg atgtaaggtg
     6601 ggatgtaggg tgggcttcag cccaccctac gcccactgtt tttgattttt tgtttttgcg
     6661 ggaatgacgg gattttggct tactgttttt gtgaaaatgg cgaaaccgcg caaatgctga
     6721 tgccgtctga aacactgttt gattgtttca gacggcattt tttgttcaca tcgatcaagc
     6781 cgcgttgtcg aaaccgctgt ggcgcaagag tgcgtctatg ctcggttcgc ggccgcggaa
     6841 ggctttgaag gattctgccg cgctgcgcga tccgccgacg gcgaggattt cctgccaaaa
     6901 gcgtttgcct gtggcggcga catcgtcgct ttcttcaaag gcggcgtatg cgtccgcgct
     6961 caatacttcc gcccacgcgt agctgtaata gcctgcggaa tagccgcctg cgaagatgtg
     7021 gccgaagctc aaggcgaagc ggttgtattc gggcggctgg atgacggcga cttttttgcg
     7081 cacgctgtct aaaacctgtt gccagttttt cagacggcct tcgtcgtctt cgctgtaaat
     7141 catcatatca aagagggcga actccatttg ccggacgagg aacatgccgc gttggaagtt
     7201 tttggcggcg agcattttgt cgaagagttc tttcggcagg ggaacgccgg tttcttcgtg
     7261 ggctgacatt tgtgccaaga cattgtattc ccaaacgaaa ttttccataa actggctggg
     7321 cagttcgacc gcgtcccatt ctacgccgtt gatgccggat acgcccagtt cgtccacttg
     7381 ggtaagcagg tggtgcagcc cgtgtccggt ttcgtggaag aggatgagga tttcgtcgtg
     7441 gctcaggcgg gcttccctgc cgccgacggg tggggcgaag ttgcagacga ggtaggcggt
     7501 gggcagttgc agcgtgccgt ctgaaaaacg gcggcggcct ttgtagtcgt tcatccacgc
     7561 gccgccgcgc ttgccttcgc gggcgtagag gtccatatag acgccgccta tggttttgcc
     7621 gttttgttgc aattcaaaat agcgcacgtc tttgtgccag acggggacgg ttttttcggt
     7681 aaatccgatg ccgtagagtt ttttgatttg ggcgaacagt ccgtttaata ctttgccgac
     7741 ggggaagtat tttttgactt cggtttcgct gaacgcgtat ttggcttcgc gcagtttttc
     7801 gctggcgtag cccaagtccc acggttgcaa atcggcgagg ccgaggcttt cgcgggcgaa
     7861 ggctttgact tcggcgaggt ctttttcggc gtagggtttg gcgcggcggg cgaggtcgtg
     7921 caggaagttt aaaacttgtt cgggggtgtc cgccattttg gttgccagcg acaattcggc
     7981 gtagtttttg aagccgagca gtttggcggt ttgcagggcg tttgcgagcg tgcggtcgat
     8041 gttggcggtg ttgtcgaatt tgccgtcgtc tgacagttcg ctggcgcggg taacgtaggc
     8101 gcggtagatt tgttcgcgca gttcgcggtt gtcggcgtat tggatgacgg cgaggtagtg
     8161 tggaatctgc aagccgattt tgtagcctgt tttgctttcg ctttgcgcgg cggcggcaaa
     8221 catggcgagc gcgtcttcgg gaatgccggc aagcggtgcg gcatcgtcaa agtaaatgcc
     8281 gaacgcgtcg gtcgcgtcta ggacgttttg ggagaatttg gcggaaagtt gcgcgccttc
     8341 ggtttgcagt tttgccagtt ctgcctgctg ttcgggcggc agttccgcgc cgctgaggac
     8401 gaaatcgcgc agatcgtggt tgagtttggt tttttgtgcg ggggagaggg tgtcgaattc
     8461 gggggaattt ttgatggttt tgaagcggtt gtacagctcg atgtcttgtc cgatttcggt
     8521 gaagaagacg gtgatttcgg gcatcagttc gttatagacg gcgcgcagtt cgggcgtgtc
     8581 ggcgacggag ttgaggtgcg acaccacgcc ccaaatcctg ccgacgcgtt cggtgatgcc
     8641 ggtcaggggt tcgacagtgt ttgcccagcc ggtgtgcgtt tgggctttga tggcggcgat
     8701 ttgttcgcgc gcttcggcga tggcggtttg cagggcgggt ttgatgtctt cggttttgat
     8761 ttgatcaaaa cggggttctt cgcccaaatg gagcagtgcg ttgtcagtca taagatgggt
     8821 ttcctttgcg tgttgtgctt cagacagcat atcggcaata tgccgtctga agccggaaat
     8881 ggggtcggtc ggggaaagtt aaagtgtttc ggagccggcg gggtaattta acaggcggta
     8941 ttgtacgcgc aaaaattcgt ccataaccgc ctgttggatt tccagccgct ttgaaacggg
     9001 ggaggcgaag cggacgatga tgcggtatgc cttgtcatcg tacggcacgc gggtaacgcg
     9061 cggtctggcg gcgggcgtga taaacagttt ttccgcctgc acgttttcca aatgccgttg
     9121 gatggcgggg atgtagggcg cgcacaaggg ctcgagtacg gctttcagac ggcatacggc
     9181 ttcatccgaa tccaaatgga tggggacggg gatttcgacc gtatggatga catagtcgcc
     9241 caaaatattg tcgcggcgca cggggtggct caacaacagg ctgttgggga aagaaacggt
     9301 ggttcccgca agctgtccga ccaaggggtt cggaccgacc tgcatcatca gcgtgttcaa
     9361 caggttgatg tcgaccacgc gcccgcgcag gccgttgatt tcgatatagt cgccgaccga
     9421 gtattgctgg gtggcagacc ttaaaatact gcccgacaga cacataatca gttccttcgt
     9481 cgccacgacg accgccgccg ccaccgcaaa catcgacaaa gccagcgttt ggatttgcgc
     9541 cgaccagata aatgccagcg aaaacagcac caaaagcagc gttatattgc ggctggcaac
     9601 caaaaaccgc cgcttgcttt cgatgccgaa atccggatgc cgtttgaagt ggatattcaa
     9661 cagaagggcg cgcgccagca gcaaagccgc aaccgccgcc acggattcga ccgcctccgc
     9721 acgtatcggg acggcaccga gccaagtgtc caacctattc catatttcca tttccgcgcc
     9781 cctgtccgaa aagtataggg tgtagatttt agtggcaaaa aaacgctttt gccactttac
     9841 gggaaaatcc ccgacctgat gccggaggca aacgtaccgt ttcatctttt cccggcggca
     9901 cactgatgcg gataacgctg aattaggcgg caaaatcggc tataatacac aattatatat
     9961 gccgtcccgc ccgctttttc cacaaggtgc ggacttgttt tggcggcatc gcaaaatctt
    10021 ttcaaaatcc ggcaaaaaat atgactgaac aaaaacacga agaatacggc gccgacagca
    10081 ttcaggtgct cgaaggcttg gaagcggtac gcaaacgccc cggcatgtac atcggcgaca
    10141 cgcaggacgg cagcggcctg caccatatgg tgttcgaagt attggacaac gccattgacg
    10201 aagcactcgc cggacattgc gacaaaatca cggtaacgat acacgccgac cattccgtca
    10261 gcgtcgccga caacgggcgc ggtatgccca ccggcatcca cccgaaagaa ggacgctccg
    10321 ccgccgaagt catcatgacc gtattgcacg cgggcggtaa attcgacaac aacagctaca
    10381 aaatctccgg cggcctgcac ggcgtgggcg tgtccgtcgt caacgcgctg tccgactggg
    10441 taacgctgac catctaccgc gacggcaaag aacacttcgt ccgcttcgtg cgcggcgaaa
    10501 ccgaagagcc gctgaacgtt gtcggcgatt ccgataaaaa aggcacgacc gtgcgcttcc
    10561 tcgccagtac ggaaaccttc ggcaacgtcg aatacagctt cgacatcctt gccaaacgca
    10621 tccgcgaact ttcgttcctg aacaacggcg tggacatcga attgaccgac gagcgcgacg
    10681 gcaaacacga aagcttcgcc ctttccggcg gcgtggctgg attcgtgcaa tacatgaacc
    10741 gcaaaaaaac gcccttgcac gaaaaaatct tctacgcgtt cggcgagaaa gacggcatga
    10801 gcgtcgaatg cgcaatgcaa tggaacgaca gctatcagga aagcgtgcag tgcttcacca
    10861 acaacatccc tcagcgcgac ggcggtacgc acctgaccgc gttgcgccaa gtgatgacgc
    10921 gcaccatcaa cagctacatc gaagccaacg aagtcgccaa aaaagccaaa gtggaaaccg
    10981 ccggcgacga tatgcgcgaa ggtttgacct gcgtgttgtc cgtcaaactg cccgacccca
    11041 aattttcgtc ccaaaccaaa gacaaactgg tttccggcga aatcggtccc gtcgtcaacg
    11101 aagtcatcag ccaagccctg accgacttcc tcgaagaaaa ccctgccgaa gccaaaatca
    11161 tcaccggcaa aatcgtcgat gccgcccgcg cgcgcgaagc cgcccgcaaa gcccgcgaaa
    11221 tcacccgccg caaaggcgta atggacggct tggggctacc cggcaaactc gccgactgcc
    11281 aagaaaaaga ccccgcattg tcagaacttt atttggtcga gggcgattct gcaggcggtt
    11341 ccgccatgca ggggcgcgac cgcaaattcc aagcgatttt gccgcttaag ggcaagattt
    11401 tgaacgtgga aaaggcgcgc tttgaaaaaa tgctcgccag tcaggaagtc gccgctttga
    11461 ttactgcgtt gggtgcaggt atcggcaagg aagaattcaa tgccgagaag ctgcgttacc
    11521 accgcatcat cattatgacc gatgccgatg tggacggcgc gcacatccgc accctgcttt
    11581 taaccttctt ctaccgccaa atgcccgagc tggtcgaacg cggctacatc tacattgccc
    11641 agccgccttt atacaaagcc aaatacggca aacaagaacg atatctcaaa gacgaattgg
    11701 aaaaagacca atggctgctc ggtttagcct tggaaaaagc caaaatcgtt tcagacagcc
    11761 gcaccatcga aggcgaagag cttgccaata ccgccaaaca attcctgttg gccaaaaccg
    11821 tcatcgaaca ggaaagccgc ttcgtagacg aactcgtcct gcgcgccatg ctacacgcgt
    11881 cgcccattga tttgacgtcg tctgaaaacg ccgataaagc cgttgccgaa ctttccggtc
    11941 tgcttgacga aaaagaagtc gccctcgaac gcatcgaagg tcatgaagga caccgattca
    12001 tcaaaatcac gcgcaagctg cacggcaacg tcatggtcag ctacatcgaa cccaagttcc
    12061 tcaacagcaa agcctaccaa accctcaccc aaaccgccgc cgcgctcaaa ggcatggtcg
    12121 gcgagggtgc caagctttac aaaggcgaaa acgggtacga cgcggacagc tttgaaaccg
    12181 ctttggacat cttgatgagc gttgcccaaa aaggtatgtc catccaacga tacaaaggct
    12241 tgggcgagat gaaccccgaa cagctgtggg aaaccacgat ggatcccgcc gtgcgccgcc
    12301 tgttgaaagt gcgcatcgaa gacgccatcg ccgccgacga agtgttcgtt acgctgatgg
    12361 gcgacgaggt cgagccgcgc cgtgccttta tcgaaaacaa cgcgctgatt gcccaaaata
    12421 tcgacgcata agtgccgttt taaaaaagga gacgggcatc gtgccgcgtc tccttttggt
    12481 ttgtcaaacg gaagccatgc cgtctgaaac cgcctttcgg agcaaaacca tgatcagcat
    12541 ttttga
//
LOCUS       DAXHKG010000056        12249 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.056, whole genome shotgun sequence.
ACCESSION   DAXHKG010000056 DAXHKG010000000
VERSION     DAXHKG010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12249
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.056"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..259
                     /locus_tag="ACFMWP_001156"
     CDS             <1..259
                     /locus_tag="ACFMWP_001156"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HFC5891763.1"
                     /translation="RHAPVSPMWIFSACSRGADPIGRPFAFVNILENLEIRSTLPLIA
                     NRPTFPQLWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            427..2202
                     /gene="ggt"
                     /locus_tag="ACFMWP_001157"
     CDS             427..2202
                     /gene="ggt"
                     /locus_tag="ACFMWP_001157"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HFC5891764.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSRLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            2265..2528
                     /locus_tag="ACFMWP_001158"
     CDS             2265..2528
                     /locus_tag="ACFMWP_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891765.1"
                     /translation="MSNQTKIQAIKQASEQIFAICETPNTALQAIHLILRHGGAGELS
                     WQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDALPLGSLVLT"
     gene            2683..3933
                     /gene="glyA"
                     /locus_tag="ACFMWP_001159"
     CDS             2683..3933
                     /gene="glyA"
                     /locus_tag="ACFMWP_001159"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HFC5891766.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLENVRKQITALCDKYPVYGA"
     gene            4024..4668
                     /locus_tag="ACFMWP_001160"
     CDS             4024..4668
                     /locus_tag="ACFMWP_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC5891767.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            4687..6597
                     /locus_tag="ACFMWP_001161"
     CDS             4687..6597
                     /locus_tag="ACFMWP_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC5891768.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIIQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKVQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELNPTYGRIRIGSKQEVAYFDQFRS
                     TLNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFHPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            6618..6983
                     /locus_tag="ACFMWP_001162"
     CDS             6618..6983
                     /locus_tag="ACFMWP_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891769.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            7094..8569
                     /gene="trpE"
                     /locus_tag="ACFMWP_001163"
     CDS             7094..8569
                     /gene="trpE"
                     /locus_tag="ACFMWP_001163"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HFC5891770.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVVDNLSGKIYLIVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSSLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIHAAQMVQEGLDK"
     gene            8566..9111
                     /locus_tag="ACFMWP_001164"
     CDS             8566..9111
                     /locus_tag="ACFMWP_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HFC5891771.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKSREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTQQTGIRANT
                     QTDFSKFKGCLEDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            9108..10244
                     /locus_tag="ACFMWP_001165"
     CDS             9108..10244
                     /locus_tag="ACFMWP_001165"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HFC5891772.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADCHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPGSDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHRGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTVDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            10291..10773
                     /locus_tag="ACFMWP_001166"
     CDS             10291..10773
                     /locus_tag="ACFMWP_001166"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC5891773.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            10879..11934
                     /locus_tag="ACFMWP_001167"
     CDS             10879..11934
                     /locus_tag="ACFMWP_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5891774.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDSFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            11931..12143
                     /locus_tag="ACFMWP_001168"
     CDS             11931..12143
                     /locus_tag="ACFMWP_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891775.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGALQGRITFLNHPF"
BASE COUNT         3374 a         3349 c         2789 g         2737 t
ORIGIN      
        1 aaggcacgcc ccagtttccc caatgtggat tttcagcgcg tgcagtagag gtgctgaccc
       61 aattggcaga ccctttgctt ttgttaatat cctagaaaac ctagaaattc gcagtactct
      121 accactcatc gccaatcggc caacctttcc acagctttgg gttaatggtg agttaatcgg
      181 tggtagtgat attatcctac aaatgtacca atcaggtgag ctaaaaccac tcattgaaga
      241 gcatagccca aaggtctgat tacttaatat cttaaaataa atatcaaaaa agactgctga
      301 tgacattagc ggtctttttt tgatggtcaa gattgatagt ttggattgaa ttatttagcc
      361 atattaaata caataatcag catgccttgt atgaatcatc aatcaaactc aggcgaagga
      421 gtgcttgtgg ctaaaacata tttattgact gcattgataa tgtctatgac aatctctgga
      481 tgtcaagtca tccatgccaa tcaaggtaag gttaatactc attctgctgt catcacaggt
      541 gcagacgctc acacgcctga acatgcaacg ggactgaccg aacaaaagca ggtgattgca
      601 agtgatttta tggtagcgtc agccaatcca ttagcaacac aagctggcta tgatatctta
      661 aagcaaggcg gtagcgctgc agatgcgatg gtggcggtgc agacgacact aagcttggta
      721 gagccacagt cgtcaggctt gggcggtggt gcatttgtgt tgtattggga taataccgcc
      781 aaaacattga ccacatttga tgggcgtgag acggcaccga tgcgtgcgac gccggaatta
      841 tttttggata aagatggtca accattgaaa tttatggaag cggtggtcgg tggtcgctcg
      901 gtgggtacgc ctgctatccc taaactgatg gagacgatac atcagcgata cggtgtattg
      961 ccttggggaa aattatttga tacgccgatc cgcttggcaa aacaaggctt tgaggtgtcg
     1021 ccaaggcttg ccatctcggt tgagcaaaat cagcagcatt tggcacgcta tccaaaaaca
     1081 gccgcttatt ttttgccgaa tggtgtgccg ctacaagcag gcagcttgct gaaaaattta
     1141 gaatttgctg acagtgttca ggcgttagca gctcaaggtg caaaagctct gcatactggt
     1201 aaatatgccc aaaatatcgt ttcagttgtc caaaatgcta aggataaccc cggtcaatta
     1261 tccttacaag atttatctga ttatcaagtg gtggaacgcc cgcctgtttg tgtgacttat
     1321 cgtatttatg aagtatgcgg tatgggtgca ccaagctcag gtgggattgc tgtgggtcag
     1381 attttgggga ttttaaatga attttcaccc aatcaggtgg ggtatgatgc tgaaggttta
     1441 cgtctcttgg gcgacgcttc taggcttgcg tttgcggatc gtgatgtata tttgggcgac
     1501 cctgattttg taccagtacc cattcgccag ttgatttcta aagactacct aaaacatcgc
     1561 agccggctgc ttgagcagtc ggataaggca ttgcctagcg tatctgcagg cgattttatt
     1621 catgagtggg tgtcctcaca agcgattgag ttaccttcta ccagtcatat atcaattgtg
     1681 gataaggcgg gcaatgtgct atcaatgacg acttccattg aaaatgcgtt tggctcaact
     1741 ttgatggcaa atggctacct gctgaataat gagctgacag actttagttt tgagccaata
     1801 aagcagggca aacaggtcgc caatcgtgtc gagcccggca agagaccacg ctcctcaatg
     1861 gcaccaacca tcgtatttaa agcaggcaag ccttatatgg caatcggctc cccaggtggt
     1921 agccgtatca ttggctatgt cgctaagacg attgtggcac atagtgactg gaatatggat
     1981 atccaagatg ccatcagtgc acccaattta ttaaatcgct ttggtagcta tgaactagaa
     2041 acgggtacaa ccgccctcca gtggcaacaa gcattaaatg atttgggcta taagactgac
     2101 gtgcgtgagc taaattcagg tgttcaagcc attattatcg agccaagcag gctggttggt
     2161 ggtgccgatc cacgccgaga aggtcgagtg atgggtgatt agaggtgaag cttgtatttt
     2221 gtgaatttga ccgcattaag ttaatattaa aataggggga aattgtgagt aatcaaacaa
     2281 aaatacaagc catcaagcaa gcttctgagc agatcttcgc aatttgtgag acgccaaaca
     2341 cagcattaca agccattcat ctgattttaa gacatggtgg ggcaggagag ttgtcttggc
     2401 aagtggtgta tcagcgggtt atggctgata aagatgtggt tggtgctggt tatttgattg
     2461 attttgcaca aactgccgaa aatttaccat ttgatgcatt gcctttgggt agccttgtac
     2521 taacataaag gtaatgagac gctaaaaacc agcatgttaa ataaattacc tgataatgcc
     2581 aaagaaaatt tacgcattat ggactatctg ccttaggttt tgaagtattt ttttatacaa
     2641 aaaacactca tgataccctg attacacaaa ggagccgaga acatgttttc aaaaagcgtt
     2701 accctcgcac aatatgaccc cgatttggca gcagccattg cccaagaaga ccaacgccag
     2761 caagaccacg tcgagctgat tgcctctgaa aactacgtca gctgcgccgt aatggaagcg
     2821 caaggttccc agctgaccaa caaatacgcc gaaggctacc ccggcaaacg ctactacggc
     2881 ggctgcgaat acgtcgatat tgtcgaacaa ttggcaatcg accgcgtcaa aaaactgttc
     2941 ggcgcgcaat acgccaacgt tcaaccgcac tccggctcgc aagccaacca agccgtgtac
     3001 gcttccgttt taaaaccggg cgacaccatt ttgggtatgt ctttggcgca cggcggccac
     3061 ctgacccacg gcgcgagcgt taatatttcc ggcaaactct acaatgccgt tacttatggt
     3121 ttggatgaaa acgaagtgct cgattatgcc gaagtggaac gcttggctct cgaacacaaa
     3181 cccaaaatga ttgtggcggg tgcgtctgcc tacgcgttgc aaatcgactg ggcaaaattc
     3241 cgcgaaatcg ccgataaagt cggcgcatac ctctttgtcg acatggcgca ctacgccgga
     3301 ctgattgccg gtggcgaata tcccaacccc gtgccattct gcgacttcgt gaccaccacc
     3361 acccacaaaa ccctacgcgg ccctcgcggc ggcgtgattc tgtgccgcga caatacccac
     3421 gaaaaagcac tgaactcttc catcttccca agcctgcaag gcggtccgct gatgcacgtc
     3481 atcgccgcca aagccgtagc gtttaaagaa gcgttgcaac ccgagttcaa acaatacgca
     3541 aaacaagtga aaatcaatgc tgccgccatg gcggaagaac tggtcaaacg cggtttgcgc
     3601 atcgtttccg gccgcaccga aagccacgtt ttcctcgtcg acctgcaacc gatgaaaatt
     3661 accggcaaag ccgccgaagc cgctttgggc aaagcgcaca tcaccgtcaa caaaaacgcc
     3721 attccgaacg atccggaaaa acccttcgtt acctccggca tccgcatcgg ctccgccgcc
     3781 atgaccacac gcggttttaa cgaagccgac gcacgcgtat tggcgaactt ggttgccgac
     3841 gtattgtcta accccgaaga cgaagcgaat ctggaaaacg tccgcaaaca gattaccgcc
     3901 ctctgcgaca aataccccgt ttacggcgcg taaacttttt taaaaacaaa tgccgtctga
     3961 aaatttcaga cggcattttt ccaatcggtt aaaatacgcg gtttgttttt ttaggaacgc
     4021 gccgtgcttg cctccgccat cgacttcatc ctccatatcg accaacacct gctcgcgctg
     4081 tcggcgcaat acggtgtgtg gatttatgcg attctgtttt tgattgtttt ttgcgaaacc
     4141 ggcctgattg ttacgccctt actgcccggc gattcgctgc tgtttgccgc cggcgggatt
     4201 gccgcgctgg gcggtatgga tattcatttg atggttgcat tattaagcct tgccgccata
     4261 ctcggcgacg cgctcaattt taccgtcggc aaatatttcg gcggcaggct gttcgccaac
     4321 cccgattcta aaatcttccg acgtgaatat ctcgataaaa cccaccgttt ttacgaaaaa
     4381 cacggcggca aaaccatcat cattgcccgt tttatgccca tcgtccgcac ctttgccccc
     4441 ttcgtcgccg gtatggggaa aatgcactat gccaaattta tccgctacaa catcatcggt
     4501 ggcttgttgt gggttatcct gttttcttac gcgggctatt tctttgccaa cttccccgtc
     4561 gtaaaaaaca atctgggctt ggtgatgggc ggcatcatta ttgtttccgt cctgccgggt
     4621 gcggttgaaa ttgcccgcgc caaacttgcg gtaaaatcca aacggtaact gttgagaatt
     4681 tgcatcatga atatattatc tgtagaaaac gcttcttttg ccatcggcca cgttgccttg
     4741 ctcgacaaaa cttcttttca actcgacagc ggcgaaaaag tcggcttgat cggacgcaac
     4801 ggcgcaggta agtcttcgtt tctgaaaatc ctcgccggcg tgcaaaagct cgacgacggg
     4861 cagattatca ttcaaaacaa cctcaaaatc gtttatgtac cgcaggaatc cttttttgat
     4921 aaggacgcaa ccgtatttga taccgttgcc gaaggtttgg gtgaaattcg cgatttattg
     4981 cgccgttacc accgcgtcgg ccatgagttg gaaaacggtt cgggtgaggc tttgttgaaa
     5041 gaactcaacg aattacaact tgaaatcgaa gcgaaggacg gctggaagct ggatgcggca
     5101 gtcaagcaga ctttggggga actcggtttg ccggaaaacg aaaaaatcgg caacctttcc
     5161 ggcggtcaga aaaagcgtgt cgccttggcg caggcttggg tgcagaagcc cgacgtattg
     5221 ctgctggacg aaccgaccaa ccatttggat atcgacgcga ttatttggct ggaaaatctg
     5281 ctcaaagcgt ttgaaggcag cttggttgtg attacccacg accgccgttt tttggacaat
     5341 atcgccacgc ggattgtcga actcgatcgc ggtattttgc gttcctatcc cggctcgttc
     5401 tccaaataca gcgaaaaaaa agtgcaggaa ttggcggttg aagcggaaca caaccgcctg
     5461 tttgacaaat tccacgcgca ggaagaagcg tggatacgca aaggcatcga agcgcgccgc
     5521 acccgcaacg aaggccgcgt gcgccgtttg gaagagctgc gccgccaacg cgccgaacgc
     5581 cgcaatgtgc agggacaggt caacttcaag ctcgacagcg gcgagaaaag cggcaaaatc
     5641 atcgccgaat tggaacatgc ctcgtttgcc tatggcgaca aagtcattat ggacaaattc
     5701 tccgcgattt tgcagcgcgg cgataaaatc ggtctaatcg gccccaacgg catcggcaaa
     5761 accacatttt taaaactgat tttaggcgaa ctcaacccga cttacggcag aatccgtatc
     5821 ggcagtaagc aggaagttgc ctatttcgac caattccgca gcacgttgaa cgaaaacgac
     5881 accgtgtttt acacgctcgg tcaaggcaac gattacgtcg aagtcggcgg caagaaaaaa
     5941 cacgtaatga gctatctgga agatttctta ttccatccag cccgcgcaca aagtcccgtt
     6001 tcatcgctct ccggcggcga acgcaaccgc cttttgctgg caaaactctt tacccgtcct
     6061 gctaatattt tgattttgga cgaaccgacc aacgacttgg atatcgatac ccaagagctg
     6121 cttgaagatt tgctgcgcga ttatcaaggc acggtattcc ttgtctcaca cgaccgtatg
     6181 ttcctcgata acgtgattac ccaaagcatt atttttgaag gaaatggaag gttaaaagaa
     6241 tatatcggcg gctatcagga ctacatcgac gcaaaatcac gcgaagcgaa gattcagacg
     6301 gaatccgcac ccaaaacagc cgatgccgaa ccggtgaaag aaaaacccaa agccaaccgc
     6361 acggtcaaac tgtcctacaa agaacagcgc gaactcgacg ccctgcccga cgaaatcgcc
     6421 gccttggaag ccgaacaggc agaaatcaac gcgcagcttt ccgatcccga aatcttcaaa
     6481 gattacgaaa aagccggcgc actgcaaagc cgcgccgaag aaatcgaaat gctgcttttg
     6541 gaaaagctgg aacgctggga gctgctggaa accaaacaga acggcaatgc cgtctgaaat
     6601 caaacaggaa gaaaaaaatg ttcaaacgac ctgaagaaat cattgtcctg atacttgccg
     6661 tcctctggat tgccggtacg tattttctcg ccgccctgtt tggagcggat gcttataccg
     6721 tgttaaaaat cactgccctt accctgcttt ggtctgccgc atcattcctc ctttggcaaa
     6781 aaaacctcag ccggcatatc tggccgctgc tgctcggctg cctgactgcc tgttggtggc
     6841 cgtatctgaa tcaatcggtc gcacccggtt ctttaccttg gtatgcatca tggacgttca
     6901 aaaccatctt agccctgatt cccgtaaccg caggttatct gtttaaatgg aaacaatacc
     6961 ggcagcgcaa aacaaagccg taagcccgtc cttttcagac ggcatctccg gtcagactgt
     7021 caacaattcc gataaaatgc tatactcgcg cccgttgccg cgccgtccga aaccgccctt
     7081 tgggaaagca gaaatgatca gcaaacaaga ataccaagcc caagccgctc aaggctacaa
     7141 ccgcatcccg ctcgtgcaag aactccttgc cgatttggat acgccgcttt ccctctatct
     7201 caaactcgcc aaccgcccct atacctacct gctcgaatcc gttgtcggtg gcgaacgttt
     7261 cggccgctat tcttttatcg gcctgccttg cagccactat ctcaaagcca gcggcaaaca
     7321 cgtcgatgtt tatcaaaacg gcgaaattgt cgagcaacac gacggcaacc ccctgccctt
     7381 tatcgaagcc ttccacaacc gcttcaaaac acccgaaatc ccaagcctgc cgcgctttac
     7441 cggcggactg gtcggctact tcggttacga aaccatctac aattttgaac acttcgccca
     7501 ccgcctgaaa aacaccacca aagccgaccc gctcggcacg cccgacatcc tcctgatgct
     7561 ctcgcaagag cttgcagtag tggataacct aagcggtaaa atctacctga ttgtttacgc
     7621 cgatccgtcg cagcccgacg gctacgaacg cgcacgcgaa cgcctcgaag acatccgtac
     7681 acagttacgc caaagttgcg ccatcccgct ttcgctcggc agcaaacaca ccgaagccgt
     7741 cagcgaattc ggcgaagagc cgttcaaagc ctgcgttaac aaaatcaaag actacatctt
     7801 tgcaggcgac tgcatgcagg ttgtccccag ccagcgcatg agcatggaat tcaccgacag
     7861 ctcgctcgcc ctctaccgcg ccttgcgcac gctcaaccct tcgccttatc tcttctacta
     7921 cgatttcggc gatttccaca tcgtcggctc ctcgcccgaa atcctcgtcc gccgcgaacg
     7981 cgacgatgtc atcgtccgcc ccatcgccgg cacgcgcctg cgcggcaaaa cccccgccga
     8041 agaccttgcc aacgaacaag atttgttaag cgatgccaaa gaaatcgccg aacacgtcat
     8101 gttgattgac ttaggacgca acgacgtcgg ccgcatcagt aaaaccggcg aagtcaaagt
     8161 taccgacaaa atggtgattg aaaaatactc ccatgtaatg cacatcgttt ccaacgtcga
     8221 aggccgtctg aaagacggca tgaccaacat ggacatcctc gccgctacct tccctgccgg
     8281 cacactctcc ggcgcaccca aagtccgcgc catggaaatc atcgaagaag tcgaaccaag
     8341 caaacgcggc atctacggcg gtgccgtcgg cgtatggggt ttcaacaacg acatggattt
     8401 ggcaatcgcc atccgcaccg ccgtagtaaa aaacaacacg ctatacgtcc aaagcggcgc
     8461 gggcgtggtt gccgactccg atccggcctc cgaatggcag gaaacacaaa acaaagcccg
     8521 agccgtcata cacgccgcgc agatggtgca ggaagggttg gataaatgac ttatgaaaaa
     8581 ctttatgagc ttcgccaaac actcagaccg actaccaaag acggtctcta tacagataat
     8641 gaaaaaagtc gagaaatcct aacggttaga tggagcggca acacagaaaa tcctaaaaat
     8701 ttctcagctg ttgctatagg aattaatcca agtaaagcaa atgatgaaag aagcgacaaa
     8761 acccttaccc aacttgcacg tttcttggat atgtacggtt ttaccaactt caaaatgtta
     8821 aatatttttt ccagttactc tacacagcaa acaggaatta gggcaaacac ccaaaccgat
     8881 ttttccaaat ttaaaggatg tttggaagat gctgatatga ttattcttgc atggggtaca
     8941 gaccgcggtg cttataagga tgaaaaaaac agaatactgg aatttctaaa agcagaaaaa
     9001 tttatggaaa aagtattctg tatttctgaa actggtaatt ccagcgatac aagacatccg
     9061 tcaagaatta gttatagcta tcaacttgta caatttgaag agtcagcatg aaaaacatat
     9121 ctctttctcc gcccgccatg cttggcatcc tcggcggcgg acaattaggc agaatgttta
     9181 ccgttgccgc caaaaccatg ggctacaaag taaccgttct cgaccccgat ccggacgcgc
     9241 cggcagcaga atttgccgac tgtcatttat gcgcgccgtt taacgaccaa gctgctttgg
     9301 acgaattggc aaaatgcgcg gcggtgacca ctgaatttga aaacgtcaat gccgatgcga
     9361 tgcgttttct cgccaaacac accaatgttt cccccggcag cgactgcgtt gccatcgcgc
     9421 aaaaccgcat tcaggaaaag gcatggatac gcaaagcagg attgcaaacc gcgccgtatc
     9481 aagcaatttg caaagccgaa gacatcactg aagaaagcat acaatttctg cccggcatcc
     9541 tgaaaaccgc tacattgggc tatgacggca aaggccaaat ccgcgtcaaa acggtggatg
     9601 aactcaaagc cgcgtttgcc gaacaccgcg gcgtggattg cgttttggaa aaaatggtgg
     9661 acttgcgcgg cgaaatttcc gttatcgtat gccgtctgaa caatgacaac gtgcaaactt
     9721 tcgatcctgc cgaaaacatt cacgaaaacg gtatcctcgc ctactccatc gtcccagccc
     9781 gactgagtgc cgacattcag caacaggcgc gacaaatggc gcagcgtttg gccgatgaat
     9841 tgaactacgt cggcgtattg gcggtagaaa tgtttgttgt cggcgacacg catgaattgg
     9901 tcgtcaacga aatcgcgccg cgtccgcaca attccggcca ccataccgtc gacgcctgcg
     9961 cggcagacca attccagcaa caggtccgcc tgatgtgcaa cctgccacct gctgacacca
    10021 aattgctgag ttcttgctgt atggcgaata ttttgggcga cgtttggcag gaagacggcg
    10081 gcgaaccgga ttggtttccc ctgcaaagcc ggccggacgc gcacctgcac ctttacggca
    10141 aaaaaaccgc gcacaaaggg cggaaaatgg gacactttac cgttttaacc accgattcgg
    10201 acaccgcatt tcaagaagca aaaaaactgc atcagtccct ataatccgac caacggcaca
    10261 gatgccgtct gaagccgccg acatactgcc atgaacctgc tgacactgtt acgccccgcc
    10321 accgtgcaag actgcaaaga catcttcaaa gtccacctgc actccgtcca atacacctgc
    10381 atcctcagct acaacgaaca cgccctaaaa gtatgggaag gcttgttaaa cacagaaagc
    10441 tacctgccga ccatttccga tcccgacaaa gcactttggg ttgccgaata caaaggcaac
    10501 atacagggat ttttccaaat cgactgccaa gaagcacaac tcgatgcact ttacgtccac
    10561 cccctgttcc acaacctcgg actgggcact gccctgcttc atcaggcgga aaccatcgcc
    10621 cacaaatccg gtttgagctt tctgaaactc tacgcatcgc tcaactccgt cccgttttac
    10681 cttctcaacc gctacgaatc gctcggttcg gcagtattgc agcttgaccc cagcatcaaa
    10741 atcaaatgcg aactgatgcg gaaacacctc tgatccgtcc ttataaccaa aactgataat
    10801 cttcaaatca aacattattt ccacaagcgc agacagccgt ataaagttgc cccatctacc
    10861 aaccgacagg acaagcatat gaaaacctac gcaccggcac tctataccgc agccctgctc
    10921 accgcctgca gccccgcagc cgattcaaac catccgtccg gacaaaatgc cccggccaat
    10981 accgaatccg acggaaaaaa cattaccctg ctcaacgcct catacgatgt ggcacgggat
    11041 ttttacaaag aatacaaccc cttatttatc aaaacatacc aatccgaaca ccccggcaca
    11101 tccgtcagca tccaacagtc ccacggcggc tccagcaaac aggcattatc cgtagccaac
    11161 ggccttcaag ccgatgtcgt aaccatgaac caatcctccg acatcgacct gctcgaaaaa
    11221 aaaggactgg tagaaaaagg ctggcaacaa gccctccccg accacgctgc gccctacacc
    11281 agcactatgg ttttccttgt ccgaaaaaac aaccccaaac agatccgcga ttggaacgac
    11341 cttgccaaag acggcgttaa catcgtcatc gccaatccca aaacctcggg caacggacgc
    11401 tacgccttcc tcggcgcata cggttacggt ctgaaaacca ccaacggcaa cgaacaggaa
    11461 gcccaaaaac tcgtcgcatc catcctcaaa aacacccccg tttttgaaaa cggcggacgc
    11521 gccgccacca ccaccttcac acaacgcaac atcggcgacg tactcattac ttttgaaaac
    11581 gaagccaact acgtcagcaa aaaactgacc caaggacagt ttgaaatcgt ctatccgagc
    11641 tacaccattt ccgccgaaag ccccgtcgcc gtcgtcaaca gcgtcgtcgc gaaaaaaggc
    11701 acgcaaaaaa ccgcccgcgc ctatctcgaa tacctttgga gcgaaccggc gcaagaactc
    11761 gccgcctcac tctacctgcg cccccgcaac cccgaagtat tggcaagaca caaagccgac
    11821 ttcccagact tagactcatt ctctcccgaa gaaaaattcg gcggatggga caacatcatg
    11881 aaaacctact tcgccgacgg cggcatattc gaccgcctga ccgcacaaaa atgaccgcta
    11941 tgccgtctga accgcctttc agacggcatt ccacacatca aaacagaaaa accgcgccca
    12001 aaatcatcat cacaagacac aacggcaaac cggatacaaa acccaacacc gccgccaaaa
    12061 tgccgtctga agccgtcggc gcaaccatcc ttatctgggg cgcgcttcag gggcgcataa
    12121 ctttccttaa ccatcccttt tgacagccaa ataaacagtg cttttgcctg tcagaaacaa
    12181 aaccaatatt ttgcagttcg tatcggaaca tttatagtgg attaacaaaa accagtacag
    12241 cgttctcgc
//
LOCUS       DAXHKG010000057        11973 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.057, whole genome shotgun sequence.
ACCESSION   DAXHKG010000057 DAXHKG010000000
VERSION     DAXHKG010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11973)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11973)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11973
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.057"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            97..813
                     /locus_tag="ACFMWP_001169"
     CDS             97..813
                     /locus_tag="ACFMWP_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HFC5891776.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            962..1864
                     /locus_tag="ACFMWP_001170"
     CDS             962..1864
                     /locus_tag="ACFMWP_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HFC5891777.1"
                     /translation="MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1907..2680
                     /locus_tag="ACFMWP_001171"
     CDS             1907..2680
                     /locus_tag="ACFMWP_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HFC5891778.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEAGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVVSELVRRRGSLRVITNNIHAASIASARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2792..4480
                     /locus_tag="ACFMWP_001172"
     CDS             2792..4480
                     /locus_tag="ACFMWP_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HFC5891779.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4573..5529
                     /gene="gshB"
                     /locus_tag="ACFMWP_001173"
     CDS             4573..5529
                     /gene="gshB"
                     /locus_tag="ACFMWP_001173"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HFC5891780.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMRLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
     gene            5841..6224
                     /locus_tag="ACFMWP_001174"
     CDS             5841..6224
                     /locus_tag="ACFMWP_001174"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HFC5891781.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            6339..6812
                     /locus_tag="ACFMWP_001175"
     CDS             6339..6812
                     /locus_tag="ACFMWP_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HFC5891782.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMSAMDHGHHHGEAHQH"
     gene            6938..8041
                     /gene="mnmA"
                     /locus_tag="ACFMWP_001176"
     CDS             6938..8041
                     /gene="mnmA"
                     /locus_tag="ACFMWP_001176"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HFC5891783.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            8112..9782
                     /locus_tag="ACFMWP_001177"
     CDS             8112..9782
                     /locus_tag="ACFMWP_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HFC5891784.1"
                     /translation="MEKIWLDSYEKGVSAEIDITQYNSISDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGTTAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRINVFIGVNTLFNAMVNRPDFAEVDFSELRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLIVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVRKDPS
                     LTKEELIAFCRTELTAYKVPKDIEFRDELPKSNVGKILRRELRQSTGK"
     gene            9894..11528
                     /locus_tag="ACFMWP_001178"
     CDS             9894..11528
                     /locus_tag="ACFMWP_001178"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HFC5891785.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            11777..>11973
                     /locus_tag="ACFMWP_001179"
     CDS             11777..>11973
                     /locus_tag="ACFMWP_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5891786.1"
                     /translation="MIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTRYLRDHRGRPAY
                     PLLSMFKAVLLGQWHSLSDPEL"
BASE COUNT         2963 a         3248 c         3159 g         2603 t
ORIGIN      
        1 atttgtgcaa tgctttaatt cctctgacac gatttgaaac acagccgcct taaaacatct
       61 taaaaaattt gaaagcgtaa aaatacggaa aacatcatga actttgaaaa cgacgacatt
      121 atccatgcgc cgaccacgtc ttccctgatt ctcgaagagc ggcacgattc ggagctgttc
      181 cgtgtttacg ccctgatttt ggacggcatt accgatcagg tgctgctgcc cggcaaaaag
      241 ctgaccgaat ccgaactttg ccgtcagatg gtgtgttcgc gcaacaccgt ccgcggcgcg
      301 ctgtcgcttt tggcgcacga caagattgtc gatttgcaac ccaacagggg cgcgttcgtc
      361 cacgttcccg atttgaaaga aatgcaggat gtgttcaatg cgcgcatcga aatggagacg
      421 atgattttga atatcctcgc agatttgccg gatttggaaa cgcgcctcaa gccgctttat
      481 gcgatgataa ggcgcgaaga agaggcttcc ggcaggggcg accgcgtcgg ctggaaccgc
      541 ctgtccaatg ccttccacgt cgaactggcg cgcctggtgg gcaacgatgt gctgttcgac
      601 attatgaaca cgctgtgcgc gcggtcttcc ctgattgtcg ccgtggcggg cgtgcatcgc
      661 gaggaaaaac acgccatcaa tacgcatacg cattccgaac accgcgaaat cctcgacctg
      721 ctgctggcgg gcaggcgcaa ccgcgtggtc aaaatcctgc gccgccattt gggcaactgt
      781 atggaacgct tggaaaagac tttggaagat tgaatgccgg agcggataag ccgcctgaac
      841 cttcaggcgg ttttttaatg gcgaacctga tgccgtctga aatatggatg cgggtatctg
      901 caattttcag acggcaattt ttaaaccgca tatatcatgc ggcaataaag gaggtcagga
      961 gatggacagc ctgatgacat tgctttcggt attggtaccg atgttcgccg gattttttat
     1021 ccgtgtgccc aagccttacc tgcccgcttt ggacaaggtg ctgtcggttt tggtgtatgc
     1081 cgtgctgctg ctgatcggcg tatcgttgtc gcgcgtggag gatttgggtt cgcggttgga
     1141 cgatatggcg ttgacggttc tgtggctgtt tgtttgtacg gtcggggcga acctgcttgc
     1201 tttggcagtg ttgggaaagt tattcccgtg gcggataaag gggaaaggga agggcgtttc
     1261 ggtcggcgtg tcgggcagtg tggggcagct cggatgcgtg ctgctcggat ttgcattcgg
     1321 caaactgatg cgcgatattt ggatgccgtc tgaaagcgcg ggcatgtatt gtctgatgct
     1381 gctggtgttc ctcatcggcg tacagctcaa aagcagcggc gtatcgttgc ggcaggtttt
     1441 ggtcaaccgc aggggtattc ggttgtcggt ctggtttatg ctttcatctc tttcgggcgg
     1501 gctgctgttt gccgcatcga cagacggtgt gtcgtggacg aaaggtttgg cgatggcttc
     1561 cggcttcggt tggtattccc tctcgggttt ggtcatgacc gaggcttacg gcgcggtatg
     1621 gggcagcatc atgctgctga acgatttggc acgagagctg tttgcactgg catttatccc
     1681 gctgctgatg aagcgttttc cggatgcggc ggtgggggtt ggcggtgcga ccagtatgga
     1741 ttttacattg cccgtgattc agggtgcggg cggtttggaa gtcgtgccgg tagcggtcag
     1801 cttcggcgtg gtggtcaata ttgccgcccc gtttctgatg gtggtgtttt ccacgctggg
     1861 ctgaacacgg taaaatcggc atcccgatgc aaggaggcag aaaacgatga aaccgaaaat
     1921 ccaaaggcac ggagagattt taagccttgt ccgccggcat cagtttatgt cggtggacga
     1981 gcttgccgcc gcattggacg ttaccccgca gacgatacgc cgcgacatcc gcgagttgga
     2041 ggaggccggc agcctgaaac gccatcacgg cggcgcatct tcgggcggaa acttgccgga
     2101 gggcctgccc gccgaccgcc aaacccggtg tcaaaacgaa aaaaacgcca ttgcccggct
     2161 gattgcggaa cacatccccg acggttcgtc gctgtttgtc agtatcggca cgacgatgga
     2221 ggccgtggtg tcggagctgg tcaggcggcg cggcagcctg agggtgatta ccaacaatat
     2281 ccacgccgcc tcgattgctt cggcgcggac ggattatacg gtcattatca cttctggagt
     2341 cgtccgtcct ttggacggcg gtattaccgg cgtggcaacc gtcgatttta tcaaccagtt
     2401 caaagtcgat tatgccgtga tgagtacgca cggcgtggaa agcgacggtt cgcttttgga
     2461 cgacgactac aaagaagtca gcgtgatgca ggcgatgatt gccaatgcgc gcgtccgctt
     2521 cctcggcgtg gaccacagta aattccgcag caacgcgctg gtcaggctcg gcgacattac
     2581 ggcgtttgac aaagtattta ccgaccggct gcccgatacc gcgatgcaga agatgctgaa
     2641 agaggcgggg gtggaatgcc tgattgccga tgccgtctga acgctatgtc aaagcgcgca
     2701 agtcgggtac aataaacaca tcatcaaacc gcttcagacg gcataaggaa ccgccccaat
     2761 gccgtctgaa gccatctgtt caaagaaaac tatgctcaat aaagaccaat ttgcggacaa
     2821 ccattttatc cgcaccttca tcgaagaaga cctcaaaagc ggcaaacacg aaaccatcca
     2881 aacccgtttt ccgccggagc ccaacggcta cctgcacatc ggacacgcca aatccatctg
     2941 cctgaacttc ggtttggcgt atatttacga cggcttgtgc aacctgcgtt ttgacgatac
     3001 caaccccgaa aaagaaaacg acgaatacgt caacgccatc aaagaagacg ttgagtggct
     3061 cggtttccat tgggcgggcg agccgcgttt cgcttccaac tatttcgacc agctttatga
     3121 ctacgccgtc ggtttggtta aagacggcaa agcgtatgtc gatgatttga cgccagaaga
     3181 aatgcgcgaa taccgcggta cgctgaccga agcaggcaaa aacagccctt atcgcgaccg
     3241 cagtatcgaa gaaaacctcg acctgttcac gcgcatgaaa aacggtgagt tccccgacgg
     3301 cagcaaaacc ctgcgcctga aaatcgacat ggcatccggc aacatcaata tgcgcgatcc
     3361 ggtcatctac cgcatccgcc gcgcccatca ccacaacacc ggcgacaaat ggtgcatcta
     3421 tccgatgtac gactacacgc attgtatttc cgatgccatc gaaggcatca cgcattcctt
     3481 gtgtacgctc gaatttgaag cccatcgtcc gctgtatgac tgggtgttgg acaacatccc
     3541 cgcgccgcac gccacacgtc cgcgccaata cgagttttca cgcttggagc ttttgtacac
     3601 cattacctcc aaacggaaat tgaatcagtt ggttgtggaa aaacacgttt ccggctggga
     3661 cgatccgcgt atgccgacca tttccggtat gcgccgacgc ggctacacgc ccgaagggct
     3721 gcgcctgttt gccaaacgcg ccggtatttc caaatctgaa aacatcgtcg atatgagcgt
     3781 gttggaaggc gcgattcgcg aagagttgga aaattccgcc ccacgcctga tggcggtgtt
     3841 gaacccgctc aaagtgaccc tgaccaactt tgaaaccggc agaacccaaa gccgccgtgc
     3901 cgcgttccat ccgaaccacg aggaaatggg cgagcgcgaa gtacctattt cacaaaccat
     3961 ctatattgaa gccgacgact ttgccgaaaa tccgcccaaa ggcttcaaac gcctgattcc
     4021 cggcggcgaa gtacgcttgc gccacggcta tgtcatcaag tgcgatgaag tcgtcaaaga
     4081 cgaagcaggc aatgtggttg aactcaaatg cagcatcgac cacgacacct tgggcaaaaa
     4141 tccagaaggc cgtaaagtta aaggcgtgat tcattgggtt tccgccgaac acgccgccga
     4201 aatcaaagtc cgtctgtacg accgcctctt taccgtcgag cgtcccgatg ccgtgcgcgg
     4261 cgaagacggc gaatacctgc cgttcaccga tttcctcaat ccggaatccg tcaaggaaat
     4321 caccgcctac gccgaacctg ccgccaaaga tttgccggca gaaagccgtt ggcagttcga
     4381 gcgtatcggc tacttcgtaa ccgaccgtaa agaccacggc aaagacacgc cggtgtttaa
     4441 ccgcacggtc acgctgaaag attcttggca gcctaagtaa aaccccatcc ttgccgtctg
     4501 aatattgttc ggacggcatt tcccctttgc ccgcgaaatg cggcacattc ggcacaccgg
     4561 aaaggaaata tgatgaaagt cctctttatc gccgacccga tggcaagttt caaaacctac
     4621 aaagacacca cctacgccat gatgcgcgag atggcaaaac gcggttggcg gctgtttcat
     4681 accttgagcg gggaattgtc ggttaaaaac ggtctggtgg ttgctgatgc gtctgctttt
     4741 gagtttctcg gcgcacaaga cgaccacgac aaaaactggt ttgccgccgc cgacaaagtt
     4801 cagacggcat tgaaagcatt tgatgccgtg attatgcgta ccgatccgcc gttcgatatg
     4861 caatacctct acgccacaca gcttctgacg ctggcggagc agcagggcgc gaaggtcttt
     4921 aacagcggac aggcgatgcg tgatttcaat gaaaaactgg cgattttgaa cttcagccgc
     4981 tttaccgcgc ccacgctggt aacgacccgt tccgccgatg tccgcgcatt tttgaaagaa
     5041 cacggcgaca tcatcattaa accgctggac ggtatgggcg gtatgggtat tttccgcctg
     5101 accgaaaaag atcccaacat cggcagcatc ctcgaaaccc tgatgcggct tgattcccgc
     5161 accattatgg cgcaacgcta cattcccgaa atcgtacacg gtgacaaacg catcctgatt
     5221 atcggcggcg aagtcgtccc ctatgctttg gcgcgtatcc cgcaaaacgg cgaaacacgc
     5281 ggcaaccttg cggcaggcgg acgcggcgtg gcgcaggaat tggacggacg cgaccgcgaa
     5341 attgccgaaa cgctcgcccc cgaactcaaa cggcgcggca tcctgctggc cggtttggac
     5401 gttatcggca gcaacctgac cgaagtcaac gtaaccagcc cgaccggatt ccaagaaatt
     5461 atgaaacaaa aaggtttcga cgtggcggca atgtttgccg atgccgttgc cgcgtggtcg
     5521 gtacgttaaa ccgatgccgt ttgaaaggct tttgcttcac aaccgtttgg tttgttcggg
     5581 caggcagggt tttccctcag ccggcaggga tgcggttaat gccgtacgga caccccgccg
     5641 ccccgttttc agacggtata tatagtggat taacaaaaat caggacaagg cggcgaagct
     5701 gcagacagta caaatagtac ggaaccgatt cactcggtgc ttcagcacct tagagaatcg
     5761 ttctctttga gctaaggcgg ggcaacgccg tacaggtttt tgttaatcca ctatattgag
     5821 aacattttga aaggataccg atggaacctt cctcctacgc ggcagaaaaa aaaggcaaag
     5881 gcggcatcag gcgcgtcatt aacgcattcg gctattcgat agacggcatc gccgccgcct
     5941 accgttacga agcggcattc cgtcaggttt tgtggctgaa cgtactgctg gtgtgcgcgg
     6001 catttttttg ggtttccgaa accgccgtcc gcctgccgtt gattatcgcg tcttttgtgt
     6061 cggtcattgt cgaactgttc aacaccgccg tcgaagctgc cgtcgatcat acttcgaccg
     6121 aaaaacacga gctggccaaa cgcgccaaag acgcaggttc tgccgcacaa ttgttcgcga
     6181 tgctgatgtt ggcggcggtt tggctgtctg ccctgttcgg gtaaaacgct tgcagcagga
     6241 tttgtaatcc tttaggatta gtatgtggta tttattattc acttaatcca ctataagatt
     6301 aagcacattc cccgtctgat attataagga gcagaaagat gaaaaaatta ttggcggccg
     6361 tgatgatggc aggtttggca ggcgcggttt ccgccgccgg agtccacgtt gaggacggct
     6421 gggcgcgcac caccgtcgaa ggtatgaaaa taggcggcgc gttcatgaaa atccacaacg
     6481 acgaagccaa acaagacttt ttgctcggcg gaagcagccc cgttgccgac cgcgtcgaag
     6541 tgcataccca catcaacgac aacggcgtga tgcggatgcg cgaagtcaaa ggcggcgtgc
     6601 ctttggaggc gaaatccgtt accgaactca agcccggcag ctatcacgtg atgtttatgg
     6661 gtttgaaaaa acaattaaaa gagggcgaca agattcccgt taccctgaaa tttaaaaacg
     6721 ccaaagcgca aaccgtccaa ctggaagtca aaatcgcgcc gatgtcggca atggaccacg
     6781 gtcatcacca cggcgaagcg catcagcact aatctgctga aaatatttga aatgccgtct
     6841 gaaaaagccc gggctttcag acggcatttt tatgaccgcc tttaaaatgt gttaaaatct
     6901 gcctttaaaa accgccgttt ccaaccatat tctacgcatg aatacgacag caaacccttc
     6961 caatatcatc gtcgggctct ccggcggtgt cgattcttcc gtaaccgccg ccctgctcaa
     7021 gcagcagggt tatcaagtgc gcggtgtgtt catgcagaac tgggaagacg acgacaacga
     7081 cgaatattgc agcatcaaac aggattcgtt cgatgccatc gccgttgccg atattatcgg
     7141 catcgacatc gacatcgtta atttcgccgc gcaatataaa gacaaagtct ttgcttattt
     7201 tcttcaggaa tacagtgcgg ggcgcacgcc gaatcccgat gtgttgtgca acgccgaaat
     7261 caaattcaaa tgctttttgg attacgccgt agggcagggc gcggatacca tcgccaccgg
     7321 acactatgcg cgcaaagaag tccgcaacgg cgtgcattac ctgctcaaag gtttggatcg
     7381 aaacaaagac caaagctatt tcctctaccg cctcaagcct ttccaactcg agcgcgcgat
     7441 ttttccgttg ggcggtttgg aaaaacctga agtccgccgc cttgccgccg aatttaattt
     7501 gccgaccgcc gccaaaaaag acagcacggg catctgcttc atcggcgaac gcccgtttcg
     7561 cgagtttctg caaaaatacc tgccgaccga caacggtaaa atggttacgc ccgaagggaa
     7621 aaccgtcggc gaacacgtcg ggctgatgtt ctacacgctc ggacagcgca aaggtttggg
     7681 catcggcggc gcgggcgaac cgtggtttgt tgcggctaaa gatttgacga aaaacgaact
     7741 gattgtcgtg caaggacacg accatccgct gctctatacc cgcagccttg tgatgaacga
     7801 tttgagtttc acgctgcccg aacgcccgaa ggcaggacgc tatacctgca aaacgcgtta
     7861 ccgtatggcg gacgcgcctt gtgagttgcg ctatttggat gaagaaaccg ccgagctggt
     7921 gtttgacgaa ccgcaatggg cggttacgcc gggccagtct gccgtgctgt acgacggcga
     7981 tatctgtttg ggcggcggca tcatccaaac gaccgacaaa cccgtcatca tcacgcgata
     8041 aaggtaatgc cgtctgaaac ggttttcaga cggcattgtt ccgctcaatt ccactttaaa
     8101 gaccgatacc tatggaaaaa atctggttag acagttacga gaagggcgtc agtgccgaaa
     8161 tcgatatcac gcaatacaat tccatcagcg atgtattccg ccaaagcgtg gaaaaatttg
     8221 ccaggctgcc cgcttttcaa aatatgggca aaacgctgac ttatgccgaa accggcaaac
     8281 tggcgactga tttcgcctct tatctgcaaa acgtcctcaa gctgccgcgc ggcgaacgtg
     8341 ttgccattat gatgccgaac gtattgcaat acccgatagc ccttttcggc attttgcagg
     8401 caggtttggt ggcggtgaac accaatccgc tctatacgcc gcgcgagctg gagcatcagc
     8461 tgaaagacag cggcacgacc gccatcatcg ttttggaaaa tttcgccaac acgctggagc
     8521 tggtgctgcc gcgcacgcag atcaaacatg tcatcgtcgc ctccgtcggc gaaatgttcg
     8581 ggctgcttaa aggttcgctg atcaatttca tcatccgaaa aatcaagaaa atggttcccg
     8641 aataccgtat tcgggaaacc gtttcctttc agacggcatt gaaagagggg gcgaagcacg
     8701 ttttccaacc tgtcgcatta aaccgcgaag ataccgcgct gttgcaatac acgggcggca
     8761 cgacaggtgt tgccaaaggg gcggtgctga gtcacggcaa catctgtgcc aatatgcttc
     8821 aggcaaaaga atggattaaa aaccagttgc gcgagggcaa agaaaccgtt atcgctgccc
     8881 tgccgctgta ccatattttc gccttaaccg tgaatctgat gatttttgcc aatgccggct
     8941 caaaaatcat cctgattacc aacccgcgtg atatgaaagg ctttatcgga gaactgaaaa
     9001 aacagcggat taatgtattt atcggcgtaa acacactgtt taacgcgatg gttaaccgtc
     9061 ctgattttgc cgaagtcgat ttttcagaat tgcggctgac tttgggcggc ggtatggcga
     9121 cccaaaaagc cgttgccgaa aaatggaaaa aaattaccgg tacgcctatt gtcgaagcct
     9181 acggtctgac cgaagccagc ccaggcgtgt gctgcaaccc cttaaacatc gaatcataca
     9241 gcggcagcat cggtttgccc gtctcgtcca ccgaagtcga actgcgcgac gcaaacggca
     9301 aagaagtccc cgtcgggcag ccgggcgaat tgtgggtaaa aggccctcaa gtgatgcaag
     9361 gctactggaa ccgtcccgaa gaaaccgcta aagccataga cgcgcgcggt ttcttggaaa
     9421 ccggcgatat tgccgtcatg gacgaaaaag gctggttgaa gctggttgac cgtaagaaag
     9481 acctcattgt tgtttccgga ttcaatgttt atccgaacga aatcgaagaa gtcatcgcgc
     9541 atcacggcaa agtgatggaa gttgcctgta tcggcgttcc cgacgaaaaa accggcgagg
     9601 cactcaaagt attcgtcgtc agaaaagacc cgtctttgac gaaagaagaa cttatcgcct
     9661 tttgccgcac cgaattaacc gcatataaag taccgaaaga tatcgaattc cgcgacgagt
     9721 tgcccaagtc caacgtcggc aaaatcctgc gccgcgagtt gcggcaaagt accgggaaat
     9781 aaagaaaaga tgccgtctga aaacagccgt ccaccgttca gacggcatcc gtccgtttgc
     9841 cagaaccgcg cgcttcacgt taaaatcacg cattccaata tgggtattcc atcatgacca
     9901 aattcatttt cgtaaccggc ggcgttgtct cctcactggg taaaggtatc gccgccgctt
     9961 ctattgccgc catcctcgaa tcgcgcggct tgaacgttac catgctcaag ctcgatcctt
    10021 atatcaacgt cgatcccggc acgatgagcc cgttccaaca cggcgaagtg ttcgtaaccg
    10081 acgacggcgc ggaaaccgac ctcgacttgg gacactacga acgctttatc gattccacga
    10141 tgacccgccg caacagcttc agcacggggc aggtgtacga aaacgtcatc gccaaagaac
    10201 gacggggcga ctatttgggc ggcacggttc aagtcattcc gcacattacc gacgaaatca
    10261 aacgccgcat ccacgaaggc gcggcaggtt acgatgtggc gattgtcgaa atcggcggta
    10321 cagtcggcga tatcgaatct ttgccattct tggaagccat ccgccagatg cgaagccagt
    10381 tgggacgcaa caacaccctg ttcgcccact tgagctacgt cccctacatc gccgctgcag
    10441 gcgaaatcaa aaccaagccg acccagcaca ccgttaaaga aatgttgagc atcggtttgc
    10501 aacccgacat cctgatttgc cgtatggaca ggacaatgcc tgcggacgaa cgccgcaaaa
    10561 tcgccttgtt ctgcaacgtg gaagaacgcg cgattgtcgg cagctacgat gtggacagca
    10621 tctacgaatg ccccgaaatg ctgcacgacc aaggcatcga caacatcatt accgagcagt
    10681 tgcagcttaa tgtgcagcag gcggatttga ccgcgtggaa aaaaatcgtc cacgccatcc
    10741 aaaacccgaa acacaccgtc aaaatcgcca tggtcggcaa atacgtcgat ttgaccgagt
    10801 cctacaaatc gctgatcgaa gccttgaaac acgcaggcat tcacaccgaa accgacgtac
    10861 aaattacctt tgttgacagc gaaagcatcg agaaaaacaa cggcgacgtt tccatgctta
    10921 aagacatgga tgccatcctc gttcccggcg gttttggttc gcgcggcgtg gaaggcaaaa
    10981 tcgccgctgt gcgctatgcc cgcgaaaaca acgtgccata cttgggcatc tgcctcggta
    11041 tgcagattgc gctgatcgaa tacgcccgcg acgtggcagg tttgaaaggt gcgaattcca
    11101 ccgagttcga cctcaaatgc gccgcccccg tcgttgccct gattgacgaa tggcaaactg
    11161 ccgacggcag cgtcgaaacc cgcgacgaat ccgccgattt gggcggcacc atgcgtttgg
    11221 gcgcgcaaga agtcgaattg aaagcaggca gcctcgccgc caaaatctac ggcagcgaac
    11281 acatccgcga acgccaccgc caccgctacg aagtcaacaa caactacgtt cctacgctgg
    11341 aacaggcagg tttggtcatc ggcggcgtat ccgccggacg cgaacgcttg gtcgaaacca
    11401 tcgaactgcc gaaccatcct tggttcttcg cctgccagtt ccaccccgag tttacctcca
    11461 atccgcgcaa agggcatcct ttgttcaccg cgtttgtcaa agctgcgttg aacaataaaa
    11521 aagcctgata aagcgttact tgatgatcaa aatgccgtct gaaagcctga atgaagactt
    11581 tcagacggca tttttgcaaa tcggggatca taaaagccat caatttaatt tttatggttt
    11641 tatctaatat tgaccaactg aatattgtta agcggggcgt gaaactcaag ttgagacctt
    11701 tgcaaaattc cccaaaatcc cctaaattcc caccaagaca tttaggagca ccttcttccg
    11761 gcaaaccgcc caagccatga ttgccaaaca catcgaccgt ttcccgctat tgaagttgga
    11821 ccgggtgatt gattggcagc cgatcgaaca atacctgaac cgtcaaaaaa cccgttacct
    11881 tagagaccac cgcggccgtc ccgcctaccc gctgttgtcc atgttcaaag ccgtcctgct
    11941 cggacaatgg cacagcctct ccgatcccga act
//
LOCUS       DAXHKG010000058        11692 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.058, whole genome shotgun sequence.
ACCESSION   DAXHKG010000058 DAXHKG010000000
VERSION     DAXHKG010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.058"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            356..1660
                     /locus_tag="ACFMWP_001180"
     CDS             356..1660
                     /locus_tag="ACFMWP_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HFC5891787.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
     gene            complement(1905..3200)
                     /locus_tag="ACFMWP_001181"
     CDS             complement(1905..3200)
                     /locus_tag="ACFMWP_001181"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HFC5891788.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAIRSQHWEELQQWHEHAQKYYGATHYQL
                     WDNTELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGTKIFEHSPMIRIEP
                     YQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFQPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     DDVKIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(3326..4213)
                     /locus_tag="ACFMWP_001182"
     CDS             complement(3326..4213)
                     /locus_tag="ACFMWP_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC5891789.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(4213..5178)
                     /locus_tag="ACFMWP_001183"
     CDS             complement(4213..5178)
                     /locus_tag="ACFMWP_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC5891790.1"
                     /translation="MNLNKLKNKLFRRPGQRVVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNITISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(5194..6318)
                     /gene="potA"
                     /locus_tag="ACFMWP_001184"
     CDS             complement(5194..6318)
                     /gene="potA"
                     /locus_tag="ACFMWP_001184"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HFC5891791.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(6514..6621)
                     /locus_tag="ACFMWP_001185"
                     /pseudo
     CDS             complement(6514..6621)
                     /locus_tag="ACFMWP_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(6700..6969)
                     /gene="rpsO"
                     /locus_tag="ACFMWP_001186"
     CDS             complement(6700..6969)
                     /gene="rpsO"
                     /locus_tag="ACFMWP_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HFC5891792.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(7192..8127)
                     /gene="secF"
                     /locus_tag="ACFMWP_001187"
     CDS             complement(7192..8127)
                     /gene="secF"
                     /locus_tag="ACFMWP_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HFC5891793.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTKGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(8131..9984)
                     /gene="secD"
                     /locus_tag="ACFMWP_001188"
     CDS             complement(8131..9984)
                     /gene="secD"
                     /locus_tag="ACFMWP_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HFC5891794.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALQNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRVGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(10196..10462)
                     /gene="yajC"
                     /locus_tag="ACFMWP_001189"
     CDS             complement(10196..10462)
                     /gene="yajC"
                     /locus_tag="ACFMWP_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HFC5891795.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            10590..>11692
                     /locus_tag="ACFMWP_001190"
     CDS             10590..>11692
                     /locus_tag="ACFMWP_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HFC5891796.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2914 a         3051 c         2984 g         2743 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cggcagggct tgcgtccctc ccggacaagc
      301 cccgaccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggga tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggcatcct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgcgta tttttaagcg ggatgcagat agacgctgcc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggagcgcatt gggtgtgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtcg ggcgcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggt tcgttatggc ggcatacagc gggctgatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggcgaacg cgtggaataa gggcggttat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga taaacatata
     1741 gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaga tagtacggaa
     1801 ccgattcact tggtgcttga gcaccttaga gaatcgttct ctttgagcta aggcgaggca
     1861 acgccgtact ggtttttgtt aatccactat actgcctgcg acgcttaacg gctgtctttc
     1921 cactgataat atttcgagcc gaggaaagaa ccgagtttgc gcaaaaacgg ttgcaggata
     1981 atattcggct ggcgcaaccg ctcaaacggc ttcagacggc attcgtcccc taaaattgct
     2041 tcggcaaccg ccagacctgc aatgcctgtt atcgccatcc cgtgtccgga ataaccttgt
     2101 gcataaaaaa catttgcggc caaacgtccg aaatgcggga caaggttggc ggtaatgtcg
     2161 cactccccgc cccacgaata ttcgattttg acatcgtcaa gctgcggaaa aactttaagc
     2221 atatcttggc ggacaagctc ggtcatacgc gcaggattgt cgataaactc gttatcctta
     2281 ccgccgaaaa gcagtctgcc gtccgcgctg aggcggtaat aatccaaaat atggcggttg
     2341 tcgcatactg ccatattgtt acggataagc ccttttgcgc gcgcccccaa gggttcggtc
     2401 gcaataataa aggtgctaac ggcaatcgcc ttgcgttcca aaggctggaa tatcgggttc
     2461 aaacctgcat aggtattgac ggcatacacc agatttttgc attcgacgct gccttcgggg
     2521 gtgtaaacca gccaaccgtt ttgataaggt tcaatgcgta tcatgggaga atgctcaaaa
     2581 atcttcgtac cagcttcggc agcggcgcgg gcgatgccca acgtgtaatt gagcggatgg
     2641 agatgcccgg acaagggatc gaactgtgcg ccttggtaca tatcgctgtc aagctgctgc
     2701 ttcagttcag tgttatccca gagttgataa tgagttgcac cgtaatattt ttgggcgtgc
     2761 tcatgccatt gttgcaattc ttcccaatgc tgcgaacgga tggcaaccgt ggcataaccg
     2821 cgctgccaat cgcaatcaat ggcatgtttg cggacgcgtt cgtccaccag ttcgaccgcc
     2881 tgcaaagact gttgccaaaa ccattgcgct tgctccaaac cgacctgttt ttcaatttcc
     2941 tccataccgc aggcgtaatc gctgataacc tgcccgccac tccgtcccga cgcgccgaaa
     3001 ccgatacgcg cggcttccaa cacaaccgtt tcatgtccct gctccgccaa gggcaatgca
     3061 gtgcacaaac cactcaatcc gccgccgatg atacaggtat cggttttcag acggcattga
     3121 agtttcggat aaacagtatg aggattaacc gaactgaaat aataagaagg cagatattct
     3181 tgaaaatcag ggcgaatcat tgtgtttgct ttatcgggta tattttcgga cggaatgata
     3241 caggctgtcg agccatatcg tccaaacaga aaatcggttg aagaaaacag gctgacccag
     3301 tcatgcggtc agcctgcctt attaattaat ttgctttctc ggcagccaat ttttcttggc
     3361 ggtaggcttc tgccgcttct cggtcacgct tggttgcctg cctcatcatc caataattga
     3421 cgatgatgac caatgttccg atgatgccga tcaggatggt tgccaaaacg ttcatctgcg
     3481 gatcaagacc cagcttgatt ttggagaaaa tcacctgcgg caatgtggat gaaccggggc
     3541 cggagaggaa tgaggtaatc accaaatcat ccaaagacag ggtaatgccg agcagaaagc
     3601 ctgaagcgat ggcaggggca atcaaaggca aagtgatgac aaaaaagatt ttcagcggac
     3661 gcgcgcccaa atccattgcg gcttcttcga gcgattggtc aagctcaacc agacgcgaac
     3721 ggataacaac ggtaatgtat gccatgcaca gcgtcgtatg tcctaagaaa atagtgaaaa
     3781 agccacgatc gaagtagaga tgttgtaacc attcgctgcc ctgcaaaaat atctgtacct
     3841 gaataatcag cagcagcata gacagaccgg taatcacgtc gggcatcacc ataggtgcgg
     3901 aaatcatacc ggcgaacaag gtactgccgc gaaaacgttt aatccgcgcc atcgcatagc
     3961 ctgccagcgt gcccaaaacg acggcggcaa gcgaagacac aacggcaatc cgcagcgaca
     4021 gccaagcggc ttccaagatg gtgtcgtttt ccagcaatgc gccgtaccac ttggtcgaaa
     4081 agccgcccca aacggttacc agcttggatt cgttaaacga atagatgacc aaaacaacca
     4141 gcgggatata cagaaacgcc agcgacagtg ccaacatcag tttcaagaac caagataatt
     4201 tggatttctg cattatttgg ctccttcttc caattcgcgg ttttcataat gctgaaacag
     4261 ggcaatcggc acgaccagca gcgcgaccat cacgacggcg acggcggaag ccagcggcca
     4321 gttgttttga tcgaagaacg cctgccacaa gactttacca atcatcaggt tttccgaacc
     4381 gccgaccagc tcgggaatga cgaactcgcc gacagcaggg acgaaaacca gcatggagcc
     4441 tgcaataatg ccggttttcg acaaaggcag ggtaatcgtc aagaacgatt tgaccggccc
     4501 cgcgcccaaa tcggaagccg cttcaagcag gcggttgtcg agtttcacca gttgcgtgta
     4561 tagcggcaga atcataaacg gcagataggc gtaaaccatc accaaattga gcgaaaaggc
     4621 attgtagaac aaatccaaag gctcgctgat aatacccatt ttaatcaaca ggttgtttac
     4681 aataccgtta tgcccgagca gacccatcca cgcatagacg cgcaacagga acgatgtcca
     4741 aaagggcagc ataatggcaa gcagcaaacc attgcggaca gaaggattgg cacgagaaat
     4801 cgcataggcg gtcggataac cgaccaacag gcaaatcact gtcgtcatca atgcggtttt
     4861 gattgaagac cagtaggtca tcagatagat attgctgttt tcactgtcgc cgaacgggtt
     4921 aagggtatgc caaaaatttt ggaaaatatc ggcatagttt tgataactga tggtgatatt
     4981 cagacgacct aaatcttcgt cgatgctggt cagcggcgta aacggcggaa tggcgatttc
     5041 ttgttcggca aagctgattt tcagcacgat ggcgaacgga atcagaaaca gcaccaaaag
     5101 ccaaatatac ggtacggcaa tcaccacacg ctgccccggg cggcggaaca gtttgttttt
     5161 cagtttatta aggttcattg cattcccctt aaatcaacgg aacagtggcg taggctggtt
     5221 ttccggccag ctgatataca cggtttcgtc ccaagttggc ggtgtaatgt tgcgtacata
     5281 ccagtaaggt gcaggaactt ggcttttgac gacgcgcccg ttggcgagtt tgatatggta
     5341 tatggcaaag ctgcccaaat aggcgatttc ttttaccgtg cctttcgccc agttgtagtc
     5401 gcccaaatat tcgggttttt ctttatataa atcaatatcc tctggtcgaa tactaaccca
     5461 aaggtcctgc tcgctcggac cacccaaacc gtgatcgatg cggacgtggt tttccaaacc
     5521 ttcgcattcg ataacggcat agtcggcatg atcttcaatc accacaccgt caaagatgtt
     5581 ggtttcgccg ataaactcgg cagtgaagcg gctgttggga tagtcgtaca cgtcgctggg
     5641 tgtgccgact tgctgcaact gaccgtcaga cataatggcg atgcgggtcg ccatcgtcat
     5701 cgcctcttct tggtcgtgcg taaccataat acaggttacg ccgacttgtt ccagcgtatt
     5761 gaccaactca agctgggttt gttggcgcag ttttttgtcc aatgcaccga ggggctcatc
     5821 cagcagtaga attttcggac gttttgccag actgcgtgcc aaagcaatgc gctgctgctg
     5881 accaccagaa agctggtgag gtttgcgttt ggcaaatttg gtcatctgaa ccaggcggag
     5941 catttcttcg acgcgcgcgg cgatttcgcc tttaggcatt ttgtcctgtt tcagaccaaa
     6001 ggcaatgttt tgttctacgg tcatatgcgg aaaaagcgcg taactttgga acatcatatt
     6061 gatggggcgg tcatagggtg caagtttggt aatatcctga ccatcaagga taattttccc
     6121 ctgattgggg ctttccatac ccgccagcat acgcagcagc gtggattttc cgctgccgga
     6181 actgcccaaa agggcgaaga tttcgtgttg ataaatgtcc aagtcgatgt tatcgacagc
     6241 gtaattgtca ccaaactttt tcaccaagcc ttggatttgc agataaggtt tggctgaaga
     6301 cgcagtggtt gcggtcataa tggcaatact ccaataaaaa aacgagtacc ggcaaaacgg
     6361 attttcgaat gggtgataaa aagctgtttg attgctggcg ggagtcgcaa cgtctgatgc
     6421 cgtctgaaac tcttgtgaag cgcacgggca gcatgaaatg gaacaagatt ccaaagaact
     6481 ttatattata ttagtttatg cggttttcgg gcaatatagt ggattaaatt taaaccagta
     6541 cagcgttgcc ttgccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg
     6601 atttaaattt aatccactat aaatatggat ttgagcttgt cggaaagcaa cagaaaagaa
     6661 aacaccgccc atttttctgg gcggtgtcgg aaagcgtaat tatttacgca gacccaagcg
     6721 ggtaatcaac gcgcgatacg tatcgggctg ggtacggcgc aagtaggcca gcaggcggcg
     6781 gcgttggctg accattttca acaggccgcg acggctgtgg tggtctttgg ggttggcttt
     6841 gaagtggggg gtcaggtcgt tgatgcggaa agtcaacaga gcgacttgta cttcggaaga
     6901 gccggtgtcg ccttctttgc gttggaaatc tttaacgatt tgtgcttttt gttctacggt
     6961 cagtgccata atgaaaactc caaaaatata agaatcccca tagggattca gacaagtttg
     7021 ccaagcctga agacaacggc aaactcccta tgcccaagat aggacaacgt ggcattatga
     7081 cacaattccc gcatttctgc acaatatttt aagaccgtgg aagtaaccgt taaaaatgcc
     7141 gtctgaagca ttgtctgctt gagacggcaa tgttcagacg gcatatgcgc ttcaaaccac
     7201 gatttcttct ttcttcttcg gttctttacc gatattgtcg cggctcaaac cgaacattag
     7261 cagaagcggg ctggcaacca atacggaaga ataaatgccg aacacgatgc caatggtcaa
     7321 cgccatagaa aagccgtgca aggccgcacc gccgaacacc agcatagaaa caaccatcgc
     7381 ctcggtcgaa ccgtgggtaa tgatggtgcg gctcatcgtt gcggtaatcg cgttgtcgat
     7441 gacttccggc acggcatgtc cgcgcatcgc cggcttgcgg aagttttcac ggatacggtc
     7501 gaagacgacg acggattcgt tcacagaata gcccaatacg gcaaggatac ccgccaagac
     7561 ggtcagcgaa aattcccatt ggaagaaggc aaagcagccg agaataatca cgatgtcgtg
     7621 catattggcg ataatggcag atacggcaaa acgccattca aaacgcatcg acaggtaaat
     7681 aatgatgccg ataacgacaa aacctaaagc catcaatcca ttacttacca attcctcacc
     7741 gacttgcggg ccgataaatt cgacttggcg caaggtaacg tcgggactgt cttttttcag
     7801 caaatccata acctgattgg acaactgtgc ggaagtaaca ccttctttgt tcggcaggcg
     7861 gatcatgatg tgtttgttcg tacccaatgc ctgaacctgt acatcaccta ttttcagcgt
     7921 atcgaggcgt tcgcgcatct tattgacatc cgcaccctgc tgatattgga cttccattac
     7981 cgtaccgccg gtaaattcga cagagaaatt caggcctttg gtcaccaaga agaacacggc
     8041 agcgataaac gtaaccaacg aaatgaaggt cgtcagtttg ccgtagctca taaacggaat
     8101 atcgcgtttg attttaaaga gttccatagc ttactcctta cctgccgcag tttcggcttc
     8161 aggtttccat accgcaccga tggaaatatt ctgcaatttg cgtctgcgtc cgtaccacag
     8221 attgaccaac gcacggaata cgacgacgga cgaatacatc gaagtcagaa tacccaaaca
     8281 gtgtacgacc gcaaaaccgc gtaccgggcc ggaaccgaat accaaaagcg cgataccggc
     8341 aatcagcgaa gtcaggttgg aatcgacaat ggtcgcccat gcgtgttgga aaccgagatt
     8401 gattgcctgc tgcggcggca cgccgacacg caattcttcg cggatacgtt cgttaatcaa
     8461 gacgttggag tcgattgcca tacccaaagt caacgccagc gcggccatac ccggtaacgt
     8521 caacgttgcc tgcatagcag acaaaatacc gattaggaac agtatgttgg cactcaatgc
     8581 aatggtagaa aagaaaccca tcagacgata gtaaaccacc atgaatgcag caacgatggc
     8641 aaaaccccat aaagtcgaat ggaagccttt ttcgatgttc tccttaccca aagacggacc
     8701 gatggtacgt tcttcgacaa tctgcatcgg cgcggcaaga gaaccggcac gcaacagcaa
     8761 agacgtatca ttggcttcgg ctgtcgtcat gcttccggaa atttccacgc gtccgccggt
     8821 aatggcagta cggataaccg gcgcggttac aacctcggat tttccttggt cgatcaaaac
     8881 catcgccatg cgtttgccga catttgcggc agtcagttcg ccgaaaatgc tgccgcccgc
     8941 gctgtccaag ctcagactga cggcaggtgc gcccatttgg tcgaaactcg gttgcgcatc
     9001 gttgatgttg tcgcccgtca gctcgacctg tttgctgatt agcagagttt cgggacgatc
     9061 tccgccgctt gaaagcagct cataaccgct cggcacgttg ccttccaatg cctcgcgcaa
     9121 cttggcagga tcgtcctcca ccatacgcaa ttccaaagtc gcggtacggc cgatgatgtc
     9181 ttttgccttg gcagtatcct gaacgcccgg aagctgcacg acgatacggt ctgcacctga
     9241 ctgctggatg acgggttcgg ccacgcccaa ctcgttcaca cggttgtgca gggtagtgat
     9301 gttctgtttg accgcatcgg aacgcacttt attaaccgcc tcttccgaaa gcgtcaagac
     9361 gatattgctg ccgtctgaat tcagcgttgc ttcaggaaac agcttgcgca actgcggcag
     9421 tgccttttgc acatcacctg catcctgcaa agggacggtc aggctgtttc cagcctgacg
     9481 caccgtgccg ctgcggattt tttcgcggcg cagttcgcgg cggatgtcgc ccgaataacg
     9541 ttcaaacgtt ttctgcatcg ccgctttcat atcgacctgc atggtgaaat gcacgccgcc
     9601 gcgcaagtcc aaacccaaaa acatcggatt ggctttgatt ttcgccatcc attcggggct
     9661 gtccgccaac aggttgagcg cggtaatata cccttcgccc aaagtgtttt cgatgacgtc
     9721 gcgcgcttta agctgcgttt cggtgtcttt gaaacgcact ttcagtgaat tgtccacaac
     9781 aaacatcccg tcggtctgaa tacccgcgtt ttgcagcgcg gcatccactt tggattgagt
     9841 ctgttcgttg atgatgatgg cttgtcggtt ggtcgatacc tgcacggcgg gtgtttcgcc
     9901 gaataggttg ggcagcgaat acactgcggc aaccgcaatc gtgaacacaa tcagcagata
     9961 tttccataaa ggataacggt tcatcattgt tccttaatgg ttggaacccc accctttcgg
    10021 tggtgtcgga atcgggctat ttcagaagag gcaaaaaccc ttcccagcca ggcaagaccg
    10081 gaaggcggca tcttgaatat gccgccctgc gtgtcggaac atggtcaagc cttcggttgg
    10141 aattcaaaac aaagtgccgc attcgggctt tccagatgcg gcttgtcggc acaaatcaat
    10201 cgacttttgc ggcaatcgca ttgcgttcta cttcgacctc gatttttgta ccctgtccga
    10261 tatccacggt aaaaaactgt tcgccgactc tggttacctt acccttgaaa cctgccgcca
    10321 agaccacttt gtcgccgact ttcaaggcgg caagcattgc ctgatgcgct ttgaatttct
    10381 tttgctgcgg acgcatgatc aggaagtaga acaccaccat aatcaacact aaaggagcaa
    10441 attgtgcaac agcttgattc ataatttatc cgttctttct aatatggttg aaaatcgaga
    10501 ggggtatata ataacataag accgtaaaca atatatcggg tttgccgtcc gtaccgaccg
    10561 tataccgcag cctgcccgtc cacaaaccca tgtccttgac ccgcctaatc ttgaaattct
    10621 atgcactgtt gcgccttttt ttgggcaaaa acgcccgcac cgcatggatt tcgcatcccg
    10681 cctgtgccgg gcacgaaccc ggcgcaaacc atcccgattc gcccgaccgc atcctctgca
    10741 tcgagcaggc attgcgccgc gccggtattt ggcagcacct ccaaaccata gaggcggaag
    10801 aaatcagcga tacgcgcctc gcacttgtcc actcgagcaa atatctgaac cgtttggaat
    10861 cttgcctgcc ccaaaaaggc aagattttcc gcctggataa cgacactgca atcagcacag
    10921 gctcgctgtc tgccgcacac tttgccgccg gttcggcagt tcaggcagtc gacatggtca
    10981 tgaaccgtaa agcatggcat gccttttgcg ccgcccgccc gcccggacac catgcgggca
    11041 gcggcaaagc cggcggattc tgcctgctga acaacgttgc cgccggcgtc atgcatgcca
    11101 ttgccgaata ccgcctgaaa cgcattgccg tcatcgattt cgatgtccac tacggcgacg
    11161 gtacggcaga aatattcaaa gacgatccgc gcatcctgtt tttcaacctg tttgaaaccg
    11221 accttttccc cttccccgaa aacaacgata tgcccgacgg cggcaatatg gtgcacctgc
    11281 ccttgccgcc gggaacgggc agccgcacat tccgcgaagc cgtccgcagg cagtggctgc
    11341 cccggcttgc cgcattcaaa cccgaactgg tgctgctgtc ggcaggattc gacgcacacc
    11401 gtctagacga atcgggcagg ctcaacctgc acgaggcgga ttttgcctgg ctgacacaca
    11461 aaatcattca gacggcatcg ggctgccccg gcaaaatcgt atccgtactc gaaggcggct
    11521 acacccttga acctctggca caatctgctg ccgagcatat ccgcgtgctg gcggggctgg
    11581 gcaaatccga tgccgcaacc gcctatcaga aaacactgga tccaacaaaa aaacggtttg
    11641 ccaaaccgaa aaccggacag gtgcgccaac ctacccaatc cgaccgttac ga
//
LOCUS       DAXHKG010000059        11533 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.059, whole genome shotgun sequence.
ACCESSION   DAXHKG010000059 DAXHKG010000000
VERSION     DAXHKG010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.059"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            121..543
                     /locus_tag="ACFMWP_001191"
     CDS             121..543
                     /locus_tag="ACFMWP_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HFC5891797.1"
                     /translation="MKKTFLSAVLLLSAATQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGWGRGRWATMKFQNGEFMYTVDAGFDSV
                     THAVGSGVLVERRGKEIARFDCTSKTAQANFDDDDFAW"
     gene            561..1322
                     /locus_tag="ACFMWP_001192"
     CDS             561..1322
                     /locus_tag="ACFMWP_001192"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HFC5891798.1"
                     /translation="METVKPIMLIVRPSGRAKDDVETCRRAEWQAEVLSPIEIETDKA
                     SLKRLPEMYARADAVFWVSPTAVETAVPYLNLSDGIKMHISVGQGSRRALERCLGRTV
                     IAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSAELVQSLFAQVPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            1397..2671
                     /locus_tag="ACFMWP_001193"
     CDS             1397..2671
                     /locus_tag="ACFMWP_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HFC5891799.1"
                     /translation="MPSETSSPRKENETEVHIPAAPFIVKQSGSNALAVCALVLAALG
                     LGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAALLKDNLNRQAAIQSELDRLD
                     GNVKANGEQILEMQKSYRELTKGRADWLVDETETILNLAAQQLVLTGNIQTAVGVLEH
                     IDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGTALRLDRLETAVSGLPLILDG
                     VLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRLENNDAMLISPEQAYFVRENL
                     RLRLLDARTALMQRNSEVYQGDLNNAEAAVRQYFDAKSPATQSWLKELAELKALDVRM
                     TADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPANENTASEPAAASDVKTIEAP
                     SLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            2668..3885
                     /locus_tag="ACFMWP_001194"
     CDS             2668..3885
                     /locus_tag="ACFMWP_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HFC5891800.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            3960..5024
                     /gene="hemE"
                     /locus_tag="ACFMWP_001195"
     CDS             3960..5024
                     /gene="hemE"
                     /locus_tag="ACFMWP_001195"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HFC5891801.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     MQHEADIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGNQVALQGNFDPSALFGTPESIRAEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            5202..6581
                     /gene="radA"
                     /locus_tag="ACFMWP_001196"
     CDS             5202..6581
                     /gene="radA"
                     /locus_tag="ACFMWP_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HFC5891802.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(6856..7335)
                     /locus_tag="ACFMWP_001197"
     CDS             complement(6856..7335)
                     /locus_tag="ACFMWP_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HFC5891803.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAAHRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(7467..7826)
                     /locus_tag="ACFMWP_001198"
     CDS             complement(7467..7826)
                     /locus_tag="ACFMWP_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC5891804.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPLAAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAKAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(7865..11479)
                     /gene="recB"
                     /locus_tag="ACFMWP_001199"
     CDS             complement(7865..11479)
                     /gene="recB"
                     /locus_tag="ACFMWP_001199"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HFC5891805.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQTDLPQARDAALASWQNICGNLAELKETFWRIHPLLNGNSYRKNSFAELF
                     DALEQKALSPDLPFLEAKLHERLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFRRD
                     LDALEEAEEATIIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRQTYDWEKDGIAMLKRNWRRLTDNAPAGTDFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICVIDYKSNHLGADASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         2521 a         3049 c         3417 g         2546 t
ORIGIN      
        1 tgccgcccta tgtgttgccc taatttggaa ggggttacac ccttttcaaa taaaatctga
       61 tgctgctgcc acgaaggacg gatgtccaag tggcggggtt ttaaccatta aggaaatacg
      121 atgaaaaaaa cgttcctttc tgccgtattg cttctgtcag ctgcgaccca aaccgtgtgg
      181 gcagatacgg tgttttcctg taaaacggac aacaacaaat atatagaagt tcaaaaaatt
      241 aaccgcaatc tttacgaata ttcgttcggc agtgcggcaa aaaaagaaat tgccatacgc
      301 aacagcaaag ctgatctgtt ggggcgttcc gacaggtggc aaggctgggg cagaggccgt
      361 tgggcgacga tgaaattcca aaacggcgaa tttatgtaca ccgtagatgc aggcttcgat
      421 tccgtgaccc atgcagtagg cagcggtgtc cttgtggagc gtaggggcaa ggaaatcgca
      481 cggttcgact gtacgtcgaa aaccgcgcag gcgaatttcg acgatgacga ttttgcctgg
      541 taatcggggc ggataaggcg atagaaacag tgaaacccat catgctgatt gtccgaccgt
      601 cgggcagggc gaaggacgat gtggaaacct gccgtcgtgc cgaatggcag gcggaagtgt
      661 tgagtccgat tgaaatcgaa accgacaaag caagcctgaa acggctgccg gaaatgtatg
      721 cccgtgcgga tgccgtgttt tgggtcagtc cgaccgccgt tgaaaccgcc gtcccgtacc
      781 ttaacctttc agacggcata aagatgcaca tttccgtagg gcagggcagc cgccgtgcat
      841 tggaacgctg tttgggcaga acggtcatcg cgcctgatga cggcaacgac agcgaggcgg
      901 ttttgcgcct gccggtttgg aacagtctgc ccgaaggtgc gcgcgtattg tttgtgcgcg
      961 gacacggcgg gcgggatttt ctgatgaatg ccttgcagga gaaaggtttt cggacggagg
     1021 tggcagaagt ctatttcaga cggcataaac ctttgaactt tcaaaatttc caaaccgaaa
     1081 atattgccgc cgcctatatt acgtccgcag aactcgtgca gtcgctgttt gcacaggttc
     1141 cgccgcaatt ttcccgattc ttcaaatcct tgctatactt tacccatcat ccgcgcattg
     1201 cggaggcatt gaagcgcgaa ggcgtgtgtt cggtcgaaac cgtccctacg ctggaagccg
     1261 cgctttccca ttcttccatt tccgtttcag acggcatggt ctttcccgga acctcaaatt
     1321 aataaggagc aaaacggtgg gcgaacctga aaacaaatca tccgaacccg tacgcgagat
     1381 acaggcatca aaagaaatgc cgtctgaaac ctcttcccca cgcaaagaaa acgaaacaga
     1441 agtacacatt cctgccgctc cttttatcgt caaacagtcc ggcagcaacg ctttggcagt
     1501 ctgcgccctg gtattggcgg cattgggttt gggtacaagt ggttttttgt ttgtccaggg
     1561 acagaatgtc ttgaaaaacc aagagctggc attcaaccaa aaaatcgaca aagccgcctt
     1621 gggcgagtcg gaaaacgccg ccctgttgaa agacaacctc aaccggcaag ccgccataca
     1681 atcagagctc gaccgtttgg acggaaacgt caaagcaaac ggcgaacaaa tcttggaaat
     1741 gcaaaaatcc tatcgcgagt tgaccaaagg acgcgccgat tggctggtgg acgaaaccga
     1801 gaccatactc aatctggcgg cgcaacagct ggtgttgacc ggcaatatcc aaacggcagt
     1861 cggcgtattg gagcatatcg acagccgcct gtcccgtttc gatcaggcag agcttctgcc
     1921 gatcaaacag gcagtcagca gcgacttggc ggaactgaaa aaccgtccct atgtcgatat
     1981 ttccggcacg gcattgcgcc tcgacaggct ggaaaccgcc gtatccggac tgccgctgat
     2041 tttggacggc gtattgaagc cgggcgtaca ggtgaagaac gaagccgctt ctgcttcatg
     2101 gtggcagaac gtatgggaaa aatccctcgg cacattgaag gggctggtcg aaatccgccg
     2161 tttggaaaac aacgatgcca tgctgatttc tcccgaacag gcatattttg tgcgtgaaaa
     2221 cctgcgcctc cgccttttgg atgcgcggac tgcattaatg cagcgcaaca gcgaagtcta
     2281 tcagggcgat ttgaacaatg ccgaagccgc cgtcagacag tatttcgatg ccaagtctcc
     2341 cgccacgcag tcgtggctga aagaactggc ggaattgaag gcgttggatg tgcgcatgac
     2401 ggcggatgac ggtttgaaaa acagcctaaa tgccgtccgc gcctatcgcg acggtacgcg
     2461 catgacggcg gcggaaaatc aagaagcaga acaggcggct tccgaaccgg caaacgaaaa
     2521 cacagcttcc gaaccggctg ccgcatcgga tgtgaagacc atagaagcac cgtccctgcc
     2581 ttcggaacgc aaaccggaac agcctgcaaa aaaacagccc gtaccggaaa aggcagggcg
     2641 ttcgccgtcc gctaaaggag aacgcgcatg aaaacggtag tctggattgt cgtcctgttt
     2701 gccgccgccg tcgggctggc attggcttcg ggcatttaca ccggcgacgt gtatatcgta
     2761 ctcggacaga ccatgctcag aatcaacctg cacgcctttg tgttaggttc gctgattgcc
     2821 gtcgtggtgt ggtatttcct gtttaaattc attatcggcg tattcaatat ccccgaaaag
     2881 atgcagcgtt tcggttcggc gcgtaaaggc cgcaaggccg cgcttgcctt gaacaaggcg
     2941 ggtttggcgt attttgaagg gcgttttgaa aaggcggaac tagaagcctc acgcgtgttg
     3001 gtcaacaaag aggccggaga caaccggact ttggcattga tgttgggcgc acatgccgcc
     3061 gggcagatgg aaaacatcga gctgcgcgac cgttatcttg cggaaatcgc caaactgccg
     3121 gaaaagcagc agctttcccg ttatcttttg ttggcggaat cggcgttgaa ccggcgcgat
     3181 tacgaagcgg cggaagccaa tcttcatgcg gcggcgaaga tgaatgccaa ccttacgcgc
     3241 ctcgtgcgtc tgcaacttcg ttacgctttc gacaggggcg acgcgttgca ggttctggca
     3301 aaaaccgaaa aactttccaa ggcgggcgcg ttgggcaaat cggaaatgga acggtatcaa
     3361 aattgggcat accgccgcca gctggcggat gctgccgatg ccgccgcttt gaaaacctgc
     3421 ctgaagcgga ttcccgacag cctcaaaaac ggggaattga gcgtatcggt tgcggaaaag
     3481 tacgaacgtt tgggactgta tgccgatgcg gtcaaatggg tcaaacagca ttatccgcac
     3541 aaccgccgcc ccgagctttt ggaagccttt gtcgaaagcg tgcgcttttt gggcgaacgc
     3601 gaacagcaga aagccatcga ttttgccgat gcttggctga aagaacagcc cgataacgcg
     3661 cttctgctga tgtatctcgg tcggctcgcc tacggccgca aactttgggg caaggcaaaa
     3721 ggctaccttg aagcgagcat tgcattaaag ccgagtattt ccgcgcgttt ggttctggca
     3781 aaggtttttg acgaaaccgg agaaccgcag aaggcggagg cgcagcgcaa cttggttttg
     3841 gcaagcgttg ccgaggaaaa ccgaccttcc gccgaaaccc attgaaacct tcagacggca
     3901 tcgttgaaat gccgtctgaa aaccatttca cttgacaaac agactgacag aaaacccgta
     3961 tgactctttt aaaaaacgat accttcctcc gcgccctgct caaacagccc gtcgaataca
     4021 cgccgatttg gatgatgcgc caggcggggc gttatctgcc cgaatacaaa gccacacgcg
     4081 cgaaagcggg cagcttcctc gatttgtgca aaaacaccga attggcgacc gaagttacca
     4141 tccaaccttt ggaacgcttc gatttggacg cggcgatttt gttttccgac atcctgaccg
     4201 tccccgacgc aatgggcttg ggactgtatt ttgccgaagg cgaaggcccg aaattcaaac
     4261 gcgccatgca acacgaggcc gacatcgcca agctgcacgt tcccgatatg gaaaaactgc
     4321 aatacgtttt cgacgcggta acttccatcc gtaaagcatt ggacggccgc gtaccgctta
     4381 tcggcttttc cggcagcccg ttcacactcg cctgttatat ggtcgaaggc ggcggcagca
     4441 aagaattccg caccatcaaa accatgatgt actcgcgccc cgatttgctg cacaaaatcc
     4501 tcgataccaa cgcccaagcc gttaccgcct acctcaacgc ccaaatcgac gcgggcgcgc
     4561 aggcggtgca aattttcgac acttggggcg gcgtgttgag cgacgcggcg tttaaagaat
     4621 tcagcctcaa atacatccgc cagatcgtcg ccggactcaa acgcgaaagc gaaggccgcc
     4681 gcgtgcctgt tatcgtattt gccaaaggcg gcgggctgtg gctggaaagt atggcccaaa
     4741 tcggcgcaga cgcattgggc ttggactgga cgtgcaacat cggcgaagca cgccgccgcg
     4801 tcggaaacca agtcgccctg caaggtaact tcgacccgtc cgccctcttc ggtacgccgg
     4861 aatccatccg cgccgaagtc gcacgcatcc tagccgacta cggacacggc agcggccatg
     4921 tcttcaacct cggacacggc atcaaccaac atgccgaccc cgaacacgcc aaaatcttag
     4981 tcgacaccgt acacgagctg tcgcggcagt atcacggcgg gtaagccggc aggaaaccgc
     5041 ccgatatgcc gtctgaagcc gagggatgga aaaataaggc aatgcggcaa tatccgccgt
     5101 gtatggatag tacatgacgg cggcggtgtt gccgcattgg cgcaatccca accgtcccta
     5161 ttttcagacg gcatttttgt tttcagatgc agggaaaacc gatggcaaaa acgcttaaaa
     5221 ccctttacca atgcaccgaa tgcggcggca cttccccgaa atggcagggc aaatgcccgc
     5281 attgcggcga gtggaacaca cttcaggaaa gcttggccgc gcccgagccg aaaaacgccc
     5341 gcttccaatc ttgggcggcg gatacctcga ccgtccaatc cctctcctct gttaccgcga
     5401 ccgaagtgcc gcgcaatccg accggtatgg gcgaactcga ccgcgtattg ggcggcggtt
     5461 tggtcgatgg tgcggtcatc ctgctcggcg gcgatcccgg catcggcaaa tccacgctgc
     5521 tgttgcaaac cattgccaaa atggcgcaaa gccgcaaagt gctgtacgtt tccggcgagg
     5581 aatctgccca acaggtcgcc ctgcgcgcgc aacgtttgga actgcccaca gaaggtgtga
     5641 acctgcttgc cgaaatccgc atggaggcga ttcagacggc cttgaaacag catcagcccg
     5701 aggtcgtcgt catcgactcc atccaaacca tgtattccga ccaaatcact tccgccccag
     5761 gctccgtgtc gcaggtgcgc gagtgtgccg cccaactgac gcgcatggcg aaacagatgg
     5821 gcatcgccat gatactggtc ggacacgtga ccaaagacgg cgcgattgcc ggcccgcgcg
     5881 tgctggaaca catggttgat accgtgctgt atttcgaggg cgaccaacat tccaactacc
     5941 gcatgatacg cgccatcaaa aaccgcttcg gcgcggcaaa cgaactgggc gtgttcgcga
     6001 tgacggaaaa cggtttgaaa ggtgtgtcca acccgtccgc catcttcctc gccagctacc
     6061 gcgacgatac gcccggctcg tgcgttttgg ttacacagga aggcagccgc ccgcttttgg
     6121 tcgaaattca ggcattggtc gatgacgcgc acggcttcac gcccaaacgc ctcaccgtcg
     6181 gactggaaca aaaccgtctt gcgatgctgc ttgccgtgtt aaaccgccac ggcggcatcg
     6241 cctgtttcga tcaggatgtg ttcctcaacg ccgtcggcgg cgtgaaaatc ggcgaaccgg
     6301 cggcggattt ggcggtcatc ctcgcgatgc tttccagctt ccgcaaccgc cctatgcctg
     6361 aaaaaaccgt ggttttcggc gaaatcggct taagcggcga agtccgcccc gtcgcacgcg
     6421 ggcaagagcg gctcaaagaa gcggaaaaac tcggcttcaa acgcgccatc gttcccaaag
     6481 ccaatatgcc gcgcaacgcc aaagagtttc cgaacctgaa aatctacggc gtttcgagtt
     6541 tgcaggaagc catcgatatt tgccgtgaca gcagggaata aacggaaatg ccgtctgaaa
     6601 tcaggtttca gacggcattt ggtttgtggc ggattgaaac aagaaggcat accggcgaca
     6661 gataagattt gcggcaaagt tgcctgtgat atggcaaaac gcacacgccc gtcatccccg
     6721 caagggcggg aatccggaat cgtccgtttc ggcaatgatt gaaaatcacg gtaacccaac
     6781 cgcttggatt cccgacttcg tgggaatgag gggcgtgtgt gtttgatttc catccgccat
     6841 atgtcggcga cgggcttatt cgcctacggt tttttgtatc agtttttcgg cgtttgccaa
     6901 agtgtttgcc acttcgtcaa aaccgatgcg gctgccggcg atgagggcgc gcgtatcggt
     6961 ataggcggcg cgtactttgc cgtctgtttc ggtaacgagg acgcgcaggg gcagttgcag
     7021 ggcgaaggcg gggtctttga ccatcagcgg cgtgccggct ttgggcgtgc cgaagacgat
     7081 gacttttgcc ggctgcatcg ttaaaccgtt tcggtgggcg gcttcctgat ggtcgatgac
     7141 ggcaaaaatg tccatccctt tgctttttat ggcggtttca aggcggctga cggtttcgtc
     7201 aaaactgtat tttgaggtga gggtatgcgt ggtcatagcg gtttcgtttt gggtttgcgg
     7261 ttcgctggca ggatgtgccg aagcggttga aatgcagagt gcggatgcgg caatcagggg
     7321 gagtatgtgt ttcatcgtat ttcctttttc cttttcggtt tgtttatcag gcttcggacg
     7381 gggcggcacg cgccgcgccc gatgttgcgc cgcgtgctgg ggtgtcgtat gccgtctgaa
     7441 agcctgtcct ttcagacggc attgcgtcat ttcatccctt ttttgagcag gtcttcataa
     7501 ccgccgtgat tggcaacatt tgtataacct gcttttttca gctcctgaag ggcggctttg
     7561 gcacgccgtc cgctgcggca gtagaggttg accggcgtgt ctttgtcggg cgcggcttcg
     7621 tgtatgcggc ggacgatttg gtcgacgggg atgttgaccg cgttgtgcaa atgaccttcg
     7681 ctaaattcct gttcggaacg gacatcgatc caaacggccg gatgttgcgc ggtttgggcg
     7741 gcggctaggg gtttttgcgg ggctgcctgc gcggcaaagg cggctgaggc aatgagtgcg
     7801 gcggtaatca ggtgtttgat attcataggg ttctcctgcg gttgtcgtct taagggacgg
     7861 gaagttattt tatctgttcc aaagcggcgg catctatgtc ccaacgccaa acgccgccgc
     7921 ctttgccatc caatccgcgc aaaaacaggt agcggacgga aacggcggcg ggcggttgtc
     7981 cgcgcagttt gaagtagcgt gcggcggcaa cggcgtaaat cagcgcctga aggtaatagt
     8041 ggtggtgcgc gacggcttcg tccatcgcct gttgcgtgta ggcggatgcg tccgcgccga
     8101 gatggtttga tttgtagtcg atgacgcaga tattgccgtc ggggtcttgg cagaccatat
     8161 cgataaagcc gtttaaaaag ccgttgacgg tgtggaagtc gagcgtttcg gcggcggcac
     8221 ggcagacttc gggcaatcgg atatcgtcgc gggcaaacca gtcgcgcagc cgtttgaggc
     8281 cgaagtcttc ggtgtggagg gtaaagccca tttcgggaca gcggcactcg ggcgggatgt
     8341 cggacaggca gtatgccccc gtcagcggcg ttttgcggca ggcttccgcc atttcggcaa
     8401 cggcaggcag ccatatttct tcaaatccgt attttttcag cttgtcggca atgagagttt
     8461 cctgtccggc ggctgcttgt ccgaatttga aatcttcaag aatttcgtgc aggcacagcc
     8521 ccgcctgcgt gcctttcgga aaatcgtgta tcgatatgcc gtctgaagcc gtcggcgttt
     8581 cagacggcat cgccggcacc gaggtttcgg cggcatccaa ggacgggcag gcatcttctt
     8641 cgccgccgtc gggcgtttgg gtatggcggc ttaaggcggt aaagctggtg tggcggacaa
     8701 atcggaatct gcgttcggga atgctgtttg cggcaaattc ggcggtttga ccggcgttgc
     8761 cgcgataggc ggcagggggc ggcgcatctt ctgtgaaggc gaaatccgtg ccggccgggg
     8821 cattgtccgt caaacgccgc cagttgcgtt tgagcatcgc gatgccgtct ttttcccagt
     8881 cataggtttg gcggacggtt tcgcggctgt cttgcggcaa gccttcaatc aggtaggcga
     8941 gggggttgtc ggcggtatcg gaagaatagg cggcgtagat gttgagctgt tcctcggcac
     9001 gcgtcagcgc gacataaagc aggcgcaggc gttccgccat ttcctcatcg gcgtattgct
     9061 tctgttcgtc ttccgacagt tgcgcctttg ccaacagttc ggttcgattt gcgctttggt
     9121 ggaggatttg ccagtcggac ggcccggtat cttgcgcgtc ccacgcaaac gggcagtaca
     9181 ccagcggata ctgcaaacct ttcgaggcgt gcatggtaac gattttgacc aaatcttcgt
     9241 cgctttccag acggatggcg cggttgtcgc cgctgttgtt gccggccagg ctgatttggt
     9301 cgcgcaacca tttgtgcagc gcggcggggt tgcggttttg cgcgtcttcg gcggcaagca
     9361 gttcgagcag ttggaaataa ttggtcaggc tgcgcccgtt gttccggctt aagaggcgcg
     9421 tttcgatgcc gtgtgtttgg gaaaattgct gcatggcggc gaaaatgccg tattgattcc
     9481 agttgtcgag cgcggttcgg gcagattccg cccaatgcaa aatctcgctt tcgttttggt
     9541 tgaagtcgtg caattgctgc gcgtcataac cgaatatgcc gcttgtcagg acaaagcgca
     9601 gcgttccggc gcggcgcggt tcgagccaga agccgatgag tgcggaaagg gcggcggctt
     9661 cgggcgaggc gaacacggat tcgcgcgaaa gcaggacgct ttgcacctgc cgttttttca
     9721 gggcagcgga aaccatcacc gcctcgttgt gcgtgcgtac cagcacggca atatcgcccg
     9781 actgcaacgg gcagcctttg aaattcagac ggcattcggc ggcttcgttg agcgcgtggg
     9841 cgatttcgtc ggcgcaatag tcggcggcac ggcggcgcaa aacgtctttg ttggcttttt
     9901 cattgtcgtt ttcgtgcagc caacgaacct gtacggcagg acgttcgggg gacaacctgc
     9961 tttcggcacg cgccgcaccg acttccgaat agccgatgtt ttccaaaacg aacgggcgtt
    10021 ctttgaggcg gaacagcgcg cctatgctgc cgataagcgc ggcgtggctg cggtagttgg
    10081 tggcgagcgt gtagcggtgc cgcgcgtctt ccgccgcctg aaggtaggcg taaatgtccg
    10141 ctccgcgaaa gctgtaaatc gcctgtttgg gatcgccgac gaggaacagc ggtcggtttt
    10201 gggcgatgaa gattttttgg aagatttcgt attgcagcgg gtcggtgtct tggaactcgt
    10261 cgatcagcgc ggtttcccag ttttcggcaa cggcgcgggc gagggtttcg gcgtgcggat
    10321 tgtcggtcag cgcggtgtgg acatcgagca gcaggtcgtc gaaaccgcgt tcgcggcgcg
    10381 attttttcat ctcggcaagg ctgcggttga ggtatccgat taaatccagt tgcagccgga
    10441 ttattgttgc ttcttccgct tcttcgagtg cgtccaaatc acgcctgaag tctgccagtt
    10501 tctgcaattc ggcaaatact gccgcatcgg gcgttttgcc ttttttcagt ccggcttcga
    10561 gtttgtcgga cgcaagtttc aagagccgtt cgtgcagctt tgcctccaaa aagggcaaat
    10621 ccggcgacag ggctttttgt tccaatgcgt caaacagttc ggcaaaactg tttttccgat
    10681 atgaattgcc gtttaaaagg ggatggatgc gccaaaaagt ttcttttaat tcagccagat
    10741 ttccgcaaat gttttgccag cttgccaaag cggcatcccg ggcttgcggc aaatcggttt
    10801 gcggacggcg gaaattcagg tacgggcggg acaggtaggc gcggatttgg gcaaggacgg
    10861 tttgcggcac agctttgcgt ttaaacgcca atgcggcaag caccggatca ttgctgacgc
    10921 gttcccgcca aaaatcttgc gccgggacaa gcaggcggtc gccgtcttct tcggtcagtt
    10981 cgacatcgaa cggtgcttgg cacaaaaacg cgtagtcgcg caggatgcgc tggcagaagc
    11041 cgtggatggt atagatggcg gcgttgtcga attgcccgat ggcggctttg aggcggacaa
    11101 tcagacgcgt ccggccctct ttttgcaaag cctgttttaa gagtgcgggc aggaaggtgt
    11161 cgcctttgtg gtgttcggcg cagtaggcgg cgatgccgtc tgaaagcgtg tcgtctccaa
    11221 gtttggcaat ttctttactt tctaaaacct gcaacacatc gtccaaacgt gcgcgcaggc
    11281 gtgttttcaa ctcggcggtg gcggctttgg tgaaggtaac gaccaatacg cgctcgacgt
    11341 ttttttgttc caatacgatc aggcgcgtaa acagggcggc aatgccgtag gtttttccgg
    11401 tgccggcaga ggcctcaatc aggttggtgc cggcaatggg gacggtcagc gggtcaaatg
    11461 cttggatggg tgcagacata gtgcgcgctc ggaaaacggt tggacggtat agtggattaa
    11521 caaaaatcag gat
//
LOCUS       DAXHKG010000060        11013 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.060, whole genome shotgun sequence.
ACCESSION   DAXHKG010000060 DAXHKG010000000
VERSION     DAXHKG010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11013
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.060"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            147..1544
                     /gene="aspA"
                     /locus_tag="ACFMWP_001200"
     CDS             147..1544
                     /gene="aspA"
                     /locus_tag="ACFMWP_001200"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HFC5891806.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFTAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1616..2491)
                     /locus_tag="ACFMWP_001201"
     CDS             complement(1616..2491)
                     /locus_tag="ACFMWP_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HFC5891807.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDIGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVEAAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKHGGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFSGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWAEVKALFGI"
     gene            complement(2493..3185)
                     /locus_tag="ACFMWP_001202"
     CDS             complement(2493..3185)
                     /locus_tag="ACFMWP_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HFC5891808.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRTQYDASFRGHEERGRQEEAFRREQARREQFYREQMRREQA
                     LRQAFERQASRSRHAYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVILAYMKRNS
                     LDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYFYRIIAGFIRF
                     NGGRAVAPEKWI"
     gene            complement(3207..3686)
                     /gene="ybaK"
                     /locus_tag="ACFMWP_001203"
     CDS             complement(3207..3686)
                     /gene="ybaK"
                     /locus_tag="ACFMWP_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HFC5891809.1"
                     /translation="MSKQTYPVTPAVRVLRENGIKFEPFIYPYEEHGGTAQFAHLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3762..4124
                     /locus_tag="ACFMWP_001204"
     CDS             3762..4124
                     /locus_tag="ACFMWP_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC5891810.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATE"
     gene            4159..5022
                     /locus_tag="ACFMWP_001205"
     CDS             4159..5022
                     /locus_tag="ACFMWP_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HFC5891811.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGDDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     AASAEPLAAQEPCLAFTAECGSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLH
                     EILSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEETGIVLDSVKDSESFTALAVIKFSAAQKELTVPNGGIFKA
                     VHPFFKTENAE"
     gene            5120..6079
                     /gene="ttcA"
                     /locus_tag="ACFMWP_001206"
     CDS             5120..6079
                     /gene="ttcA"
                     /locus_tag="ACFMWP_001206"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HFC5891812.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIIVCLSG
                     GKDSYALLDILRQLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIAPQKAERKVINILANKPKTCGA"
     gene            complement(6173..9112)
                     /locus_tag="ACFMWP_001207"
     CDS             complement(6173..9112)
                     /locus_tag="ACFMWP_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HFC5891813.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRVEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFSDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRDELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9125..>11013)
                     /locus_tag="ACFMWP_001208"
     CDS             complement(9125..>11013)
                     /locus_tag="ACFMWP_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HFC5891814.1"
                     /translation="PDLIDTAGVNTEAIYTSDGITANSTQLEQLKKLFPACFDADGNF
                     LIDRLQAEIAPQTDIGREFYEMNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQ
                     NLLIRGDNLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANI
                     DEDEAARILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLL
                     CDEVFGEGNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKK
                     IVINDELYWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSY
                     GKTIIGKLRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPL
                     DLLKRLVLSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTA
                     EKSEARKAGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDF
                     SPEQPDLPLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMN
                     AGFTSADLLAFIRKLDDDAAFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNV
                     VIRV"
BASE COUNT         2646 a         2943 c         2605 g         2819 t
ORIGIN      
        1 ataacacccg aaaacaacgt ttcccgtttt cagacggcat acgatatgga caatttcatc
       61 cggccggtat agtgttcgtc ctgcggcggc atctttccga tggcgcattt tttcaatatt
      121 aattatccga cttacaaagg taaaacatga ctgtccgtat cgaacacgat ttattgggcg
      181 accgcgagat tcccgccgaa gtgtattggg gcatccacac tctgcgcgcc attgaaaact
      241 ttaaaatctc cacacaaaaa atttccgacg tgccgcagtt tgtccgcagt atggtgatgg
      301 tgaaaaaagc aaccgcgcag gcaaacggcg aattgggtgc agtaaaaccc gaaatcgccg
      361 ccgccattga aaaggcttgc gacgaagttc tgctgaacaa ccgctgcctc gaccaattcc
      421 cctccgacgt gtatcagggc ggtgcgggaa cttcggtcaa tatgaacacc aacgaagtca
      481 tcgccaacct cgcattggaa gccttgggat acgaaaaagg ccgctacgac atcgtcaatc
      541 cgatggatca tgtcaatgcc agccaatcga ccaacgatgc ctatcccacg ggcttccgcc
      601 ttgccgtgta ttacagcatc ggcgaattgc tcgacaaact gaccgtcctg aaaaacgcct
      661 ttaccgccaa agccgaagaa tttaaagacg ttttgaaaat gggtcgcacc cagcttcaag
      721 atgccgtacc gatgacggca ggacaagaat tccaatcttt ccaagtgttg ttggaagaag
      781 aaatcctcaa cctcgaccgc acgcgccaac tgcttttaga agtcaatttg ggcgcaacgg
      841 caatcggcac gggcgtgaac acgcccaaag gctacgccga actggtggtc aaaaaactct
      901 ccgaagtcag cggcttgcct tgcaaactga ccgaaaacct gattgaggcg acctccgact
      961 gcggcgcata tgtgatggta cacggcgcat tgaagcgcac ggcggtcaaa ctctccaaaa
     1021 tctgcaacga cttgcgcctg ctctcttccg gcccgcgtgc cggcttgaaa gaaatcaacc
     1081 tgcccgaatt acaggccggt tcttccatta tgcctgccaa agtcaatccc gtgattcccg
     1141 aagtggtcaa ccaagtctgc ttcaaagtca tcggcaacga cacgacgatt accttcgccg
     1201 ccgaagccgg gcaactgcaa ttaaacgtga tggagccggt catcgcccaa tgtatgtttg
     1261 aaaccatttc cctcttgggc aatgccgcag tcaacctgtc cgacaaatgc gtcaaaggca
     1321 ttacggtcaa ccgcgaaatc tgcgaacgtt acgttttcaa ctccatcggt ttggtgactt
     1381 atctgaatcc gtatatcgga caccacaacg gcgatttggt cggcaaaatc tgcgcccaaa
     1441 ccggcaaagg cgtgcgcgag gttgtcttgg aacgcgggct gttgagcgaa gaagaactca
     1501 accgcatcct ctctcccgag aacctgatga acccccatct gtaacgttgc agacaaatgc
     1561 cgtctgaagc agggatgctg cttcagacgg cattttgtta tatcaatcag ccggattata
     1621 tgccgaacag tgccttgacc tccgcccaat aaaacaggca ggcgatggaa cacagtgcca
     1681 acacgattcc cgccgtattg attgtgttga ttttttcctt aaaaaacagt gcgcccgaaa
     1741 gcgtccccaa aacaatcacg ccgatattca taccggcaaa aaccagcgtg ggattgtcct
     1801 tcatcatttg gtgcgcggtg atgtaggtta cgatgttcat gaagttcaaa ccgcccaaga
     1861 gtatgccgcc gaccacactc tcaacgcgcc atctgaccga tttggcaaac aggcaggcaa
     1921 acatcagcac acctgccagc acaaatgcaa ccagcaggtt gcctgaaaat gccgtgccgc
     1981 ttttggcaag ctgtttgaac aggatgtcga taatgccgta acccgcccac acgcccagca
     2041 gcaatgccgc ctgccgccac gcgctgcctg attttttgcc gccgccgtgt ttccaaagca
     2101 ggcagaacag cgcggcaaat gcgaggcaca gcccgattag tttgccttcg ctgagttttt
     2161 cgccaaacag cgtcaaggcg gcaacaatcg gcaaaaacag cgacaaacgc tgcgccgcgt
     2221 cggatttgac gataccggcg gcttccacag atttgcccat tatcacgaat acggacggca
     2281 gcagcacgcc caaagcggca aacagcggcc acgtcggcaa aaatgcgccg atattgccga
     2341 tatccggctt caataccagc agggtcagta tgaccgcgac cacataattg acggcgaccg
     2401 cctgcgcgat gtcgattttt ttcttccttg ccattttcag caaaatggaa accgacacgc
     2461 tgaacacgat gctgattaac aggtaagcca tactatatcc atttctcggg ggcaaccgcc
     2521 ctgccgccgt tgaagcggat aaagccggcg atgatgcggt agaaatacca gacgttcgtt
     2581 gcaataataa tcagcacgcc gatacccaaa agggcagtca gcgcacccaa aatataaagc
     2641 caaaatgtgc gccaaaaggt tttaatcagg tattcggtat gtgcggcata gacaatgctg
     2701 tccaaactgt tccgtttcat ataggcgaga atcacgccga ctatgggcat gaacagcatg
     2761 attgcaccca aaccgaacag gatgtaggcg gcgaggacat agttgcgccc gcttccgccg
     2821 ccggacggtt cgtaagcatg gcgcgaacgt gaggcctgcc gttcaaacgc ctgtcttaac
     2881 gcctgttcgc ggcgcatctg ttcgcggtaa aactgctccc tgcgcgcctg ttcacggcgg
     2941 aatgcctctt cctgccgccc gcgttcctca tgccctctga aagacgcgtc gtattgcgtc
     3001 cgtttcgaca ggtcggaaag cgtatcgtaa gcccgttgga tttctttgaa cttttcttcc
     3061 gcctgcggat tacccggatt gcggtcggga tggtatttca tcgccagctt gcggtaggcg
     3121 cgtttgattt cgtccgcccc cgcctgcggc gacacgccca atacggcata caaatctttg
     3181 tccatattgc tccttatact tccccgtcaa accgctgcct gtattgtttt cgggttcaaa
     3241 atatttaaat ctccgggacg gatgccgata atgaacccgc gttttccgcc gttgatatag
     3301 atggtttcca aatccatcac cgactgttcg acgtaaatat ccaattttgt ccggatgccg
     3361 aacggcgttg tgccgccgac cagatagccc gtccacttgt ttgcctgtgc gggcgtggcg
     3421 ggttcgatgt gtttcgcacc caaatgccgc gccagattgc gggttgaaat ctgtttgtcg
     3481 ccgtgcatca agacaatcag ccccttaccg ttttcatctt gcaaaacaat ggttttaata
     3541 accaagtgtt cgtctttgcc gaacaggtgc gcaaattggg ccgtaccgcc gtgttcctcg
     3601 tagggataga tgaaaggttc gaacttgatg ccgttttcac gcaaaacgcg tacggcaggt
     3661 gttaccggat aggtctgttt actcattttt cgtcatgcaa aacatggaaa tcacccaaat
     3721 gcaatgttac catatatccc cctttattga aggaaaccga tatggatatc cgatatttcg
     3781 gcacaacgcc ccgctattcc gaagccgtcg gcgcaaacgg cttgattttc ctctccggca
     3841 tggttcccga aaacggtgaa acggctgccg aacagactgc cgacgtgctt gcccaaatcg
     3901 accgctggct ggcggaatgc ggctcggaca aggcacacgt tttagatgcg gtcatctatc
     3961 tgcgcgatat gggcgactac gcggaaatga acggcgtgtg ggacgcttgg gttgccgccg
     4021 gcagaacgcc tgcccgcgcc tgcgtggaag ctcggctcgc ccgtccggag tggcgcgtcg
     4081 aaatcaaaat aaccgccgtg aagaaagacg cggcaaccga ataaacagat ttcctttata
     4141 tttcagagta cgcaaatgat gaaaacctta ctgccctttt tcggcgtggt gcgcgtcagc
     4201 ggcgaagacc gccaaacctt cctgcacgga cagctttcca acgacatcaa taatcttcag
     4261 accgggcagg cgtgttatgc gacttacaac acgcccaaag gccgcgtcat cgccaatatg
     4321 attgtcgtca accgtggaga cgatttgctg ctgattatgg cgcaagactt gcttgaagca
     4381 acggtcaaac gtttgcggat gtttgtgttg cgtgccaaag ccgtttttga aatccttgaa
     4441 gattacgccg tcggcgcgga attggcagca tccgccgaac cgcttgccgc gcaagaaccc
     4501 tgccttgcct ttaccgccga atgcggttca gacggcatct gttccgtcgt cctgccccat
     4561 cggggcattt tgcacatcgc ccccgaaacc gccctgccgc cttatgatgc cgccgccgaa
     4621 aacgcgtggc ggctgcacga aatcctcagc ggttatccgt ggatatgcgc ggctaccaaa
     4681 gaaactgccg ttgcccaaat gctcaaccag cacatcatcg gcggcgttca cttcaaaaaa
     4741 ggctgctacc cgggacagga aatcattgcc cgtgcccagt atcgggggca ggtcaaacgc
     4801 ggcttggcgg tattgtcggg aaattcggcc gtcgaagcag gaaccctgct gacggcagac
     4861 ggcgaagaga ccggcatcgt gctcgacagc gttaaagatt cggaaagctt taccgccctt
     4921 gccgtgatta aattctccgc cgcacaaaaa gaactgaccg tcccaaacgg cggtatcttc
     4981 aaagcggttc atcccttctt taaaaccgaa aatgcagaat aatccctcta atgccgtctg
     5041 aacctttttc agacggcatt ttaaaatcgc ccctgttttc ggttacaatg ccgcatccct
     5101 aatttttcaa accaccgcca tgtccaaaaa aaccaaacaa gaactcgaaa acaacaaact
     5161 cagcaaacgc ctgcgccacg ccgtcggcga cgcgattaac gatttcaata tgatcgagcc
     5221 ggacgacaaa atcatagtct gcctctccgg cggcaaagac agctatgccc tgttagacat
     5281 cctgcgccag ctccaagcca gcgcgccgat tgattttgaa ctggtcgccg tcaatctcga
     5341 ccaaaagcag ccgggtttcc ccgaagaagt attgccgacc tatctcgaaa gcataggcgt
     5401 gccgtacaaa atcgtcgaag aagacaccta ctccaccgtc aaacgcgtat tagacgaagg
     5461 caaaacgact tgttcgctgt gcagccgcct gcgccgcggc atcctctacc gcaccgcaaa
     5521 agaattgggc tgcaccaaaa tcgccttagg acaccaccgt gacgacatcc ttgccaccat
     5581 gtttttaaat atgttttacg gtggaaaact caaagccatg ccgcccaagc tggtgagcga
     5641 caacggcgaa cacatcgtca tccgtccgct ggcgtatgta aaagaaaaag acttaatcaa
     5701 atacgccgaa ttaaaacaat tccccatcat cccgtgcaac ctctgcggct cgcaacccaa
     5761 cctgcaacgc caagtcatcg gcgatatgct gcgcgattgg gacaaacgct ttcccggccg
     5821 catcgaatcg atgttctccg ccctgcaaaa cgtcgtccct tcccaccttg ccgataccga
     5881 actcttcgac tttgccggat tggaacgcgg tcaaaccctg aaacacggcg gcgatttggc
     5941 gtttgacagc gaaaaaatgc ccgaacgttt ttcagacggc agcgaagaag acgaaagcga
     6001 aatcaaaatc gcgccgcaaa aagccgaacg caaagtcatc aacattctgg cgaacaagcc
     6061 gaaaacctgc ggcgcgtaac cccccgccgt caaaaatgcc gtctgaagcc cgtttggcgt
     6121 ttcagacggc attttaaaat cccgaagcag acggcttcca aacatttgtt tctcagtgtc
     6181 cgttttcaga atgcccgcct gcgggcatat tttgcccgat cagttcggct atcctctcgc
     6241 cgtcaaactg cgttttgaac accaccttga tttctttgga aatctcggca aacagctttt
     6301 cggcatgttt gattttccgc tcttcgcttt ttcgcaaatc ttccgccccg tcagtccctt
     6361 tggcttcaat cacaaagttc agaatctcgc cgcttttggt tttcacgata taggcaaaat
     6421 cgggcgaata cgtgccgccg ccggcaacgg ggattttgat ggagtttctc ggtattttgg
     6481 tgaatacggt tacgccttca atttggttgt tggcgacatt ttcatgttct atatccgaat
     6541 cgtagaaaat ttcgtcgaag agatagccgg cggcaggccg gtgctccgta tcttcaaatc
     6601 tgcccaaatc tgcttttttc accgcgcgcg gtttgccgtc tttatcggta aatttggtcg
     6661 gatggatttt gctgccgaca agccggtaat ccagttcaaa tttatggaag gaatgatgaa
     6721 gcaaaaaccg gttgaagccg tttttgattt gggcgatggt ctgcatattc aaaaaatcgc
     6781 caatgttcag ttcgtcgcgg acgcgataaa acgcctgatg caaagtctgc atgcggattt
     6841 ttgccgtttg tgccagtttt tccagaagct cacggtaagt cattgtgtta aaacggataa
     6901 aatcttcatc ttcaaaactg tctatgcggc gggaaagcat aagcccgttg ttgatataag
     6961 cttcgtttac cgccgtgcgt atgcctgcct gcgggaattt ggcggcgttt tcacgcaaat
     7021 aggcggtaaa taaatcgaca aattcggctt catccttgat tttgtactgc aaaacggctt
     7081 tatggtgaat cagctcccac aaggctttga gttcttcata tttgccttcg cgcatgatga
     7141 tggtgtcttt gccctcgtct ttggcgttgc tgactttgcc tttgtccaaa cctttgggga
     7201 aggcttcggg ataggcggct tttaatttgt catagccgtc ttcggcaaag ttttcattgt
     7261 cgtcaatgat gccgtctgaa aacagttggt ttaccaatac cagcggtttg atatcggggt
     7321 atttttgcaa tattttttgt ttcagctctt cggtaaactt tttggagatt tcttcctgaa
     7381 aagaattgtc gttgatttcg ccgacaagct gcttcacaaa gtctttttcg ctgctatcga
     7441 caaaataatt cagtttgtac ggtacatcgc gcacccgcgc catcagctcg tttaccggca
     7501 ggcgcaggcc gcgtccgact tcttgcagct tggaagtcgt gctgccgctg gaacgcagtt
     7561 tgcaaatctg gaaaacgttg ggattgtccc agccttcgcg cagcgtccat ttggaaaaaa
     7621 taaagcggcg cgggttgtcc aaagacagca gtttttcctt atcgtgcagg atttcattga
     7681 tttcctgctc gattctatcg tcgctgtctg tattgtcttt ggaaaaatag ccgccgtggc
     7741 aggcggatac atcgtccaac gtcttttgca ggtaatcgcg gtaaaacggg tcgctttccg
     7801 ttttcagacg gcgtgccgct tccacgcgaa tccagctttc aaatttatct ttcaggctgc
     7861 ctgaaagctc gttgccgctg cggtagcccg cgatatcgtc aataaaaaac agcgtcagcg
     7921 gcttgatttt gggctgtggc gcgcgttctg ccaaaagcgc gcgttccagc ttgaaatgtt
     7981 cggcaaccgc ccgctgcatc atcgcatcct gcaccgtttg cgaataggaa taagggttga
     8041 tgacggcacc cgttttcaac tccaagccgt tgcttaacac caccacggtt ttattcattt
     8101 tgtcgatttt caaatccgaa atagccggat ggatttgcgc caaatcttcg ccttttgcca
     8161 gtttgaacgt ctgctttttg tccttttcgt ttaattcaaa tttcgcttct ttgccgcccg
     8221 acgacaccag ttttaccgcc gcatccatgc cgccctgcat ttcttcctga aacacgcgca
     8281 cgcctttgac cagcccgtcg ttaaacgcgt ctactgccgt caaacggtaa agcaagttgt
     8341 aatattcatc gttaaatgtc gcaccgtagc gcaaaatata ttgcggtttt aagcgtttga
     8401 tattgcccca cgttttcgcg ctctcccggg tcgggaattt atgcggttcg tccacaatca
     8461 caaacgggcg cacggcggcc aatgcatcaa cgggattgtc aaacaaatct ttcaatgcct
     8521 tgtcgcccgt atcgttcatg gacgacgaat taaccatgcc cgcgttaatc agcagcacat
     8581 ggatttcctt tttgttttcc gctttgacaa attgctcaat cgttatgggc gcattggact
     8641 ttttgccctt attctttttc gcgctttcca ccacataggt tttcaggcgc acgccttcat
     8701 aatcgccgcc gaaatcctgt tcaaaatgct ctgccaaagc cttgctttgc aaaaactgct
     8761 gtgttcccgc cttaatggac aaagtcggca cgaccacgat aaatttgaac acgcccagcc
     8821 aacggtgcag ctcgaacatg gtttgtgtgt aggtataggt tttgcccgtg cccgtttcca
     8881 tggaaatatc aaggatattt tggtcgtccg aacggtcggg gaatcggccg tctataccgt
     8941 tttggctttg cactttcagg atattgtttg cgtattgttt tgcagcaaac aaaagttcgg
     9001 gattttcgtc tgccgtccga tatttgggcg ttgccccgtc aaacacgccc aaaaccgccg
     9061 aaaccgcccg catttggtgc ggctggtttt tctcgtaatt aaaaccgctc atgaattgcc
     9121 tccgtcaaac cctgataacc acattcaact caatctcttt tttattggca taaccgcgaa
     9181 ccgcctggtc aagttcgtgc tgcatggcgc ttgccatatt gctgccgaat acaatcacgc
     9241 ggttgggatt gaaagccgca tcgtcgtcca gcttgcggat aaacgccaac aaatcggcag
     9301 aagtaaaacc ggcattcatc agatacagcc gtttttcgca cagatacgcc gtgtaagccc
     9361 ctaaccgcac aggctcaacc ggcgtggtca gtgccgcccc gtcatacagc gtccaggtgg
     9421 tcagaagcgt ttgcagctgt tcttcgctta attcatcgtt aagcggcaaa tccggttgtt
     9481 cgggcgaaaa atccttgtcc ggatgctgcc tgaaattgtc tgccgtttga aagattttga
     9541 agcccgaatc gcccgtgtaa tcgggatgtt cgacgcggat tttggcggcg gctttttcta
     9601 tgcgggcttt ggtgatgtcg aagatggtcg ggtagcctgc tttacgggct tcggattttt
     9661 cagcggtttt ttcgggaagc tgtacacaga tatagcggcg gttaccgttt tgtccttcgg
     9721 cgttaagctg catcacggcg tgggcggttg tgccgctgcc tgcgaagaag tctaggatta
     9781 ggtcagtttg atttcccttg aaagttgcag aaagaactaa tcttttcaat aaatctaatg
     9841 gttttggtgt ttcaaaagga gaataacctt ttccagtttc aaacaactct tctaattcac
     9901 gaataccatc tttagtaaga tttttactta tatttccaat atttaagatg ctatgaaatt
     9961 tggaaaaatc atcggatact tttctaagtt ttccaataat tgttttccca taagacttcg
    10021 gaattaagat atattcatta ttttcaatat ctttatcaat tttgttttta aactcaattc
    10081 cttttatttc aataatatct tcgtaatgca agttcccata tttgccaaac tgttcgcgaa
    10141 cggcatcttc ctgtatccaa tataattcat cattgattac aatttttttg ccgcgtatat
    10201 cttttggtct ttttagattg tcaaaatgag taatatcttt cgcataaact aaaacagttt
    10261 catgcccatt tacaacatat tttgcattac caccaccttc tgatgtatta acaattaaat
    10321 ctttaataaa attcccttcc ccaaacactt catcacacaa caacttcaac tgcgccgctt
    10381 cgttatcgtc aatcgagata aaaatcacgc cgtcgtcctt taacagttcg cgggcgatat
    10441 acaggcgcgg atacataaag gtcaaccatg cactgtgcga gtttgagcct ttgtcggtga
    10501 aatctaaaat ccgcgcggct tcgtcttcgt caatattggc taagcaggca agttcggctg
    10561 gtgtgaattt gcggtcgtcc tgatagacaa agccgtctga tccggtgttg tagggcgggt
    10621 cgatgtaaat catcttcacg ctgtttgtgt aggcgttttt taagtgtttc aacacttcta
    10681 gattgtcgcc acgaatcagt aggttttggc tgcctgcatt ttcgggtttg gcgttgtgcg
    10741 tcttgtcttc acttatcagg gtttcgggcg gcaggttgcg aagcaggcga gcatatgatt
    10801 tgcccagcca gttcatttcg taaaattcgc gtccgatgtc ggtctgtggc gcaatttcgg
    10861 cttgtaatct gtcgataagg aaatttccgt ctgcgtcaaa acaggcggga aacagttttt
    10921 tgagctgttc gagttgggta gagttggcgg taatgccgtc tgaagtgtag attgcctcgg
    10981 tgttcacccc ggctgtgtcg attagatcag ggg
//
LOCUS       DAXHKG010000061        10936 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.061, whole genome shotgun sequence.
ACCESSION   DAXHKG010000061 DAXHKG010000000
VERSION     DAXHKG010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10936
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.061"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..183)
                     /locus_tag="ACFMWP_001209"
     CDS             complement(<1..183)
                     /locus_tag="ACFMWP_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891815.1"
                     /translation="MPSESGGFFWFGRLWAHPFPRKQKPKIPSFPQKRESSLSGFSDF
                     RHISTRFNFVISPVSVI"
     gene            complement(227..1270)
                     /gene="argC"
                     /locus_tag="ACFMWP_001210"
     CDS             complement(227..1270)
                     /gene="argC"
                     /locus_tag="ACFMWP_001210"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HFC5891816.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMPHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(1267..1548)
                     /locus_tag="ACFMWP_001211"
     CDS             complement(1267..1548)
                     /locus_tag="ACFMWP_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891817.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQRSDGIPANHTKEKP"
     gene            1802..2957
                     /locus_tag="ACFMWP_001212"
                     /pseudo
     CDS             1802..2957
                     /locus_tag="ACFMWP_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
     gene            2966..3193
                     /locus_tag="ACFMWP_001213"
     CDS             2966..3193
                     /locus_tag="ACFMWP_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891818.1"
                     /translation="MKNWKQFTFFVILVIACYQVLYFLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQEKEYKND"
     gene            3186..3539
                     /locus_tag="ACFMWP_001214"
     CDS             3186..3539
                     /locus_tag="ACFMWP_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891819.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRDWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3600..4226
                     /locus_tag="ACFMWP_001215"
     CDS             3600..4226
                     /locus_tag="ACFMWP_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HFC5891820.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTAEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHGNETRSLKATVERLENQKLH
                     ISQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
     gene            4130..4378
                     /locus_tag="ACFMWP_001216"
                     /pseudo
     CDS             4130..4378
                     /locus_tag="ACFMWP_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFP transporter"
     gene            4687..4989
                     /locus_tag="ACFMWP_001217"
     CDS             4687..4989
                     /locus_tag="ACFMWP_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891821.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            5273..5425
                     /locus_tag="ACFMWP_001218"
                     /pseudo
     CDS             5273..5425
                     /locus_tag="ACFMWP_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117473.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
     gene            5563..7292
                     /gene="hrpB"
                     /locus_tag="ACFMWP_001219"
                     /pseudo
     CDS             5563..7292
                     /gene="hrpB"
                     /locus_tag="ACFMWP_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
     gene            7401..>10936
                     /locus_tag="ACFMWP_001220"
     CDS             7401..>10936
                     /locus_tag="ACFMWP_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HFC5891822.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGGADYTGVLARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTI
                     ALDTTALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNGGRIESKGLLVIETGEDISLRNGAVVQNNGSRPA
                     TTVLNAGHNLVIESKTNVNNAKGSANLSAGGRTTINDATIQAGSSVYSSTKGDTELGE
                     NTRIIAENVTVLSNGSIGSAAVIEAKDTAHIESGKPLSLETSTVASNIRLNNGNIKGG
                     KQVVLMADGDIQAKASNLNASGNLYIHAGKDLDLNADKDLSTQSISLRADNTALISSN
                     GNTLTAEKNLDIQAGSLSVRQSNLQSSGGNVQMSATKGNISLNQSWINASQNIDTAAL
                     QGNIISDGLTAVAEVGRVSLLANGNVDFNGLNTLIAEGDINAGSVGKGRLKMDNTDIY
                     ASAGDVKLVAGGQLDLGNGTVNGGHISLDSNKGSMVVQDVHLNARASLKVDADQTLTI
                     NNSKLNSGHNTQINTNHGHMTLNQLDAHSRRHMSISAQGKGKGKDSGQILQNDQQNSK
                     STLAADGVLSLNSSALQVLDNTTLRGGAINIKAGGGIIKRGYIDWETQDTATMRSAEL
                     KPLSGMMSIESGGDNPLTVEPGNRIVSAGDLAVNHNGTFQISARAGNNGNPSAQTASV
                     SAKGNIGIVAGEVDIDAANIAAGKDLALVATKGNISLNSIRNTFSNYQLKTDKHNITQ
                     QLTDVEQELSKLTSDPKYRKAQDLPQMLRRKYKRRDKVFGDSEARLRGLRAEINAADE
                     AWAELQSPVKALLERKQLLQQALLTVSQPGSGHENQGSTLSGQNIKLLAAGGIRIQGS
                     KVAATQQANIQAAGFLPAPAAEELQEGRLQSAIDISGVFDTFEYGQQGSDKYGYAIFS
                     RPSEISGKTGVTLSAPNANENSRISLSAANIEA"
BASE COUNT         3093 a         2447 c         2693 g         2703 t
ORIGIN      
        1 aatgactgaa accggagaaa tgacgaaatt gaagcgtgtg gaaatgtgtc ggaaatcgct
       61 gaagccggat aaactagatt cccgcttttg cgggaatgac gggattttag gtttttgttt
      121 tcgtgggaat ggatgggccc aaagccgtcc gaaccaaaaa aaaccgccgc tttcagacgg
      181 catcaaaaaa ccgcaggcac gatgcctgcg gtttgccgtt tgcgcttcag gggagcaggg
      241 ggattgcgcc caagccgtgt gtttctttca gtccgaacat gatgttcata ttttgcaccg
      301 cctgacccgc cgcgcctttg acgaggttgt cgatgacgga aaggacgacc cacacatcgg
      361 attgcgccgc ctgttggatg ctgatgcggc agaggtttgc gccgcgcacg ctgcgggttt
      421 ctggtgtcga accggcgggc aggatgtcca cgaacaggct gtcgcggtaa tagtcgcgca
      481 ggatggtttc ggggcagatg ccgtctgaaa ggtggaggta aacggtggcg tgcataccgc
      541 gtatcatcgg cgcgaggtgc ggcgtgaaca cgaatccttc ggcgatgccg tcctgaagcc
      601 cggcgatggt ctgcctgatt tcgggcaggt ggcggtgtcc ggctatgccg taggctttga
      661 agttgtcgcc gacttcgcac aacagcgaac cgacattgcc tttcctgccc gcgccggaca
      721 cgccggattt gcagtcggca atcagcggca taccgggctt cagacggcat tgccgcaaca
      781 gcggcacgag cggcagggat acgcaggtcg ggtagcagcc ggggttggcg acgaggcgcg
      841 cctgtgcgac ggcttcgcgg ttgagttcgc tcaatccgta cacggcttgg gaaacgaggc
      901 cgggggcggc gtggggcatg ccgtaccagt gttcccaggt cggaatgtcc catatgcgga
      961 agtcggcgga aaggtcgatg acgcgcacgc cctgttcaat caggcgcggc gcgtctttca
     1021 tggcgatgcc gttgggcgtg gcgaagaaga cgatgtcgca ttgttccaaa cctgcctcgt
     1081 cgggcgtttg gaaggcgagg ccgtacacgc cgcgcaaact cggaaagtaa tcggcaactg
     1141 cggttcccgc ttcgctgcgg ctggttacgg cggcgacttc gacatcggga tgggcggcaa
     1201 gcaggcgcag cagttccacg ccggtgtagc ccgtcgcgcc gacaatgccg actttgattt
     1261 ttttactcat ggtttttcct ttgtgtggtt ggcgggtatg ccgtccgaac gctgtccgac
     1321 ggggttttga ttggcggcgg aaggacggta cacaaagcgt ttgaaaagcg tgtctaattt
     1381 aatggcatcc gcctctgttt ttaaaaccca gccctgccgt ccggaataaa cataaccgta
     1441 ggcgcgaaag ccggcaggat atttcggtgc ctgccccaaa cccaaaccgt atgcggcgaa
     1501 agcggtggtc gtggagaagg aaagcaggag gaggacgagg gttttcataa ggttccaaac
     1561 cgaacggggc gatgaagccc gattatagca aaaggtcgtc tgaaaaccgt tttcagacga
     1621 ccttttattt aattacaata aaaatgttaa caacaaaaaa caaaccgctt ttttccgttt
     1681 ggagacaaat ttttaactaa aattgtcaac aattccttga cgcacacaca aaaaaaactt
     1741 taatatttgt aaatatatgt aacattataa attttaaata ttttctgagt aaggggaagt
     1801 aatgagcatc catctcgact tcggcattag tcctaaaacg ttccgacaga cttaatctgt
     1861 atcaaaagcc caagctcttt aaaggagcgg ttcggaatct cgaagccgca tcttggaaag
     1921 atatcaacga gatataccaa cgagcagacc caaccgcacc gctgttttat ctgcgtaaaa
     1981 aaggtgcaat tgttcctaaa gaagaatacg tcgaaagttt cgacgctttg ggcaaaactc
     2041 gctaccgttt tattaaatcc gttatctacg aacatatgaa gaatggtgcg tcgttagtct
     2101 ataaccatat taacaacgag ccgttttcag atcatatttc ccgtcaagtc gcccgccttg
     2161 ccggcgcaca tactattgtt agtgggtatc ttgcttttgg cagcgacgaa tcttataaaa
     2221 accattggga cacccgcgat gtgtatgcca tccagctttt cggcaagaaa cgttggcaac
     2281 ttactgcccc tgatttccct atgccattgt atatgcaaca gactaaagat actgatattt
     2341 ccattcctga acatatcgat atggatatta tccttgaagc aggtgatgtc ctctacatcc
     2401 cgcgcggttg gtggcacaga cctatcccgc tcggctgtga aaccttccac ctcgctgtcg
     2461 gtacctttcc gcccaacggc tataattacc tcgagtggct aatgaagaaa ttccccacca
     2521 tagaaagtct gcgccacagt ttctcagact gggagcaaga taggacgcgt atcaacgata
     2581 ctgccgcaca aattgctgcc atgattgccg accccgtcaa ttatgaagcc ttcagtgaag
     2641 actttctcgg caaagaacgt accgataccg cttttcatct cgaacagttc gcgaatccca
     2701 acgctactcc gctttcagac gacgtcaggt tgagattaaa tgccaataat ttggatacgt
     2761 tggaaaaggg atatttgatt gggaatggga tgaagataag cgtagatgag ttggggaaaa
     2821 aagttttaga acacatcggt aagaatgaac cgttattgtt gaaaaatcta ctggttaact
     2881 tcaatcaggg aaaatatgaa gaagttagga agttgattta tcagttgata gagttagatt
     2941 ttctggaaat tttgtgaggg attctatgaa aaactggaag caatttacat ttttcgtaat
     3001 attagtaata gcttgttatc aagtgctata ttttttatca gatatgtttc ttctcgacta
     3061 cattaacaaa tatagttgga atttgaattt tattcagggt actttgaatt ttttttcaat
     3121 atatctgcca tatgtttttg ttagccgaat ttttaggaat accaaccaag aaaaggagta
     3181 taaaaatgat tgaacttcaa cttcatgaat tgaagctggt ttcaggggga ggtcctgtaa
     3241 cagacaatat agctggaaat gtagctaatg ctgccacaac caaaggaggt cccacatggg
     3301 gggatttggt tgcaatacct gctgccgcag cggcagttta ttatctgccg aaaaatgctt
     3361 acggtgctgc tggtgcaaat ggtgtataca atgtgactcg tgattgggta aatgatgccg
     3421 ttaatgcacc tccttataac ggaagaccaa tctttgagat tgaacatgga ttaactgctc
     3481 ccgcaacaaa agcagataaa tcaggaaacg gctacactga cggtacagat tactgctgat
     3541 atttctcatt gttcagacga tctctagggg tcgtctgaaa ctttcttaac ttcaatttta
     3601 tgaatagacc caagcaaccc ttcttccgtc ccgaagtcgc cgttgcccgc caaaccagcc
     3661 tgacgggtaa agtgattctg acacgaccgt tgtcattttc cctatggacg acatttgcat
     3721 cgatatctgc gttattgatt atcctgtttt tgatatttgg taactatacg cgaaagacaa
     3781 cagcggaggg acaaatttta cctgcatcag gcgtaatcag ggtgtatgca ccggatacgg
     3841 ggacaattac agcgaaattc gtggaagatg gagaaaaggt taaggctggc gacaagctat
     3901 ttgcgctttc gacctcacgt ttcggcgcag gaggtagcgt gcagcagcag ttgaaaacgg
     3961 aggcagtttt gaagaaaacg ttggcagaac aggaactggg tcgtctgaag ctgatacacg
     4021 ggaatgaaac gcgcagcctt aaagcaactg tcgaacgttt ggaaaaccag aaactccata
     4081 tttcgcaaca gatagacggt cagaaaaggc gcattagact tgcggaagat cagtggcaaa
     4141 aacggcactg ggcagacagg aattgtcggg attgggcatg gtatcctccg atttggcgaa
     4201 gagcaacgaa cctgtttatc tcgtgaaaat aaaacccgac aaaccaacca tcactgcata
     4261 cggtgaggaa aaaccgctgc aaatcggcat gacgttggaa gcagacatcc tgcacgagaa
     4321 acggcggctg tacgaatggg tattggagct gatttatagt atgtcgggca aactgtaaga
     4381 cttgaggctg aaagataaag aagttgtctg aaaccttttc agacgaccag aagacaataa
     4441 aaaacacaaa cttcaaaact gcctgaaacc atcccctttt acaggcactc cgtttgtaaa
     4501 agcaaggata gggcatctgc ccttttgatt gtttgattaa cgatacaagg agtttcaaaa
     4561 tgagagtttt atagtggatt aacaaaaacc agtacagcgt tgcctcgcct tgccgtacca
     4621 tttgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac tatatgtgtt
     4681 catgaaatga cttgggtcgg aggctcaggt aatgcgcaac aaagctcata ttattgcgaa
     4741 atttgcgaat ctgcagggct taacgatacg ggaaatcctg ataaatcttt aggattgcca
     4801 aacaatacgt tcagtaatcc gcctggttgg ggagctacaa tcggagcttt agcaggtagc
     4861 cgcataggga tgcctgaatt tggtacgttt gcgagccatg ccattgaaaa tttcgactgg
     4921 tcatggtatc gacgttatag ggaaattgcc gaaacgattg aacgagaata ttcaggcggt
     4981 ttgccttaat agttgaggag gtcatgatgt ttgccaaaca ttatcaattc atcgcactcg
     5041 gcatcatgct gcttctttat atgttgattc tctatacgac cgatttttcc aatctgacgt
     5101 attggatgct gttttttatc tgttttatta caggaaaaat attagctcgt ttgttagaga
     5161 aaagctttaa ataaaatagc agctagtcgc aaaaggtcgt ctgaaacctt ttcaggcggc
     5221 ctttctaaaa tacatccaac ttcctaatcc ctatttttca aaaaggaaat ctatgcccca
     5281 tctgcaaaac ctgtctttgg gcttaaagaa aaagctgcct gttatcctgc aaacagaaat
     5341 atcagaatgc ggcttggcat gtctggcggc tgtggcggga tttcatggtt tccatacgaa
     5401 tttacgcgca ctgcgttcaa aatactgtcc gagacctttg caaaattccc caaaatcccc
     5461 taaatgtctt ggtgggaatt ttgcaaaggt ctcattctat aactgtaaat acttttaaat
     5521 ttatgacaaa atagtaaata ttgctaaaat aatattgatg tcatgaaatt ttttcctgct
     5581 ccatgtctgt tggttatcct ggctgtcata ccccttaaaa ccttagctgc cgatgaaaac
     5641 gatgcagaac ttatccgttc catgcagcgt cagcagcaca tagatgctga attgttaact
     5701 gatgcaaatg tccgtttcga gcaaccattg gagaagaaca attatgtcct gagtgaagat
     5761 gaaacaccgt gtactcgggt aaattacatt agtttagatg ataagacggc gcgcaaattt
     5821 tcttttcttc cttctgtgct catgaaagaa acagctttta aaactgggat gtgtttaggt
     5881 tccaataatt tgagcaggct acaaaaagct gcgcaacaga tactgatcgt gcgtggctac
     5941 ctattatcca accacagaat atggattcgg gaattctgaa attacgggta tcagcaggcg
     6001 aaatagggga tatccgctat gaagaaaaac gggatgggaa gtctgccgaa ggcagtatta
     6061 gtacattcaa taacaaattt cccttatata ggaacaaaat tctcaatctt cgcgatgtag
     6121 agcagggctt ggaaaacctg cgtcgtttgt cgagtgttaa aacagatatt cagattatac
     6181 cgtccgaaga agaaggcaaa agcgatttac agatcaaatg gcagcagaat aaacccatac
     6241 ggttcagtat cggtatagat gatgcgggcg gcaaaacgac cggcaaatat caaggaaatg
     6301 tcgctttatc gttcgataac cctttgggct taagcgattt gttttatgtt tcatatggac
     6361 gcggtttggc gcacaaaacg gacttgactg atgccaccgg tacggaaact gcaagcggat
     6421 ccagaagtta cagcgtgcat tattcggtgc ccgtaaaaaa atggctgttt tcttttaatc
     6481 acaatggaca tcgttaccac gaagcaaccg aaggctattc cgtcaattac gattacaacg
     6541 gcaaacaata tcagagcagc ctggccgccg agcgcatgct ttggcgtaac agacttcata
     6601 aaacttcagt cggaatgaaa ttatggacac gccaaaccta taaatacatc gacgatgccg
     6661 aaatcgaagt gcaacgccgc cgctctgcag gctgggaagc cgaattgcgc caccgtgctt
     6721 acctcaaccg ttggcagctt gacggcaagt tgtcttacaa acgcgggacc ggcatgcgcc
     6781 aaagtatgcc tgcaccggaa gaaaacggcg gcgatattct tccaggtaca tctcgtatga
     6841 aaatcattac tgccggtttg gacgcagccg ccccatttat tttaggcaaa cagcagtttt
     6901 tctacgcaac cgccattcaa gctcaatgga acaaaacgcc gttggttgcc caagataaat
     6961 tgtcaatcgg cagccgctac accgttcgcg gatttgatgg ggagcagagt cttttcggag
     7021 agcgaggttt ctactggcag aatactttaa cttggtattt tcatccgaac catcagttct
     7081 atctcggtgc ggactatggc cgcgtatctg gcgaaagtgc acaatatgta tcgggcacgc
     7141 agctgatggg tgcagtggtc ggcttcagag gagggcataa agtaggcggt atgtttgctt
     7201 atgatctgtt tgccggcaag ccgcttcata aacccaaagg ctttcagacg accaacaccg
     7261 tttacggctt caacttgaat tacagtttct aacctctgaa ttttttactg atatttagac
     7321 ggtctttcct tatcctcaga ccgtcaaact ttacctacgt acttggcgcg cagtacgttc
     7381 atcttcaaaa tggaatagac atgaataaag gtttacatcg cattatcttt agtaaaaagc
     7441 acagcaccat ggttgcagta gccgaaactg ccaacagcca gggcaaaggt aaacaggcag
     7501 gcagttcggt ttctgtttca ctgaaaactt caggcgacct ttgcggcaaa ctcaaaacca
     7561 cccttaaaac cttggtctgc tctttggttt ccctgagtat ggtattgcct gcccatgccc
     7621 aaattaccac cgacaaatca gcacctaaaa accagcaggt cgttatcctt aaaaccaaca
     7681 ctggtgcccc cttggtgaat atccaaactc cgaatggacg cggattgagc cacaaccgct
     7741 atacgcagtt tgatgtcgac gctaaaggtg ctgtactgaa caacgatcgc aacaacaacc
     7801 cgtttctggc caaaggcagt gcgcagttga ttttgaacga ggtgcgcggt gcggccagca
     7861 aactcaatgg catcgttacc gtaggtggtc aaaaggccga tgtgattatc gccaacccca
     7921 acggcattac cgtgaacggc ggcggcttta aaaacgtcgg ccgcggtatc ttaactaccg
     7981 gtgcgcccca aatcggcaaa gacggtgcac tgacaggatt tgatgtgcgt caaggcacat
     8041 tgaccgtagg agcagcaggt tggaatgata aaggcggagc cgactacacc ggggtacttg
     8101 ctcgtgcagt tgctttgcag gggaaattac agggtaaaaa cctggcggtt tctaccggtc
     8161 ctcagaaagt agattacgcc agcggcgaaa tcagtgcagg tacggcagcg ggtacgaaac
     8221 cgactattgc ccttgatact accgcactgg gcggtatgta cgcagacagc atcacactga
     8281 ttgccaatga aaaaggcgta ggcgtcaaaa atgccggcac actcgaagcg gccaagcaat
     8341 tgattgtgac ttcgtcaggc cgcattgaaa acagcggccg catcgccacc actgccgacg
     8401 gcaccgaagc ttcaccgact tatctctcca tcgaaaccac cgaaaaagga gcggcaggca
     8461 catttatctc caatggtggt cggatcgaga gcaaaggctt attggttatt gagacgggag
     8521 aagatatcag cttgcgtaac ggagccgtgg tgcagaataa cggcagtcgc ccagctacca
     8581 cggtattaaa tgctggtcat aatttggtga ttgagagtaa aactaatgtg aacaatgcca
     8641 aaggctcggc taatctgtcg gccggcggtc gtactacgat caatgatgct actattcaag
     8701 cgggcagttc cgtgtacagc tccaccaaag gcgatactga attgggtgaa aatacccgta
     8761 ttattgctga aaacgtaacc gtattgtcca acggcagtat tggcagtgct gctgtaattg
     8821 aggctaaaga cactgcacac attgaatcgg gcaaaccgct ttctttagaa acctcgaccg
     8881 ttgcctccaa catccgtttg aacaacggta acattaaagg cggaaagcag gtggtactga
     8941 tggctgatgg cgacattcag gcaaaagcct ccaatctgaa tgcatccggc aatctgtata
     9001 ttcatgcagg taaggatctg gatttgaatg ccgataaaga cttatcaaca caaagtatca
     9061 gcctgagggc agacaacacc gccctcatca gtagcaacgg taacaccttg actgcagaaa
     9121 agaatctgga tattcaggca ggtagcttga gtgtgcgtca aagtaatctg caatccagtg
     9181 gcggtaatgt gcagatgagc gcgactaaag gcaacatcag cttgaatcag agttggataa
     9241 atgccagtca gaatattgat acggcagcac ttcaaggcaa tattatttca gacggtctga
     9301 ctgctgttgc cgaagttgga cgcgtatctc ttcttgccaa cggcaatgtt gatttcaacg
     9361 gtctaaatac cttgattgcg gaaggagaca ttaatgctgg ttcagtcggt aaaggccgtc
     9421 tgaaaatgga caataccgat atttatgctt ctgcaggcga tgtgaaactg gttgccggag
     9481 gtcaattaga tttaggcaac ggcaccgtta acggcggtca tatcagctta gacagcaata
     9541 aaggcagcat ggtggtgcag gatgtacacc tgaatgcccg cgcatcactg aaagtggatg
     9601 cggatcaaac tttaaccatt aataacagca agctcaattc cggtcacaat acccagatta
     9661 atacaaatca tggtcatatg acgcttaatc agcttgatgc tcattcacgt cgtcatatga
     9721 gtatcagtgc acagggtaaa ggcaaaggaa aagacagcgg tcaaatttta caaaacgacc
     9781 agcaaaacag taaaagtact ttggcggcag atggtgtatt gtcattgaac agcagcgcat
     9841 tacaggtttt ggacaatact accctgcgcg gtggcgcgat aaacatcaaa gctggcggag
     9901 gcatcatcaa acggggctat atcgattggg aaacccaaga tacggctact atgcgttcag
     9961 cggaactgaa accactgtct ggtatgatgt cgatagaatc gggcggtgat aaccctttaa
    10021 ccgttgaacc cggtaaccgt atcgtttctg caggtgattt ggccgtgaac cacaacggca
    10081 cattccaaat cagtgccaga gcaggaaata acggcaatcc gagtgcgcaa acagccagcg
    10141 tttcagctaa aggcaatatc gggattgtgg cgggagaggt ggatattgat gcagcaaata
    10201 ttgccgcagg gaaagatttg gctttagtgg caactaaagg gaatatttca ctaaacagta
    10261 ttaggaatac gtttagtaac tatcaattga aaacagataa acacaatatc acacagcaac
    10321 ttactgatgt agagcaggag cttagtaagt taacgagcga tcctaaatat cgtaaagcac
    10381 aggatcttcc acaaatgttg aggcgtaaat ataagaggcg tgacaaagta ttcggtgata
    10441 gtgaggccag attacgtggt ttacgagcag agataaatgc tgctgatgag gcttgggcag
    10501 aactccaatc cccagtaaaa gcgttacttg aacgtaaaca attgttacaa caagcccttt
    10561 taacagtttc ccaaccgggt agtggtcacg aaaaccaagg tagcaccctt agcggtcaaa
    10621 atatcaaact gctcgctgca ggtggtatcc gtatccaggg ctccaaagtt gctgccaccc
    10681 aacaggcaaa tatccaagct gcaggatttt tacctgcacc agccgcagag gaactgcaag
    10741 aaggtcgact tcaatcagcc attgacatca gcggtgtatt tgatactttt gaatatggtc
    10801 agcaaggcag cgataaatac ggctatgcca ttttcagcag gccatctgaa atttcaggaa
    10861 aaacaggtgt taccctctct gcaccaaatg ccaatgagaa cagccgcatc agtctgagtg
    10921 cggcaaacat cgaagc
//
LOCUS       DAXHKG010000062        10935 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.062, whole genome shotgun sequence.
ACCESSION   DAXHKG010000062 DAXHKG010000000
VERSION     DAXHKG010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10935
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.062"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(127..1989)
                     /gene="hscA"
                     /locus_tag="ACFMWP_001221"
     CDS             complement(127..1989)
                     /gene="hscA"
                     /locus_tag="ACFMWP_001221"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HFC5891823.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAKELQQI
                     RQGIADLQGRLKDGKAEDIRSAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            2160..3032
                     /gene="hpnD"
                     /locus_tag="ACFMWP_001222"
     CDS             2160..3032
                     /gene="hpnD"
                     /locus_tag="ACFMWP_001222"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HFC5891824.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLLRVRYGSFEELKLYCRRVAGVVGCLIARILGFSDDQTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            3111..4424
                     /gene="hpnE"
                     /locus_tag="ACFMWP_001223"
     CDS             3111..4424
                     /gene="hpnE"
                     /locus_tag="ACFMWP_001223"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HFC5891825.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            4508..5227
                     /locus_tag="ACFMWP_001224"
     CDS             4508..5227
                     /locus_tag="ACFMWP_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC5891826.1"
                     /translation="MATLTDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGYPEPFAICFDLISAEEKEFEHFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            5392..6063
                     /locus_tag="ACFMWP_001225"
     CDS             5392..6063
                     /locus_tag="ACFMWP_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HFC5891827.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            6073..6441
                     /locus_tag="ACFMWP_001226"
     CDS             6073..6441
                     /locus_tag="ACFMWP_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HFC5891828.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGDNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            6438..7085
                     /locus_tag="ACFMWP_001227"
     CDS             6438..7085
                     /locus_tag="ACFMWP_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HFC5891829.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            7374..8457
                     /locus_tag="ACFMWP_001228"
                     /pseudo
     CDS             7374..8457
                     /locus_tag="ACFMWP_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519957.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
     gene            complement(8627..8836)
                     /locus_tag="ACFMWP_001229"
     CDS             complement(8627..8836)
                     /locus_tag="ACFMWP_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891830.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(8833..9129)
                     /locus_tag="ACFMWP_001230"
     CDS             complement(8833..9129)
                     /locus_tag="ACFMWP_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HFC5891831.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            complement(9108..9713)
                     /locus_tag="ACFMWP_001231"
     CDS             complement(9108..9713)
                     /locus_tag="ACFMWP_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891832.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQTQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            9798..10076
                     /locus_tag="ACFMWP_001232"
     CDS             9798..10076
                     /locus_tag="ACFMWP_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HFC5891833.1"
                     /translation="MIVSFKHKGLERFFKTGSLSGIQAGHSVKLNLLLTALNAAQTPS
                     DMAVPSWNLHPLKGSLSGHWAVKVNGNWRLTFRFNDGNAEVVDYQDYH"
     gene            10084..10395
                     /locus_tag="ACFMWP_001233"
     CDS             10084..10395
                     /locus_tag="ACFMWP_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HFC5891834.1"
                     /translation="MKMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQS
                     SITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMQTGAR
                     A"
BASE COUNT         2353 a         3091 c         3007 g         2484 t
ORIGIN      
        1 acgcccttga tgacggtttt catcgaatag acaatgcctg acttttccat atcgatgttt
       61 ttcaagtgtt ttcgagcctt cagacggcat caggttatat ctatgccgtc tgaaaccgtt
      121 taagtatcaa atattatcga cactctggcc tgtcaatgcg cgttggatat tgcggttcat
      181 gcgtttggcg gcgaagttgt cggtgctgcg gctgagtttg gcgacggcgg agcggatgtc
      241 ttcggctttt ccgtctttca gacggccttg caaatcggcg atgccttgcc ggatctgttg
      301 caattctttg gcatccagta aatcgctgtc caactcgagg gcggcgttga cggcatcggt
      361 caggctttcg gcttcgacta cggcttcggc gcgggcgcgt gccgccatat cttcggcggc
      421 gttgtccata ctgtctttaa gcattcgggt aatcgcgccg tcgtccaagc cgtaggaagg
      481 tttgacttcg atttgcgcct gtacgccggt gctttgttct tgggcggaaa cggacagcag
      541 cccgtccgca tcgatttgga aggttacgcg gatacgcgcc gcacccgccg ccatcggtgg
      601 aatgccgcgc agggtgaatt tggcaaggct gcggcagtca gaaacgagct cgcgctcgcc
      661 ttgcacgacg tgtatcgtca tcgcggtttg accgtctttg aaggtggtaa agtcctgcgc
      721 gcgcgcggtg gggatggtgg aattgcgcgg gatgattttt tccgccaagc cgccgtaggt
      781 ttccaaaccg agcgacaaag gtgtaacgtc cagcagcagc cattcgccgt cggttttgtt
      841 gcctgcgagg acgtttgcct gtatggcggc gccgagcgcg acgacttcgt cgggattgag
      901 gttgttcagc ggggtttgac caaagaaagt ggcaaccgct tgttgaacgt gcagcatacg
      961 ggtcgaaccg ccgaccataa tcacgccttt gacttcgttt ttaccgacac cggcatcttt
     1021 caacgcctgt gtgaccggtt cgagcgtttt catcaccaaa tgctgcgtca ggttgtggaa
     1081 ctcggcgcga ctgatgcttg tgtcgattgc catgccgtct gaaagcgtcg cctgaatgcg
     1141 cgcttcggtt tgcgtggtta attgttcttt ggcggcgcgg acgagcgaga gcaggagttg
     1201 gctgtcttgt tcgttgagtt gggagagtcc gttttgttcg agcaggcggc agaacaggcg
     1261 gtggtcgaaa tcgtcgccgc ccaacgcgct gttgccgccg gtggctttga cttcaaacag
     1321 tcctttggtc agttgcaata cggatacgtc gaatgtgccg ccccctaagt cgtacacgac
     1381 aaacgtgcct tccgaggcgt tgtccagccc gtaggcgatt gcggcagcgg tgggttcgtt
     1441 gagcaggcgc aatacgttca aacccgccag acgcgcggca tctttggtgg cttggcgttg
     1501 ggcatcatcg aaataggcag ggacggtaat caccacgccg accaaatcgc cgcccaaggt
     1561 ttcttcggcg cgcgatttaa gggttttgag gatttccgcc gacacttcga caggcgtttt
     1621 caccccctgc cgcgtatgca gttcgataac gcgttgattg tcgccgaaac ggtaaggcag
     1681 gtaatgcgta ttttgatgca gatcggcaag cgtccgcccg ataaggcgtt tggcggagct
     1741 gacggtgttc agcgggtcgg ttttttgggc ggacagggcg gttttgccga cttcaatgcc
     1801 gccgttttcc agatagcgga cgacggaagg cagggtaacg cgcccttcgg catcgggcag
     1861 acaggcggca ctgccgctgc ggacggtggc gaccaagctg ttggtcgtac ccaaatcgat
     1921 gcctgccgcc aaacggtgcc ggtgcggggc ggcggacata cccggttctg aaatctgcaa
     1981 aagagccata aattctgcct gtcggtgcgg tgtgtaaagg aaggaaagcg gcattttaac
     2041 agaatttgcg ccgatagttg agcaaaccgc taaggattgg gtcgtgccgc cgaaattgcc
     2101 ctctaccgcc aaatgccgat aaaatccgcc tttcccgccc atcattagga atataaatcg
     2161 tgaaaggact cgactattgc cgccaaaaag cagaagaaag ccgctccagt tttttgtcgg
     2221 gcttccgttt cctgactcag gaaaaacggg atgcggtaac ggttttatat gctttttgcc
     2281 gcgaattgga cgatgtggtt gacgaatgtt ccaaccccga tgttgcacag gcgacattga
     2341 actggtggcg cggcgatttg gacaaggtat tcggcggcgc gatgccggaa caccccgtca
     2401 atcaggcctt gcggcaagtt aaggaaacct tcaagctgcc gaaatatgaa ctggaagcct
     2461 taatcgacgg gatgcagatg gatttgcttc gggtgcgtta cggcagtttt gaagaattaa
     2521 aactgtattg ccgccgcgtc gcgggcgtgg tcggctgcct gattgcgcgg attttggggt
     2581 tttcagacga ccaaacgctg gaatacgccg acaagatggg acttgcgctg caactgacca
     2641 acatcatccg cgatgtcggc gaagacgcgc gcaggggacg gatttacctg ccgatggagg
     2701 aaatgcggcg gtttgatgtc cccgcaagcg tgattttgca atgcagcccg acgggcaatt
     2761 ttgccgaatt gatggcgttc caaatcaaac gcgcccgtga aacctaccgc gaagccgtat
     2821 cgctgctgcc tgatgccgat aaaaaagccc aaaaagtcgg actggtcatg gcggcggttt
     2881 attacgcgct tttaaacgaa atcgaccggg acggcgcgca aaacgtcctc aaatacaaaa
     2941 tcgccctccc ttcgccgcgc aaaaaacgca ttgccctgaa aacctggtta ttcggattca
     3001 aaccgcgccc cggcacgccg gaacgggcat aaggcgcata ccgcccgccc ttcaggaaaa
     3061 cccaaccccc gccgccccga aaaacggggt ttcaaccatt ggaggaataa atgatgaaca
     3121 cgccgcatcc gcgcccgaaa atcgccgtca tcggcgcagg ctgggcagga ctgtccgccg
     3181 ccgtcacctt ggcgcggcac gccgacgtta ccctgtttga agccggccgg caggcgggcg
     3241 gcagggcgcg cacactggcc ggaaataccg acggtttcgg ttttttggac aacgggcagc
     3301 acattttgct cggcgcatac cggggcgtgt tgcgcctgat gaaaaccatc ggttcggatc
     3361 cccgtgccgc ctttttgcgc gtaccgctgc actggcatat gcacggcggt ttgcagttcc
     3421 gcgccctccc cctgcccgcg ccgctgcata ttttgggcgg cgtgctgctt gcccggcgtg
     3481 caccgactgc attcaaagcc aaactgcttg ccgatatgtc cgatttgcag aagtccgcac
     3541 gcctcggaca gcccgacacg acagttgcac aatggctgaa acagcggaac gtgccgcgtg
     3601 ccgccgtgat gcagttttgg cagccgctgg tgtggggtgc gctcaacacg cctttggaaa
     3661 ccgcaagcct gcgcgtgttg tgcaacgttt tgtccgacgg cgtgctgacg aaaaaatccg
     3721 gcagcgacta tctcctaccc aagcaggatt tgggcgcaat cgtcgccgaa cccgccttgg
     3781 cggagcttca acggctcggc gcggacatcc gcctcgaaac gcgcgtatgc cgtctgaacc
     3841 ccctcccgga cgggaaagtg ctcgtcaacg gcgaagcttt cgatgccgcc gtccccgcca
     3901 ccgcgcccta ccacgccgcc gcgctcctgc ccgaaggcac gcccgaacac gttcagacgg
     3961 catatcaaaa ccttcgctat cacgccatca ccaccgtcta tctgcgctac gccgaacccg
     4021 tccgcctgcc cgccccgctg accggccttg ccgacggcac ggtgcaatgg ctgctttgcc
     4081 ggggcaggct cggactgcct gaaaacgaag tgtccgccgt catcagcgtt tccgaccgcg
     4141 tcggcgcgtt tgcaaaccgg gcgtgggcgg acaaagccca cgccgacctc aaacgcatcc
     4201 ttccgcattt gggcgaaccc gaagccgtgc gcgtcatcac cgaaaaacgc gccacaaccg
     4261 cagccgatgc cccaccaccg gatttgtcgt ggctgcaccg gcaccgcatc ttccccgccg
     4321 gcgactacct ccacccagac taccccgcca cgctcgaagc cgccgtacaa tcaggtttcg
     4381 cttccgcgga agcctgcctg caaagcctga acgatgccgt ctgaaaacgc cggccggcat
     4441 caggacgctt tacaaggtgc ggcaaaacgc taaaataccc ccgaccgacc accaaaaagg
     4501 aaaaagtatg gcgacactga ccgacaaaac catcttagtt accggcgcat cgcaagggct
     4561 gggcgaacag gttgccaaag cctatgcggc ggcaggcgca accgtgattc tggtggcacg
     4621 ccatcagaaa aaactggaaa aagtctatga cgcgattgtc gaagccggat accccgaacc
     4681 attcgccatc tgctttgacc ttattagcgc ggaagaaaaa gaatttgaac atttcgccgc
     4741 caccattgcc gaagccacgc aaggcaaact ggacggcatc gtccactgcg ccggctattt
     4801 ttacgccctc tcgccgctgg atttccaaac cgtcgccgaa tgggtcaacc aataccgcat
     4861 caacaccgtc gcacctatgg ggctgacccg cgccctgttc ccgctgctga agcagtcgcc
     4921 cgacgcgtcc gtcatcttcg tcggcgaaag ccacggcgaa acacccaaag cctactgggg
     4981 cggcttcggc gcgtccaaag ccgcgttgaa ctacctgtgc aaagtcgccg ccgacgaatg
     5041 ggaacgcttc ggcaacctgc gcgccaacgt cctcgtcccc ggccccatca attccccgca
     5101 acgcatcaaa tcccatccgg gcgaagccaa aagcgaacgc aaaagctacg gggacgtgct
     5161 gcccgcattt gtctggtggg caagtgccga aagcaaaggg cggagtggcg aaatcgttta
     5221 cctctaaatc cggaaaaggc aggcatcccg cccgcgccgc gattccgttt gaaaaatatc
     5281 cgtaccttcc gcgcgcatcc gtcccgcaca gacaaacacc ttgacttaaa tttacataag
     5341 gacaataatg acaacccgtt atttccttaa cttgacctta gggtaaattt tatgaaaacc
     5401 gtttccaccg ccgttgtcct tgccgccgct gccgtttcac tgaccggctg tgcgaccgaa
     5461 tcctcacgca gtctcgaggt agagaaagtc gcctcctaca atacgcaata tcacggtgtt
     5521 cgtaccccga tttccgtcgg aacattcgac aaccgctcca gcttccaaaa aggcattttc
     5581 tccgacgggg aagaccgttt gggcagccag gcaaaaacca ttctggtaac gcacctgcaa
     5641 cagaccaacc gcttcaacgt actgaaccgc accaatttga acgcattaaa acaggaatcc
     5701 ggcatttccg gcaaagcgca taacctgaaa ggcgcagatt atgtcgttac cggcgatgta
     5761 accgaattcg gacgcagaga tgtcggcgat catcagctct tcggcatttt gggtcgcggc
     5821 aaatcgcaaa tcgcctatgc aaaagtggct ctgaatatcg tcaacgtcaa tacttccgaa
     5881 atcgtctatt ccgcacaggg cgcgggcgaa tacgcacttt ccaaccgtga aatcatcggt
     5941 ttcggcggca cttccggcta cgatgcgact ttgaacggca aagttttaga cttggcaatc
     6001 cgcgaagccg tcaacagcct ggttcaggct gttgacaacg gcgcatggca acccaaccgt
     6061 taaggagaaa tgatgaatcc gaaaaccttg agccgtttgt cgctgtgtgc ggcggtcttg
     6121 gctctgaccg cctgcggcga caacgggcaa aaatccctgt attattacgg cggctatccc
     6181 gataccgtct atgaaggttt gaaaaacgac gacacttcgt tgggcaagca gaccgaaaag
     6241 atggaaaaat actttgtgga agccggcaac aaaaaaatga atgccgcccc gggtgcgcac
     6301 gcccatctgg gactgctgct ttcccgttcg ggagacaaag agggcgcgtt ccgccagttt
     6361 gaagaagaga aaaggctgtt tcccgaatcg ggcgtattta tggacttcct gatgaaaacc
     6421 ggtaaaggag gcaagcgatg aaacctttga ttttagggct tgccgccgtg ttggcgctgt
     6481 ctgcctgcca agttcaaaaa gcgcccgatt tcgactacac gtcattcaag gaaagcaaac
     6541 cggcttcaat tttggtggtt ccgccgctga acgaatcgcc cgatgtcaac ggaacatggg
     6601 gtgtactggc ttcgaccgcc gcgccgcttt ccgaagccgg ctattacgtc ttccccgccg
     6661 cagtcgtgga ggaaaccttc aaacaaaacg gcttgaccaa tgccgccgat attcacgccg
     6721 tccggccgga aaaactgcat cagattttcg gcaatgatgc ggttttgtac attacggtta
     6781 ccgaatacgg cacttcatat caaattttag acagcgtgac gaccgtatcc gccaaagcac
     6841 ggctggtcga ttcccgcaac ggaaaagagt tgtggtcggg ttcggccagc atccgcgaag
     6901 gcagcaacaa cagcaacagc ggcctgttgg gggctttggt cagcgcagtg gtcaatcaga
     6961 ttgccaacag cctgaccgac cgcggttatc aggtttccaa aaccgccgca tacaacctgc
     7021 tgtcgcccta ttctcacaac ggcatcttga aaggtccgag attcgtcgaa gagcagccca
     7081 aataagcata tgccgtctga acctctccga gcttcagacg gcatatgcga atcttgatac
     7141 ttgcaagccg caccgcccaa aatcgggcgg ccggtttcaa tatccgaaca aggttcgggt
     7201 tctgtatttt gcagaacccg aaccttttat tcaaatttaa acttaattcc ggcgtggttg
     7261 tatggtaaat taacacgcaa tatgccctga cctgcaaaac ttccccaaac ttcatcaaaa
     7321 aatcaactgt acccgtcttt ttcagacggc attgataccg taagaaattt cccatgcaga
     7381 aatggcaaac cgagctttat tccacaccgc tttggctttg tctgacactg aaaagcgcgg
     7441 tcaaagtctt gctgctgatt acggcgatga ttacgctggt gttaaccgaa atgcggctga
     7501 atgtgttgag tacctttatg tccaaagggc tttacgactc gatgcaggat ttgaaatgct
     7561 tcggcatttt ggatgtttgc tgcaatgaac gcgggcgtgg tgctgatacg ggcgtttaac
     7621 aacgtcgtca acgacttcct cgatcaaggc ttggcgatta aatggtcgga gcggctcaac
     7681 gaagtgctga cagcacgctg gcttgccgac aaaaactact accgcctgca aatgcgccgc
     7741 cacgcgccag acaacatcga ccagcgtatc caacaggacg cgcaggaatt tatcgcttcg
     7801 accatcgaat ttgtgcgcgg catggtcaat tcggtcgtta cttctctgga atttgccgtt
     7861 gttttgcggg gcttggctgg catcctgacc gtgttcggct tcgacattcc gcacggcatc
     7921 gtttggtttg tctatatatt tgtgattttg gcgaccttta tcgccatgtg gataggcaac
     7981 cctttgattc gttacaatta tgaaaacgaa aaactcaacg gcgactaccg ttattccctc
     8041 atccgcgtgc gcgaccacgc cgaaagcgtg gcgttttaca acggcgaaaa acatgaatac
     8101 gaccagcttt ccgaccgctt taaagccatt atccgcaacc gttggcgcat tgcgcggcaa
     8161 agcgtctgct taagcggctt taacgatatg ttcaccaacg gcatcaaact cttcccgatt
     8221 attttgcaag ctccgcgcct gtttgccgga caaatcaaaa tcggcgacat ccagcaaacc
     8281 gtccaagcct tcgcgcgact gcaaaacgcg ctttctttct ttcgaatgtt ctacaacaaa
     8341 ttcaccgcct accgcgcccg attggagcgt ctgtacggct ttttgctgag taccgaagaa
     8401 caacacagcg cgcggcaacc cgagattagc gaagtttcag acggcattgc actggaatgt
     8461 aaggcggcgg cagcttttgc acgaattggc ggcagctttt gcaccgccga agcgtaggaa
     8521 attgtattag cttttgcaca aatttatccc cgtttaatgg tctgttaaac ggggattatc
     8581 ttatgccttt aaaagtagta cgctacttgc ggtcagaact tataaatcag gtggtcgtcg
     8641 tagcttgaat tgctgttgat gtgctgctca cagtcaaggt ttggctgcct gcaaaacgct
     8701 cccatccggt caggcgcagt tctgccacga ggtcaagata agtaggcagt tcgctgcggg
     8761 tgccggagaa gaagacaaat ggcggccgca ccattgccat caggcgcaga aactctacca
     8821 tgccgaagta gttcatcgcg tccccttttc cccggcggcg cggctttggt tgaaccgcgc
     8881 gtcgtgctgc ctgcctttca gttcgctgat atacgcctgc cgacagtgtt ggcggtcgaa
     8941 aaacacgccg ttgatcaggg tgtataaaac cttccagcgg gttttgggct tttgggcgag
     9001 ccgcgcgccg cgataggtgc ggcttgagag ggtttcgtcc gccgcgccgc cggttagggc
     9061 gttgaacagt tggtcgatgg ctaccaacag gtggtaaacg tattttttca gccgatgttt
     9121 agcgtccatt cttcgatttc cttttccagc gcgtccaatc ctggcgcggt ttcgatggtg
     9181 ttcaatttgt cttcgagctg ctgccgcttt ccgataatcg cgccggcggc aacggccagg
     9241 cgggcggatt tttcgacaac tttttcaatc aaaacgtcca attccacgcc ccttgcggcg
     9301 gcgatttgcg ccagcatcgg ggtcggggcg ttgttgtccg cctgccgcgc gagggcttct
     9361 ttttcctgcc tgtaaaagct gtcgatttcc acttggggat agcccgccaa gaggctgttt
     9421 ttgagttcgt ccgcctttgc cgcgaggcgg aatgccgtgg cggttttttg ttcggcgaaa
     9481 cgggcggcgg cagcggcttc gccgatttcc catttcttgc cgtcccattc gtggtattcg
     9541 gacgggcgcg gcggggttaa aacggggcgg ccgtcggaat ctgcggcaat ctgcccgccc
     9601 tgcgtctgtc ctgccaaaag ggcggcgtat tcttcggcgc ggacggcaac cgcgccttcg
     9661 gggatgctgc ccaatgtgtc gtcgtaaaag ccgtttttga aatagatggt catttcgggg
     9721 tttccttttt tgtatatcgt cgctttacaa ttaaataaaa gttttgtatc ctttggcgat
     9781 acagacgggg tgggatgatg attgtttctt tcaaacacaa agggcttgaa cgctttttta
     9841 aaacaggctc gctatcgggc atccaagccg ggcattccgt caaactgaat ctgcttctaa
     9901 ccgcgctgaa tgccgcgcaa acgccttcgg atatggctgt gccgagttgg aatcttcatc
     9961 ccctcaaggg cagtttgtcg ggacattggg cggttaaagt caacggaaat tggcgtttga
    10021 cttttcgttt caacgacggc aatgccgaag ttgtcgatta tcaggattat cactaggaat
    10081 aatatgaaaa tgcacaatcc tgcccacccg ggccttgttt taaaagagta tattaacggt
    10141 gcaagcatta ccgatatagc gaaacgcctg ggtgtcagcc gggttgcctt atcgcgcatt
    10201 gtcaacgccc aatcttcgat tacgcccgag atggcggttc gtttaagcca actgctcaat
    10261 acttcgcctg atttttggct gaatatgcag gccggttatg atttgtggca aatcaggcaa
    10321 cgcaaaactt ttgatattgc gcccttattt cccgaaccgc ctttgtcttc gatgcaaaca
    10381 ggtgcaaggg cttaaccctg cggccgctgc ttatcgggcg cgcccgacta tcctttcccg
    10441 cgcggtttcg gccgtgcggt tttttgttgc cggtgccgtc cgaagggggc agcggctttt
    10501 tgcgcggtca ttcccgcctt tcgttattcc cgccactttc cgtcattccc gcgaaggcgg
    10561 gaatcccgaa acccctgccg ccgtcattcc cgcgcaggcg ggaatccagt ccgttcggtt
    10621 tcagccgttt ccgatagatt cctgccgcgt ttggggtctg gattcccgcc tgcgcgggaa
    10681 tgacggtggc gggggtttct gttttttccg atagattcct gccgcgttta ggggctggat
    10741 tcccgctttc gcgggaatga cgaaagcggc gggaatgacg aagagtggca ggattggcgg
    10801 ggcataggtt tcgggggatt ggcggcgcgg ccggtttcgg tcggattgct tggatcggcg
    10861 ggctgaagcc catctctaca gcccatctct acagcccatc tctacagccc gtctctacag
    10921 ccatctctac agccc
//
LOCUS       DAXHKG010000063        10571 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.063, whole genome shotgun sequence.
ACCESSION   DAXHKG010000063 DAXHKG010000000
VERSION     DAXHKG010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10571
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.063"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            153..1058
                     /locus_tag="ACFMWP_001234"
     CDS             153..1058
                     /locus_tag="ACFMWP_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC5891835.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            1104..1253
                     /locus_tag="ACFMWP_001235"
     CDS             1104..1253
                     /locus_tag="ACFMWP_001235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891836.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="ACFMWP_001236"
     CDS             complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="ACFMWP_001236"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HFC5891837.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRNKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFHSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="ACFMWP_001237"
     CDS             complement(2634..4427)
                     /gene="lepA"
                     /locus_tag="ACFMWP_001237"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HFC5891838.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(4570..5271)
                     /locus_tag="ACFMWP_001238"
     CDS             complement(4570..5271)
                     /locus_tag="ACFMWP_001238"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HFC5891839.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFTAYEGELAGK
                     RMVLALSGIGKVNAAVATAWIIREFAADCVINTGSAGGLGKGLKVGDVVIGTETAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDDLLVGKAKRAARTFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            5439..6569
                     /locus_tag="ACFMWP_001239"
     CDS             5439..6569
                     /locus_tag="ACFMWP_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC5891840.1"
                     /translation="MFTDENMTAKEELFAWLRHMNQNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGDISLQDALKNADSAHDLRLAVQLRSRRAQSSGPDLELL"
     gene            6604..7581
                     /locus_tag="ACFMWP_001240"
     CDS             6604..7581
                     /locus_tag="ACFMWP_001240"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HFC5891841.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKGIGKTEFARFAAQA
                     LLCENPSPDHRACGACASCHFFEQGSHPDFYEITPLSDESENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVVLIHPAESMNIQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            7585..7935
                     /locus_tag="ACFMWP_001241"
     CDS             7585..7935
                     /locus_tag="ACFMWP_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HFC5891842.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTIGGSRPTFTM"
     gene            7940..8719
                     /locus_tag="ACFMWP_001242"
     CDS             7940..8719
                     /locus_tag="ACFMWP_001242"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC5891843.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFAIAEAHEHIYCTIGVHPDSKEAEEFSVAEMVEAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDFGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRDQTLEQVAAYTTENFYRLFQKVPDMRAV"
     gene            8745..8960
                     /locus_tag="ACFMWP_001243"
     CDS             8745..8960
                     /locus_tag="ACFMWP_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HFC5891844.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYFRSQH"
     gene            9061..9372
                     /gene="grxD"
                     /locus_tag="ACFMWP_001244"
     CDS             9061..9372
                     /gene="grxD"
                     /locus_tag="ACFMWP_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HFC5891845.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            9478..10104
                     /gene="upp"
                     /locus_tag="ACFMWP_001245"
     CDS             9478..10104
                     /gene="upp"
                     /locus_tag="ACFMWP_001245"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HFC5891846.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            10127..10447
                     /locus_tag="ACFMWP_001246"
     CDS             10127..10447
                     /locus_tag="ACFMWP_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HFC5891847.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
BASE COUNT         2486 a         2693 c         2822 g         2570 t
ORIGIN      
        1 gggttttatc cggcaggacg gttttttgcc ccaacggaaa atagtcggcc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttag cacggttttt caggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg tcagcggttt ggtatcggga ctgatgctcg
      661 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gacggtggcg cttttccctt
      721 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
      781 atggcggcgc gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttacctcgg ttcgctgaaa cagcagtccg agccttgact ccgtccggca tcagattttc
     1081 tgccgtggca aacctgcgta cgattgaact ggcaggcagt caaaaccggc aagaccaaac
     1141 acgccagcaa cggcgcggag cggaaaatgc cgtctgaagc cctttcagac ggcatcgggg
     1201 cgggcagaat caaaaaagcc gcctccgctg gaatggcaat gcaactaaaa taatgtccgt
     1261 atttccatat gccgcccaca ccgtcagtcg gacgaaatgc cctttattca atgggatggg
     1321 tttccacaca aacggaaata tagtggatta aatttaatcc actatattat ccccgaggct
     1381 gccggcaggg aaacaaggcg tttgatgata aaaatgccgt ctgaaacagg gttcggatgg
     1441 catttttgat gttccggcgt aattttccgg cctaacggat tgccgtaccg gccctgccga
     1501 aatcgccgaa gttcatcaaa atgaacattg ccttgccgac aaccagcttg tcatccacaa
     1561 atccccagta gcgcgaatcg gcactgttgt cgcggttgtc gcccatagcg aaatagcgtc
     1621 cttcgggaac tttgcacacg aaaccgctgc cgtcgtcggc atattggcag tgttccaaac
     1681 cgctttgctc tatggaatat ccgttttcag acataatatc ggaggtatat ttgcccaata
     1741 cgggcaggga aacggcaggc tgtccttctt ttttcagaat attgaaggat ttgccgtcca
     1801 aaccgctgtg gaacatatcc gtattgtgga tttcggatgg gtcggtgtcg tcgggataac
     1861 ggtatgtgcc gtcaggaata tcggaagcag gttttccgtt taccgtcaaa actttattcc
     1921 gatattcgac cacatcgccc ggaatgccga caatacgctt gatgtaggtc atctccggtt
     1981 gcaaaggata attaaaaacg accacatcgc cccgttcgat tttgcctgta ggaataaata
     2041 tattgtttaa aacgggtacg cgcaggccgt aggaaaattt gccgaccaaa atgaaatcgc
     2101 ccttaatcag gcccgggcgc atcgagctgg acgggatttg gaacggttcg gcaataaacg
     2161 accggatgag gaacaatacc aaaacggtag ggaagaaact gccgaaataa tcgccgaagt
     2221 ggctgctttc cgagatttcg ggatgagtct tcaggcggta tttgtatacc ccccaagccg
     2281 taccgcacaa tacaacgaaa atcaggaaaa cggcggtaaa gctcataaac agggacaaag
     2341 cggcaaacac gccgaccgcc gtcaggatat aggcgtattc cagaccggaa ctccattcac
     2401 cgttttcctg ccgctttttg tcgcttttga aataaaggat gatgccggca agcagcgcgg
     2461 cagccgcgcc cgacattagc attgtgttca ttgttgttcc ttaatgctta aaaacccgcc
     2521 tgtccgtgca accgttttaa ggcggcaaat tgcaaaattt gtttgcgggc gtgtgcccct
     2581 gaaatcaggg cggtttgagg ggtgttcccg acgcgccgcc ctgtgtgcca gagttatttg
     2641 tcgctcacct gcaaaatcgc caagaacgcg ctttgcggaa tttccacatt gcccacttgt
     2701 ttcatacggc gtttacctgc cttttgtttt tcaagcagtt ttttcttacg cgtaatatcg
     2761 ccgccgtaac atttcgccaa aacgttttta cgcagggctt tgacgttttc gcgggcgata
     2821 atctggctgc cgatggcggc ttggacggcg atgtcgaaca tttggcgcgg aatcagctcg
     2881 cgcatttttg atgccagctc gcggcctcgg tgaaccgcgc tttgacggtg cacaatcagg
     2941 cttaatgcat cgactttttc gccgttgacc ataatatcca gcttaatcaa atcagacggt
     3001 tggaactctt tgaaatggta gtccaacgaa gcataaccgc gcgaagtgga tttgagtttg
     3061 tcgaagaagt ccatgacgac ttcgttcatg ggcaaatcgt aagtcagcat gacttggcgg
     3121 cccatgtact gcatattgac ctgaacgccg cgcttttggt tacacaaagt catgacgttg
     3181 ccgacgtatt cctgcggcac aaggatggtc gcggtaataa tcggctcgag tatggtttcg
     3241 atgctgccga tgtcgggcag tttggacggg ttttcaactt cgattttttc gccgcttttc
     3301 aacacgactt cgtaaaccac cgtcggcgcg gtggtaatca aatccatatc gaactcgcgc
     3361 tccaagcgtt cctgcacgat ttccaagtgc aacagaccca agaagccgca acggaagccg
     3421 aagcccaatg cctgggaaac ttcaggctcg aatttcaacg aagcgtcgtt aagctgcaat
     3481 ttttccaaag cgtcgcgcaa ggcttcgtag tcgtggcttt ccacgggata aagtccggcg
     3541 aatacttggc tttgtacttc ttggaagccg ggcagcggct cagtggcagg gttggcaacc
     3601 agtgtaaccg tatcgccgac tttcgcctga cccaattctt ttacgccggt aatcaaaaag
     3661 cccacttcgc cggctttgag ttcttgtttt tgaaccgatt tcggtgtgaa tacgcccaac
     3721 tgctcaacct gcgtttccgc cttggtgctc ataaagcgca ctttgtcttt cagtttgatg
     3781 gtgccgtttt tcactcgaat cagcatgacc acgccgacgt agttgtcaaa ccacgaatcg
     3841 acaatcacgg cttgcagcgg cgcgttttca tcgccggtcg gcgcaggaat tttggcaacg
     3901 atttcttcca aaacgtcttc cacgccgatg ccgcttttgg cggaacactg caccgcgccg
     3961 accgcatcga tgccgatgat gtcttcaatt tcctgctcca cgcgttcggg gtcggcggct
     4021 ggcaggtcga ttttgttcaa aacaggcaca acctccacgc ccaaatcaat cgcggtgtaa
     4081 cagttcgcta cggtttgcgc ttccacgccc tgcgacgcgt caacgaccaa aagcgcgcct
     4141 tcgcaagccg acagcgaacg ggaaacttcg taagagaagt cgacgtgtcc cggcgtgtca
     4201 atcaaattaa gctgatacac ctgcccgtcg cgcgctttat agttgagcgc ggcggtttgc
     4261 gctttgatgg taatgccgcg ctctttttcg atgtccatgg aatcgagtac ctgcgtactc
     4321 atttcgcgca aatccaaacc gccgcaatat tggatgaagc ggtcggcaag cgtcgatttg
     4381 ccgtggtcga tgtgggcaat gatggagaaa tttcggatat ttttcattag agttgttttg
     4441 aatgtcggac agtgggtttg ggaaatgccg tctgaacaaa cggcgttgcg tccgaatatc
     4501 gggcgcaacg tggaaatagc ccgatattct aacggaaaac cgctgttttg gcatgatttg
     4561 ataaaggttt tataaagatt tgacgatttc tgccaccatt tttgcagaac ttgccgccgc
     4621 cgttttcaaa aattcgtcaa agctgatgtc tgctttttca tctgccgaat cggaaaccgc
     4681 gcggatgatg acgaaaggcg tttccaactg atgacaggtt tgggcgattg ccgccgcttc
     4741 catttctacc gccttaactt cggggaagtg cttgcggatt tccgccacgc cttcgctgct
     4801 gtggacgaag cggtcgccgc tgacaatcag accttgttct accgccgcgc cttcaaacgt
     4861 ccgcgccgcc cgttttgcct tgccgaccaa gaggtcgtct gaaacgaata cggcgggcag
     4921 ttgcggcact tgtccccaaa catagccgaa tgcggttaca tcgacatcgt ggtgtgcggt
     4981 ttccgtgcca atcaccacgt cgccgacttt caaacccttg cccaaaccgc ccgcgctgcc
     5041 ggtgttgatg acgcagtccg ctgcgaattc acggataatc caagccgttg caaccgccgc
     5101 gttgaccttg ccgatgccgc tcaatgcaag caccatgcgt tttcccgcta attcgccttc
     5161 ataggcggta aacttgccga aagagacggc tttgacattt tccatcatct cgcgcaaaag
     5221 ctcgatttct tgttccattg cgccgataac ggctactgtt ttcaaagaca tattgctgac
     5281 ctgttgtgaa tttcggatag aatgcctgat tatacacgct aacacggcag gattgagtgg
     5341 gggcggtttg tccgtgccgt ctgaaacggt ttcagacggc acggcgggtt tttggtagaa
     5401 tgggaaggta cagattgttt gaagattagg ggacgaggat gtttaccgat gaaaatatga
     5461 ccgcaaagga agaactgttc gcatggctgc gccatatgaa ccaaaacaaa ggttccgacc
     5521 tgttcgtgac gactcatttc ccgcccgcaa tgaagctgga cggcaaaatc acccgcatca
     5581 cggacgaacc gctgacggcg gaaaaatgta tggaaatcgc cttttcgatt atgagtgcga
     5641 agcaggcgga agaattttca tcgaccaacg agtgcaactt cgccatcagt ctgccggaca
     5701 ccagccgctt ccgcgtcaat gcgatgatac agcgcggcgc gacagcgttg gtattccgtg
     5761 cgattaccag caagattccc aagtttgaaa gcctgaacct gccgccggtc ttgaaggatg
     5821 tcgcgctgaa aaaacgcggg ctggttattt ttgtcggcgg caccggctcg ggcaaatcga
     5881 cttcgcttgc ctcgcttatc gactaccgca atgaaaattc gttcggacac atcatcacca
     5941 tcgaagaccc gatcgagttt gtccacgaac acaaaaactg catcatcacc cagcgcgagg
     6001 tcggcgtgga tacggaaaac tggatggcgg cgttgaaaaa cacgctgcgt caggcgccgg
     6061 atgtgattct gatcggcgaa atccgcgacc gcgaaacgat ggactacgcc attgcctttg
     6121 ccgaaacggg gcatttgtgt atggcgacgc tgcacgccaa cagcaccaat caggcactcg
     6181 accgcatcat caactttttc cccgaggagc ggcgcgaaca attgctgacg gatttgtcgc
     6241 tcaaccttca ggcgtttatt tcgcaacgcc tcgttccgcg agacggcggc aagggcaggg
     6301 tggcggcagt cgaggtgctg ctcaattcgc ccctgatttc ggagttgatt cacaacggca
     6361 acatccatga aatcaaagaa gtgatgaaaa aatccactac cctgggtatg cagaccttcg
     6421 accaacacct ttaccaattg tatgaaaaag gcgatatttc cttgcaggat gccttgaaaa
     6481 atgccgattc ggcgcatgat ttgcgtttgg ctgttcagtt gagaagccgc cgcgcgcaaa
     6541 gttccggacc ggatttggaa ttgctctgat gaagggtatg gatttccgga cggatggttt
     6601 gaaatgattt atccgtggca taatgagcaa tggcggcaga ttgcggaaca ttgggagcgc
     6661 cgtcccaatg cttggctgtt tgccggcaaa aaaggcatag ggaaaaccga gtttgcccgc
     6721 tttgcggcgc aagcattatt gtgtgaaaac ccaagtccgg atcaccgggc ttgcggggct
     6781 tgtgcttctt gtcatttttt tgaacaaggc agtcatccgg atttttacga aatcactccc
     6841 ttgtcggacg aatccgaaaa cgggcgcaaa ctgttgcaga tcaaaatcga tgccgtcagg
     6901 gaaatcatcg ataatgtgta cctgacttcg gtacggggcg gtttgcgcgt ggttctgatt
     6961 catcctgcgg aaagtatgaa tatccaggcc gccaacagtt tgttgaaagt gttggaagag
     7021 cctccgccac aagtggtctt tttgctggtc agccacgcgg cggacaaggt tttaccgacc
     7081 attaaaagcc gctgccggaa aatggttttg cccgcgcctt cccatgaaga ggcattggca
     7141 tatctgcgtg aaaggggtgt ggcggaacct gaggaacgtc tggctttcca ttccggagcg
     7201 ccgctgtttg atgaggcgga cggtgtccgt gcgttgcgga ttaaactgtt ggatattttg
     7261 gcagaaccga ggttgttgaa gattttggat tacgccgcgc ttttcgataa ggaaaaactt
     7321 ccgctcgccg tatttgtcgg gtggatgcag aaatggctgg tcgatttggg attgtgcctg
     7381 caacacatga aacccgtcta ttatcccgct tatgaagaca ggctgcttca gacggcatcc
     7441 ggtttccgcc cgcgcaatgt atttgcggcg gaggatatgc tcaaacagct tgccccctac
     7501 gggtttcata ctttaaatgt caaaatgcag atcgagcatc tgctcatcaa ttatttggaa
     7561 ttgaagaaag agaacgggtg aattatgtca gacggacaaa atattccggc aaaaatgatg
     7621 tcgttgcagc tgaaagacat gaatctgctg tacagctcct atatgccgtt tttggaacat
     7681 ggcggcctgt ttgtgcagac cgacgacgta ttttccatcg gggacgatat tctgcttgcc
     7741 gtagaaatcc tcaacttccc caaactgttc ctgccaacca aggtcgcttg gattaatcct
     7801 gcgcgtactt cctccaaacc caaaggggtt gggctggcat tcacaaaaca cgaaaactgc
     7861 ctgaaagtca aagaccagat cgaagtcgaa ctgggcagca caatcggcgg cagcagacct
     7921 acgtttacca tgtaacgcca tgcatatcat cgattcgcac tgccacctca attttgaagg
     7981 tttgaaagaa cgcctgcccg aagttttgtc caacatggaa gcaaacggcg tggggcaggc
     8041 gctcgccatc agcgtcagta gggaaagctt ctccgaagtc tttgccatcg ccgaagcgca
     8101 cgaacacatc tattgcacca taggcgtaca tcccgacagt aaggaagccg aagaattttc
     8161 cgtcgcggaa atggtcgaag ccgccgccca tccgaaagtg gtcggcattg gcgagacggg
     8221 tttggattat tactggtgca aaggcgattt gtcctggcag cacaaacgct ttgcagacca
     8281 catcgaagca gccaatcaaa ccggactgcc cgttatcgtc catacgcgtg atgcggcggc
     8341 ggataccttg tctatcctga aagaatgccg ggttaattcg ggcgttatcc actgtttttc
     8401 cgaagacatc ggttttgccc gtgcagcaat ggattttggg ctttatattt ctttctcggg
     8461 aatcgttacc tttaaaaacg cacccttggt tcaggaggcg gcaaaatacg ttccggacga
     8521 ccgcattttg gtggaaaccg atgcgccgtt cctcgccccc gttcccaaac gcggcaggca
     8581 gaacgaaccg gcttttgtgc gccataccgc cgaacatatc gccaaattgc gggaccaaac
     8641 attggaacag gttgcggcat atacgacgga aaacttttac cggctgtttc aaaaagtacc
     8701 cgatatgcgg gccgtctgac cctgtgccga cgataaggaa aaccatgaag gcaattcatc
     8761 cgtatgcatg tccgcgctgc tgccggctgc ctgccaacac gtttcggaca ggcatggcaa
     8821 attccgcttc caaattctgc attgccaaag gcggcagacg ggaagtaaaa aaagacgaaa
     8881 gcggcggcgg atatgccctg tgccatttgc cggacagtag gattgtcgag gagtgggaat
     8941 atttccgttc acaacattga tactgcgcga tatacggcaa atattgtggg aagtttccgc
     9001 ttttgcgtat aatgcgccct acctgacaaa ttttgtcaac tttatcaaaa ggaataagcg
     9061 atggcttcca tccacgacca aattaaagaa gtagtaacga cacaccgcgt cgtattgttt
     9121 atgaaaggta cgaagcagtt tccgcaatgc ggtttctctt cccgcgccgt gcaaatcctg
     9181 aacgcggcgg gctgcaccga ttacgttacc gtcaacgtat tggaaaatcc cgaagtacgc
     9241 caaggcatta aggaatacag cgactggccg accatccccc aactttatgt gaacggcgag
     9301 tttgtcggcg gttcggacat cctgatggaa atgtatgagg caggcgagct gcaagagctg
     9361 ctgaaagcct gatggattcg gcaatgccgt ctgaacgtgt ttcagacggc attttctttt
     9421 ccggcaaatc aaaaaaaagt ataatggcgc gtctcaaaat cacactggaa caccgcgatg
     9481 aacgttaatg ttatcaacca tccgctcgtc cgccacaaat taaccctgat gagggaggcg
     9541 gattgcagca cctacaaatt ccggacgctt gccatcgagc tggcgcgcct gatggcatac
     9601 gaggcaagcc gtgattttga aatcgaaaaa taccttatcg acggatggtg cggtcagatt
     9661 gaaggcgatc gcatcaaggg caaaacattg accgtcgttc ccatcctgcg tgcaggtttg
     9721 ggtatgcttg acggcgtact cgacctgatt ccgactgcca aaatcagcgt agtcggactg
     9781 cagcgcgacg aggaaacgct gaaacccgtt tcctacttcg agaaattcgt ggacagcatg
     9841 gacgaacgtc ctgccctgat tatcgacccg atgctggcga cgggaggttc gatggttgcc
     9901 accatcgacc ttttgaaagc caagggctgc aaaaacatca aggcactggt gctggttgcc
     9961 gcgcccgagg gtgtgaaggc ggtcaacgac gcgcatcccg acgttacgat ttacaccgcc
    10021 gcgctcgaca gccacttgaa cgagaacggc tacatcatcc ccggcttggg cgatgcgggc
    10081 gacaagattt tcggcacgcg ctaactgact gattttcgga gttgatatga attttcaaga
    10141 ctatctcgcc acatttcctt caatcgacca tctgggcggt ttggacgttc aggatgccga
    10201 cggcaaaacg gttcaccaca ttcccgccgt tcagggtaag ctcggttcgc tcaagctgta
    10261 caatgctttg gcagaacgtt ttgacggaaa attggataaa gaagcggcag aacagggttt
    10321 gatatggttt gccgaacacg ttgccgacgc gcgcgcccat cccggcaagc atcccaatat
    10381 cgacctgctt gaaaaagttg tgcaaagcgg cgaaaccttg ctgctcaagc cgcttgccgc
    10441 gcaataattt tcgaccatgc cgtctgaaat ccgtttcaga cggcatttta tcggaaagaa
    10501 gaccgtaaaa cgggcatttt cttttctatt tcaggatacg ggcaatgatg tttcaacaca
    10561 caggacgata c
//
LOCUS       DAXHKG010000064        10564 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.064, whole genome shotgun sequence.
ACCESSION   DAXHKG010000064 DAXHKG010000000
VERSION     DAXHKG010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10564
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.064"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..192
                     /locus_tag="ACFMWP_001247"
     CDS             <1..192
                     /locus_tag="ACFMWP_001247"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891848.1"
                     /translation="VDVFGNHGLGGLLEEGAHEKSPKCLSRNLGDFEEFCKGLYLYCL
                     RLAALSLFKFNSLYLPVRL"
     gene            241..423
                     /locus_tag="ACFMWP_001248"
     CDS             241..423
                     /locus_tag="ACFMWP_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891849.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(485..1486)
                     /locus_tag="ACFMWP_001249"
     CDS             complement(485..1486)
                     /locus_tag="ACFMWP_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HFC5891850.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1563..5396)
                     /locus_tag="ACFMWP_001250"
     CDS             complement(1563..5396)
                     /locus_tag="ACFMWP_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HFC5891851.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEYVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKERWDWLLANLDTPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5657..5753
                     /gene="ffs"
                     /locus_tag="ACFMWP_001251"
     ncRNA           5657..5753
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACFMWP_001251"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5921..7612
                     /gene="dld"
                     /locus_tag="ACFMWP_001252"
     CDS             5921..7612
                     /gene="dld"
                     /locus_tag="ACFMWP_001252"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HFC5891852.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPSEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            7744..7851
                     /locus_tag="ACFMWP_001253"
                     /pseudo
     CDS             7744..7851
                     /locus_tag="ACFMWP_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7907..8278
                     /locus_tag="ACFMWP_001254"
     CDS             7907..8278
                     /locus_tag="ACFMWP_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HFC5891853.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8433..8981
                     /locus_tag="ACFMWP_001255"
     CDS             8433..8981
                     /locus_tag="ACFMWP_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC5891854.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            9116..10207
                     /locus_tag="ACFMWP_001256"
     CDS             9116..10207
                     /locus_tag="ACFMWP_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC5891855.1"
                     /translation="MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDK
                     YLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNRYLDDGYDSLKTRLD
                     GAWAETERLAGLAWSGTPDNLTTLKLREAAAVLTLAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
BASE COUNT         2447 a         2892 c         2863 g         2362 t
ORIGIN      
        1 gttgatgtgt ttggcaatca tggcttgggc ggtttgctgg aagaaggtgc tcatgagaaa
       61 tcccctaaat gtcttagtag gaatttaggg gattttgagg aattttgcaa aggtctctat
      121 ttgtactgtc ttcggctcgc cgccttgtcc ttatttaaat ttaattcact atatttgccc
      181 gtgcgtttgt gataaattcg gcactgtatt tgatatgatt ttaacaaatc gggaggggca
      241 atgttttggt atgtaatcgg cttttgctcc tttgtcgtcg cgctgctgtc gctgtgggtc
      301 aatgtcggcg cattcggtat gcaggaagac gataccccgc aatcggatta tgaaaaacgt
      361 ttgggcttgg gtgcgaagct gaaaaacaaa aatacgccgg atacggaaga aaagcagcaa
      421 taaagatatg aaatgccgtc tgaaagattt tcagacggca tttgctttga agcatgggag
      481 acagtcaaac atttatctca tgctcaaatg cgttcaggat tcggcggact tcatccgcat
      541 ccttaaccgt tcggacgcgg tcaaacagcg tttgcgccgg gtcgaacgtt tttttcatca
      601 tgcccaacca ttgcttaaga cgggcgatcg ggtatttatt gtttgcctct tttgtcaggc
      661 acagctcgaa aaactgccgt atccatttag aaacttcggc aaaatccgtg tctttgaccg
      721 gcccgccgtt ctcgtattgc ttgatttgcc gcgccaaatc ggggcggatg accgcgccgc
      781 gaccgagcat cacgctgttg cagccgctga ttgttttgat gccgatatag tcttgcaggc
      841 tgaaaacgtc gccgttggcg gtaacgggaa tattgacgct gtctcggatt ttccttatcc
      901 attcccaatg cgccggcggt tcgtaaccct cggctttggt acgcgcgtgt acggtcagtc
      961 cgcatgcgcc cccttcggca atcgcacagg cgcattccaa agcccggctt ttgtcttcgt
     1021 aaccgagccg catttttgcg gtgagcggaa tatgtgcggg caaacgtccg cgcagcgttt
     1081 tgacgatgtg gaatatcagt tccggctctt ttaaaaggat tgcgccgcct ttgtgtttgt
     1141 tgacggtggg cgcggggcag ccgaagttca aatcgatttt gttcgcaccg aagcggacgg
     1201 cttccagcgc attcgccgcc atattgtccg catcgctgcc caaaagttgg acggtgcagg
     1261 gcgtgccgga aaacgttttg tttccgttgg cgatttcggg gacatatttt aaccatatgg
     1321 atcgggaatg cacggtatgg gtaatgcgta caaattcgct gacgcattcg tcgtagccgc
     1381 caatacgcgt cagcaggtcg cgcatcacgt catcgaccag accctgcata ggggcaagga
     1441 tgattcgggt tttttgtttg ggttcggttg tttgtccgtc aatcatgatt cgggtaggta
     1501 tttgattcaa acaatgccgt ctgaaggctt tcggcgttca gacggcattt ccgtgtccgt
     1561 tgttacagca atactttttc cacgccgccg ttgttggctt ttttcacaaa ctcgtctagc
     1621 cagttttcgc cgaggatgtg tttcgccatt tcgatgacga tgtagtcggc aggcatattg
     1681 ttgtcgtcgg tgtagcggct caagccttgc aggcaggctg ggcaggaagt aagcattttg
     1741 acgggttcac cctgcggcag ctctttgagg tttttctcga tttcctcttg tttgcggaat
     1801 ttgacttggg tggcgatatc gggtcgtttg acggcgaaca taccggactc gccgcagcag
     1861 cggtcgctta agacgacttt ctgccccatc aggctgctgg ccatttgggt ggcgttcatg
     1921 gttttgatgg gggtgtggca ggggtcgtgg tagaggtatt gctgaccttg cacgccgtcg
     1981 agtttcacgc ctttttcgag caggtattcg tggatgtcga tgatgcggca gccggggaag
     2041 atttcttcaa agcggtattt ttcgagctgg tcgtaacaag tgccgcaact gacaacgacg
     2101 gtcttaatgt cgaggtagtt gagggtgttt gccatacggt ggaaagccac gcggttgttg
     2161 gtgctcattt cttcggcttt agccttgttg ccgcccgcgt cttgcggata gccgcaacac
     2221 atatagccgg gcggcaggac ggtttgtacg ccgacgtgcc agagcatggc ttgaacggca
     2281 agtccgattt ggctgaacag gcgttccgaa ccgcaacccg ggaagtagaa cacggcttcg
     2341 gcatcttcgg gcgcggcggg gttgcggatg atggggatgc ttttgccgtc ttcgatgccc
     2401 aataaggagc gcggtgtttt ggcgggtacg cttttcggca aaggacggtt gatgaaatgg
     2461 ataacctgtt ctttaattgg ggctttgccg acggttgcct tgggttcggc tttttgcttt
     2521 ttcgtgccga tcggaagaag cttgccgatt ttgtaggcaa agttttgcgc tgggaagccg
     2581 gtctgtatca tggcggcgcg aagggctttg atggttttcg ggccggtggc gttcaaaaac
     2641 gccataccca tagctgcggc aggcgcaaat cgtttgtggc cggaatcggc aaggtagttg
     2701 cggacggcta cggttacgtc gccgaagtcg atgttgacgg ggcagggttt gacgcagcgg
     2761 tggcacacgg tgcagtggtc gccgatgtcc atgagttctt caaagtgttt gacggaaacg
     2821 ccgcggcggg tttgttcttc gtataagaag gcttcggtca gcaagcccac gccgaggatt
     2881 ttgttgcgcg gactgtacag caggttggca cgcggaacgt gagtagagca gacgggtttg
     2941 catttgccgc agcgcaggca gtctttgacg gaatcggcaa tcgtgccgag gtctgatttt
     3001 tccataatca gcgattccgc gcccaaaagc tcgaaagacg gcgtgtaggc gttgcgtaag
     3061 tccgagcctt tcatcagttt gtggcggttg aaggtgtgtt tgggatcgac ttggtttttg
     3121 tagtcccaaa acggctgcat ttcttcatcg cttaaaaatt cgagcttggt gatgccgatg
     3181 ccgtgttcgc cggaaattac gccgccgagc gaacgggcga ttttcataat gcgttcgacc
     3241 gaacggtagg ctgtctgaag catttcggca tcgtctgagt tgaccggaat attggtgtgg
     3301 acattgccgt cgccggcgtg catatgcagg gcgacaaaga ctctgccgcg tacggttttg
     3361 gcgtggattt tgcccaagcc ttggataatc ttggtatcgg ttttgccgct gaagatttcg
     3421 gcgagtggtt tcattacgtc tgctttgaca gacacgcgca ggcggaaatc gcggaatgcg
     3481 gtaaagcagc tttcattgtc tttggcttcg ggcgcggcgt ggacggctgc accgtagcgg
     3541 gctttgtagt cggcaagcgg cgtgtccaaa ttggcgagca accagtccca acgttctttg
     3601 acggcggcaa cgtgggccaa ggcgtgtttg ccgcgttcgc ccaaaagttc ggcggtcggc
     3661 aggtcagtgc ccattttgtc gatggggagt ttgcccgaaa gatattgctc caaggcggca
     3721 cagagtttga gcttgttttg gatggaaagc tcaatgttga tgcgttcgat gccgtccgaa
     3781 tactcgccga gcctttcgag cgggatgacc acgtcttcgt taattttaaa ggcgttggtg
     3841 tgcttggcga tggcggcggt gcggctgcgg tcgagccaaa aggttttgcg cgcttcggga
     3901 gacacggcga taaagccttc gccatcgcgg gcgcgggcaa gttcgcaaat gtgttcggcg
     3961 gctgcctcta cggcggcttc gtcgtcggaa accacgtccg ccagcaagac cattttcggc
     4021 cgtcccttgc ccgccgcttt ggttgcgtag ccgacggcgc ggacgtaacg ccagtccaaa
     4081 tgttccaaac ctgccagccg aacgctgtcg tgggcgagca ggaaatcgcg gatttcgacg
     4141 atagaaggcg tagcggtggc gaccgtgccg aaaaactcca tacacacagt gcgcgtgtat
     4201 ttcggcattt tgtgcaacac gaaagcaacg ccggtgatga tgccgtccgt gccttctttc
     4261 tgtacgccgg gcaggccgct caagaatttg tcggtaacgt ctttgcccaa accgactttg
     4321 cgaaatttgt ggccgggaat ttccaaacgt tcggttttaa cgatattgag gccgtctgaa
     4381 tccagcgtat gtacgtcaaa cacggcggtt tcttcatcgt ggattttgcc gaaattgtgg
     4441 cgcacgcgct cgatacgcag ccattcgcct tgagggttga ccatctgcca gtaggcgagg
     4501 ttgtccaacg ccgtccccca caacacggct tttttgccgc ccgcgttcat cgccacattg
     4561 ccgcccacgc aggacgcatc ggcagaagtc ggatcgacgg cgaacaccaa acctgcctga
     4621 tgcgcggttt cttccacccg ccgcgtaacc acgcccgcgc cgcaccggat aatcggatgc
     4681 ttgccgtcca atcctgccag ctcaacgtat tccacgccgc gatgcttgtc gagcttttcg
     4741 gtattgatga ccgcgctcat tgcgtccaaa ggaatcgcgc ctccggtata acccgtgccg
     4801 ccgccgcgcg ggataataac caagtccaat tcgattaaag cgcgcaccaa aggcgcgact
     4861 tccgcctccg tgtcgggatt gacgacgaca aacggatact ccacgcgcca gtcggttgca
     4921 tcggtaacgt gcgttacccg cgccagcccg tcgaacataa tattgtgcgg cttggtgatt
     4981 ttgctcaaac gctccaaaat ctgccgccgt ttttggctgg tttcatcaaa actgctatca
     5041 aaacgctcga ctgctttttc tgctgcggca accaacacat ccacttgccg attatcgtcg
     5101 cggcgtttgc ggatttcatt taagcggtgg cgcatttcac gtaccagcgc ggcgcggcgt
     5161 tttgggtgct ccagcaagtc atcgaccaga tacggattgc gcacgaccac ccaaatatcg
     5221 cccaacactt caaacagcat ccgcgccgaa cgcccggttt tgcgctgtcc gcgcaagtct
     5281 tgcaggattt gccacgcctc atcgcccagt aggcggatga cgatttcgcg gtcggtgtag
     5341 gaagtatagt tgtagggaat ttcccgaata cgctgagggg cggtagtcgt ggtcatggtg
     5401 tgtccgtgtt tggcagtttt tatttgaatg ccgtctgaaa attcggtttc aggcgggttt
     5461 gaaaaggcga taatgtagtt caatttttga tatttttcaa tgccgaaaca ggaaataccc
     5521 ttatagaaac aaaataacgc tttgagaaat tgttgacaat attatcaaat ataaatttta
     5581 ggtggtgttt ccggcgtatg accgtatcaa aacggttgag tttttcagaa aacccgttat
     5641 aatgccgttt ctctgaggcg ggtctccccg catggcaaat cggaacaccg ggtcaggggc
     5701 ggaagccagc agcccactcc gatgcgccag tgccgggggt ttggcccgcc gccctatttg
     5761 aaacgccgga gctttgatgt tccggcgttc ccgtatcgca ccgttgccgt ctgaaagccg
     5821 ttcagacggc attttcttta ctttgccata acgtataact acaatgtgaa aacaattcca
     5881 atgtgcatat gcacctgccg acaattttaa ggaaactgcc atgagcgcat cacaattact
     5941 gtcaagactg acccaaaccg taggcgaaaa atacatcatc accgaccccg cgaaaaccga
     6001 acaataccgc caaggctacc gcttcggcga gggtaaggcg ttggcggtgg ttcgccccgg
     6061 aagcattctg gaaatgtgga aaattctgca ggcgtgcgtc gaagcagacg tgattgtgat
     6121 tacgcaggcg gcgaataccg gactgaccgg cggttcgacc cccgacggca acgattacga
     6181 ccgcgacatc gtgattgtga acaccatgcg gatgaacatc atccaaacca tcaacaacaa
     6241 cgaacaagtc gtctgtctgc ccggttcgac cctgaaccag cttgaattgc tgctgaaacc
     6301 tttggggcgc gaaccgcatt cggtcatcgg ctcatcctgt atcggcgcgt ccgtcttggg
     6361 cggcgtgtgc aacaactccg gcggcgcgtt ggtacagcgc ggcccggcct acaccgaaat
     6421 ggcgttgttc gcccaaatca acgaagaagg caggttggaa ctggtcaacc acttgggcat
     6481 agacttgggc gacacgcccg aagaaatcct gaccaacctg caaggtcatc attatcaaaa
     6541 caaagacatc aaacaagacg cgggcaaagg acacgaccac gcctattgcg aacacgtccg
     6601 ccaagtggac gaaccgaccg ccgcgcgttt caatgccgac cccgcccgcc attacgaagc
     6661 ctcgggctgc gcgggcaaac tgatggtttt tgccgtccgt ttggacacct tcccgcaaga
     6721 aaaacaaacc gccgtgttct acatcggcac gaacgacatc aacgagctga ccgacatccg
     6781 ccgcgccgcc ttgggcgaat ttgaaagcct gcctgtttcc ggcgaataca tccaccgcca
     6841 cgctttcgat attgccgacg tgtacggcaa agacacgttt tacgtcatca aaaaattcgg
     6901 tacgcaccaa ctgccgaaat tatttgactt gaaggcgcgc gtggacaggt tcggcaaaaa
     6961 agccagcttc ctgcccaaac atttttccga caaggccatg cagttcgtca gcaaatacct
     7021 gcccgaccac ctgcccaaat ccatgcgcga ttaccgcgac aaatacgaac accacctgat
     7081 tctgaaaatg ggcgggaaag gcgtggatga ggcgcgcgcg ttcttaaaag aatattttgc
     7141 acaccacagc ggcgcgtttt tcgagtgcaa cgccgaagaa acccaagccg cgatgctgca
     7201 ccgtttcgcc gtcgcctccg ccgccatccg ctaccgcgcc gtgcatgatg acgaagtgga
     7261 agacttggtc gcgctcgaca tcgccctgcg ccgcgacgat cgcgactggt ttgaaaaact
     7321 gccgtcggaa atcgacaata aaatcatcca taaactctac tatggacatt tcatgtgcca
     7381 cgttttccat caggattaca tcatcaaaaa aggcaacgac tgcatggcgt tggaacacga
     7441 aatgctgcat cttttagacc aacgcggcgc gcaatatccc gccgaacaca acgtcggtca
     7501 tttgtatgaa gccaaacccg cgctcaaaca gttttaccgc aaacttgacc cgaccaacag
     7561 cttcaacccg ggcgtaggca aaaccagcaa aaagaaaaac tgggcggaat aagcgcgtcc
     7621 gctttgaagg caggcaatgc cgtctgaagg caaaacgccg ttcagacggc attgtcgggt
     7681 ttgaagttcc ccatcgggta atcgctttca agccgtatgc cggcacaggc gcgcgcgcct
     7741 cccaaatata gtggattaaa tttaaatcag gacaaggcaa cgaagccgca gacagtacag
     7801 atagtacggc aaggcgaggt aacgccgtac tggtttaaat ttaatccact ataaagtctg
     7861 atcctacctt cccaaagggc agggtttcaa ccgaaaagga aacacgatga aaccatacaa
     7921 aatctacacc catcccgccc tgccgcccca agccgtcaaa caaggctggt cgtggccggg
     7981 ccttttgttc ggcacgctgt gggcgtgttt caaaagaatg tggggtttgg ggctggggct
     8041 gacgggcgcg atattcgtgc tggcggtgtt tgcccaactg gtttacggcg acacgcccgc
     8101 cacagactcg gcgtttaacg tattgggctt ggcggtttcc gtctggttcg gcgcaaaggg
     8161 caacagcctt tatgcacgcc accttttatc gcgcggctat accgaattgc ccgaaacggt
     8221 tgaggcagcc aatccccaag ccgcattggc gcaatatttc gggcgcgggg gccgataagc
     8281 gcgttttctt ttccatcatg ccgtctgaaa aatgttcaga cggcatttct tataaccttt
     8341 tgtttgcagc acataaccaa tcagtctttc ctattccgtt ccgaaatgca taccatgcgc
     8401 ccgtacccaa tatttgcgaa caaggaaaga aaatggcacg tttaaccgta cacaccctcg
     8461 aaaccgcccc cgaagccgcc aaagcgcgcg tcgaggcggt acttcaaaac aacggcttta
     8521 tccccaacct tatcggcgta ttatcaaacg cccccgaagc cttggcgttt taccaagaag
     8581 tcggcaagct caacgccgcc aacagcctga ccgctggcga agtcgaagtc atccagatca
     8641 tcgccgcccg taccaaccaa tgcggttttt gcgtggcagg gcacaccaaa ctcgcaaccc
     8701 tgaaaaaact cctgtccgaa caatccgtca aagccgcgcg cgctttggca gcaggcgaat
     8761 ttgacgatgc caaactcggc gcgctcgccg ccttcaccca agccgtaatg gcgaaaaaag
     8821 gcgcggtatc cgatgacgaa ctcaaagcat ttttcgacgc gggctacaac cagcagcagg
     8881 cagttgaagt cgtgatgggc gtagccttgg caactttgtg caactacgtc aacaacctcg
     8941 gacaaaccga aatcaacccc gaattgcagg cttacgcctg atacggcaaa ccgcccgaat
     9001 atcgggcggt ttttcaaaaa caccccctca aacaaaaaca agccgcctaa gcggcaggga
     9061 agcagccgcg catcaggcgc gcccccgatt tccccgcaaa ccttaaggaa caaagatgaa
     9121 cgcccaaacc ctgattgcca acgttgccga attcgtcaaa accaagctca aacccatagt
     9181 ggacgacatc gaccgcaaag gatactaccc cgaagcattt atgcgcgaac tcggcgcaat
     9241 cggtggattc ggcgcagtcg gtacagaagc cgaaggcggc aacggcttgg gtttggcaac
     9301 gcaaatcgcc gtattgcgcg aaatcggcaa agaatgcggc gcaacctctt tcagtgcgtg
     9361 gtgtcaggcg gcttgcgcgt ggtatctgca ccaaacgccc aaccgggccg tcaaagacaa
     9421 ataccttgcc gacatcctgc aaggcaaagt attggcgggt acgggcatgt ccaataccgt
     9481 caaacacctt gccgacatcg aaaaacacaa cctccaagcc gagcgcgtgg agggcggcta
     9541 cacagtcaac ggcgcgctgc cgtgggtgtc caacatcggc gaagaccaca tttgggcgaa
     9601 taccgcccaa atcggcggcg gctacgtcat gttcatcaca ggcggacaat gggaaggcgt
     9661 aagcctgcaa aactgccccg aattttgcgc cctcgaaggc acgcgcacct tcagcctgaa
     9721 cttcaaagac gtatttatcc ccgacgaaga catcatcgcc gcgcccgaac agtttgccga
     9781 ctacatccaa agcatcaaag caggctttat cctcctgcaa atcggcatcg gcgcgggcgt
     9841 gatagacggc agcctcggca tcatccgcct cgccaacgtc gtcaacgccg aagtcaaccg
     9901 ctatctcgac gacggctacg acagcctcaa aacaaggctg gacggcgcgt gggcagaaac
     9961 cgaacggctc gccggattgg cttggagcgg cacgcccgac aaccttacca ccctcaagct
    10021 gcgcgaagcc gccgccgtac tgacacttgc cgccgcccaa tccgccgccc tgcattccgg
    10081 cgcaaaaggc tacctgatgc ggagtcccgc ccaaaggcgc gtccgcgaag caatgtttgt
    10141 cgccatcgta actcccgcga tcaaacacct ccgcaaagaa atagcggcaa tcgaagccgc
    10201 aaaataaaca ggcggaaaaa accgaaaccc ccatcgcgtc attcccgcga aagcgggaat
    10261 ccagccccca acgcaacagg aatccatcgg aaaaaacaga aacccccaaa ccgtcattcc
    10321 cgcaaaagcg ggaatccagc cccctaacgc aacaggaatc catcgaaaaa accgaaacct
    10381 ccaaaccgtc attcccacgg aagtgggaat ccagtaaccg aaaaaccaca ggaatctatc
    10441 gaaaaaaaac ccaaccccca aaaaaaccgg gcggatacct caccatcctc ccaaaccctg
    10501 atttatagcg gatgaacaaa aatcagggca agacggcgaa accgcagaca gtacaaatag
    10561 tacg
//
LOCUS       DAXHKG010000065        10261 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.065, whole genome shotgun sequence.
ACCESSION   DAXHKG010000065 DAXHKG010000000
VERSION     DAXHKG010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10261
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.065"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(257..1474)
                     /locus_tag="ACFMWP_001257"
     CDS             complement(257..1474)
                     /locus_tag="ACFMWP_001257"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HFC5891856.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVEAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1676..2404)
                     /gene="rph"
                     /locus_tag="ACFMWP_001258"
     CDS             complement(1676..2404)
                     /gene="rph"
                     /locus_tag="ACFMWP_001258"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HFC5891857.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2486..2950)
                     /locus_tag="ACFMWP_001259"
     CDS             complement(2486..2950)
                     /locus_tag="ACFMWP_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HFC5891858.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3167..3943
                     /locus_tag="ACFMWP_001260"
     CDS             3167..3943
                     /locus_tag="ACFMWP_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC5891859.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPGCQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4188..5042
                     /locus_tag="ACFMWP_001261"
     CDS             4188..5042
                     /locus_tag="ACFMWP_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HFC5891860.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5083..6291
                     /gene="pncB"
                     /locus_tag="ACFMWP_001262"
     CDS             5083..6291
                     /gene="pncB"
                     /locus_tag="ACFMWP_001262"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HFC5891861.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     AEGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AATQNPDDPPFLISDFGTRRRYNLPWQEHVIRTLLEAAPGIVRGTSNVYLAKKLGITP
                     IGTMAHEFLQAFQALDVQLRNFQKAALESWVHEYRGDLGIALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYEWGDKAYTHYKKLKIDSRTKMLTFSDGLDIDRSWALHQYFKD
                     RFKTSFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNNTFLAYLRQ
                     VFGVPAVQTS"
     gene            6383..8101
                     /gene="argS"
                     /locus_tag="ACFMWP_001263"
     CDS             6383..8101
                     /gene="argS"
                     /locus_tag="ACFMWP_001263"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HFC5891862.1"
                     /translation="MNLHQTVEHEAVTAFAAAGIADNPIVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINLRLRPEFLARNIYAALNDA
                     RFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVVRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPTFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQAVVDDLVQKGL
                     AVEDDGAKVVFLEEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGVDEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWNAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATVPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKSEGATRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            complement(8037..8465)
                     /locus_tag="ACFMWP_001264"
     CDS             complement(8037..8465)
                     /locus_tag="ACFMWP_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891863.1"
                     /translation="MAERCRPGAKVRHGAAGGAHACRGKENREKRRAETLPEEKADLR
                     GGKRGMRRAESACVGRKGVIIFCLLACLLACLLAWRLFVSHFGRGGGYGVSRRFFQIR
                     MRMIRQLIAGLLSAIGRCGFTLRPTHQCPANPSLVSACRR"
     gene            8660..10078
                     /locus_tag="ACFMWP_001265"
     CDS             8660..10078
                     /locus_tag="ACFMWP_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC5891864.1"
                     /translation="MNIHALLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMNLIGAINL
                     VPFILTAPALYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHLAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGMPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFSGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPKSD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGVEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2368 a         2997 c         2574 g         2322 t
ORIGIN      
        1 cagtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc
       61 aagtgaatca gttccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt
      121 tgttaatcca ctataaattt aatccactat attttttgtt ccaaagtcaa aatatgccgt
      181 ccgaacattc gggcggcaga caaaacggca ctgcccgata aaggcagtgc cgttgtccgt
      241 ttcaaaccgt gaaacatcag cccaaattaa aggctttatg caataccctg gttgccagtt
      301 ccatgtattt ttcatcaatc aatacggaaa ctttgatttc ggaggtggaa atcatttgga
      361 tgttgatacc ctcttcggcg agcgtgcgga agattttggc ggctacaccg acgtgcgaac
      421 gcatacccaa accgactgcg gagactttgc acacggtgtc gtcgccgtcg atagaagccg
      481 cgccgatact gtcttgacgt tccgacagga tttccaaagt ctgcttgtaa tcgccgcgcg
      541 gtacggtaaa ggaaaaatcg gttgtgcctt cgctgccgac attttggata atcatatcga
      601 cttcgatgtt ggcatcggca accgcgccta aaatctgata ggcgacgccg ggtttgtcgg
      661 gtacgccgcg cacgttgatg cgggcttggt ttttgtcgaa tgcgataccg gttacggcag
      721 ctctttccat attgtcgtcc tcttcaaagg taattaaggt gccgttgccg ccgtcttgca
      781 ggctgctcag tacgcgcagg cgcactttgt attttccggc aaattctact gaacggattt
      841 gcaaaacttt cgagccaagg ctggccagct caatcatctc ttcaaacgtt accgtatcca
      901 tgcggcgcgc ttcgggtacg acgcgggggt cggtggtgta aacgccgtcc acgtcggtat
      961 agatttggca ttcgtctgct ttgagggctg cggcgagcgc aacggcggag gtgtcggagc
     1021 cgccgcgtcc gagcgtggaa atgtcgcctt cgctgctgat gccttggaaa ccggcgacga
     1081 tgacgacttt gccggcggca aggtcggcac gcattttttc gtcatcaatg ctttcgatgc
     1141 gggctttggt gtgggcggta tcggttttga gggcgacctg ccagccggtg tagcttttgg
     1201 cttccacgcc gatgtctttc aatgccatcg ccaaaaggcc gatggttact tgttcgccgg
     1261 tggacaaaac cacgtccaat tcgcgcggat cgggatgctc ctgcatttcg tgcgccaacg
     1321 cgaccaggcg gttggtttca ccgctcatgg cggatacgac gacgacgatg tcgtgtcctt
     1381 cggcgcgggc tttggcgaca cgtttggcca cgtttttaat gcgttcgggc gagcctacgg
     1441 atgtgccgcc gtatttatgt acgattaacg ccatgtttcg tgctttcttg tgtgggattg
     1501 gtcgggcagc atggtttgct ggaaaagcgg ctattattac tattttttac atgaagttca
     1561 agaacggact gcgctttccc gcctgccgtt tgacagcggt cagcgaaaaa cctgttcttt
     1621 cagattgttg acaaaatgcc gtctgaacgg ttttcagacg gcatccggac gacaatcagg
     1681 cggcggacaa cgcattttgc tggtgttgca gcagttcgcc tatgcctttt tgcgccagtg
     1741 caaccagttt gcccaattcg tccaaactga acggcgcgtc ttccgccgta ccttggattt
     1801 cgatgatttt tcccgatgcg gtcatgacga tattcacatc actgtcgcaa ccggagtctt
     1861 cgggataatc caaatccaaa agcggcacgc cgttcactac gcctactgac acagcggcaa
     1921 cggcttcgcg gatggggttt tcactcaaaa tgccgtctga aaccagtttg ccgacggcga
     1981 tttgcagcgc gacaaacgca ccggtaatcg aagccgtgcg cgtaccgcca tctgcctgaa
     2041 tcacatcgca gtcaatcaag atttgtcgtt cgccgagttt ttccatatct acgaccgcgc
     2101 gtagcgaacg cccgataagg cgttggattt cttgtgtgcg cccggactgt ttgcccgccg
     2161 aagcttcgcg gcgcatccgg gaagcagttg aggcaggcag catcccgtat tccgccgtta
     2221 cccagccttg gtttttaccg cgcagaaacg gcgggacgtt ttcatctatg gaagcggtac
     2281 aaatcacttt ggtattgccg cattcaataa ggcacgaacc gtccgtatgc ggcaggaaat
     2341 gaggggtgat tttgatatcg cgcaggctgt ccgcggcgcg cgagatgcgg atgtaatcag
     2401 gcatactgcc ctcccgttaa aaacagataa attaaaaagc cttaaatatg aaaaatcaca
     2461 tttaaggcct tcaaactgaa aatttctacg cctcttcggc tttgctgcgg ataatcaaaa
     2521 gcggcaggtg gctttggcgc attaccgttt cggcaaaact gcccattaaa aggtgcatca
     2581 gtccggtacg tccgtgcgta cccaacacca gcaggtcggc accgttttca tcggcataat
     2641 caaccaaatc ctgcgccatt tcacgcgcac ccttattggc aaccagcagg tgtttgacgg
     2701 tattttccac acccagttcc cgggcggtgc gctcggcggc atccaaaact tcgttgcctt
     2761 gcgcgacggc ggcggcttcg tagctttcgt gttgcaaaaa ttcgggggcg agcgccatat
     2821 attcggcagg attggcaacg tgtaccaaag tcagacgcgc accgttgacc ccggcaagct
     2881 cggcggcatg tttcagggca ttgatggacg tttcactgcc gtcaacggca acaaccagat
     2941 gtttgtacat atcgtattct ccttttgcac cgcctcgcgg tgccctcttg tcggatgggc
     3001 gcagggacag tttgcgccgt ttcattatag acccgctgtc gggctttata caacagccga
     3061 acagcccgac cgctttccag tataatatgc cgcttccgtg cagtcaggca ttttttgccg
     3121 gctttcgttc actttttgat ttgacgcaat cttgcaggat tcgaccatgt ccgacaacgc
     3181 tttgacctct tcgcgacgct tcggcggcat cgccagactc tacggagact ctgccttggc
     3241 gcacttttca caggcacacg tctgcgtagt cggcgtgggc ggtgtcggct cgtgggcggt
     3301 cgaggctttg gcgcggacgg gcatcggacg tttgactttg attgatttgg acaacgttgc
     3361 cgaatcgaat gtcaaccgcc agctgcacgc cctgaccggc gacttcggca aagcaaaagt
     3421 taccgccttg cgcgaacgcg tcgcccaaat caacccagga tgccaagtgt ttgaaattga
     3481 agatttcgtt accgaagaca atttgccgga atacttcgga aaaggttttg atttcgtcat
     3541 cgacgcgatc gaccaagtgc gcgtcaaagc agcaatggcg gcttattttg tggaacgcaa
     3601 acaaccgttt gtcctcagcg gcggcgcggg cggacaaaaa aatccggcgt taatccaaac
     3661 cgccgatttg agccgcgtaa cccacgaccc gctgcttgcc aacctgcgct acaccttgcg
     3721 gaaacgctac ggattcagcc gcgatacgaa agcaaatatg cgcgtgcctt gcgtgtattc
     3781 gaccgaaaat atcgtgccgc cgcagtctag ggaggcttgt tcggcagatg ccgctccgca
     3841 aggcttgtcg tgcgccggct acggtgcaag catgctcgtt accgcttcgt tcgggctata
     3901 ttgcgcacag gcggcggtgg aacacatcgc agacaaaaaa taagcaatgc cgtctgaaac
     3961 aggattcaga cggcatttga acaaacgcgg caatcaagct gtcggttcag aaaaaccaac
     4021 atcggcacgc ctaaaaccgt attcacaacc tgctcctttt caaaacattt gcatttaaaa
     4081 gccgttataa tgccgtctga acatctgccc gaccacatta tgcgtgaatg tcggcagatt
     4141 gttttctttt gtaaacttat attaaaatcc acttaccgat tcacgccatg ccgcccatcc
     4201 ctgccccatc cgcaccatcc gagcacactg tcgcatgggt attcggccaa cccgttaccg
     4261 atttgccgca ggatttgttt atcccgcccg acgcgctgaa agtcgtattg ggcagttttc
     4321 aaggcccttt ggatttgctg ctctacctta tccgcaagca gaacatcgat gttctcgata
     4381 ttccgatggt gaagattacc gagcagtatc tgcactacat cgcccaaata gaagcctatc
     4441 agtttgattt ggcggcggaa tacctgctta tggcggccat gctgattgaa atcaaatcgc
     4501 gcctgctgct gccgcgtacc gaaaccgtcg aagacgaaga agccgacccg cgtgccgagt
     4561 tggtgcgccg cctgctggct tacgaacaga tgaagctggc ggcgcagggt ttggacgcgc
     4621 tgccccgagc cggacgggat ttcgcgtggg cttacctgcc gctggaaatt gccgtcgaag
     4681 ccaagctgcc cgaagtctat attaccgact tgacgcaagc gtggctgggt attttgtctc
     4741 gggcaaaaca cacgcgcagc cacgaagtaa tcaaagaaac catctccgtg cgcgcgcaaa
     4801 tgacggcaat cctgcgccgt ttgaacggac acgggatatg caggtttcac gacctgttca
     4861 atcccgaaca gggcgcggct tacgtggtcg tcaacttcat cgcactgttg gagcttgcca
     4921 aagaaggttt ggtcggaatc gtacaggaag tcggtttcgg agaaatccga atcagcctca
     4981 atcatgaggg ggcacattca gacggcattt ccggcacacg gggcgggcgc gatgtgttct
     5041 aatacgcccc aagccgccac caaaaatcgg gagacacgcc atatgaccgg catcatacat
     5101 tcgctgcttg acaccgacct ctacaaattc actatgctgc aagtggttct gcaccagttt
     5161 ccgcagacgc acagccttta cgaattccgc tgccgcaacg cctcgaccgt ctatccgctt
     5221 gccgacatca aggaagactt ggaagccgaa ctcgacgcgc tctgccggct gcgcttcacc
     5281 cacgacgaac tcggctatct gcgctccctg cgtttcatca aaagcgactt tgtcgattat
     5341 ctcgaactct tccagctcca acgccgcttt gtcgaagtcg gcaccgatgc cgaaggccgt
     5401 ctgaacatcc gtatcgaagg ccccatgatt caagcgatgt tctttgaaat cttcatcctt
     5461 gccattgtca acgaacttta cttccgccgc ttggaaaccc ctgcagtcat agaagaaggt
     5521 gaacgtcggc ttcaagccaa agccgcgcgt ctgaaagaaa tagccgccac acagaatccg
     5581 gacgatccgc ccttcctgat ttccgacttc ggcacacgcc gccgctacaa cctcccatgg
     5641 caggaacacg tcatccgcac cctgcttgaa gccgcccccg gcatcgtacg cgggaccagc
     5701 aacgtttatc tcgccaaaaa actcggcatt acccccatcg gcaccatggc gcacgagttc
     5761 ctgcaggcat tccaggccct cgacgtacaa ttgcggaatt tccaaaaagc cgcgctcgaa
     5821 agctgggtac acgaataccg cggcgacctc ggtatcgcat tgaccgacgt ggtcggcatg
     5881 gatgccttcc tgcgcgattt cgacctttat ttcgccaagc tcttcgacgg tttgcggcat
     5941 gatagcggag acccctacga atggggggac aaagcctaca cgcactataa aaaactcaaa
     6001 atcgacagcc ggaccaaaat gctgaccttc tccgacggac tggatatcga ccgatcttgg
     6061 gctttgcacc aatatttcaa agaccgcttc aaaaccagtt tcggcatagg caccaacctg
     6121 accaacgata tggggcatac gcctttgaat atcgtgttga aactggtcga atgcaacggt
     6181 cagtccgtcg ccaagctctc cgattctccc ggaaaaacca tgaccaacaa caatactttc
     6241 cttgcctacc tgaggcaggt attcggcgtt cccgccgtac aaacatccta gtccccggca
     6301 acaatcccac aattcctatt gctgccgtac aaattctttt aaaataccga ctgatttgaa
     6361 tttaaccgaa agaccgaact tcatgaacct acaccaaacc gtcgaacacg aagccgtcac
     6421 cgcctttgcc gccgcaggca tcgccgacaa ccctattgtt ttgcagccga ccaaaaacgc
     6481 cgaacacggc gatttccaaa ttaacggcgt gatgggtgcg gcgaaaaaag ccaaacaaaa
     6541 tccgcgcgaa ttggcgcaaa aggtagccga agcattagcc gacaacgccg taatcgaaag
     6601 cgcggaagta gccggtccgg gcttcatcaa cctgcgcctg cgccccgaat tccttgcccg
     6661 aaacatttat gctgccttaa acgacgcgcg tttcggcata gcaaaaaccg acaaaccgca
     6721 aaccgtcgtt atcgactatt cctcgcccaa tctggcaaaa gaaatgcacg tcggccacct
     6781 gcgttccagt atcatcggcg acagcatttc gcgcgtgttg gcatttatgg gcaacaccgt
     6841 cgtccgccaa aaccacgtcg gcgactgggg tacgcagttc ggcatgttgg tcgcttattt
     6901 ggtcgagcag caaaaagaca acgcagcgtt cgagctagcg gacttggagc agttttaccg
     6961 cgccgccaaa gtacgctttg acgaagaccc tacctttgcc gacaccgcac gcgaatacgt
     7021 tgtgaaactg caaggcggcg atgaaaccgt gttggcgttg tggaaacagt ttgtcgatat
     7081 ttcactctcg cacgcccaag ccgtgtacga cacgctgggc ttgaagctgc gccctgaaga
     7141 cgtggcgggc gaatcgaaat acaacgacga tttgcaagcc gtggtcgatg atttggttca
     7201 aaaaggtcta gcggtcgaag acgacggcgc gaaagtcgta ttcttggagg aattcaaaaa
     7261 caaagaaggc gaacctgccg catttatcgt acaaaaacaa ggcggcggct tcctttatgc
     7321 ttccaccgat ttggcgtgcc tgcgctaccg cgtcggtacg cttcatgccg accgcctgct
     7381 gtacgttgtc gaccatcgcc aagccctgca cttcgagcaa ctctttacca cttctcgcaa
     7441 agcaggctat ctgccggaaa acgtcggcgc ggcatttgtc ggcttcggca cgatgatggg
     7501 caaagacggc aaaccgttca aaacgcgcag cggcgacacc gtgaaactgg ttgacctgct
     7561 gaccgaagcc gtcgagcgcg ccaccgcttt ggtgaaagaa aaaaatcccg aattgggcgt
     7621 ggatgaagcc gctaaaatcg gcaaaaccgt cggcatcggc gcggtcaaat acgccgattt
     7681 gagcaaaaac cgcaccagcg attatgtgtt cgactggaac gccatgctct cgtttgaagg
     7741 caataccgcc ccctacctgc aatatgccta cacccgcgtg caaagcgtgt tccgcaaagc
     7801 aggcgaatgg gacgcaaccg tgccaaccgt tttgaccgaa cctttggaaa aacaactggc
     7861 cgccgagctg ctgaaattcg aagacgtgct gcaaagcgtg gcggacacgg cgtatccgca
     7921 ctacctcgcc gcctacctct atcaaatcgc taccttgttc agccgcttct acgaagcctg
     7981 cccgattctg aaatcagaag gcgcaacccg caacagccgc ctgcaactgg caaaactcac
     8041 cggcgacacg ctgaaacaag gcttggattt gctgggcatt gatgtgttgg acgtaatgta
     8101 aaaccgcacc gcccgattgc ggacaacagc cccgcaatca actggcggat catcctcatc
     8161 cgaatctgaa aaaagcggcg cgatacaccg tatccgccgc ccctcccaaa atgcgaaaca
     8221 aacaaacgcc aagcaagcaa gcaagcaagc aagcaagcaa gcaagcaaaa aattataacc
     8281 cccttcctgc cgacgcacgc actttccgcg cggcgcattc cccttttccc gcccctcaaa
     8341 tccgcctttt cttcaggcag ggtttcagcc cgcctctttt ccctgttttc ctttccccga
     8401 cacgcgtgcg cgccccctgc cgcaccgtgc cgcactttcg cgcccggacg gcatcgttcc
     8461 gccatccggt tctctgtttc aaatacccct gtttcagaaa gaaatgcaga tgtttcaaca
     8521 cacaggacga catataaagc accgccctat gtgttgccct gatttggaag gggttacacc
     8581 cttcctaaat atagtctgat cctgccgccc cgaaggacag atgtccgagt ggcgaagttt
     8641 caaccgaaaa ggaaatacga tgaatattca cgccctgctc tccaaacaat ggacgctgcc
     8701 gccattcctg ccgaaacggc tgctgctgtc cctgctgata ctgctggccc ccaatgcggt
     8761 tttttgggtt ttggcactgc tgaccgccac cgcccgcccg attgtcaatt tggactacct
     8821 tcccgccgcg ctgctgatcg ccctgccttg gcgtttcgtt aaaattgccg gcgtattggc
     8881 gttttggctg gcggttttgt ttgacgggct gatgatggtg atccagcttt tcccttttat
     8941 gaacctcatc ggcgccatca acctcgtccc cttcatcctg actgcccccg ccctttatca
     9001 gataatgacc gggctgttgc tgctgtatat gctggcgatg ccgtttgtgt tgcagaaagc
     9061 cgccgccaaa accgacttcc gacaccttgc cgtctgcgcc gccgtcgtgg cggcagccgg
     9121 ctatttcacc ggccatttga gttactacga ccgggggcgg atggccaata tcttcggcgc
     9181 aaacaacttc tattacgcca aaagtcaggc gatgctctac accgtcagcc agaatgccga
     9241 ctttattacc gccggcctgg tcgaccccgt cttcctcccc ttgggcaatc agcagcgtgc
     9301 cgccacgcat ctgaacgagc cgaaatctca aaaaatcctc tttatcgtcg ccgaatcttg
     9361 ggggatgccg gccaatcccg aacttcaaaa cgccactttt gccaaactgc tggcgcaaaa
     9421 agaccgtttt tcagtttggg aaagcggcag ttttcccttt atcggcgcga cggtcgaagg
     9481 cgaaatgcgc gaactgtgcg cctacggcgg tttgcgcggg tttgcactgc gccgcgcgcc
     9541 cgacgaaaaa tttgcccgct gcctccccaa ccgtttgaaa caagaaggtt acgccacctt
     9601 tgcgatgcac ggcgcgggca gttcgcttta cgaccgcttc agctggtatc cgagggcggg
     9661 ctttcaagaa atcaaaaccg ccgaaaacct gatcggtaaa aaaacctgcg ccattttcag
     9721 cggcgtgtgc gacagcgagc tgttcggcga agtgtcggca tttttcaaaa aacacgacaa
     9781 gggactgttt tactggatga cgctgaccag ccacgccgac tatcccaaat ccgacatttt
     9841 caaccacagg ctcaaatgca ccgaatacgg cctgcccgcc gaaaccgacc tctgccgcaa
     9901 tttcagcctg cacacccaat ttttcgacca actggcggat ttaatccaac gccccgaaat
     9961 gaaaggcgtg gaagtcatta tcgtcggcga ccatccgccg cccgtcggca acctcaatga
    10021 aaccttccgc tacctcaaac aggggcacgt cgcctggctg cacttcaaaa tcaaataaca
    10081 acaatgccgt ctgaacgcac caacagcctt cagacggcat tttgcagaca ggccgacccc
    10141 ctcaagccca cttttttcat catttccgat aaattgcttt gtatagtgga ttaacaaaaa
    10201 ccagtacggc gttacctcgc cttagctcaa agagaacgat tctctaaggt gctgaagcac
    10261 c
//
LOCUS       DAXHKG010000066        10176 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.066, whole genome shotgun sequence.
ACCESSION   DAXHKG010000066 DAXHKG010000000
VERSION     DAXHKG010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10176
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.066"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(28..102)
                     /locus_tag="ACFMWP_001266"
     tRNA            complement(28..102)
                     /locus_tag="ACFMWP_001266"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(67..69),aa:Glu,seq:ttc)
     gene            complement(120..196)
                     /locus_tag="ACFMWP_001267"
     tRNA            complement(120..196)
                     /locus_tag="ACFMWP_001267"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(160..162),aa:Arg,seq:acg)
     gene            complement(306..1979)
                     /gene="recN"
                     /locus_tag="ACFMWP_001268"
     CDS             complement(306..1979)
                     /gene="recN"
                     /locus_tag="ACFMWP_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HFC5891865.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSREQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIALLPSSPTSHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            complement(2163..2765)
                     /locus_tag="ACFMWP_001269"
     CDS             complement(2163..2765)
                     /locus_tag="ACFMWP_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HFC5891866.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            complement(2866..3807)
                     /gene="ylqF"
                     /locus_tag="ACFMWP_001270"
     CDS             complement(2866..3807)
                     /gene="ylqF"
                     /locus_tag="ACFMWP_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HFC5891867.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            complement(3888..4742)
                     /gene="rapZ"
                     /locus_tag="ACFMWP_001271"
     CDS             complement(3888..4742)
                     /gene="rapZ"
                     /locus_tag="ACFMWP_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HFC5891868.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEEAVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYVVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            complement(4723..5685)
                     /gene="hprK"
                     /locus_tag="ACFMWP_001272"
     CDS             complement(4723..5685)
                     /gene="hprK"
                     /locus_tag="ACFMWP_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HFC5891869.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGNLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            complement(5689..6138)
                     /gene="ptsN"
                     /locus_tag="ACFMWP_001273"
     CDS             complement(5689..6138)
                     /gene="ptsN"
                     /locus_tag="ACFMWP_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HFC5891870.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            complement(6323..7213)
                     /gene="ubiA"
                     /locus_tag="ACFMWP_001274"
     CDS             complement(6323..7213)
                     /gene="ubiA"
                     /locus_tag="ACFMWP_001274"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HFC5891871.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVGNSVPVEAWILFTANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            complement(7243..7719)
                     /locus_tag="ACFMWP_001275"
     CDS             complement(7243..7719)
                     /locus_tag="ACFMWP_001275"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HFC5891872.1"
                     /translation="MEHLFGKWLPDLPAAVSDGIDLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDRIPVVEARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            complement(7734..8381)
                     /gene="bioD"
                     /locus_tag="ACFMWP_001276"
     CDS             complement(7734..8381)
                     /gene="bioD"
                     /locus_tag="ACFMWP_001276"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HFC5891873.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKRRLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEIVLVEGAGGLMVPLTEKLLTIDYIQQQAYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLVFNHIHDSRDAHIAQYSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            complement(8378..9679)
                     /gene="bioA"
                     /locus_tag="ACFMWP_001277"
     CDS             complement(8378..9679)
                     /gene="bioA"
                     /locus_tag="ACFMWP_001277"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HFC5891874.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLVDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYRQVRGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDEADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            complement(9892..10131)
                     /locus_tag="ACFMWP_001278"
     CDS             complement(9892..10131)
                     /locus_tag="ACFMWP_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891875.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEELCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
BASE COUNT         2355 a         2790 c         2582 g         2449 t
ORIGIN      
        1 tccgatataa tcggaggcat tttgaattgg cacgcccacg gggaatcgaa ccccggttac
       61 cgccgtgaaa gggcgatgtc ctaaccgcta gacgatgggc gcgtattgta ttttcttact
      121 ggcgcacccg gagcgattcg aacgcccgac cctctggttc gtagccagat actctatcca
      181 actgagctac gggtgcagca caatcacttg ttcaagtgat taagaaagcg tgataatacg
      241 gatttatctg agttctgtct attgttttag acttttattt ttagttattt tttaactgat
      301 tgattttaaa ataaactatt tttcgacgca agttgcagca attctgccgc atgttgccgc
      361 gtcgtatcgg taatgacttc tccgcccaac atacgggcaa cctcttcgac ccgttggatt
      421 tcatccaata tactgatttc gctgacggtt tgctctccct cgctgtgctt gcgcacccgc
      481 cagtggtttt cgccgcagga tgcgacttgc ggaagatggg taacggcaag cacctgatgt
      541 tttctgccca acgcacgtaa tgccttgccg accatttcag ccactccccc tccaataccg
      601 gtatcgacct catcaaaaat cagggtggga acttgggtat attggctggc aacaacctgt
      661 aaggcaaggc tgatacgcgc caattcgccg ccggaggcaa ctttattcag cggacggggc
      721 ggattgcctt tgttggcggc aacttgaaac tgtacttgct ccaagccgtg cgacgtcggg
      781 gaagacggca gtagggcaat gtcaaaacgc gcacctttca tggcaaggtg ttgcatatgc
      841 tcggtcgttt cgccgctcaa acgctctgcc gcctgatggc gcatggcaga aaggatgtgg
      901 gcagcttcct gatattcggc aaaattgtgg gcaacattat gctcgagcgc gtccaaatcg
      961 gcggcagctt gcaggctttg caggcgttct tcgatttctg ccaacttggc aggcaactct
     1021 tcaggctcga tccggtattt ccgcgccatc cccatcagct cgcccatgcg ctgttcctgt
     1081 gccgccaatt cattgggatt gatgtcgctg cgacctgcca catcgcgcat attggcactg
     1141 atttcgccca attcggcttc gatgcttgcc aacatattca ggctctcggc aaagcgcggc
     1201 tcgatgtttt gcagattggc caatagtttt tgacattgat agatatggcg ttggatgccg
     1261 ttgtcgccgt caatcttgct tccgacttct tcggcagcct gcaacagctc ggcagaatgg
     1321 gcaaggctgt cgtggctttg gctgagggct tcccattcgc cttgtttaat gtccaactga
     1381 ttcagttcgt taaactgcca ttccagacgc tcccgctcga taatgacggc atcggcgtgt
     1441 tcctgcgcct cttggagggc ttttttcgca ttggcccaat tttgataaag ctgcctgacg
     1501 gtttccgcct gctccctgct acccgcaaat gcgtccaaca attcgcgctg ggcggcttcc
     1561 tgattaagcg aatgatgggc gttttgcccg tggatgtcga taagctggct accgacggat
     1621 ttgagttgcg ccaaggtagc ggcctgattg ttgataaagc tgcggctttt gcctttggca
     1681 tcgataatgc ggcggatact gagttcttct tctccgtcgt ttaaaagccc ctgttcatac
     1741 aattctgctt ttaaaacagg caaatgggaa atatcgaaca atgccgacaa ctgcgcttct
     1801 tttgcaccgc tgcggacttg gctgtaatcg gctttgtcgc ccaacagcag accaatcgca
     1861 tccaaagtaa tggacttgcc cgcgccggtt tctccggtca atacggtaaa gccgctttga
     1921 aaatccagat tcagattttc aacaatgaca aaatcacgca aagaaagtgt tagaagcatt
     1981 gtgaggattc cttagcaatt ctaccgacaa aagcaatatc aactttagat atacgaatta
     2041 taactaagat ttttttaaat taaaaataag ttttccttaa ttttgcttag tacttgtttt
     2101 tatctgctta tttgttgcaa tgccgtctga agcaatgtgc gtttcagacg gcatttggaa
     2161 tttcagttgg gcagggtatc ggacggtacg gcttccggct cttcttcatc cgtaggcggc
     2221 atttccatta aatcgggtaa aaccagttcg cccagttcgg tcagcggcgg aagttcttcc
     2281 agaccgtcca agcgcaaatc gctgagaaaa gttgccgttg tcgcccacaa tgcgggtttt
     2341 cccaatgtgt cccgatgtcc gatgacttca atccaccccc gatcctgcaa ggtctgcatc
     2401 acgttctgcg acaccgccac gccgcgtatg ccctcgatgt cgccgcgcgt tacgggctgc
     2461 tggtaggcga taatcgccag tgtttccatc acggcgcggg agtaacgcgg cgcacgctgt
     2521 tcttgcaggc tgcccagccg ctcgaatgcc gtctgaacaa tctgaaaacg ccagccctct
     2581 tgcgtatgca ccagttgcaa cgccctatcc tgccaacgcg ttttcaactg cgccaacaca
     2641 tcaatcagtt tgtcctgcga cagtggcggc acacacaatt cgcgcataga tttttcggtc
     2701 agcggttcgg tttgggtcag cagtgcggct tcaattagtg cgtcgggaga aattttgtcg
     2761 gtcatacggg tatccgtgct gaaacggcat gggtttggat atgccgtctg aaatcggttg
     2821 gagtagagag aagctgcctg aaaaatattt ttcagacggc attctttatg cttccgaagg
     2881 cttctgccct ttacgctctg cttttctggc ttcgcgtatg gctttgagtt cggcttcttt
     2941 ctgacgggct tttttgagcc aagtttccca ttggttcggc gtttcgaggg tgattctgcc
     3001 gattttgcct tcacggaagt cggtgaggat gttttcggcg gctttttggt agttgatccg
     3061 tccgccgctg aggactgcgc cgcgtttttt ggctatccat tcgagccaaa cgttttcgtc
     3121 ccagtggctg ctggggtctt tgtcggcttg gtagcgttct tgcaacatag ggaggtagtg
     3181 gcggcggagg tagtctaaaa gttcgagggc gacttcttct tcgtccaacg cgttgcgtcc
     3241 gactgcgccg ccggcggcaa ggttgtagcc gccttcttcg acgatgattt tcggccacag
     3301 cattccgggg gtgtcgtaga gccagaagtc gtcggcaagg aaaaggcgtt gttcggcttt
     3361 ggtgatgccg ggttcgttgc cggttttggc ggattttttg cctatcatgc cgttgatgag
     3421 ggtggatttg ccgacgttgg gaatgccgca aatcaagacg cgcaagggtt tgtctatgcc
     3481 ttgccggtgg ggaatcatcg cgcggcaggc ttgggtgatt ttgccgtgtg cgccggtttc
     3541 ggaggaatcg agggcaatgg cgcgcgtgtc ggggcggctg ttgtagtggt caagccagac
     3601 ctttgtgcgt tcggggtcgg caagatcttg tttgtttagg attttaagtt tgggtttgcc
     3661 tttggaaagc tgggcaagca gggggttttc gctggaggcg ggcatacgcg cgtccagcat
     3721 ttcaatcacc atatcaacgc tttttgcacg ctcggcgatg gcttttttcg ccttgttcat
     3781 atggccggga aaccattgga ttgccatgtc tgttctttct tttcaatatt tgaaatgccg
     3841 tctgaaacgg aggacggggt ttcagacggc ataatggttt gacggaatta gcggtctgac
     3901 aggttttgcg cctgtctgtg ccgtatcagc aattcataac gccctttcaa ccttcgggcg
     3961 agtttttcga caacatagac ggaacggtgc tgcccgccgg tacagccgat ggcgacggta
     4021 acgtagctcc tgctttcatc ctccaaacgc ggcagccaat gcgtaacaaa cctttcgatg
     4081 tcgtcaacca tttcctgcac aagcggctgt ccgtccaaat aatcccaaac gggcttgtcc
     4141 ataccggtgt aaggcctcaa ctcgggatcg taatacgggt tgggcagact gcgcatatcg
     4201 aacataaaat ccgcgttgtt tggcacaccg tatttgaacc cgaaggactc caaaatcacc
     4261 agcagcccgg tacgttcgac cttcagccac tgccggactg catggcggag ctgttgggca
     4321 ttcatcttgg aagtgtcgat acaataggcg atttctttaa gcgggaacag ccattcccgt
     4381 tctttcttta agctttccaa caaggtcata tcctgattac tcagagggtg gcctcgcctg
     4441 gtttcggaaa accggcggac cagcacggcc tcttccgcct cgacaaacaa aacttcaacc
     4501 ctgtgcccca gtccgcgcag agaggcaatc tgttcccgcg cctgtccgat gtctatgccg
     4561 gaacgcacat cgacgctgac cgccaattcg gtttcgtccg cacgctcgat atgatacgac
     4621 accagcgcgg gcaacatttc caagggcagg ttgtccacgc agaaataacc cgaatcttcc
     4681 atttggcgca gtgcgacgga tttgcccgaa ccggacaacc cgctaatcag gacgattttc
     4741 atgattctgt tcgttttctt taagctgcgt ctgatggcgt tccaaaaatt cgcgcgtact
     4801 atccttaccg cgcaactgaa gaatataatt gcgcaccgcc gcttcaacca atacggcaag
     4861 gttgcgtccg accgcgacag gcagcgttac cgaacggacg ttgacgttga ggatggattc
     4921 ggtttcggta cggatactca aacggtcgag ctgcttcata tactcgtcgt ccgcctcgac
     4981 caaattgata atgagttgca ggattttttt ggggcggatg gaagtttcgc cgaaaatatg
     5041 gcggatattg agtatcccca agccgcgcac ttccaaaaaa tcgcgcagca taggcgaaca
     5101 ccgcccttcc agcgtttccg ggccgatgcg gaacagctcg accgcatcgt cggcaatcag
     5161 gctgtggccg cgcgaaatca gctccaacgc caattcgctc ttacccaaac ccgaatgtcc
     5221 ggtaatcagc acgccgattt caaacacatc gagaaatacg ccgtgtttga cggacgatgc
     5281 cgccagggtg cgttgcaggt aaatccgcaa cacgtccatc agataggggc tttcgagttt
     5341 ggaagtcagc agtggaatat cgtttttgtg gcagtagtcg cgcagtcccg gggaaaccgg
     5401 caagccgttt gccacaatga ccaaagacat agaaatgtcg aacaggtttc cgaactgata
     5461 acccgtttcc cccgattcga ggcggttcag atattccgac tccgccaaac cgaccacttg
     5521 gatttggttg gggtggatga aattcaggtg tccgaccaaa gcgaggacgg gcttgtccgc
     5581 ctctacgccg atacggttgt ccgcacccga attgccggcg gcccaggcga gttgcagttt
     5641 gtattggttg tcgtcaaaca gtcggcggac agagatactg ggcatatttt attcttcggt
     5701 caggatggcg cgggcttctt ccgcagaaga aaccgtcatc agcgattcgc ggatgctttt
     5761 ttgggaaaac ttgccggcca gtttggacaa tacctccaaa tgctcacccg tcgcattttc
     5821 cggaaccagc aagataaaaa ccagggaaac cggtttgccg tccggtgcgt caaatccgac
     5881 gggttcgcgc gtgcggatga acgcgcccgt cgcctgcttc acgccggcat gacggccgtg
     5941 cgggatggca acgccctgcc ccaaaccggt cgaaccgagt ttttcacggg caaaaagaca
     6001 ttcgaaaaca tcagcatggg acaatgagga ttcgcgttcc aaaagcaggc ccgcttcctc
     6061 aaacagcctt tttttactgc ccacctccat atccaaaaca atatgggaca aaggcaaaat
     6121 ttcgccgata aggctcataa gcttctcttt tcagacatcg caaaacagaa agattgtacc
     6181 gactgccggg gcaaatctca atcccgcata cggtacgggc tgacataaca cagcgtttta
     6241 aaaacatatt ttaacgcttt tcggcacaga tagaaatgcc gtccaaagca gtttacggct
     6301 cttcagacgg cattgccctg ccttatttcg cgaaaaacgt atgggcaaaa atggcggtaa
     6361 accacaccca accaattctg ttgtttgcca aaaacgtttc aaaacagatt tgccggacgc
     6421 ggcttttgat ggcggcatat tggcggtatt gcagcagcag gacgatgggg attgccgtcc
     6481 aatatgccca tgccgcaccg ataaccgccc ccaatactgc catcagcagg gtaaagccgc
     6541 catgacacag cataacggcg gcgatgtcgt aacgcccgaa cgtgacggcg gaggttttga
     6601 tgccgatttt caaatcgtcc tctttgtccg ccatggcgta aacagtgtcg taagccagtg
     6661 tccataaaac attggcggta aaaagtatcc atgcttcaac ggggacgctg ttgcccactg
     6721 cggcaaacgc catcgggata ccgaaggaaa aggcaagccc gagatagagt tggggaatcg
     6781 gaaaaaaacg tttggtaaac gggtaagtca gcgcaagaaa cagggcgggc aggctcatca
     6841 gccaagtcag atgattcagc ggaatcaggc acaatgcggc aagcaggcac aaaaatgccg
     6901 tcagcagcag ggcttctttt ttcttgaccc tgccctgtgc gaacggacgg tttttggtgc
     6961 gctcgacagc accgtcaaaa tcgcggtcgg caaaatcgtt gatgacgcaa ccggcactgc
     7021 gcattaaaaa cgtaccgatt gtaaacgccg ccaataccgc caaatcggga atgccgtctg
     7081 aagccagcca caatgcccag taggtcggcc acagtaaaag cagcgtccca atgggcttgt
     7141 ccgcccgcat caggcgcagg tacacatcca aacgatcgga cagtcgtaaa aataaagggg
     7201 atttaggatt catattgccg cacagcttga aaaaacggta ttttatccga taaagcgttt
     7261 cagttcgggc agaaaatact cggtcagcag catttcctcg ccgtgacggg aaaaccgaga
     7321 acgccgcgcg gcaaagtacc gtccgcatcc ttcgccggaa acggcaaact caaacgccga
     7381 acgcgcccct tccaaatcgg cttgaaacag acgctcgccc aaagggcgcg tgccgcagtc
     7441 caaaatgttt tgccaaaacg ccgaacctat ccggcattcg ctccttgcct caacaacagg
     7501 gatacggtcc agcttcaaca aaacttcgcg caccagcctc cctccgcatt ccgtctccaa
     7561 ttcgcccagt ttcagcagtt ccaccgaaaa tgtatgcggc aaggcgcgca atgcggcggt
     7621 cagcgaccgg gctttcaata accggctcat cggcaggtcg atgccgtctg aaacggcggc
     7681 gggcaagtcg ggcagccatt tcccaaatag gtgttccata tttttcccaa tctttatacc
     7741 gcgtctgttt ttgccaactc catccattcc gcttcggaaa aatcggcttt cagacggcat
     7801 ttcaagtagc tcaggctgta ttgggcgatg tgtgcgtcgc ggctgtcatg aatatggttg
     7861 aatacgaggc tgtgcaagcg aatgccgtat tgtttgagcg cggcgaaact gagcagggtg
     7921 tgattaatgc tgccgagccg accgctggta acgaggatga cgggataagc ctgttgctga
     7981 atataatcaa tggttaacag cttttccgtc agcggaacca tcaaaccgcc cgcgccttcg
     8041 accaagacta tttcgtattg tgccgccaat tcttgcgtag cggtacggat tttgtccaag
     8101 tccaaagccc tgccgtccag acgggcggcg agatggggcg aggcgggata gctgaagatt
     8161 tcaggcatag tcagccgccg tttgtcggct tcctgcatgg gtatgcccat gattttgcgg
     8221 tgaacggcga tgtcttcggc gatgtcttgg caaccggttt gcacgggctt ttgcgtaatc
     8281 acgcttttgc cctgctgcaa caattgtttt gccaacatac cggtggcgac agttttgccg
     8341 atgtccgtgt ctatgccgct gacgaagtaa acgcctttca tttgctgtgt tccttcaaga
     8401 tttgcacggt tttgtcggca agtttggtca aaacgccgtc tgaaataata tacggcggca
     8461 tcagatatac cagcctgccg aacgggcgca cccaaatgcc ctgcgccacg caatctgctt
     8521 gaaaacgcgc catatccacg cctttatcca gctcgatcac gccgatggca cccaaaacgc
     8581 gtacgtcttt cacgccgcga atgtcccacg cggctttcag acggcctttt aagatgcttt
     8641 caatgcggcg gatatttgcc tgccagtctt gagacaaaag cagtttgacc gaagcgcagg
     8701 caacggcaca cgccagcggg tttgccataa acgtcgggcc gtgcataaac acgcccgctt
     8761 cgccgcgcga aatcgtttcg gtaacttttt gcgaagtgat tgctgccgcc agcgtcatat
     8821 agccgccgct caaacccttg ccgatgcaca taatatccgg cacgacctcc gcgtgttcgc
     8881 aggcaaacat cttgcccgtg cgcccgaatc cggtggcgat ttcatcaaaa atcaaaacga
     8941 tatcaaactc gtcgcacaaa tcgcgcaatc cgcgaagata ctgcggatga taaaaataca
     9001 tgccgcccgc gccctgcacg accggctcta aaataaaggc ggcaatatcc gcatgatgca
     9061 cttcaaacaa ggcgcggaca ggctgcaaat ccgcctcgtc ccattcatcg tcgaaacggc
     9121 ttgtcgggtt atcgacaaaa taacgctgcg gcaacgcgct gccgaaaata tggtgcatcc
     9181 ccgtttccgg atcgcagacg gacatcgcgt tccaagtatc gccgtgatac ccgcgccgca
     9241 ccgtcgcaat attctgcttc gccgtcaacc cccgcacctg ccggtattgc accgccattt
     9301 tcaacgcaac ttccaccgaa accgaacctg aatccgcata aaaaatacgg tccaacccct
     9361 gcggcaaaat cccaaccaac aatttaccca gctccaccgc aggctcatgc gtcaaaccgc
     9421 cgaacatcac atgcgacatt tgtttaatct gcgtctcaac cgcctgattc aaaacaggat
     9481 gattgtaacc gtgtatcgca caccaccagg acgacatccc gtcaaccagc cgcgtgccgt
     9541 ccgccaattc gataaacacc ccttctgcac gtttgacagg ataaacggga agcggatcgg
     9601 tcatggaagt atagggatgg agcagatggg tacggtcgaa atcaagtaat gatgatgtgt
     9661 gttgatgttc agacggcata agtttctctc ttttcttatt gctgcattca aacgcaaacg
     9721 cgtattctac tccgacagac cgtttcccac acctctccat ccgtttcggg cgcaaaaccg
     9781 cgaaacaaat cgtccgcagt ataagcgcac accgtttcgc attccccaag cccgattgga
     9841 atcagacgac ccaacgccca atattgtttc acacagcctc cgcccaacgc ttcaatcagt
     9901 catagacaaa acggcaatcc atacgataca gatcatagca acagccatcg caacagcgtt
     9961 agcaaaatca ggggactccg acataggcgc atagcatcta ccgatgcaca gctcctcatt
    10021 cggctctatg aataccatac ccatcacaaa atccaccgcc aaaaccaggc acggcttctt
    10081 atacttatga tagatttcca ccatcctgcc ccatatatcc caaacattca taccgcatat
    10141 cccgcaggca acaaattccg attgaaggtt acagcc
//
LOCUS       DAXHKG010000067        10099 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.067, whole genome shotgun sequence.
ACCESSION   DAXHKG010000067 DAXHKG010000000
VERSION     DAXHKG010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.067"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(129..464)
                     /locus_tag="ACFMWP_001279"
     CDS             complement(129..464)
                     /locus_tag="ACFMWP_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC5891876.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            593..1498
                     /gene="mtrA"
                     /locus_tag="ACFMWP_001280"
     CDS             593..1498
                     /gene="mtrA"
                     /locus_tag="ACFMWP_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HFC5891877.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     VVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1560..2048)
                     /locus_tag="ACFMWP_001281"
     CDS             complement(1560..2048)
                     /locus_tag="ACFMWP_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC5891878.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2195..3097
                     /locus_tag="ACFMWP_001282"
     CDS             2195..3097
                     /locus_tag="ACFMWP_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC5891879.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPCWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3138..4268)
                     /locus_tag="ACFMWP_001283"
     CDS             complement(3138..4268)
                     /locus_tag="ACFMWP_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5891880.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4473..7097
                     /gene="alaS"
                     /locus_tag="ACFMWP_001284"
     CDS             4473..7097
                     /gene="alaS"
                     /locus_tag="ACFMWP_001284"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HFC5891881.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGDAYPELKEKQVQIEEALKNEESRFAQTLETGMALLENALAKGSKKLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGRHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPAVLDSVKDWVGAKLV"
     gene            complement(7186..8208)
                     /locus_tag="ACFMWP_001285"
     CDS             complement(7186..8208)
                     /locus_tag="ACFMWP_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC5891882.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VVFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(8262..9413)
                     /locus_tag="ACFMWP_001286"
     CDS             complement(8262..9413)
                     /locus_tag="ACFMWP_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC5891883.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQHLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
BASE COUNT         2505 a         2674 c         2391 g         2529 t
ORIGIN      
        1 cttacccctt gtttctcaaa tgccgtctga aaaaacggct gcatatgttg tctacaaaat
       61 atcgggaagc ataacaggca aaatgccgtc tgaaatattt tcagacggca tttcttatcc
      121 gaaacggatt atttttgcgt ttcaaccgct tccaatgcac gcagggcata agtgtaagcg
      181 gcaccggcat tcagggcgat ggcggttgcc aatgcgcctg cgatttcgct gtcggtcgca
      241 ccggctttgg cggcagcggc ggcgtgaacg ctgatgcagc tctcgcaacg agtggtaatg
      301 gcaacggcga tggcaatcag ttcgcgcgtt ttggcatcaa gtgcttcggc ggcggcggcc
      361 tgttccaatg cgccgtaggc ctgcagcatt ttaggatgcg ccttacccag ctcgccgaac
      421 gattttttaa ccaatgcggt atgttctttc caatctttaa acattttctt ttcctttctc
      481 ttgcgtttaa ccctgatacg cgcttgcgta tctgttttcg atgtgcgtat tattgcaatt
      541 attcagttgt gtttctcgtt taatcatctc attttatggt tcaaaaagat ttatggacat
      601 tctggacaaa ctggtcgatt tcgcccaatt gacgggcagt gtggatgtgc agtgcctttt
      661 gggcggacaa tggtcggtac ggcatgaaac cttgcaacgc gaaggattgg tacacattgt
      721 tacatcgggc agcggctatc tctgcatcga cggcgaaact tccccgcgtc cggtcagtac
      781 aggggatatt gtatttttcc cgcgcggctt gggtcatgtg ttgagccacg acggaaaatg
      841 cggagaaagt ttacaaccgg atatgcggca gcacggtgcg tttacggtca agcagtgcgg
      901 caacggacag gatatgagcc tgttttgcgc ccgtttccgc tacgacaccc acgccgattt
      961 gatgaacggg ctgcctgaaa ccgtttttct gaacattgcc catccgagtt tacagtatgt
     1021 ggtttcaatg ctgcaactgg aaagcaaaaa acctttgacg gggacggttt ccgtggtcaa
     1081 cgcattgtcg tctgtcctgc tggtgcttat cctgcgcgcc tatctcgaac aggataagga
     1141 tgtcgaactc tcgggcgtat tgaaaggttg gcaggacaaa cgtttgggac atttaatcca
     1201 aaaggtgata gacaaaccgg aagacgaatg gaatgtcgac aaaatggtgg cggctgccaa
     1261 tatgtcgcgc gcgcaactga tgcgccgttt caaaagccgg gtcggactca gcccgcacgc
     1321 ctttgtgaac catatccgcc tgcaaaaagg cgcgttgctg ctgaaaaaaa acccggattc
     1381 ggttttgtcg gtcgcactgt cggtaggctt tcagtcggaa acgcacttcg gcaaggcgtt
     1441 caaacggcaa tatcacgttt cgccgggtca ataccggaaa gaaggcgggc aaaaataaat
     1501 cggggcttca aacgcaaatg ccgtctgaaa aggctttcat acagcatttg cgtaccgcgt
     1561 catttcaagg gctgcatctt catcacttcc atcaaaaagt tggtaaatgc ggggttgttg
     1621 ggtttgacat ccatattttt ccaacgctgc tgccagccgc gcaaggcatt ctggatatac
     1681 agcttggact gttccgtatt gattgcgccc cgctggctgt ctatcgccga acgcaggtag
     1741 atttcataca tactgtcatc gacggcattg cgtccgacca ggcgttttct gaagttgttc
     1801 agatattgcg ccgcctgaac cttggtcatt ttaccgatac ccacctgata gcccaagcgc
     1861 gtcgcttcat cgctgatttt ggcaacatcc gtccaatgcg aagaggcaag gcggaaacct
     1921 tttgcaggtg cttccgtttt gacggtattg ataggattca cggggatttc cgtcaatgtg
     1981 ggcacataaa tagactggca gccggaaaga actgccacaa tggaaagagg gataaggtat
     2041 tttttcatgc ccccattata atcaagtttg ccttgagaaa acaaattgtt cggcaagaaa
     2101 aataaaattt cggcatcaga agcaggcaaa aacacattcc acaagccttg ccgcaaggtt
     2161 tacaatccga ccgtccttat cgcaacgacc gtttatggat accgcaaaaa aagacatttt
     2221 aggatcgggc tggatgctgg tggcggcggc ctgctttacc attatgaacg tattgattaa
     2281 agaggcatcg gcaaaatttg ccctcggcag cggcgaattg gtcttttggc gcatgctgtt
     2341 ttcaaccgtt gcgctcgggg ctgccgccgt attgcgtcgg gacaccttcc gcacgcccca
     2401 ttggaaaaac cacttaaacc gcagtatggt cgggacgggg gcgatgctgc tgctgtttta
     2461 cgcggtaacg catctgcctt tggccaccgg cgttaccctg agttacacct cgtcgatttt
     2521 tttggcggta ttttccttcc tgattttgaa agaacggatt tccgtttaca cgcaggcggt
     2581 gctgctcctt ggttttgccg gcgtggtatt gctgcttaat ccctcgttcc gcagcggtca
     2641 ggaaacggcg gcactcgccg ggctggcggg cggcgcgatg tccggctggg cgtatttgaa
     2701 agtgcgcgaa ctgtctttgg cgggcgaacc ctgctggcgc gtcgtgtttt acctttccgt
     2761 gacaggtgtg gcgatgtcgt cggtttgggc gacgctgacc ggctggcaca ccctgtcctt
     2821 tccatcggca gtttatctgt catgcatcgg cgtgtccgcg ctgattgccc aactgtcgat
     2881 gacgcgcgcc tacaaagtcg gcgacaaatt cacggttgcc tcgctttcct atatgaccgt
     2941 cgttttttcc gccctgtctg ccgcattttt tctgggcgaa gagcttttct ggcaggaaat
     3001 actcggtatg tgcatcatca tcctcagcgg cattttgagc agcatccgcc ccactgcctt
     3061 caaacagcgg ctgcaatccc tgttccgcca aagataaaaa atgccgtccg aacatccttc
     3121 agacggcata tcgggcttta tttccccgcc ttcacatcct gccactggcg caccataaac
     3181 ttcaatgccg ccggctggat aggcaccatg ataaagctgt ttttcaaatc ctcctcggtt
     3241 gggaaaatcg tattgtcgtt tttaaattcg tcttccatca gctcacgcgc cggcttgctc
     3301 gaaggcgcat aagtaacgaa attgccgttt ttcgccgaca cttccgggtc gaggaagtcg
     3361 ttgatgtatt tgtgcgcgtt ggcgacgttt ttcgcatctt tcggaatcac gaaagaatcc
     3421 acccaaatcc ccacgccctc tttgggcatc atcacgcgga ttttttcctt gccgcccgct
     3481 tcttcggcac ggcgtttggc gatgttcaaa tcgccgccga aaccgattgt tacgcaggta
     3541 tcgccgcgcg ccaaatcatc gataaagccg gacgaagtaa agcgtttgat attggggcgg
     3601 tttttcttga gcagggcggt tgcctccctg atgtcttccg tattgctgct gttcgggttt
     3661 ttacccaaat agttcaacac cataggatag atttccgccg cgctgtctaa ataactgata
     3721 ccgcattgtt tgagtttgga cgtgtattcg gggtcgaaca ccaaatccca ctggttgtcc
     3781 ggcagcttgt ccgtacccaa agcctttttc acgcgttcgg tattgatggc gaaggtattt
     3841 gtcccccaat aaaacggcac ggcgtattcg tggccgggat cgaccccgtc catcagcctc
     3901 atcatttcgg gattgaggtg tttataattg ggaatcagcg atttatcgat tttctgatac
     3961 gcacctgcct taatctgcct gcccacaaac gcattggacg gcgcgacaat gtcgtaaccg
     4021 gattttccgg tcagcacctt gctttccagc gtttcatcgc tgtcgtacac atcataagta
     4081 accttgatgc cgtttttctt ttcaaaatcg gcaacggttt ccggatcgac gtattccgac
     4141 cagttgtaaa ttttcaatac gtttcggttt tccgccggcg ccggtttttc ggcaggcggt
     4201 ttgtccgaac cgccgcacgc tgcaagcagc aaagcagtca ggacggcgag tggcagatgt
     4261 ttggccatta tcattccttg catatcgggt tggagaaagc ggtcattata gccgatattg
     4321 gcaacagggc ttcagacggc attcaaaatc ccgccacacc cttccgaaaa ccgccgcttc
     4381 catagctaga aacagggatt tgcggtaaga taccgccgtt cgttttccct gcttttacca
     4441 tgacaagaca tttgagagac attgaaaaaa ttatgaaaac ctccgaactg cgccaaaaat
     4501 tcctaaaatt ttttgaaacc aaaggccaca ccgtcgtccg ctcttccagc ctcgtgccgc
     4561 acgacgaccc gaccctgctg tttaccaacg cgggcatgaa ccagtttaaa gacgtattct
     4621 taggtttcga caaacgcccg tacagccgcg ccaccaccgc gcaaaaatgc gtacgcgcag
     4681 gcggcaagca caacgacttg gaaaacgtcg gctacaccgc ccgccaccac accttctttg
     4741 aaatgatggg caacttctcc ttcggcgact acttcaagcg cgacgcgatc cacttcgctt
     4801 gggaatttct gacttccccc gaatggctca atatccccaa agacaaactg ttggcgaccg
     4861 tttacgcgga agacgacgaa gcctacaaca tctggttgaa cgaaatcggt atgccgtccg
     4921 agcgcatcgt ccgcatcggc gacaacaaag gcgcgaaata cgcgtccgac aacttctggc
     4981 aaatgggcga caccggccct tgcggcccct gctccgaaat tttctacgac cacggcgaag
     5041 aaatttgggg cggcattccc ggcagccccg aagaagacgg cgaccgctgg atcgaaattt
     5101 ggaactgcgt attcatgcag ttcaaccgcg acgaacaagg caatatgaat ccgctgccca
     5161 agccgtccgt cgataccggc atgggcttgg aacgcatggc cgccgttatg cagcatgttc
     5221 acagcaacta cgaaatcgac ttgttccaag acctgctcaa agccgttgcc cgcgaaaccg
     5281 gcgcagcttt cagcatggaa gaaccaagcc taaaagtcat cgccgaccac atccgctcct
     5341 gctcattcct gattgcagac ggcgtattgc cttccaacga aggccgcggc tacgtattgc
     5401 gccgcattat ccgccgcgcc gtgcgccacg gttacaaact gggtcaaagc aaaccgttct
     5461 tccacaaact ggtggccgat ttggtcaaag agatgggcga tgcctaccct gaattgaaag
     5521 aaaaacaagt tcaaatcgaa gaagcgttga aaaacgaaga aagccgtttt gcccaaactc
     5581 tggaaaccgg tatggctttg ttggaaaacg cgcttgccaa aggcagcaaa aaactcgacg
     5641 gcgaaatcat cttcaaactc tacgatacct acggtttccc atacgacttg actgccgaca
     5701 tctgccgcga acgcaatatc gaactggacg aagcaggctt cgagcgcgaa atggaagccc
     5761 aacgcgcacg cgcacgcgcc gcacaaagct tcaaagccaa cgcccaactg ccttatgacg
     5821 gtcaagacac cgagtttaaa ggttatagcg aacgccaaac cgaatccaaa gtcctcgccc
     5881 tctacaaaga cggcgagcaa gtcgacgaat tgaacgaagg cgacagcggc gcagtcgtca
     5941 tcgactttac cccgttctat gcagaatccg gcggccaagt cggcgatgtc ggctatatct
     6001 tctcaggcga aaaccgcttt gaagtacgcg atacccaaaa aatcaaagcg gccgtattcg
     6061 gtcaattcgg cgtacaaact tcaggccgtc tgaaagtcgg cgacagcgtt accgccaaag
     6121 tggacgacga aatccgcaat gccaatatgc gcaaccacag cgcaacccac ttgatgcaca
     6181 aagccctgcg cgatgtattg ggcagacacg tcgaacaaaa aggctctttg gttaccgccg
     6241 aatccacccg tttcgacatt tcccatcccc aagcggtaac tgccgaagaa atcgccgaag
     6301 tcgaacgccg cgtcaacgaa gccgttttgg cgaacgttgc cgtcaacgcc gccattatga
     6361 gcatggaaga cgcgcaaaaa accggcgcca tgatgctctt cggcgaaaaa tatggcgacg
     6421 aagtacgcgt attgcaaatg ggcggtttct ctaccgaatt gtgcggcggc acgcacgttt
     6481 cacgcaccgg cgacatcggc ctcttcaaaa tcatcagcga aggcggtatt gccgcaggcg
     6541 tgcgccgtat cgaagccatc accggcctga acgcactcaa atgggcgcaa gagcaagagc
     6601 gtttggtgaa agacatcatt gctgaaacca aagcccaaac cgaaaaagac gtactggcga
     6661 aaatccaagc aggcgcggca cacgccaaag cattggaaaa agaattggca cgcgccaaag
     6721 ccgaactcgc cgtccacgca ggcgcaaaac tcttggacga cgcaaaagac ttgggcgcag
     6781 ccaaactcgt tgccgcccaa atcgaagccg acgcagccgc cctgcgcgaa atcgtaaccg
     6841 acctgaccgg aaaatccgac aacgccgtga ttcttttagc ggcagtaaac gacggcaaag
     6901 tctccctgtg cgccggcgta tccaaagccc tgaccggcaa agtcaaagca ggcgatctgg
     6961 ttaaatttgc agccgaacaa gtcggcggca aaggaggcgg cagaccagat ttggcacagg
     7021 cagggggcac ggatgccggc aaattgcccg ccgtgttgga tagcgtgaaa gactgggtcg
     7081 gcgcgaagct ggtttgatgt gggaaaggca gcctgaaagg gattcaggct gccttttgtg
     7141 ttaaagatgc cgtctgaaag atattttcag acggcctctg tcagtttatt tggctttata
     7201 cctaccattg aatagcgatt cagaaggtat ccagccatct gccaaatcat ccaacatctt
     7261 aatccaatac tctaggcgtt tttctgtcgg gacgctttct ccccaatatt cgacaattag
     7321 agcatcatcc atttccaaag cagctttttc aatttcatgc tcaatcaatt ttaaagattt
     7381 ttctacatag tttccgccac ggtagtcttc cgccgagttg gcaacgctgc ccgcactgaa
     7441 taagtcccgc gcctgatgac aaagcacacc gcgataggta atcagataca ggacggcatt
     7501 atcgtatttg tgcttcgccc tgcctgagca gacaatacgg ggggagacta atgctgcttc
     7561 agctcggagg cggatttttt cttcctgcgg cagggaagtg taaaggcgca cttccaaagg
     7621 cagatcatgg ctgtctactg cgtcaatgtc ttctatccac cataaccgct cgccttcttt
     7681 cagcctgtta cgggcatatt ttcggatata ttccattttt tcatgcatat ccaaatcggc
     7741 aaattcagca taggaaatac cgaaaccctc aaacagagac ggtcgatcag attctatttc
     7801 tacctcaaag cgcggaacat gcgatgtgcg gacatgaatt acgctatctt cgtaaagttg
     7861 ccatttcaca tcgggaatgc cccccatttt tccgaatacc acatagatat gctgtacacc
     7921 gtcagctttg tttttctctt ggatactgtt tgctacgctg cgccaagtat cttttagcgt
     7981 gaatttgact tctacaccat attcccctat tggaacatcg gggaaaattt gcggcacagg
     8041 ttcaggattg ataactatgt cagcataagc gggaattttt gcaatgcaca gcgcacgaac
     8101 tctgttttca aaaatatctt gggatttgaa aggtgcgttt tttgcctctt gcctcaatac
     8161 ggtgcaaacc tcgtctaaaa acttctcaaa ctcctttttt gtcagcataa tgcattacca
     8221 cttaaaaata taaagtagta attttatctt atttaacagg gttatttaag tgccttacta
     8281 acggcggcgg cgatgtgcca ccctaaaaca ggagggacgg cgttgccaat ttgccgttct
     8341 gtggcacgca attttgcctg gaaaataaaa ttgtcgggaa acgattggat gcgcgccgcc
     8401 tcacgcatgg agatgcggcg gggtaattcg taatgccact gtatgtttcc atggcattct
     8461 gccctaatag tgtagcccgc cctttcggca tccaattttc gactaccttg atcggggctt
     8521 ttttctgctc tactccaaat atggttggca atttcgtctt ctactttgtc gaccaaatcg
     8581 cctatagcct gtctagctgt tacatagctg ttgctggtat ttgttttttc aatctgtatt
     8641 tcgggaattt caggtagcct tccaacgatg ataactcgct cccgagtctg tggaacaccg
     8701 taatcggctg cattcagcaa gtagtaatct acctgataac ccaaattgcg aaaatctgaa
     8761 agcactgttt ccaaatcttt ccgatgatgc ttcatcagta gccctttgac attttcagca
     8821 acaaatattt tggggcgaac gcgttcaaca gcagacaaca tggctttata cagcccgctg
     8881 cggctgcctg aaatacctgc acctttacca ttaatagaaa tatcctgaca aggaaagcca
     8941 ccgataatga tgtctgcgct agtgggtatt tcatccaaat gctgccaaat atcaccatgt
     9001 acaatgtgat ttcctaagtt gtggcggtag gttctaacag cgtgttcgtc gatttcgttc
     9061 gcccaaataa tatcaaaatc atgtttgtca taagtacggt ttaaaaactc aaagcccccc
     9121 agaaaaccca aatccattcc gccacaaccg ctaaataaag aaataatttt atattttttt
     9181 tcgcggtctt cttgcttttc ctgtttggtc attaactcca tacatttaag ataaaaagca
     9241 tgggaaaaag tacctctatt tactttgtta caaattgcat ttgccgtttc actttcccct
     9301 tgctccaaga ataattctga taattgtata aagccaattc catgctcatg cattttggct
     9361 tttatggcat ctccagctaa cttgttccaa ttttttcgtg caaattcggt catggttaat
     9421 ctttcagtca ttcataaatg acattatttt agcgtttttt ataatttaag ccaagattta
     9481 aaatctacct ttaggtttac aggccgtctg aaaacaaaaa tctcgttttc agacgacctt
     9541 tttccgctaa aatcccccta ccgtccaacc cgaaacaagg agaaccatca tgcaagttcc
     9601 tacttccgcc atcatcaacg gcgaatttgc cgacaaatac ggcaaacgcg gcagcaagcc
     9661 gtagccagca cccctgtcaa ccgcgtgcgt ggctagacca cacaccctac cactgcgggc
     9721 gacgcaaacc ttaagattga ggtgtagggt gtgtgcggta cgcacgcacg cggtttttgt
     9781 tactaccgaa tgattccaaa ccatgccgta atccagtcag cagcaaacgc tgcttgggtc
     9841 atgtaccaac aaaactcaat atcaaaggcc gtctgaagaa taattttcag acggcttctc
     9901 tctatcaaaa gcagcctgca cattcaaaaa tcgaagtgca ggctgctttt tgtgatgatt
     9961 ggaaaaaaca cacactattt gagacctttg caaaattccc caaaatcccc taaattccca
    10021 ccaagacatt taggggattt ctcatgagca ccttcttcca gcaaaccgcc caagccatga
    10081 ttgccagaca catcgaccg
//
LOCUS       DAXHKG010000068         9923 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.068, whole genome shotgun sequence.
ACCESSION   DAXHKG010000068 DAXHKG010000000
VERSION     DAXHKG010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9923
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.068"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(112..1554)
                     /gene="aldA"
                     /locus_tag="ACFMWP_001287"
     CDS             complement(112..1554)
                     /gene="aldA"
                     /locus_tag="ACFMWP_001287"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HFC5891884.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERSDELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVVAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1589..1789)
                     /locus_tag="ACFMWP_001288"
     CDS             complement(1589..1789)
                     /locus_tag="ACFMWP_001288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891885.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTGANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(1798..2187)
                     /locus_tag="ACFMWP_001289"
     CDS             complement(1798..2187)
                     /locus_tag="ACFMWP_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891886.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTVDRISVSFIREIQAA"
     gene            complement(2395..3313)
                     /locus_tag="ACFMWP_001290"
                     /pseudo
     CDS             complement(2395..3313)
                     /locus_tag="ACFMWP_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            3486..4286
                     /locus_tag="ACFMWP_001291"
     CDS             3486..4286
                     /locus_tag="ACFMWP_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC5891887.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSVMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4335..5111
                     /gene="mlaE"
                     /locus_tag="ACFMWP_001292"
     CDS             4335..5111
                     /gene="mlaE"
                     /locus_tag="ACFMWP_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HFC5891888.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5162..5656
                     /gene="mlaD"
                     /locus_tag="ACFMWP_001293"
     CDS             5162..5656
                     /gene="mlaD"
                     /locus_tag="ACFMWP_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HFC5891889.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVGFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5693..6283
                     /locus_tag="ACFMWP_001294"
     CDS             5693..6283
                     /locus_tag="ACFMWP_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HFC5891890.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6340..6618
                     /locus_tag="ACFMWP_001295"
     CDS             6340..6618
                     /locus_tag="ACFMWP_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HFC5891891.1"
                     /translation="MHTELNNGTLHISGDITVKTLTGEAFERFQQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6615..7442
                     /locus_tag="ACFMWP_001296"
     CDS             6615..7442
                     /locus_tag="ACFMWP_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HFC5891892.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7567..7929
                     /locus_tag="ACFMWP_001297"
     CDS             7567..7929
                     /locus_tag="ACFMWP_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HFC5891893.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7929..8312
                     /locus_tag="ACFMWP_001298"
     CDS             7929..8312
                     /locus_tag="ACFMWP_001298"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC5891894.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            8309..8797
                     /locus_tag="ACFMWP_001299"
     CDS             8309..8797
                     /locus_tag="ACFMWP_001299"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HFC5891895.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8879..9007)
                     /locus_tag="ACFMWP_001300"
     CDS             complement(8879..9007)
                     /locus_tag="ACFMWP_001300"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HFC5891896.1"
                     /translation="MAGVTVGRGSVVGAGAVVTKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(9013..9393)
                     /locus_tag="ACFMWP_001301"
     CDS             complement(9013..9393)
                     /locus_tag="ACFMWP_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HFC5891897.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
     gene            9403..9529
                     /locus_tag="ACFMWP_001302"
                     /pseudo
     CDS             9403..9529
                     /locus_tag="ACFMWP_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9631..9846
                     /gene="rpmE"
                     /locus_tag="ACFMWP_001303"
     CDS             9631..9846
                     /gene="rpmE"
                     /locus_tag="ACFMWP_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HFC5891898.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT         2320 a         2757 c         2487 g         2359 t
ORIGIN      
        1 gacaaaaaca tcgatgtcgg tcatgactga ttgccggtga aactgtaaaa atgccgtctg
       61 aacctgaaaa cgggttcaga cggcattttc tatcggggtt ttaaagcggc attaaatgtc
      121 ggtttccaga taaacgactt gggtttgcag atattcttcc aaaccgtgtt tgccgtccgc
      181 gccgccgatg ccggattttt tccagcccgc gtggaaaccc tgcatggctt cgaagttttc
      241 gcggttgatg taggtttcgc cgaattgcag gcggcgggta acgtagaagg cttcgtttaa
      301 attagtcgta taaacagaac tggtcagacc aaactcgcaa tcgttagcca gtgcgatgac
      361 ttggtcgagc gtgtcgaaag cggaaacggg cagcacgggg ccgaaggttt cttctttcat
      421 aatgtccata ctgttgtcgg tgtcggtcag cagggtcggc tcgaagaaat agccgcgccc
      481 ttcggcgcgt ttgccgccgc agaccagttt cgcaccttgt ttgactgccc gttccacttt
      541 ttcggcaacg gctttgacgg cgcgctcttc aatcagcgga cccatttcca gcgcgcctgc
      601 ttcggcttcg gcagggttgc cgtagcgcac gcctttcatg gcggcggtca ttttttcaat
      661 gaacgcgtct ttcaggctgc tgtggacata gacgcgctcg gcgcagttgc agatttgacc
      721 ggtgttgccg acgcgcgaag ccaagatgga tttcaccgcc aaatccaaat ccgcgtcttt
      781 caaaacgatg gcgggggctt tgccgccgag ttccaacgaa actttggtga tgttggcgga
      841 ggcggcttcc atcacttggc ggcctgcttc gacggagccg gtcaggctga ccatatcgac
      901 ttgcggatgg gcggacaagg cattgccgat ttccgcacca gggccgttca ctacgttgaa
      961 cacgcctgcg ggcagtccga ccgcatcgac gatttcggcg aagatgtggc agttgatcgg
     1021 ggttacgctg ctgggtttga cgacgatggt attgcccgtt accaaagccg ggcccatttt
     1081 gcgggcaatc aggaagaagg ggaagttcca cggcaaaatg cctgccacga cgcccagcgg
     1141 acgtttgaac aataaaatgt tttcgcgcgg gcggtcgctt tggatgattt cgccttcgta
     1201 acggcgcgcc cattcggctt ggtaatcgag ataatcggca gtgaacatga cttccacgcg
     1261 cgccaagtct ttggttttgc cgccttcggc aacgatggtg tcggtcagct cgtcggagcg
     1321 ttcgcgtatg ccttgggcga ttttgcgcaa atacgcgccg cgttcgaccg caggcagacg
     1381 ctcccaagcc ggttgcgccg cacgcgccgc cgcgacggcg cggtcaacgt ccgccttgcc
     1441 gcctttgggt tcgcgggcga tggtttcttc ggtggatggg ttcaatacgt cgcgccattc
     1501 gccgttgaaa tcgttttcaa agcgtccgtt gatgtacatg gccaattgtt tcatttcggg
     1561 ttctccagtt ttgtagtcag atgtagtttt agtttattcc caaataaatt accgtacaag
     1621 tttcttttga aatgtttaga cgagaagcta ctatgtctgc atattgttct gctaatttat
     1681 attcactcga atgcaactgc cgattattcc aatctgcatt cgcaccagta aaagccccag
     1741 cattgccgcc tgtggcataa ccaatcgcta aactgccaac ggtatccaca acaggtttca
     1801 ggctgcctga atttctctaa taaatgaaac acttattcta tcaaccgtta atgtaaccaa
     1861 acaattatca agataagagt agtttattaa atactcatct tcttcaaatt gtatattttg
     1921 tagggttaga tgattatttt ttaattctgc cgttatttca tacttgaaac tatcatctat
     1981 ttttctaaat ccaatatttg aagttgattt atccagtatg taatcattaa agatttcata
     2041 ggataattcc acttcataaa attgattttc aaatattttg aatgggcagt acgatataaa
     2101 acaatgtagt tcataaccat ttatttcaat caatactgcc tcttcaatgg tgttatctaa
     2161 ctttttgatt ttacatttat ataacattta tcttgccttt ggataaattg ttttgttttt
     2221 tggattgtta ttcaaagttc tctaaaagtc ttttcctgat tttgtatgta tcgtggtaat
     2281 actaccattt tcattggttc caacaaaaat aaatttagat tgacctttgg aatcagtacc
     2341 caaaaactga acatatccag acatgcggat ttcgggtttt aaatcaaatg cggcttatcg
     2401 gttttctttt ttggtttccg ccggcgtgct gccgaaatat tgcctgaatg cctgagtaaa
     2461 gctggaaacg tggcggtagc cgcataaaat atgcggtttc gcctatgctt ttgcccccgt
     2521 tttgcaacag gtagagcgcg tgctgcattt gtttgtggtg cagccactcg cttgcggtaa
     2581 taccgaaatg gtcgcgcata cggcgttgca gcgtcctttc actgatgttc agcgcgtctg
     2641 tcagccggtt gacttggtgt gcgccgtcgg caaacgcggc atttagggtg cggctgaagt
     2701 cttcagacgg catagcgtct gcttccgccg tttgccccgc cgccggcccg atgccgtctg
     2761 aaaccgtgtc ccacaagtcc gacagcagcc gcaacacgtc cgcctcgcgg cgcaatgttt
     2821 cgcccaaatg cccctttggg acggctttca ggcaggatgc cgccaagccg cgcaggttcg
     2881 ggggcaaatc ccatatcctg accggttcgc ggtaaagcag gggtgcgaaa cgcgcgtatt
     2941 ccggacgcag cagccattgt tccatacctt taatggtcat tttgaccgtt ttgccgcctc
     3001 ggtaaagata gcggctgaac aggacttctt ccccgacagc aattaggaca atcttgccgc
     3061 cgtccgcatc gatttggaag cggcagcggt tgatgccgaa gtccaaactg ccttccagca
     3121 agagcacgaa cgacacataa ggttcggcga ggcggctgct gcaaaaatca caccgtgccg
     3181 ttactgtgcc gccgtggatg gaaatgccgt tggacaaagt atcgaaacgg tagctgccct
     3241 ccacatagct gccgccgccg cttttgacta gattgacgaa ccggctgctg ttcaaatgtt
     3301 ctgctttttc catagttttc tgataaaggt tatcatttga aagataacat ttttcgccac
     3361 agcaaacaat ccgccgccga caacggcatt ttcacaacat ttaccgtccg tatgccgtct
     3421 gaaaattgcc cgtcttcccg ataagcctta aaatacacgc cgtcaaacct accgtccgtc
     3481 cgtacatgag cccatccccc tttatcgaaa tgaaagacgt cgccttcgcg tatggcgacc
     3541 gcccgattct gaagaacatc aatttcagca ttccgcaagg caattttgct gccgtaatgg
     3601 gcggttcggg cagcggcaaa accacgctga tgcgactgat tacaggacag attcgtccgc
     3661 agtccgggca ggttttgatt gaaggacggg atttggcggg cttttcggct gacgagttgt
     3721 atgaacaccg ccgccgtatg ggcgtattat tccaacacgg cgcgctgttt accgatttgt
     3781 cggtattcga caatatcgct tttccgatgc gcgaactgac gcgcctgccg gaagcggtga
     3841 ttcgagattt ggttttgttg aaactgaacg cggtcggttt gcgcggcgtg gaaaacctga
     3901 tgccgtccga gttgtccggc gggatgtcgc gccgcgtcgc gcttgcccgc acgattgcgc
     3961 tcgaccctga aattatgttg tacgacgaac cgtttaccgg cctcgatccg atttccttgg
     4021 gcgtgattgc ccacttgatc agccgcgtca ataaggcttt gcgttcgacc agcgttatgg
     4081 taacgcacga cattgaaaaa tctttggaaa tcgtcgatca ggtgattttc ttggcgcacg
     4141 gcgaaattat gttctccggc tcgccgcagg aaatgcgcga actggattcg ccttgggtgc
     4201 gccagtttgt cggcgggctg gcagacggcc ccgtagcata ccgttatccg gcgcaaacgt
     4261 cgttgcagca ggatttgctc gggtaaattg agccggtgcc gtctgaaacc gttgaacctt
     4321 acatatagaa atttatgaac tttatccgtt ccgtcggggc gaaaaccctc ggccttattc
     4381 aatccctcgg cagtatcacg ctgtttctgc tgaacattct ggcgaagtcc ggtacggctt
     4441 tcgtccgtcc gcgcctgagc gtgcgccaag tgtatttcgc cggcgtgctg tcggtgctga
     4501 ttgttgccgt ttcggggctg ttcgtcggta tggttttggg tttgcagggc tatacgcagt
     4561 tgtcgaaatt caaatccgcc gatattttgg gctatatggt tgcggcttcg ctgttgcgcg
     4621 aactgggtcc ggtattggcg gcgattctgt ttgccagcag cgcgggcggt gcgatgacca
     4681 gcgaaatcgg tctgatgaaa acgactgaac agctcgaagc gatgaatgtg atggcggtaa
     4741 accccgtcgc ccgcgtggtt gcgccgcgct tttgggcggg cgtgttttcc atgccgcttt
     4801 tggcttcgat tttcaacgtg gcgggtattt tcggcgcgta tttggtcggt gtaacctggc
     4861 tgggcttgga cagcggcatt ttctggtcgc aaatgcagaa caacatcacg atacattacg
     4921 atgtaatcaa cggtctgatc aaatccgccg cgttcggcgt ggcggtaacg ctgattgccg
     4981 tgcatcaggg cttccactgc gtcccgacct cggaaggcat tttgcgcgcc agcacgcgca
     5041 cggtggtttc gtccgccctg acgattttgg cggtcgattt tatattgacc gcgtggatgt
     5101 ttacagattg acagggcgtc tgaagacgaa acgcggaaca tcggatattc aaggaacttt
     5161 aatgaaaaag aacatattgg aattttgggt cggactgttc gtcctgattg gcgcggcggc
     5221 ggtcggcttt ctcgctttcc gcgtggcggg cggtgcggcg ttcggcggtt cggacaaaac
     5281 ttacgccgtt tatgccgatt tcggcgacat cggcggtttg aaggtcaatg cccccgtcaa
     5341 atccgcaggc gtattggtcg ggcgcgtcgg cgctatcgga cttgacccga aatcctatca
     5401 ggcgagggtg cgcctcgatt tggacggcaa gtatcagttc agcagcgacg tttccgcgca
     5461 aatcctgact tcgggacttt tgggcgagca gtacatcggg ctgcagcagg gcggcgacac
     5521 ggaaaacctt gctgccggcg acaccatctc cgtaaccagt tctgcaatgg ttctggaaaa
     5581 ccttatcggc aaattcatga cgagttttgc cgagaaaaat gccgacggcg gcaatgcgga
     5641 aaaagccgcc gaataaacgt atgccatcat attcaaacta ggacacttaa tcatgaaaaa
     5701 atcctccctc atcagcgcat tgggcatcgg tattttgagc atcggcatgg catttgccgc
     5761 ccctgccgac gcggtaaacc aaatccgtca aaacgccact caagtattga gcatcttaaa
     5821 aagcggtgat gccaacaccg cccgccaaaa agccgaagcc tatgcgattc cctatttcga
     5881 tttccaacgt atgaccgcat tggcggtcgg caacccttgg cgcaccgcgt ccgacgcgca
     5941 aaaacaagcg ttggccaaag aatttcaaac cctgctgatc cgcacctatt ccggcacgat
     6001 gctgaaatta aaaaacgcca acgtcaacgt caaagacaat cccatcgtca ataaaggcgg
     6061 caaagaaatc atcgtccgcg ccgaagtcgg cgtacctggg caaaaacccg tcaacatgga
     6121 cttcaccacc taccaaagcg gcggtaaata ccgtacctac aacgtcgcca tcgaaggcgc
     6181 gagcctggtt accgtgtacc gcaaccaatt cggcgaaatt atcaaagcga aaggcgtgga
     6241 cggactgatt gccgagttga aggctaaaaa cggcagcaag taatccataa gccatgccgc
     6301 cagactgaag atggcatgga ttttttccta ccgaacacta tgcatacaga actcaacaac
     6361 ggaacactgc acatcagcgg cgacatcacc gtcaaaaccc tgaccgggga ggcttttgag
     6421 cgtttccagc agcaatgccg tctgaaagaa accattgccg tcgatttcgg cggtgtcaaa
     6481 cgtgccgatt ccgcctgcgt gtcgctgctg ctcgaagtgc tgcgcggctg caaaggcagc
     6541 gtcaggctga ccggcattcc cgaatccgtg cgcgcgctgt ccgaactgta cgaaatcaaa
     6601 gactggctga aatcatgaaa aaaaccgcct atgccttcct cctgctgatc gggttcgctt
     6661 ccgcccctgc atttgccgaa acccgccccg ccgaccctta tgaaggctac aaccgcgccg
     6721 ttttcaaatt caacgaccaa gccgaccgct acattttcgc ccctgccgcg cgcggctacc
     6781 gcaaagttgc gccgaaaccc gtccgcgccg gcgtgtccaa tttttttaat aacctgtgcg
     6841 acgtggtcag cttcggcagc aatatcttgc gcttggacat caaacgcgca agcgaagacc
     6901 ttgtccgtgt cggcatcaac accactttcg gtttgggcgg gcttatcgac atcgccggcg
     6961 cgggcggcat tcccgacaat aaaaacacct tgggcgacac gtttgcttcg tggggatgga
     7021 aaaacagcaa ttatttcgtg ttgcccgtct tagggccgtc caccgtccgc gacgcgctcg
     7081 gcacgggtat tacctccgtt tattcgccca agaatatcgt cttccgcacc cctgtcggac
     7141 gctggggcac gactgccgta tccgccgtca gtacgcgcga aggcctgctc gatttgaccg
     7201 acagcctgga cgaagccgcc atcgacaaat acagctacac gcgcgacctc tatatgaaag
     7261 tccgtgcgcg gcagaccggt gcaacacctg ccgaaggtac ggaagataac atcgacatcg
     7321 acgaattggt cgaaagtgcc gaaaccggcg cggcggaaac tgccgttcaa gaagattccg
     7381 tatccgaaac acaggcagaa gcagcagggg aagccgaaac gcaacctgga acacaacctt
     7441 aaagccatgc cgtctgaaaa tccgtgttcg gacggcattc ccttctgtcg gaacggacag
     7501 tccgaaacca cagattgggc tataatctct tttttgcgca taccgcgcga cagcaaagga
     7561 aaaaccatgt acgaagtcaa ccgcagcgta ttcgtcctca tccctttaga acctttttgg
     7621 aactggctgc aaaccctgcc gggcaaccac ctcgacggac tgactcttga agacatccaa
     7681 gccgacgcca attcctacct tgtccgcccg tgcgaaaccg ccgacgaagt atgggacgaa
     7741 atcgaagccc gttttgaaga cattttcgcc gccgaacttg ccgactggtg cgaagacgaa
     7801 cgcgagtggc ctgcgctcga tgccgacatt ttcaacgaat ggttcgacat ccagctttct
     7861 accgtcatca ccgacctcga acacgaaccg cttgcccgcg aagccttcca acccatcaac
     7921 ctgaactgat gaagctgacc gtccgcaact accatctcga cggctacggc catgtcaaca
     7981 atgcgcgcta cctcgaattt ttcgaagaag cgcgctgggc gttttttgaa gaacgcggac
     8041 tgctgcacga gttggcaggc ctcatactga ttgtcgcccg catcgacatc cgatacagcc
     8101 gccccgccgt cgaaggcgac gtattgcagt tttcatgccg cctgaaaacc cccggcacgc
     8161 gccgtattgt gctgacccag acgattacac tgccaaacgg caaaaccgcc gcagaagccg
     8221 acatcaccct gatgcccgtc cacgccgcca cacaacgcac cgtcagcctg cccgccaccc
     8281 ttgcccgcgc attggaagcc ttgtccgaat gaaaaaaata ctcaccgccg ccgtcgtcgc
     8341 actgatcggc atcctccttg ccatcgtcct catccccgac agcaaaaccg cgcccgcctt
     8401 ctccctgccc gacctgcacg gaaaaaccgt ttccaacgcc gacctgcaag gcaaagtaac
     8461 cctgattaat ttttggtttc cctcctgtcc gggttgtgtg agcgaaatgc ccaaaatcat
     8521 taaaacggca aatgactata aaaacaaaaa cttccaagtc cttgccgtcg cccagcccat
     8581 cgatccgata gaaagcgtcc gccaatatgt caaagactac ggtttgccgt ttaccgtcat
     8641 gtatgatgcg gacaaagctg tcggacaggc gttcggcaca caggtttatc cgacttccgt
     8701 ccttatcggc aaaaaaggcg aaatcctcaa aacctacgtc ggcgaacccg atttcggcaa
     8761 actctaccaa gaaatcgata ccgcgctggc acaatagcga tgccgtctga aacgcaaaaa
     8821 aacagaaacg atgttcctgt tttttcagat catccgcccc gacacgttca gacggcattc
     8881 aaccttccgg cagattcttt ttcaccactg ccggattgcc tgccgccaaa gagtagggcg
     8941 gaatgtcttt tgtaaccacc gcgcctgcgc ccacgaccga accgcgtccg acggttacgc
     9001 ccgccattac aatcaccctg tgccccggcc agacatcgtc ctccaacgta atcggacgga
     9061 tttccgtgta gccctcaaag cgttttttga acggtcaaac ttgtggttat ttgaataaaa
     9121 cagacattcc ggctccatca tcacattttt gccgaccacc agcccacggc agatttcaca
     9181 gtttgccccg atgcccgagc cgtcgcccaa aaccgtatcc ggaaacacat acgccccgcg
     9241 ttcgatattg accccgcgtc cgatatgcgg agaaacccgc cgcgccaaaa aaccgcgcac
     9301 ccgtctgccg acgatgccga tgccgcgcat atgcgacggc ggcaaccccg aaccggcaaa
     9361 acgcagcagc aggaaaaaga attttgatcc catcaaacct ccctcaaaag aactttttat
     9421 agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagtacag atagtacggc
     9481 aaggcgaggc aacgctgtac tggtttttgt taatccacta tacattttat cgaatatcct
     9541 cttgacgaaa caacagaaaa tagcgagaat gtcggacttg tctgtagcat aggtacatcc
     9601 cctatgcccg cttttttgaa aggaaatcaa atgaaacaag gtattcaccc gaactaccac
     9661 gaagtcaacg ttacctgctc ttgcggcaac aaattcgcaa ccaaatccgc gatggaaaaa
     9721 gaaaacttca atatcgaggt ttgctccctg tgccacccgt tctataccgg cacccaaaaa
     9781 atcgttgata ccaccggccg cgtggacaaa ttcaacaaca aattcggcaa cctgttcaaa
     9841 cgctgattgc cgctttgcaa gaattaagcc ctgccatcat ttcgatggca gggcttttta
     9901 atatttggca cactgacttc tta
//
LOCUS       DAXHKG010000069         9917 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.069, whole genome shotgun sequence.
ACCESSION   DAXHKG010000069 DAXHKG010000000
VERSION     DAXHKG010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9917
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.069"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(100..1500)
                     /locus_tag="ACFMWP_001304"
     CDS             complement(100..1500)
                     /locus_tag="ACFMWP_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HFC5891899.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
     gene            complement(1808..3280)
                     /gene="pyk"
                     /locus_tag="ACFMWP_001305"
     CDS             complement(1808..3280)
                     /gene="pyk"
                     /locus_tag="ACFMWP_001305"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HFC5891900.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     LLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            3541..3867
                     /locus_tag="ACFMWP_001306"
                     /pseudo
     CDS             3541..3867
                     /locus_tag="ACFMWP_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4833..5069
                     /locus_tag="ACFMWP_001307"
     CDS             4833..5069
                     /locus_tag="ACFMWP_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HFC5891901.1"
                     /translation="MKELHTSELVEVSGGKFHISAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGFGVQFSKPTFGFSKKW"
     gene            6110..6247
                     /locus_tag="ACFMWP_001308"
     CDS             6110..6247
                     /locus_tag="ACFMWP_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891902.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     I"
     gene            6292..7557
                     /locus_tag="ACFMWP_001309"
     CDS             6292..7557
                     /locus_tag="ACFMWP_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFC5891903.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            7560..9647
                     /locus_tag="ACFMWP_001310"
     CDS             7560..9647
                     /locus_tag="ACFMWP_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HFC5891904.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHLSITLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAIFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
BASE COUNT         2768 a         1994 c         2217 g         2938 t
ORIGIN      
        1 ctgatttttg ttaatccact ataaatcgcg cctaaaacaa tgccgtctga aacggaaatc
       61 tgtttcagac ggcatttcta caatcaaacg gcgggccgtt tatttgaatt tgtaggtgta
      121 ttgcaggccg atgatgtcgg cgtggttttt gaaacgtgcg gaagacgcgc ctttgctgtc
      181 cacatcgttg ccgcttgcct tcgccgtgcg gtagctggtg tcgttgatgt ggatgtgggt
      241 gtaggcggca tcgacgacgt ggtttttgcc gatatggtat ttcatgccgg cggagaacca
      301 gatgcggttg ccgtcgggca ggctgttcat gcggtagtcg gcgttgcgga cgggcgattt
      361 gtcaaaagcg atgccggcgc gcagttgcag cggttcgctg atttgataag aaccgccgaa
      421 gccgactttg taggtgttgc gccagttggg ggtgatggtg gtgcggtcgg atttgccgtt
      481 gacgatggtt ttttcttttt caaaaaccag ttccgcctta tcgaagcggc tgtggcgcgt
      541 ccaagttacg tcgccgaaca ggtcggcttt atcggacact ttgtacatac cgtgtacgga
      601 caaagactca ggcgtaacga ttttaacgcg ggctttttca ttcgccgtgt agccgtttgc
      661 tgcaagcatc gtactccaca ttgctttcgc cgccgcgccg tctgccgccc attcggcatc
      721 gcctttgagc gtgtgcgaga ctttggaacg gtagttcacg cccacgcgcg cgcggtcgtt
      781 gatgtcccac atccacgcca gttggtagcc gaagccccaa tcgctgcctt tgacatcggc
      841 gtgtccgtcg gcctgaattt ttgcagcttc ggctacaccg ttaggtttgg gcggttttgc
      901 cgtcaatatc tctgctttac tcttaatccc ccagtcggca tatttgcgca gttcggcgga
      961 agtatgttgg gcgatgatgc ctgcgccgaa ggaatggcgg tcgttgagtt tccatgcggc
     1021 gacaggttcg acggcgatgc tggtcagacc gagtttgttg atgttgtggc gcaacacgga
     1081 atctttttcg tattcggtgg cagagccgaa ggggacgtac acgcccaagc ccacggtcag
     1141 attgtcgttg actttgtatg cgccgtagat gtggggcgcg accgtggttt tggtgatttt
     1201 gccgcttttc gaaccttgga cgggaagccc ggtaaagtcg gtggcggaat ccgcctcata
     1261 atgaatgctg ggcagcacga tgttggcgtt gacggaaatc tggctgctgt cgagtttggt
     1321 caggccggca gggttgtaga agatggtcga tgcgtcggcg gcttctgcgg cggcggcatt
     1381 tgccgtgctt tgcgcgttga ccgactgtgt gccgaagtgg tagccggagg cttgtgcgga
     1441 tgcggcggca aaggcagtgc cgagcagtag gacggttttt ttcagtgcgg aaggggtcat
     1501 ttcggtttcc gtaaaaaggc ggacggtgga taaatatagt ggattaacaa aaatcaggac
     1561 aaggcgacga agccgcagac agtacagata gtacggcaag gcaacgccgt actggtttaa
     1621 atttaatcca ctataaaaaa ggcagtcgga aatgccttgt ttcgctttag tataggtact
     1681 caattttatc cgatgttgcc ggatttgcac aattttttca gtttgcccga accgccgcgc
     1741 cgccgcaaaa aatgccgtct gaagcctcgg gcatcggctt cagacggcat tttccactca
     1801 gggcggatta tttgacgcgc agcacttcca gtgtgttggt cgaaccggat tcgcgcattt
     1861 gcgaaccgct ggtgatgatg tactggtcgc cggaatgcag gatgttgtgt tccaccagca
     1921 tggtttcgac ttcgttcaac gccgtgtcgt ggtcggtact ggttgccaaa atcagcgggc
     1981 gcacgccgcg gtacatcgcc atacggcgtt gggcggaaac gctcggggtc agcgcgaaaa
     2041 tcggcagggt gatgttgtgg cggctgattt caaaggcggt cgaaccgctt tcggtcaggg
     2101 cgacaatcgc tttggcgtga accgcgcgcg ccacgctgac cgcgccgccg gcaaccgcca
     2161 ggttggtgct gaccgcttcg ggatactccg cctgttcggc aacgccgttg agcgaatcct
     2221 gctctttttc cgcagccgcg cagataattg ccatttggct gacggtttca aacggatacg
     2281 cgccgacggc ggtttcggcg gaacacatca ccgcatcggt accgtccaat accgcgtttg
     2341 ccacatcgct gacttccgcg cgggtcggta cggggttggt aatcatcgat tccatcattt
     2401 gcgtcgccgt aatgctgaag cggcgcaact cgcgggcgcg gcggatcatc cgtttttgca
     2461 gggcggggac ggcggcgtgt ccgacttcga ccgccaagtc gccgcgcgca accataatgc
     2521 cgtcgccggc gaggatgatt tcgtccaagt tttcaatcgc ttctacgcgt tcgattttgg
     2581 aaaccaaacc ggggcgcacg gccgtgctgc ctttcatttc ttcttcgact ttggcgcgcg
     2641 cgatatgcaa atcttcggcg gatttcacaa agctgatggc gaggtagtcg caaccgatgg
     2701 caatcgcggt tttcaggtcg cggaagtctt tttcggtcaa cgcgcctgcg gacagaccgc
     2761 cgccgcgttt gttgatgccc ttgttgcttt tcaggacgtg gctgttttcc acccttgtga
     2821 taatcctgct gccttcgacg gattccacgg tcagggtcag caggccgtcg tccagccaca
     2881 agacatcgcc tgcggcaacg tcatcgggca ggtcgcggta gtccaaaccg accgcctcgc
     2941 gcgtgccttc gccttcaagc gcggcatcca gtagcagcgt ttcgcctttg ttcaattcga
     3001 tgccgccgcc ggcgattttg cccacgcgga ttttcggccc ttgcaggtcg gcaatgatgg
     3061 cgatttcctg tccggcgcgt tttgccgctt cgcgcacgat gcgggcgttt tcctgatgga
     3121 attcgggcgt gccgtggctg aagttgaagc ggacgacgtt caggccgccg acgcggatca
     3181 tatcttccaa cagttcgacg ttgttgctgc ccggcccaag ggtggcgacg attttggtgt
     3241 tgtggctgat gcgggtcaga tcgcggcttg tctggttcat atgaaagtcc ttttggtctc
     3301 aatcgggtgt tttgcggtat tttgttacaa aattacagaa atttggaacc ggtttgatgt
     3361 ccatttgatg aacgcggcgg aatattctgt aaaaatatga tttaaattaa tagtttgata
     3421 ttttacctgc aaaccgcctt ttttggtgca aaattacacg gttttatgac ttaggctaaa
     3481 tttatttttg ggactgtcct agataactag ggaaattcaa attaagttag aattatccct
     3541 atgagaaaaa gtcgtctaag ccggtataaa caaaataaac tcattgaact gtttgtcgca
     3601 ggtgtaactg caagaacggc agcagagtta gtaggcatta ataaaaatac cgcagcctat
     3661 tattttcatc gtttacgatt acttatttat caaaacagtc cgcatttgga aatgtttgac
     3721 ggcgaagtag aagcagatga aagttatttt ggcggacaac gcaaaggcaa acgcggtcgc
     3781 ggtgctgccg gtaaagtcgc cgtattcggt cttttgaagc gaaatggtaa ggtttatacg
     3841 gttacagtac cgaatactca aaccgcttaa aattccatgt ttgtgtactg aaatgcttca
     3901 aaacaccaaa ccaagtttcg ttttctaaaa tacgaaacca ttactgctgc ctaaattttt
     3961 ttggattgct aaattatggc agtatgattt tggattttaa attgaaaggc aagaaaaatg
     4021 tcaaaaaatg atgtagttaa agtaattggt atattccccc tattgtccga acaatagagc
     4081 agacttcccg gcaggtcaaa ttgttttaaa acacggcgaa cacaaaaagg ttaatcacgg
     4141 ctttggtgtg attcacattt tggcagaaca caaagcagat ttaacgcggt ttggattaag
     4201 ccacgatgaa acaggtgtaa cccttttatg tggaaatgat ttttcaatca ggcgcaaaaa
     4261 tttttagtga atttagtgat gtaaggggca atcatcgtcc tatgattgtc tattctcgga
     4321 ttgggacagt cgttttagaa cgcaaagaag ttgaggggga aagtgtgtat tcagttgtta
     4381 ccgcgtttgg gcgaacaagc cctcgtggta cacaaattgg tacaatgcca taaaaagaca
     4441 aaagcaccca ataatttcag gtgctttgtg tagtagccgc agcctctcct tagcttgata
     4501 gggtcggata ccaatctgac gattgagcta ctgaaattgg ttagcgacaa ccaacctgcc
     4561 cacatcagaa cgcccgttcg ctggtttgta cgtcctgaaa aagctcttgc attaagttaa
     4621 tcataatggg aaatttaaat tttttcaatg cttacttaaa caaaagcccc actccaccat
     4681 taggagtttc tttttcagta tacaagtaaa tatttttaaa atattgattt aatttaaaat
     4741 aaaatacttg caaaaaaaaa gtattaaatt aaacttgaga aaggttaatt ctgatttaca
     4801 tttccaacca tacttcttta caggagaaaa tcatgaaaga gttacacacc tctgaattag
     4861 ttgaagtgtc aggtggcaaa ttccatatct ctgcacaggg tggcggcaac ctaggtaaaa
     4921 aagatatggt tgctgttggt aaaattggtg cttcctattc ccctaacaat agtggagtag
     4981 agttttctgt tagcaagcaa tttggatatg tacaaggttt tggtgtacag ttttcgaaac
     5041 ctacttttgg ttttagtaaa aaatggtaag attttttgtt ttatcctttc tgacattaat
     5101 aaatctatgc tcattaagcg catgcaatag ccactttaca ggaaatatca atccattagg
     5161 tactcacaat aaagttgcta atcccagttg tgccaatagt gccaatagtc atatcagaca
     5221 acccagtagt aaaaactatg atccaactga atatagtgct tggttacagc atatgcatga
     5281 ttgcaaataa tgagtaacga tgaaaattta cttttttctc aaccacactt aacaaaggtg
     5341 aatattatgc aagttttgac tttgaatgaa atttaacaag tttctggtgc tgcttgtaac
     5401 tggcgtgatt tctcaaaaaa taccattggt agtgcattag gtggagcagc tggtggggca
     5461 attgttggtt catttgcagg tggtattggt gctattccag gtgcgaaatt cggagctatt
     5521 ggtggtgcaa tcactggtgc tgtacaatat ggaagcactt gttggtggta atattcctta
     5581 ataaaactag ggtattttga tattttctat tcaaaatacc ctagtttttc ataagaactt
     5641 aaatacaaaa aggaacaaat aatgaaaaaa tatagtgatt attttaaata tttaatcttt
     5701 tttttgattt tactcccaac aaattatctc gtatctcatt atgtggtaca aacctcaatg
     5761 agtatgttaa gcattttaag ttcttctata ataacaactt gccttttttt tgtttttaca
     5821 aatttatccc aatcaaagaa acataaataa gtacacatgt ctaacaatca ctcatttttc
     5881 agaccagaag tctttgtagc tcaacggaac aagtggacag gaccagtagg ctgggttggc
     5941 gcaattggag ctggtatttt ctctgctgct ggcggataca atatcggtcg tggcatgatg
     6001 aagccataag ataattacat cattaaggaa aaggtaattt cagttacagc aatatgtatt
     6061 gaagttacct ttttctattt agattgaaca attttgaaag agaaaaatta tgaatactga
     6121 aaccatttac gccactgtct tttgcatttt agctgcaacc atttctggat tattggttaa
     6181 atttaatgta attaaaatag aaacatcaat caatagcaaa tttatgttat taggcataag
     6241 tatttaatta ttggtgtttt tctatccatt ttttttaaga aataataata aatgtcccac
     6301 ttattccgaa aagaagtctt tgtagcccaa caaaataagt ggacaggtca ggttatcttg
     6361 acccgtccat tctctttttt atttctgact ttttgcgctt ttctcattgc tctgtgtatc
     6421 attatctttt tgatttttgg tagctatacc aataaaacaa ccgttgaagg tcaattactt
     6481 ccaactatgg gggtggttcg tgtttactct tccgatatcg gcacgattac gcataaattt
     6541 gttgaagatg gtaactttgt caaagctggc gaaccattgt tcaaactttc cacatcgcgt
     6601 tttggcgaaa aaggaaacgt acaagccaaa ttggcagcag aagccaacct taaaaaaact
     6661 ttggcattac aagaattgga acgtttaaag cgcattcatc aaaatgagca aaaaaatgtt
     6721 cataacaaca ttcatcgttt aaacaatcaa ttagagaata ttaaacagca aattacaggg
     6781 caaaatcgtc aaattcgttt agcggaaaaa acccttaaca agaacaagtt tttagccagt
     6841 caaggcgcag tatcccaaca agataagatg accgccgaaa gccatttatt ggaacaacgc
     6901 tcacgtttgg agagcctaaa acgtgaacaa aataatgcaa tcagggaact tgatgaacag
     6961 aaaatcacat taagcagcct gcctgaacgc cataaaaccg aattgagcca actcaaccgt
     7021 gcgattacgg aaatgaacca agaaattttg gattttgatt tgaaatccga acaaaccata
     7081 cgagctagta aatcaggtta tatttcaaca attaatgttg atatagggca acaagttgaa
     7141 ccgtctaaat tgctgttaag cattgtccct gaacaaactg aattggtcgc caatctttac
     7201 atacccagta aagctgttgg ttttattaaa ccgaaagata aagttgtttt acgttaccaa
     7261 gcgtaccctt accaaaaatt tggacatgcc acaggagaaa ttatttcagt tgccagaact
     7321 gctctcggta aacaagagct atcaggttta ggtatcattt tcactaaccc aaccttatta
     7381 aatgaacctg cctatcttgt gaaagttaaa ttggaaaaac aaacgattaa agcatacgga
     7441 gaaaacaagc cgcttcaaat tggcatgatt ttagaagcag atattctcca tgaacgaaaa
     7501 aaattgtacg aatgggtact tgacccactt tacagcattt caggaaaaat caattaaaaa
     7561 tggattattt atcaagactg tcctttggat ttaacaaaaa gctacctgtc attctgcaaa
     7621 cagaagttgc tgaatgtggt ttagcatgcc tgacatccat cttgtcctat tatggctttc
     7681 acactgattt aagaacgtta cgccaaaaat acaccctgtc attaaagggc gcaaatcttg
     7741 cagacatcat gagatttggc aatgaaatga atttaacgcc acgagctttg cgtttagagt
     7801 tagatgagct gtcaaattta caactaccct gcattctcca ttggaactta aaccattttg
     7861 ttgtactttg ttccatttcc aaagacagta tcgtcattat ggaccctgct gtcggtatgc
     7921 gaaaaatcaa aatggacgaa gtttcacaaa aattcacagg gattgcccta gaattattcc
     7981 ccaataccca ttttgaagag aaaaaagaaa caaagaaaat caaaatatta tctctattaa
     8041 gggggatttc aggcttaaaa cgctctttaa ttcaaatgct tatattagct atttctttgg
     8101 aagtctttgc attggttagt ccattcttta tgcaatgggt aatagaccat gtcattgtaa
     8161 ctgctgataa aaatttatta ctgaccctta ctttgggatt tggtttactg gctatcctgc
     8221 aacagttaat tagcctgtta caagcatggg taggtatgca cctatctata actcttaatt
     8281 tacaatggaa agccaatata tttaaaaggt tacttgactt acctaatgac tatttcagta
     8341 aacgacattt aggagatgtg atttcaagat ttggttcaat agatcatatc caagaaacac
     8401 taacttctac tttttttgtt ttagttttaa atagcttaat ggctattttt actttcgtgt
     8461 taatgacaat ttacagcact caattatcgc tgattgttct tttaacactt gttttgtaca
     8521 tactaattcg ttggcttgca tattacccat taagaaatgc aacagaagaa aatattgttc
     8581 atgaagccaa acaaaactca tatttcatgg aaaccattcg tggtatccaa tcagttaaat
     8641 tatttgataa acattatcaa agacatggca cttggatgag cctatttgtg aatacagtca
     8701 ataccaagct gacaacagat aaactctctg ctttatttga attttcaaat aaactgttgt
     8761 ttagcatgga aaatattatc ataatttatc ttggtgcaag cgcaatttta gatggttcat
     8821 ttacagtcgg tgttctgatg gcttttttgg cttataaagg gcaatttgaa agcagaacag
     8881 cttctctcgt tgaccaatac atccaaatca aaatgttagg gcttcatgct gaacgtttgg
     8941 ctgacattac tttaaatgaa acagaaactg aaattattaa gtataatcat atacctaaat
     9001 tagataatga acaactggtt cttaaagttg aaaacgtctc attcagatat gctgataatg
     9061 agccatatct ttttgaaaac attaatttgg aatttaaaga taatgaagca gttgttttaa
     9121 caggacaatc tggtcggggg aagtccactt tgttaaacat tttaacaggt agcctaaaac
     9181 ctgaaactgg tacagttagt attaatgggc atgatatata tcaagtttct ccatccttta
     9241 ttaggggatt gagcgggatt gttcgccaag atgatgtcct ttttgcaggt tctattgggg
     9301 aaaatatttc attttttgat gaaagcccaa atatggagct cattgaacaa tgtgcaaaaa
     9361 tggcacaaat acatgacgat atacttaaaa tgccaatggg ctatgagacc ttgattggcg
     9421 atatgggaaa tatcttatca ggtggacaaa agcagagagt tatcttggct cgtgcattgt
     9481 ataaacgacc caaaattcta tttttagacg aagcaagtag ccatttagat gtagaaaatg
     9541 aacaaaaaat taaccataac ctaaaaagtc ttggtattat gaaaataatg gttgcacacc
     9601 gccaagaaac aattcaatcg gcagataaaa ttctgaattt aggttgaaca gaacaagact
     9661 tcatttttct ttaacaaaaa gtgaagtctt ttttcaaata atttaataga atacatgaaa
     9721 atagcggttt aacgttccat ttcccaatca tcacgactgg ctttgtgttt tggcgatttt
     9781 tcagtttcct ttttctgttg aatttgttgt tttttctgct cttgttccca tttttgggct
     9841 aatttcacgg tctgagacct ttgcaaaatt ccccaaaatt ccctaaattc ccaccaagac
     9901 atttagggga tttctca
//
LOCUS       DAXHKG010000070         9807 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.070, whole genome shotgun sequence.
ACCESSION   DAXHKG010000070 DAXHKG010000000
VERSION     DAXHKG010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9807
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.070"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(128..1174)
                     /gene="adhP"
                     /locus_tag="ACFMWP_001311"
     CDS             complement(128..1174)
                     /gene="adhP"
                     /locus_tag="ACFMWP_001311"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HFC5891905.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDEKLAFAKESGADLVINAA
                     KEDAAKVIQEKTGGAHVAIVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAESLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1457..1846)
                     /locus_tag="ACFMWP_001312"
     CDS             complement(1457..1846)
                     /locus_tag="ACFMWP_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC5891906.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFKTYDKNKLKQNKYFNVTLSKVSPDHFTLQADPNPTTND
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2072..3250
                     /locus_tag="ACFMWP_001313"
     CDS             2072..3250
                     /locus_tag="ACFMWP_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HFC5891907.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3316..5250
                     /locus_tag="ACFMWP_001314"
     CDS             3316..5250
                     /locus_tag="ACFMWP_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HFC5891908.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5553..6353)
                     /locus_tag="ACFMWP_001315"
     CDS             complement(5553..6353)
                     /locus_tag="ACFMWP_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFC5891909.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAEPAVKAKS
                     AGKSVAASLKARLEKTYSAQDLKVLSVNETPIKGIYEVVVSGKQIIYTDAKGDYMLVG
                     DLINVNTRQSLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRL
                     EHEFEKMTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI
                     CDNPVAETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6492..8681
                     /locus_tag="ACFMWP_001316"
     CDS             6492..8681
                     /locus_tag="ACFMWP_001316"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HFC5891910.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSVRTAFVEEKPLPQSWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGGMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRPYHGQASHSEFVLNANQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLSAMSGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQSGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCSDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPVPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8728..9801)
                     /locus_tag="ACFMWP_001317"
     CDS             complement(8728..9801)
                     /locus_tag="ACFMWP_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC5891911.1"
                     /translation="MRPFCVGATVLAILGALVFFISPGVVVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPATTLMAVLLLVAAVLLPFLPQLAAFFVAAYWLVLLLFCAW
                     LIWLARNTDNFALLMLLAAFTVFQTAYAATGDLNLLRAQVHLNMAAVMFVSIRVSVLL
                     GAEALKECRLKDPVFIPNIVYKNIAITFLLLHAAAELWLPAQTAGFTALAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGGV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVPILFAAAVSRTVLMNVNPIFFITVPAILTVA
                     VFVLYLFTFVPIFQANAFTGDPE"
BASE COUNT         2309 a         2523 c         2841 g         2134 t
ORIGIN      
        1 gacgtgttgc gatacgggtt ttcagacggt atttcaaaca gaacagatta aaatcaaatc
       61 caaatccata aaaaatgccg tctgaacagc gttcagacgg catttcgatg tgtatcgcca
      121 cgtcaaatca gtggtgatga ccgcagccgc attctttttt catatcgatc accatacggc
      181 cggtgatttt gccttcgcgc atttcttgga aaatggcggg tgcttcatcc aaagcacgca
      241 gttggacttt cggcacaacc aaactttccg cgccgaattg gaaggcttct tccaaatctt
      301 tgcgcgtgcc gaccaaagag ccgaccactt cgatgccgtc caaaaccaaa cgcgggatgg
      361 acaaatccat cgattccggc ggcagtccga tggcaaccac acgtccgccc gcgcggacgc
      421 aattcacggc agagttgaat gcggcggcgg atacggcggt aacaatggct acgtgtgcac
      481 cgccggtttt ttcctgaatc actttggcgg catcttcttt ggcagcgttg atgactaaat
      541 ctgcgccgct ttctttggca aaagccagtt tttcatcgtt gatgtcgatg gcgacgacgt
      601 gtgcgccaaa tacttttttc gcgtattgga cccccaagtt gcccaaaccg cccgcgccgt
      661 agatggcaat ccactgtccc ggacgaacac tggaaacttt aatggcttta taagtggtta
      721 caccggcaca agtaatgctc gaagcttgcg caggatccaa gccttctggg actttgaccg
      781 cgtaatcggc actcacgata cagtgggtcg ccatgccgcc gtcggcagta tagccagcgt
      841 tcaatacaga gcggcacagg gtttcgcggc cggtattgca gtattcgcaa gagccgcagc
      901 tttggaacag ccaggcgatg ctgacgcggt cgccgacttt cagatttttc acaccgtcgg
      961 caacttcttt aaccaaaccg atgccctcgt gtcccagcac gcggcccggt ttttcgccgt
     1021 agtcgcctgc cgcaacgtgc aggtcggtgt ggcacacgcc gcaatattcg acttcgacca
     1081 acgcctcgcc gtattccaac gggcgaacct cgcgttcgac tatttccaca tcgcccgcta
     1141 catttttatt cacaacaact gcctgcattt tcatgattgc gctccttagt tacggcaaaa
     1201 aaacctgtaa acggaatgtt gtccgatata agggtaagca tacgcttccg catctcacag
     1261 gtcaagtggt atgttgttga aaaatataga ttatatgtta tattataaca tcttggaaag
     1321 gcacggcatc ggggcggttg ccggatgagg ggcggcaggt ttcaagtttg aaaaaccgga
     1381 cggcaaaccc gtaaaaatgc cgtctgaagc tgtgtccgga cggcatcttt acgggtttgc
     1441 gggcttcggc ggaggattag tcgaagccgg ggcaggattg gtttgtaccg gaagcggcaa
     1501 tggtaccgcc gtcgttgagc gtaacgacgc aggtttcgcc gtcgttggtg gtgggattgg
     1561 ggtcggcctg aagggtaaag tggtcggggc tgactttgct taaggtaacg ttgaaatatt
     1621 tgttttgttt cagtttgttt ttgtcgtagg ttttaaacgt ccctttttgg cggtagtaac
     1681 gttccatggt ctgcgcgttg tgcagcaggg tcgtcctgac ttccgacagg cggacgcgcc
     1741 ggatgtaggt tttataggaa gggtaggtga tgagcgtcag gatgccgagg atggcgacgg
     1801 caatcatcag ctcgagcagc gtaaagcctt tttgaacgtt tttcatagca atgtgtttcc
     1861 atttgtttgt cggtcggcga cattataacg ccgtatcgga aatggcggaa tatgtaaacg
     1921 gattgaaatt ttcgggaaag cagattgtat aagccattta aaacaaatgg ttatttttat
     1981 tgtcggcagt ttgccgcctt ggatggggca gggacttgcg gtagaatccg cttccgattt
     2041 atgggattga cgcatacaga gaattgaaaa catggcaaaa atgatgaaat gggcggctgt
     2101 tgcggcggtc gcggcggcag cggtttgggg cggatggtct tatctgaagc ccgagccgca
     2161 ggctgcttat attacggaag cggtcaggcg cggcgacatc agccggacgg tttctgcaac
     2221 aggggagatt tcgccgtcca acctggtatc ggtcggcgcg caggcatcgg ggcagattaa
     2281 gaaactttat gtcaaactcg ggcaacaggt taaaaagggc gatttgattg cggaaatcaa
     2341 ttcgacctcg cagaccaata cgctcaatac ggaaaaatcc aagttggaaa cgtatcaggc
     2401 gaagctggtg tcggcacaga ttgcattggg cagcgcggag aagaaatata agcgtcaggc
     2461 ggcgttgtgg aaggatgatg cgaccgctaa agaagatttg gaaagcgcac aggatgcgct
     2521 tgccgccgcc aaagccaatg ttgccgagct gaaggctcta atcagacaga gcaaaatttc
     2581 catcaatacc gccgagtcgg aattgggcta cacgcgcatt accgcaacga tggacggcac
     2641 ggtggtggcg attctcgtgg aagaggggca gactgtgaac gcggcgcagt ctacgccgac
     2701 gattgtccaa ttggcgaatc tggatatgat gttgaacaaa atgcagattg ccgagggcga
     2761 tattaccaag gtgaaggcgg ggcaggatat ttcgtttacg attttgtccg aaccggatac
     2821 gccgattaag gcgaagctcg acagcgtcga ccccgggctg accacgatgt cgtcgggcgg
     2881 ttacaacagc agtacggata cggcttccaa tgcggtctac tattatgccc gttcgtttgt
     2941 gccgaatccg gacggcaaac tcgccacggg gatgacgacg cagaatacgg ttgaaatcga
     3001 cggcgtgaaa aatgtgctga ttattccgtc gctgaccgtg aaaaatcgcg gcggcaaggc
     3061 gtttgtgcgc gtgttgggtg cggacggcaa ggcggcggaa cgcgaaatcc ggaccggtat
     3121 gagagacagt atgaataccg aagtaaaaag cgggttgaaa gagggggaca aagtggtcat
     3181 ctccgaaata accgccgccg agcaacagga aagcggcgaa cgcgccctag gcggcccgcc
     3241 gcgccgataa acgaatatgc cgtctgaaca cggaaacggt ttcagacggc atttgttatt
     3301 gatttacgga atattatgag cttgatcgaa tgtaaaaaca tcaaccgcta tttcggcagc
     3361 ggcgagaacc gcgtccatat tttgaaagac atcagcctgt cgatagagaa gggcgatttt
     3421 gtcgccatca tcgggcagtc cggttcgggc aagtccacgc tgatgaacat actcggttgt
     3481 ttggataccg ccggttccgg ttcgtaccga atcgacggca tcgaaactgc caaaatgcag
     3541 cctgacgaac tggcggcatt gcgccgcgaa cgcttcggct ttatcttcca acgctacaac
     3601 ctcttaagct cgctgaccgc aagggataac gtcgcgctgc cagccgtcta tatgggcgcg
     3661 ggcggcaaag agcgttccgc gcgggcggac aaactcttgc aggatttggg tttggcaagc
     3721 aaagagggca acaagcccgg cgaactctcg ggcggacagc agcagcgcgt ctccatcgcc
     3781 cgcgccctga tgaacggcgg agaaatcatc ttcgccgacg agccgaccgg cgcactcgat
     3841 accgccagcg gcaaaaacgt gatggaaatc atccacaagc tgcacgaagc cgggcatacc
     3901 gtcattatgg tcacgcacga ccccggcatc gccgccaatg ccaaccgcgt catcgaaatc
     3961 cgggacggcg aaatcatttc cgacacctcg aaaaatcccg aaatccccgc aagcaatgtc
     4021 gggaggattc gggaaaaagc ctcgtggtcg ttttattacg accagtttgt cgaagccttc
     4081 agaatgtcgg tgcaagcagt attggcgcac aaaatgcgtt cgcttctgac gatgctcggc
     4141 atcatcatcg gtatcgcttc ggttgtctcc gtcgtcgcat tgggcaacgg ttcgcagaaa
     4201 aaaatccttg aagacatcag ttcgataggg acgaacacca tcagcatctt cccggggcgc
     4261 ggcttcggcg acaggcgcag cggcaggatt aaaaccctga ccatagacga cgcaaaaatc
     4321 atcgccaaac aaagctacgt tgcttccgcc acgcccatga cttcgagcgg cggcacgctg
     4381 acctaccgca ataccgacct gaccgcttct ttgtacggcg tgggcgaaca atatttcgac
     4441 gtgcgcggac tgaagctgga aacggggcgg ctgtttgacg aaaacgatgt gaaagaagac
     4501 gcgcaggtcg tcgtcatcga ccaaaatgtc aaagacaaac tctttgcgga ctcggatccg
     4561 ttgggtaaaa ccattttgtt caggaaacgc cccttgaccg tcatcggcgt gatgaaaaaa
     4621 gacgaaaacg ctttcggcaa ttccgacgtg ctgatgcttt ggtcgcccta tacgacggtg
     4681 atgcaccaaa tcacaggcga gagccacacc aactccatca ccgtcaaaat caaagacaat
     4741 gccaataccc aggttgccga aaaagggctg accgatctgc tcaaagcgcg gcacggcacg
     4801 gaagatttct tcatgaacaa cagcgacagc atcaggcaga tagtcgaaag caccaccggt
     4861 acgatgaagc tgctgatttc ctccatcgcc ctgatttcat tggtagtcgg cggcatcggc
     4921 gtgatgaaca tcatgctggt gtccgttacc gagcgcacca aagaaatcgg catacggatg
     4981 gcaatcggcg cgcggcgcgg caatattttg cagcagtttt tgattgaggc ggtgttaatc
     5041 tgcgtcatcg gcggtttggt cggcgtgggt ttgtccgccg ccgtcagcct cgtgttcaat
     5101 cattttgtaa ccgacttccc gatggacatt tccgccatgt ccgtcatcgg cgcggtcgcc
     5161 tgttcgaccg gaatcggcat cgcgttcggc tttatgcctg ccaataaagc agccaaactc
     5221 aatccgatag acgcattggc acaggattga ggtttgaaca aagatgccgt ttgaagctgc
     5281 cggaccggtc attttggagc agaaacttat tggacaaaaa cggtttctta gattctacgt
     5341 tccagattcc cacttgcgtg ggaatgacgg cggtgtgttt cgtattgttc agtttattat
     5401 tttcaatcat tcaatgggtt aggatgtatt tgttggcttg ctgtactggt ttaaatttaa
     5461 tccactataa atttcagtgc ggattggttt tcaggcggca tttcccgcaa aaaaggcttg
     5521 gaattttcca agccttttgt tttgcggatg gattattgat ttttgcggat gatttcctcc
     5581 agttggggca tcgggctgta gccgctttgg ctgcgcccgt tggggaagac gagggtcggc
     5641 gtgccgttga agccgaattg ttcgcccaag gaagtggttt ccgcgacggg attgtcgcag
     5701 atgctgccgc cgaccgggaa tttgccttta cgcatccaat ccgtccacgc tttggcgcgg
     5761 tcgggctgac accataagat ttgcgccttg cgcgcggcat cagggtgcag gccggcaatg
     5821 ggcatcataa agctgtaaac cgtcacgtcg gtcatttttt caaactcgtg ttccaagcgt
     5881 ttgcagaacg gacaatcggg gtcggagaag acggcgactt tcagcttgcc gttgccgcgc
     5941 acttctttga tggctttgtc caaaggcagg gaagcaaagt cgattttgtt caaatcggcg
     6001 gcgcgttctt cagtcaggct ttggcgcgtg ttgacgttga tgaggtcgcc aacaagcata
     6061 tagtcgcctt tggcatcggt atagatgatt tgtttgccgc tgacgacaac ttcgtaaatg
     6121 cctttaatcg gtgtttcatt gacgctcaac actttcaaat cttgggcgga ataggttttt
     6181 tccaaacgcg ctttcaaaga ggcggcaacg gatttgccgg cggacttggc tttgacggcg
     6241 ggttcggctt tgacggcggg ttcggcgttg gcattggaaa cgggcgtttg cccgcaagcc
     6301 agcagcggga ggacggtaaa gggggtcaag attttgatta acttggtttt catataaaga
     6361 tgattgcgcg tgttggaaag gcggaattgt atcaaatctc tgttgcgcct gcattgcgcc
     6421 taggctcaat ttatcgtctg aaaatagctt ccgcctgtta aaatacgcaa aaaaatgatt
     6481 tgcctgcctg tatgatctac caccgcatcg ccgtaaacgt gccgctttca gacggccttt
     6541 tgacttattc ccattccgat ccgcttcctc caggaacgcg ggtgcttgtg cctttccgca
     6601 ataaaaccgt ggtcgggatg gtgtgggaaa cggatattgc gccggatatg gatacggcgc
     6661 ggattttgag cgttcggacg gcctttgtgg aagaaaagcc gttgcctcaa agctggcgtg
     6721 atttgttggc atttacgtcg cgttattacc actatccgac cgggcaggcg gtgtttgccg
     6781 cgctgccgca gggtttgaag gaaacgcgcg cggtggaaat gccgcagccg ccgttgtttt
     6841 atgctttgaa cgaagcgggc agggcgcaaa cgccgccgcc ggctcggttc aacaaaaaag
     6901 cggctttgtg ggatgcgctg ctgtcgggcg gaatgacgat ggcggcgttg aagcaggtga
     6961 acgcgcaggc ggcgaaatta atcgaagatt gggcggaaca gggttggatt gaaacgacgg
     7021 aagcggcgaa acctgtattg aggccgtacc acgggcaggc ttcgcactct gaatttgtgt
     7081 tgaatgccaa ccagcagaaa gcttccgatg ccattcagac ggcattggga cgcttccagc
     7141 cgtttctgct gtacggcatc accggcagcg gcaagaccga ggtgtatttt gatgcgatgg
     7201 cgaaagtgtt ggcgcagggg cggcaggtgt tgtttctgtt gcccgaaatc aacctcacgc
     7261 cgcagctttt gaagcgggtg gaaaaccgtt ttgccgacgt accgaccgcc gtgttgcaca
     7321 gccggatggc ggcaggcagg cgcacgcagg attatctgag cgcgatgtcg gggcaggcga
     7381 agctggtcat cggcacgcgg ctggcggtgt tcacgccgat ggatgatgtc gggctgattg
     7441 tggtcgatga ggaacacgac ggctcgttca aacaggacaa cgaattgcgc tatcacgccc
     7501 gcgatttggc ggtgtggcgg gcgaagcaga gcggctgccc gatcatattg ggcagtgcca
     7561 cccccagctt ggagagttgg cacaaggcgc aaagcggcgc gtaccgcctg ctgcaactga
     7621 ccgaacgcgc ccataccgcc gcgcaactgc cgcaagtgga catcctcaac gtaggccgtc
     7681 tgaaactcga caacggtttc tcgccgcaag ccttgcagct tttgaaacag aattttgaag
     7741 cgggcggcat gtcgctggtg tacctcaacc gtcgcggttt cgcgccagcg ctgttttgca
     7801 gcgactgcgg ccataccttc ggctgcccga actgctccgc caaaatggtg ctgcaccaac
     7861 gtgcccgcca actgcgctgc caccactgcg accaccgcga acccgtcccg ttcaaatgcc
     7921 ccgactgcgg caaccaagat ctgaccgccg tcggacacgg cacgcagcgc gtcgaagaaa
     7981 ccctgcgcgc cttcctgccc aaggcagccg tcgtccgtgt tgacagggac agcaccgcgc
     8041 acaaaaacga ctgggcggat ttgtaccgcc gcattgccga caacgaaatc gacattctgg
     8101 tcggcacgca gatgctcgcc aaagggcatg atttcgcgcg gctcaacctc gttatcgtgt
     8161 tgaacgccga cggcagcctg tacagcgcgg actttcgcgc cccggaaagg ctgttcgccg
     8221 agctgatgca ggtgtccggc agggcggggc gcgccgacaa acccggcaag gtgttgatac
     8281 agacccaact gcccgaacat cccgtcttcg ccgccgtcaa agcgcaggat tatgccgtgt
     8341 tcgccgaaaa cgaattgaac gagcggcaaa tgttcgcgat gccgcccttc ggtttccaga
     8401 ccgccgtccg cgccgatgcg ccgcgtgttg ccgatgcgat ggaatttctc aacgccgcca
     8461 aagaaaccct cgccccgctg ttgcccgaaa gcgtttccca gtttggcgcg gctccgatgc
     8521 tgatggtgcg ccttgccgaa cgcgaacgcg cgcaaatctt cctcgaatca acatcccgac
     8581 aagatttgca ccgagccgtg agtttgtggg tgcaggtgtt gcagcaaaac agggacggca
     8641 aaatccgatg gtcggtggat gtcgatccgc aggaggcttg attattggca atccgatgcc
     8701 gtctgaaaac cgtttcagac ggcattttta ttccggatcg cccgtaaacg catttgcctg
     8761 aaagatcggt acgaacgtaa agagataaag cacaaacacg gcgacggtca gaatcgcggg
     8821 gacggtgatg aagaatatcg ggttcacgtt cattaaaaca gtgcgcgaaa cggcagcggc
     8881 gaaaaggatg gggacggcga tgcggcagag tttggggtag tcgagcttgg taaagccgct
     8941 gtgccacagt ccggcggtca gccacaccat catcacgccg cccatcatgc ctccgagggt
     9001 aatcaggtgc aggggcgcgg aggcaggtaa gttttgcagt ttcgccgcgc ctgtccacaa
     9061 atagcctgcg gcggcaaaga gctggagcag gtaataagtg cggacgtagt gtttgcgcag
     9121 gagttcgtga tggtgcagtt cgcgcagttt ggcaagcagg ataaagccga cggcgagcgc
     9181 ggtaaaaccg gcggtttgcg cgggcagcca aagttcggcg gcggcgtgca agagcaggaa
     9241 agtaatggcg atgtttttat aaacgatatt tggaataaaa acagggtctt tcagacggca
     9301 ttctttaagg gcttccgcgc ccagcaaaac actcacacgt atggaaacaa acatcaccgc
     9361 agccatattt aaatgcactt gcgcgcgcaa caggttcaag tcgccggttg ccgcgtatgc
     9421 cgtctgaaaa acggtgaacg cggcaagcag catcagcagg gcgaagttat ccgtgttgcg
     9481 ggccagccaa atcaaccaag cgcagaacag caataaaacc agccaataag ccgctacaaa
     9541 gaatgcggca agttgcggta aaaacggcaa taaaacagcc gcaacaagca acaacaccgc
     9601 catcaaagta gtggcaggtt tcaggttgcc cgaaaaaccc gtccagtcca acaaagccgc
     9661 agtcaggaaa ccaccatatg ctgcaggcag catgagttct aagaagattt ggcggtgcag
     9721 gacgacgaca ccggggctga tgaaaaacac caacgcgccg agtatggcaa gcactgtcgc
     9781 gccgacgcaa aacgggcgca tagcaac
//
LOCUS       DAXHKG010000071         9678 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.071, whole genome shotgun sequence.
ACCESSION   DAXHKG010000071 DAXHKG010000000
VERSION     DAXHKG010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9678
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.071"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..324
                     /locus_tag="ACFMWP_001318"
     CDS             <1..324
                     /locus_tag="ACFMWP_001318"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891912.1"
                     /translation="RKQIGGRPGKPAPNASGKYAYRWKTQPHPPPGVSDGTAAAGNVR
                     RLRHRRTQNRMPAPATIRQIPLFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAG
                     YRYVS"
     gene            431..955
                     /gene="nspA"
                     /locus_tag="ACFMWP_001319"
     CDS             431..955
                     /gene="nspA"
                     /locus_tag="ACFMWP_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HFC5891913.1"
                     /translation="MKKALATLIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSIGLGVLTGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSVGVRVKF"
     gene            1091..1480
                     /locus_tag="ACFMWP_001320"
     CDS             1091..1480
                     /locus_tag="ACFMWP_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC5891914.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1558..2388
                     /locus_tag="ACFMWP_001321"
     CDS             1558..2388
                     /locus_tag="ACFMWP_001321"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HFC5891915.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRITKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLKGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2403..3860
                     /locus_tag="ACFMWP_001322"
     CDS             2403..3860
                     /locus_tag="ACFMWP_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HFC5891916.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3901..4290)
                     /locus_tag="ACFMWP_001323"
     CDS             complement(3901..4290)
                     /locus_tag="ACFMWP_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891917.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKGIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLL"
     gene            complement(4472..4873)
                     /locus_tag="ACFMWP_001324"
     CDS             complement(4472..4873)
                     /locus_tag="ACFMWP_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891918.1"
                     /translation="MKIKPLQFSNNSRRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFGF
                     FEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
     gene            complement(5290..5619)
                     /locus_tag="ACFMWP_001325"
     CDS             complement(5290..5619)
                     /locus_tag="ACFMWP_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891919.1"
                     /translation="MTDKSKTEKLISSDDKQSVIDGILDMVFNSKAYEVPWISEKLME
                     LSKNKDLDIAGLSLTCFGHLARLHSNIGDYDKVISLLHSKQDDPELQGRAEDALEDIS
                     LFLSENH"
     gene            complement(5645..6352)
                     /locus_tag="ACFMWP_001326"
     CDS             complement(5645..6352)
                     /locus_tag="ACFMWP_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC5891920.1"
                     /translation="MVKTADGYKAIARIRTGDRVFAKDEASGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNNQTLISNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITF
                     KQQPLKAYNLTVADWHTYFVKGSQAETEGVWVHNDCPYDKGNQRYKDASYHGKNDNSV
                     KSRAPTNGQAALDNSVQVKSTSPRRVGVDKANNEIVVLDKTQTFNNGFAEYHGHVRSW
                     QDLHTDQKNALKKAGLD"
     gene            complement(6488..7033)
                     /locus_tag="ACFMWP_001327"
     CDS             complement(6488..7033)
                     /locus_tag="ACFMWP_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC5891921.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFTW"
     gene            complement(7020..7172)
                     /locus_tag="ACFMWP_001328"
     CDS             complement(7020..7172)
                     /locus_tag="ACFMWP_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891922.1"
                     /translation="MDAKSLDGKIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            complement(7154..7426)
                     /locus_tag="ACFMWP_001329"
     CDS             complement(7154..7426)
                     /locus_tag="ACFMWP_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891923.1"
                     /translation="MMSVKELFKVILDENKDFPIRTIHRTPMGILPKPVALSIVQYEN
                     DPGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
     gene            complement(7659..7982)
                     /locus_tag="ACFMWP_001330"
     CDS             complement(7659..7982)
                     /locus_tag="ACFMWP_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HFC5891924.1"
                     /translation="MIVDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QIISYRQDFQISIEQNEFGEMWTCYCSVNIIPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            complement(7985..8725)
                     /locus_tag="ACFMWP_001331"
                     /pseudo
     CDS             complement(7985..8725)
                     /locus_tag="ACFMWP_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798991.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
     gene            complement(8826..9143)
                     /locus_tag="ACFMWP_001332"
     CDS             complement(8826..9143)
                     /locus_tag="ACFMWP_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891925.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEERRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            complement(9146..>9678)
                     /gene="mafB"
                     /locus_tag="ACFMWP_001333"
     CDS             complement(9146..>9678)
                     /gene="mafB"
                     /locus_tag="ACFMWP_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC5891926.1"
                     /translation="DQWMQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKAAVSGDF
                     SDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGKHISGHRNYIEGKST
                     LNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKSGLSTNFGTIHSGKN
                     GVHIVPANPKTIKKVQ"
BASE COUNT         2466 a         2517 c         1948 g         2747 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaacc gtatgcctgc acctgcaaca
      181 atccgacaga taccgctgtt ttttccaaac cgtttgcaag tttcacccat ccgccgcgtg
      241 atgccgccgc caccatttaa aggcaacgcg cgggttaacg gctttgccgt cggcaaagca
      301 gccggatacc gctacgtatc ttgaagtatt gaaaatatta cgatgcaaaa agaaaattta
      361 agtataatac agcaggattc tttaacggat tcttaacaat ttttctaact gaccataaag
      421 gaaccaaaat atgaaaaaag cacttgccac actgattgcc ctcgctctcc cggccgccgc
      481 actggcggaa ggcgcatccg gcttttacgt ccaagccgat gccgcacacg caaaagcctc
      541 aagctcttta ggttctgcca aaggcttcag cccgcgcatc tccgcaggct accgcatcaa
      601 cgacctccgc ttcgccgtcg attacacgcg ctacaaaaac tataaagccc catccaccga
      661 tttcaaactt tacagcatcg gcgcgtccgc catttacgac ttcgacaccc aatcgcccgt
      721 caaaccgtat ctcggcgcgc gcttgagcct caaccgcgcc tccgtcgact tgggcggcag
      781 cgacagcttc agccaaacct ccatcggcct cggcgtattg acgggcgtaa gctatgccgt
      841 taccccgaat gtcgatttgg atgccggcta ccgctacaac tacatcggca aagtcaacac
      901 tgtcaaaaac gtccgttccg gcgaactgtc cgtcggcgtg cgcgtcaaat tctgatatgc
      961 gccttattct gcaaaccgcc gagccttcgg cggttttgtt ttctgccacc gcaactacac
     1021 aagccggcgg ttttgtacga taatcccgaa tgctgcggct tctgccgccc tattttttga
     1081 ggaatccgaa atgtccaaaa ccatcatcca caccgacaaa gcccccgccg ccatcggcgc
     1141 gtacagccaa gccgtccgag caggcgacac cgtttacatg agcggtcaaa tccccctcga
     1201 tcccgccacg atgaccgtcg tcggcaacgg cgatttccgc gccgaagcgc gccaagtgtt
     1261 ccaaaacctg caagccgtcg ccgaagcggc aggcggcacg ctggccgaca tcgtcaaact
     1321 caacgcctac ctgaccgact tgggcaattt tgccgtcttc aacgaagtca tggcggaatt
     1381 tatcgccgag cccttccccg cccgcgccgc cgtcggcgtt gcctcgctgc ccaaaggcgt
     1441 gcaggtcgaa gccgaagccg tcctcgtttt gaacgcataa ttccacgttc ggactgcatg
     1501 atatttcaaa accatgccgt ccgaaccgca acactttccc acttcacaac atctgcaatg
     1561 gcacattacg caatcggcga catacaaggc tgtttcgacg aactgaccgc gctgctcggc
     1621 aaaatcggtt tcaaccacgg cacggacacc ctctggctga cgggcgacat cgtcaaccgc
     1681 ggcccgaaat ccctcgaaac gctgcaattc tgcatccggc acgaaaacag cgtgcaaatc
     1741 gtcctcggca accacgacct gcacctgctc gctgtcggct gcggcgaagg tgcgcccaaa
     1801 cgcagcgaca caatcgaacc catactcaaa caccccgacg gaaaaaaaat gctcgactgg
     1861 ctgcgtgcgc aaccgctgtt gatacgcgag ggcagccgcg tgatggtaca cgccggcatc
     1921 ctgccgcaat ggcgcataac caaagccgaa tcgctcgcta gagaagccga agccgaactg
     1981 cgcggcaaaa aatacgtcaa attcttctcc aaaatgtacg gcaacaaacc ggccgcgtgg
     2041 gacgaaggtt tgaaaggcta tgcccgcctg cgcttcatcg tcaacgcctt cacgcggatg
     2101 cgcgccctga cctttaaaaa cgaactggat ttcgactaca aatccacagt gaaaaaaatg
     2161 ccgccttacc tgcgcccgtg gttcaaagcc cccgaccggc aaaacctcga ccgcaccatc
     2221 atcttcggac actggtcctc gctgggctac acgaatgccg acaacgtcat ctcgctggac
     2281 accggcgcgc tgtggggcgg acagctgacc gccgtcaacc tcgaaacgga agaaattacc
     2341 caagtccaag ccgccggcgg catagactgg aaaagcttcg caaaataacg gaccgcccca
     2401 ctatgcacaa aatcctgccc atcgcccacg tcctctcccg actgggtatg ctgttttcct
     2461 ttatcctgct gatacccgcc gccctctcct acgccttttc ggacggcgcg tacaccgcct
     2521 tcgccaccac cgcgaccgtt accctttccg gctcgtgcat cgtccggctc gccaccctcc
     2581 ggttcaggcg cgaactgcgc ccgcgcgacg gctttaccct cgtcctgatg ttgtggctgg
     2641 cgtttgccgc tatggctgcg atgccgatgt acctgtattt cccgaatatg ggctttaccg
     2701 acgcattttt tgaatcgatg tcgggactga ccaccaccgg cgcgaccgtc atcccccacg
     2761 tcgacgggct cgccccctcc gtcaactttt ggcggcatat gctcaactgg ctgggcggga
     2821 tgggcatcat cgtccttgcc gtcgccatcc tgcctatgct cggcgtaggc ggcacgcagt
     2881 tattcaaagc cgaaatcccc ggcattgaca aagaaagcaa aatgtcgccg cgcatttccc
     2941 aagtggcgaa aaaactttgg ttcggctaca ccctgatcac catcctcgcg gcagcctgcc
     3001 tgcattttgc cgggatgggc tggttcgatg ccgtctgtca cgcgatggcg accctctcgc
     3061 tgggcgggtt ttccacccac gatgccagca tagcttatta caactccccc ctcatcgaag
     3121 cggtcatcat cgttttcacc attgtcggcg gcatcaattt tgccaaccat ttcgccgccc
     3181 tcaacagccg cagcctcaaa acctattgga aagacgaaga atgccggacg atgctgctgc
     3241 tgctctccgg cagcatcctt gccgccgccc tgtacctgtg gcacaccggc tattacgccg
     3301 gttttaccga atccctgcgc tacaccgcct tcaacttcgt ctccatcgga ctggcaaacg
     3361 ggctggccaa caccgacttc gcacaatggc cgctcctgat ttccctgtgg atgtttttcc
     3421 tcgccaacat cctcgccaac tccggctcga ccggcggcgg catcaaaacc atacgcgccc
     3481 tcgtcctgtt caaattcagc ctgcgcgaaa tgatggtgct gctgcacccc aaagccgtcc
     3541 gcaccgtcaa aatcagcggc aaggccatac ccgaccgcct cgcgctgacc gttatgtcct
     3601 tcatcttcat ctactttatg accgtcgtcc tcttcagctt cctgctgatg gcgagcggta
     3661 tggaatttac caccgccttc accgccgtca tcgcctgcat caccaacgcc ggccccggcc
     3721 tgggcgaagt cgggcccgcc ggcaattacg ccggtttgga cgtgatgcag aaatggatct
     3781 gcgttaccgc catgctcttg ggcaggctgg aaatcttcac cgtcttcatc ctcttcaccc
     3841 ccgcctactg gaagaaataa aaaatgccgt ctgaaaactt ttcagacggc atcttgtcct
     3901 ttaaagaagc ggaagctcta caaaaggaaa gaaatgctga aacctctgat aaatttcagg
     3961 atatttctct aaggctttta atgctttttc ttttgaaata ggcggatcat agacatctat
     4021 cccccttaag aaggcaatgc ccgttaatgc atttttttga tcatttgaaa tgtaaccata
     4081 attaacgact ccaattacat cataaatttc ccctataccc ttatcaaaat caatcaaatc
     4141 aaaaatatac aatggaattg tatcaatagg agtatctctg acaactatat ccaaccataa
     4201 tttaaattca gaaagattaa tagcatcata gaacatacag actattgcaa atcctaaatc
     4261 ttcacaattt tctttactaa ttttccacat aattatttac ctttatccat tgcttcccaa
     4321 ccgatacatc cggtatttta gcttctcctt tgccgtcaaa cactcctttg gttacctgct
     4381 ttgtgtcaaa aataccgtct gaaagccgaa tatcgtttca gacggcattt tgattgttgg
     4441 gtttttaatc agagctttgt ttgataattt gttattttga ataaaataca ggttctgtcg
     4501 agctgataac ttctattaca gaatcgctaa aaaagaaaat gtaagcctta taatatttct
     4561 tttcaaaaaa accaaaactt tcttctttca accagtccat ataactgtca tctattatct
     4621 cgaaaaaata atttatagca ggatttctat cccaatcatt tttttcttta ttttcaaata
     4681 aatattctga aaattttact ttataagatt catctgttat ttgaaaatga attatattgt
     4741 caataaatat ttcaatattt aattcataat ttcggtcgga tgccaaaatg ttcacatctt
     4801 gttcggtaac acaaattttg tctacgtaaa atctgcgact attgttagaa aattgtaatg
     4861 gtttaatctt cacaatcgtt ttccatatct aatttttgtt ttcttattgc cctgccagat
     4921 aaagcaggtc tgcctccgta ctgtctatcc tcacatttac tttcctgcca tcggctttta
     4981 tctccccggt tttaccgttt ttgccaactt tgcggctttg gcggcggcaa tgttgaaggc
     5041 ggcttcgacg gtttcggcgg cattggggtt gacccgtact catccgcaaa cggcaacacg
     5101 acggacggtg tttgcttttc agccgtctgc cgttttgacc aaggtgctgc cgtggaagga
     5161 gcaagtgtag gatttttgaa gaactcagtt ctcaatatcc tatttcaaac gaaggaaatg
     5221 ccgtctgaaa attaaacacg gtttcagacg gcattttgat tgttgggttt tcaacccgac
     5281 ctacggttcc taatgatttt cagataaaaa taaagaaata tcttctaacg catcttcagc
     5341 cctaccttga agctctggat catcttgctt tgaatgtagt aaagaaataa ctttatcgta
     5401 atcaccgata tttgaatgta gcctggcgag atgtccgaaa caggttagcg ataatccggc
     5461 aatatccaag tctttatttt tcgataattc catcaatttc tcagaaatcc acggtacttc
     5521 atatgctttg gaattaaata ccatatcaag aatgccatct ataacacttt gtttatcatc
     5581 agaagaaatc aacttttctg ttttactttt atcagtcatt ttttaatttt tccttttgaa
     5641 ttaactaatc caatcctgct ttttttaaag catttttctg atcggtatgc aaatcttgcc
     5701 aacttctgac atgcccgtga tattccgcaa aaccgttatt aaaagtttga gttttgtcta
     5761 atacaacgat ttcattattg gctttatcaa ccccaactct tcgaggagaa gttgatttaa
     5821 cttgaacgga attatcaaga gctgcttgtc cgtttgttgg tgctctactt ttcacagaat
     5881 tatcattttt gccatgataa gaagcgtctt tatatcgttg gttgccttta tcatacggac
     5941 aatcattatg aacccaaacc ccttccgttt ccgcctgact gcccttgacg aagtaggtat
     6001 gccaatcggc gacggtcaga ttgtaggctt tgagcggctg ctgtttgaag gtaatgtttt
     6061 gaaccgtctg ttttgcgccg ctttcggaaa gcagggtgtc gccttttttc agacgacctg
     6121 cctgtatcca ttttccttga ctgtaaaacg ggtggatttt attggaaatc agggtttggt
     6181 tgttgccgat gccgtctgaa atttcaatgt aaacggtttc ttgatacgga ttgccgtatc
     6241 gggcggtaac gggtttgtat cccgtttttc cgcttgcctc gtccttggcg aagacgcggt
     6301 cgccggttcg gatacgggca atggctttgt agccgtctgc cgttttgacc aaggtgctgc
     6361 cgtggaagga gcaggtgtag gatttttgaa gaacttagtt cccaatatcc tgtttaaaat
     6421 aaggggaagg tcgcctgaaa attaaacacg gtttcagacg gcactttgat taaatttaag
     6481 aaaatcctta ccaagtaaac ggtttccgat tcatatccga aaggttgcca acttcattat
     6541 ccagcaagaa ctgctcaaaa gcattccaac cctttttttc caccaattct gcttcctgtt
     6601 tatacaacgg gacaagcaaa gggaaaacga tattgtagtg ttcgccataa cagacctgaa
     6661 aatcatcgtc gaaataaaat ggggcggaaa catacagtgc atccattttg ctaccttcga
     6721 taattaccct gggtaattga ataatttcac ctcttaaaat aggttgtcta ttgtcaatca
     6781 aatattcagc cactcctgat agaaaagctg caatattttc tttattccat tcttcagaac
     6841 aggtaaaaat taattcaaac ctactcttat agttcaagtc atatcgattc aagcctaaag
     6901 tagaaaaagt agttacccct ttatatggtt gtgatgggaa gacggaaacg ctgagatgat
     6961 aacgtcgatc caagcatttt ataccgcttt cgatttcacc caaataatgt tctaaatgtt
     7021 caactataat cattttttct taaagatttc atccctatcc cggcaagacg taggctgttt
     7081 tgggctccaa taccgacttt tttattgacg gaaatgccgt ctgaaaaata aagcggcatc
     7141 ttgattttgc cgtctaagga ctttgcatcc attcctcttt gctgattcca aattcaaatt
     7201 cagcctgttc aaatgccgaa tctaatgtgt catgataagt atccgtttgt tcctgaccgg
     7261 tctcatccaa ataaaacaaa taaaatcccg ggtcattttc atattgaaca atacttaaag
     7321 caacaggttt gggaagtatc cccatcgggg tacgatgaat cgttctaata ggaaaatctt
     7381 tattttcatc taagatgact ttgaataatt cttttacact catcattctt caatcccgaa
     7441 taattgttac cgcactattt tctattacac gtccattggc tttgtagccg tctgccgttt
     7501 tgaccaaggt gctgccgtgg aaggagcagg tgtaggattt ttaaagaact tagatctcaa
     7561 tatcctgttt taaatgaagg aaaagccatc tgaaaattaa acatggtttc agacgacctt
     7621 ttgattgttg tgtttttcaa cccaacctac acttcttgtt agttcccata cgaaccaaaa
     7681 ccttcataat tacaatcatt tttttgtgca atatcaaata acgtagtttc aatagctaaa
     7741 atgttttcaa gagaagggat aatattgacg gaacaatagc aagtccacat ttctccgaat
     7801 tcattttgct caatactgat ttgaaaatct tgccgataag aaatgatttg actttctatt
     7861 gattgcagat tcttttgaga accctctata aaaaactcta ttatcatcga ttttgtcaaa
     7921 tcaaacccta gttcttgata ttgtttcagt acatctgaag tagatttttc gtcaacaatc
     7981 atttttaatc tccatcttgt tttcgatatt ttttccccgg gctttcaatt cgattgtaat
     8041 tattggtact tttggaacca ccgtgagcgt caattcttct agattcatct ttgaatgcct
     8101 ctcgattatt tttggcagga gtaaaatctg tagctatatg agggtcatta ttaaccctag
     8161 cttctcttgc tccagagatt tgggaacgtt gtcttgtgcc ctttccagaa taagttcgac
     8221 cactttcatg agtattagta taagaaccaa cttctgtcct atatttttct ccatacggac
     8281 actcattatg aacccaaacc ccttccgttt ccgccttatc acccttgacg aagtaagtat
     8341 gccagtcggc aacggtcagg ttgtaggctt tgagcggctg ctgtttgagg gtaatgtttt
     8401 gaaccgtctg ttttgcaccg ctttcggaaa gcagggtgtc gccttttttc agacgacctg
     8461 cctgtatcca ttttccttga ctgtaaaacg ggtggatttt attggaaatc agggtttggt
     8521 tgttgccgat gccgtctgaa atttcaatgt aaacggtttc ccgatacgga ttgccgtatc
     8581 gggcggtaac gggtttgtat cccgtttttc cgcttgcctc gtccttggcg aagacgcggt
     8641 cgccggcttg aatatgggca atggctttgt agccgtctgc cgttttgacc aaggtgctgc
     8701 cgtggaagga gcaggtgtag gatttttgaa gaactcagtt ctcaatatcc tatttcaaat
     8761 gaaggaaatg ccgtctgaaa attaaacacg gtttcagaag acattgtgat tgttggtttt
     8821 ttaacctacg cttgcgaaat taattccttt ctcctgaata ctgcaccatt tatttggttt
     8881 aactccatag aagaatgatt agaataaata cattcaaagt cagcttcatc aaaatattct
     8941 ccacacatag accataactc tgtaatcaaa tattccatat cttcatggtc ttctgtgatg
     9001 gcttctcttg ataaataatt tttgattttt aaaaaccttc ttctttcctc gtaatctacg
     9061 gtaattaacc tgatatctga gtgtatcatg cccagcattg ctatattcat accgactcgc
     9121 agccagcttg gtaatatatt cataactatt gcaccttttt aatggtttta gggttagccg
     9181 gaacaatgtg aactccattt ttacctgaat gaatcgtacc aaaattggta cttaatcctg
     9241 atttcccatc gctgcctata ggatacccaa aatcaacaac aggatttcct cttgctcctt
     9301 tagaaataac tggataagca cctgaatgta ttccgttcaa caattcttga ggattaatgt
     9361 tttgatttaa agtactctta ccttcaatgt agtttctatg tcctgaaata tgtttccctt
     9421 gagctccatc atgaatttta gtcccaatag attttgcttt aaaatcaaca ttgcgggttt
     9481 gaaacatttc tccatctaca gactgagata atcttgaagc agtgttatgc ttgtaggagt
     9541 ctgagaaatc cccactaacc gcagccttcc ccggttttgc cgcctttgtc aggtttttga
     9601 ctttggcaaa cggcaggacg ttgaccaggg cttcgacggt ttcggcggca ttggggtttt
     9661 cctgcatcca ctggtcaa
//
LOCUS       DAXHKG010000072         9651 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.072, whole genome shotgun sequence.
ACCESSION   DAXHKG010000072 DAXHKG010000000
VERSION     DAXHKG010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.072"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(44..3076)
                     /locus_tag="ACFMWP_001334"
     CDS             complement(44..3076)
                     /locus_tag="ACFMWP_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC5891927.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPNASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNGAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDETADIHIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPSGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSSGQYLSETEAFGHDSRAVCPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPGATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3241..3921
                     /locus_tag="ACFMWP_001335"
     CDS             3241..3921
                     /locus_tag="ACFMWP_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HFC5891928.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLACAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3950..4309
                     /locus_tag="ACFMWP_001336"
     CDS             3950..4309
                     /locus_tag="ACFMWP_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HFC5891929.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
     gene            complement(4442..4870)
                     /locus_tag="ACFMWP_001337"
     CDS             complement(4442..4870)
                     /locus_tag="ACFMWP_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891930.1"
                     /translation="MISIFKAYYDVYEFNGELLKRCIFLDEENEENNEIIKDRIYGYL
                     IYVLTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYNNEFDEE
                     DGWPDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            complement(5353..5889)
                     /locus_tag="ACFMWP_001338"
     CDS             complement(5353..5889)
                     /locus_tag="ACFMWP_001338"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HFC5891931.1"
                     /translation="MDLREVKLGGETIYEGGFVSISKDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEGKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(5923..6279)
                     /gene="folB"
                     /locus_tag="ACFMWP_001339"
     CDS             complement(5923..6279)
                     /gene="folB"
                     /locus_tag="ACFMWP_001339"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HFC5891932.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            6335..6937
                     /gene="plsY"
                     /locus_tag="ACFMWP_001340"
     CDS             6335..6937
                     /gene="plsY"
                     /locus_tag="ACFMWP_001340"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HFC5891933.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAVLTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHLSWIWATLLIALLVLFRHKSNISNLLKGKEGKIGEKR"
     gene            complement(6956..7081)
                     /locus_tag="ACFMWP_001341"
     CDS             complement(6956..7081)
                     /locus_tag="ACFMWP_001341"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891934.1"
                     /translation="MFEHIGVVAGVECVSVTEHGMKAVCAEMPSERGNMVSDGMT"
     gene            7025..7870
                     /locus_tag="ACFMWP_001342"
     CDS             7025..7870
                     /locus_tag="ACFMWP_001342"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HFC5891935.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPKLYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKELISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            8116..9090
                     /locus_tag="ACFMWP_001343"
     CDS             8116..9090
                     /locus_tag="ACFMWP_001343"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HFC5891936.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNARQDILGIRPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(9249..9467)
                     /locus_tag="ACFMWP_001344"
     CDS             complement(9249..9467)
                     /locus_tag="ACFMWP_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HFC5891937.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            complement(9443..>9651)
                     /locus_tag="ACFMWP_001345"
     CDS             complement(9443..>9651)
                     /locus_tag="ACFMWP_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891938.1"
                     /translation="GKAENLCVKRDIVNVFINRTAVLKENFAVSDKTLDKNIIFVIIN
                     VKIQFDFLTVNQERKAICSQNTVI"
BASE COUNT         2272 a         2800 c         2189 g         2390 t
ORIGIN      
        1 ccgtctgaaa cagtcttcag acggcatttc catttgcaaa aaatcaagca ttgtccaagg
       61 ggacgagaat cgtacggttg ccgttgtgtt ccggtgcgga cacaatgcct tccgcctcca
      121 tctggtcaat cagacgcgcg gcgcggttgt agccgatacg caaggcgcgc tgtacgcccg
      181 aaatgctggc tttgcgcgtt ttcaggacaa cggatacggc ctcgtcgtac atcggatcgg
      241 tttcgtcgtc gccgctgcgc ccgatgccgg gcagctcttc gctgccgccg ccgctcaaaa
      301 tatcgtcaac atagtccggt tcgccaaact gtttcaaata ttcgaccacg cggtgcacct
      361 cttcatccga ggcaaatgcg ccgtgaacgc gctgcggata ggcagtaccc ggcggcagga
      421 acagcatatc gccctgaccg agcaggtttt ccgcgcccat ttggtcgaga atcgtgcggc
      481 tgtcgatttt gctggacact tggaacgcga tacgcgtcgg gatgttcgcc ttaatcagac
      541 ccgtgatgac atcgacgctg gggcgttgtg tggcaagaat caaatggatg cctgccgcgc
      601 gggctttttg ggcgaggcgg gcaatcagtt cctcgatttt cttgcctgcc gtcatcatca
      661 aatcggcaaa ctcatcgacc acgaccacga taaacggcag tttttccaaa ggttcgggat
      721 cgtcgggcgt gaggctgaac gggttgccga ttttctcccc ccttgctgcg gcttcggcga
      781 ttttttgatt gaaacccgca agattgcgca cgcccataaa gctcatcagg cggtagcgtt
      841 tttccatttc gttaacacac cagttcagcg cgtttgccgc cagcttcata tcggtaacga
      901 caggggcgag caggtgcggg atgccttcgt aaatgctcaa ttccagcatt ttcggatcga
      961 tcataatcat acgcacgtct tccggcgcgg ctttgaaaag catagacaga atcatcgcgt
     1021 tgacacccac cgatttgccc gaaccggtcg tgccggcaac caacaaatgc ggcgcttttc
     1081 ccaagtcggt tacgacgggc tgtccggtga tgtcctgacc gagcgcgagc gtcagcttgg
     1141 atttggattc ggcaaactcg ggtgaattga agatttcgct caggcgtatc atttggcgtt
     1201 tcgggttcgg aagttccaaa cccatacagg ttttgccggg gatggtttcg acaacgcgga
     1261 tggaagccac gccgagcgaa cgcgccaagt ctttttccag attcagaacg gaattgccgc
     1321 gcacgccgac atcgggttcg atttcataac gcgtaatcac ggggccggaa taagaatcga
     1381 caaccttgac cttgactttg aactccgcca atttttcttc gatggtgatg ctgttttcca
     1441 acagttcttc ttcggtttgc gtcgccccgg gattgaacag cggcggcaga agcaggtcgg
     1501 ttgtcggcag gtgttcgtat accgcatcgg tttcttccga ttggaacgcc ccttcatccg
     1561 cttccgtatc cgatacccgg caggacgggc gttcagacgg cacatcttca aacggacaaa
     1621 ccgcccgact gtcatgcccg aacgcttcgg tttccgacag atattgcccg cttgaccgct
     1681 ctgccgcacc ctcactgccg tcatccgcaa tagcggcggt ttcctcctgc caacctccat
     1741 tcaaaacatc atcggcaaga tggtcggttt cggcaatgcg gctgcgttgc gcctgctcga
     1801 atcctgacgg cggttcatag gtacggttgt agatttccga tacgggaggc ggcggcggaa
     1861 tatcgattgc gggcatggga actttcggca cttcgggtgg ttcgaccacc caagcatcgg
     1921 gcgcggcagg ttcttcaata tggatatcgg cagtttcatc ataaaccgga ccgccgtatc
     1981 ccacagacga aacggtttcc gtgaaaacat tttcggtttc agacggcatt tcgacatccc
     2041 gtttcccgac aaccgtccga ctttccggaa tcaggcgcga aatccgcgcc tccgcagaaa
     2101 ccgttgcctt gttcggttct ttcaaattga cggaaacgcg gcggcgggca tcgcggacgg
     2161 ctgtgccgtc tgaaacggac tgtccttggg aaacatccgg ggattttgcc tccgcctgcc
     2221 ctgcatgacg gcggaacggc gcattccgtg cattttcggc tttgactgca gaaaaggcag
     2281 acggatgctg cttctcaaaa tacggctcaa atccgtaatc cgcagactcg gaaaacgctt
     2341 ctttgtccgc atcgaacata cgggaatacg tgcgttgaag cacagggtcg tccaaaccga
     2401 taatctgcag cccttccatc ggggtatcgg acacgcggac tttggggacc gctgtttcgt
     2461 ttttctcaaa tgcatcgata tagcgttttt tcgtttccct taaagccgcg ccgtttaagg
     2521 cacgcgttgc ttcttccaaa gtgatttcct taaaaaccgg acggacgggc gaaatttcgc
     2581 tttcagacgg catcaaccct tcagcaatac tccggtcgaa tgggatgcgg cggttgtcga
     2641 ttacggcagt tgcaatgtct tccgtatcgg cagcctcttc ctccgcagct tctgctgctt
     2701 ccgtttccgc ttcttccgtc ccgtttccac tgtctgaata tccgtcggat gcgttcggaa
     2761 catccgcacg gtttgcagaa gcaggcggaa caggcctatc cggttcggat tcgtgcgcca
     2821 gatagtttcg gcagaaacgg acgacaccga cgaacagcca atacactgcc gttttgacgg
     2881 catggaaaag catcagggca agttcgggaa aatcgggcat accgtctttg atttcaggca
     2941 gctccgcctg tttttcccct ttcttttcct gccacgcaga aacctcgcgc atccactcgc
     3001 gttcggattg tgcgcggaca aaaaacaggc cggcaagcgc aagcaacaaa ataacgatca
     3061 aaactatcca aaacatatgc cgtttcccgc aagacaaacg attaaacggg tttattttaa
     3121 cgtgtttcca tcccaaaaaa aacaaccagc cggcaattct gccgaaaccg attcggcttt
     3181 cggtttgccc ccgccgacag tataatagcc gtcccttccc ttaatctttg cggcattgcc
     3241 atgattttcc aaacagtctg gttttcagat gtggtactgt cggtttcgtg gattgtcctt
     3301 atcctgatac tggcagcttc cgcgccgtcc gcattccgct cgcttgcccg ctaccgttcc
     3361 gcccttccac tgtgtaccgt aattttttcc gcagcatggt gtctgaacgc ctctgccggc
     3421 ggcggacagc ttgcccagat gaactaccat ctgctcgccg tcaatctggt tgcactgatg
     3481 gtgggcactt ccgccgcctt ttggcttgcc gcgctgctga tgctgcccta ctgcctgctg
     3541 tttgccggtt ctgccggcgc atatccgccg aacgctttgg tgctgattct gcccgcgctt
     3601 gccgtcaacc gcctgtcgcg tatgctggtc aaccgcctgc cgcccaatat tttcatcttt
     3661 attttcgtca acggctttct cgcttccgcc gccggcattc tgttgaccgg gctggtgctg
     3721 accggtattt tggatgctgc aaacgctttt ccgtccgaaa tattgtggac gaccgccctg
     3781 cccgtcttta ttctgctggc gtgtgcggaa gcttttctca gcggcatttc aactgccata
     3841 tttgttgcac tgaagcccca ttggatcaac actttcgacg acaaccgcta tctgaagtcc
     3901 gaccgcggca tatggcggta gccttcagac ggcatagaca ggcaaaacca tgctttccaa
     3961 catcatcccc ctttccatcg gtgcggcact cggtgcaacg gcgcgttggc tgctcaacct
     4021 cgccgttcct gccgccatgt ctcccgccac gggcaacctg tttgccaact ggacgggcgc
     4081 gctgctcatc ggcatctttg ccgaaaccat caatcacccg caatggaagc tgctgctgat
     4141 taccggtttt ctcggcagcc tgaccacgct ttccggattt tcactggaaa ccgtaaccct
     4201 gctccaatcg aatcgtcctg cttcagcact tgccaatatt ttcctacaca cggcaggttc
     4261 gctgctgctg acttggctcg ggctgaagat aggggcggca gtcaaataac cgcaacaaat
     4321 tgcttccttt ggttttgaca caaactatac aagtcctaac atcttaatca tggcgcagca
     4381 tataagcgtg gatttgcagc ccaatctata ctttctgatt ctattcatta agccattatg
     4441 cttattcctc aatcacggtt tccaccaccg aatgaatact tttaggcaat tgcaaaaaag
     4501 cattccaagc aattaaagca gttttaaaag tatgcagcga acagcttaaa tcaggccagc
     4561 cgtcttcttc atcaaattcg ttgttataga aaactacttt ttcagcagaa atatcccagc
     4621 aaaaaccttg tccacctcct gaataaactt cattgggatt attttctgct tgatggataa
     4681 attctaaatt ttcatctatg tctttttgta gataaaggtc tcctgttaaa acataaatta
     4741 agtatccata tattctatct ttaattattt cattattttc ttcattttct tcatctaaaa
     4801 atatacatct ttttaatagt tccccattaa attcataaac atcgtaataa gctttaaaaa
     4861 tagatatcat atcatttcct tatcttccat aaatcggctt cggttgttta aataccgccc
     4921 gtgccaatta ccgttctcaa attcaaattg ggcttttagg tctataacaa agaaaaagcc
     4981 ttggtaggat aaacctacca aggctttttc ttaaaaaaac gctctattac cgtgcctaaa
     5041 aatgcaaaaa agtaaccgtc ataacccttt tgccaaaatc aatatcatca tccgatgaat
     5101 gaattgacgg tatataagaa agaattaata agctcataaa ccggtaagaa aaatcagtaa
     5161 caaagatatt cattattaac cattcttaaa aatgatcatg ttcgtttggg taattatcat
     5221 acccttttcc ctcttattac taaagcacga atgactttaa aggacgcgcc cagagacaag
     5281 ccgaaaaggc atatcccatc cgccaaacaa aatgcccgcc gacttactcc ggcgggcagc
     5341 tccaacaccc tgtcaatcct tcatcagcca gtattgcaaa ccgattaatg tcttgccgtc
     5401 tttaatttca tcgtttgcca atgcctgacg gacttcctcc ttcgacatca atacggtttc
     5461 cgtaatctcg tcttcgtcat tggcaagcgt actgcccaag cgtacgcctt ccgcctcgaa
     5521 cagatacatt ttttcgttgc aaaaaccgac cgccgtataa aaactgtaca acaggcgtac
     5581 actgtcggca acataaggcg tttcctccgc caattctcgc agcgcacacg ctgccatatc
     5641 ctcgcccgcc acatccagct tgcccgcagg aagttccaat gtcgcctgat ttgccgcata
     5701 ccgccactgc cgtaccaaaa ccactttccc ctcgtccgta accgccaaca cgcatgccgc
     5761 accgggatga cggatgacga tacgctgccc ttcgttaccg ttgggcaacc tgaccttatc
     5821 cttgctgatg ctgacgaaac cgccctcgta aatggtttcg ccgcctaatt ttacttccct
     5881 caaatccact tcatatctcc tttccgtttc ctattctgcc gttcaatctt cacgcttgcc
     5941 gcgctcgatt tccacgccaa cctcgcgcac gccttccaaa atacccggct tgacgatttt
     6001 cacgcgcacc cacaccgcgc cgaaatatcc caaaaccaaa tcggcaatat attccgccaa
     6061 cgcttccaaa agcaggaaat cctgttcttt cagatgtcgg cgcagcgttt cgcatacctc
     6121 ggcataatgc accgtattgg caatatcgtc gtccgaaccc gctttctcgg gaacgccgat
     6181 gtccaaatcg acaatcaggg tctgcaaccg ttcgcgttcc cagccgtaca cgccgataag
     6241 cgtatctgcc ttcatgccgt gcaaaaagat tttatccata atccgccccg ttttttgcta
     6301 aaataaccgc accattctaa gtaaagtacc gcaaatgttc aacataccgg ctgttgctgt
     6361 ttcctatctg atcggctcac tttctttcgc cgtcatcgtg tccaagtatt acggcatgga
     6421 cgacccgcgc acctacggat cgggcaatcc gggggcaacc aatgttttac gcagcggcaa
     6481 aaaaaaggcg gccgtgctga cgctcttggg cgatgccgcc aaaggtttgg ttgccgtttt
     6541 gcttgcacgc gtgcttcaag aaccgctcgg tttatccgac agcgcaatcg ctgccgtcgc
     6601 actcgccgcg ctggtcgggc atatgtggcc ggtgtttttc ggatttaagg gcggcaaagg
     6661 cgtggcaacg gcattgggcg tgcttttggc actctctccc gcaactgcct tggtctgcgc
     6721 gttgatttgg cttgttatgg cattcggctt caaggtgtcc tcccttgccg cattaaccgc
     6781 cacaatcgcc gccccccttg ctgcgctgtt ttttatgccc cacctttctt ggatttgggc
     6841 gacgctcctt atcgccctgc tggtgttgtt ccgccacaaa agcaatatca gcaacctgct
     6901 taaaggcaaa gaaggcaaaa tcggcgaaaa acgctgattc ggcatttgtt ttccattacg
     6961 tcatgccgtc tgaaaccata tttccgcgtt cagacggcat ttccgcacaa acggctttca
     7021 taccatgctc agttacagac acgcattcca cgccggcaac cacgccgata tgctcaaaca
     7081 cttcaccttg tttttagtgc tgcaatattt caaccgcaaa gacaagccct actggtacat
     7141 cgacacgcac ggcggcgcgg gtgtgtacaa tctcgaaggc agcgaggcac aaaaagtcgg
     7201 cgaataccgg caaggcatcg ccctacttcg acaagcaaaa aacctgccaa ccgagttaaa
     7261 cggctttatc gcgcacatac aaaaaatcct gccctcgccc aaactttact gcggttctcc
     7321 gtggctggcg caatcgctga cccgtgtcgg cgacaaattg cgcctgtttg agctgcaccc
     7381 caccgacttt gtccatctgc aaaacaatat gggcgaagca ggattgggca aacgcggaca
     7441 agtgttgcgc gaagacggtt acaaagagct gatttccctg ctgccgcccc cgccgcgccg
     7501 cgccaccgtc ctcatcgacc cgccctatga ggaaaaacag gactaccggc gtgtaacgga
     7561 aacgctgaaa gccgctttaa aacggtttga gtccggctgt tatctcattt ggtatccctg
     7621 cctcagccgc gaagaaagcc gcaagctgcc cgaagaattg aaaaaactcc tgcccgacaa
     7681 ctaccttcac gccgaacttc acgtccacgc gccgaaagcc gacggtttcg gtatgcacgg
     7741 cagcggaatg ttcgtcatca atccgcccta tctgttggcg gaacaattgg cggcaaacct
     7801 ccccgccctg acgcggctgc tggcgcaaga cgaaggcgcg cgctaccttt tggacagcaa
     7861 aatccgctga ccccgatgcc gtctgaaacc cttcagacaa catctcccgt caaataaaca
     7921 aaaccggacg atataccggc agtcggcact tttaagaata aatatcccct catccgcctg
     7981 ccgcgttccg acttgcccca tgccgttttt ttacactaca atcccctaga ctatcctgca
     8041 aaacgcacca aaggaatacg ccacaataac ctgccgcctt tcagacggca caaacctttc
     8101 cgaaacgagc aaactatgga cacactgacc cgattcctcc ccgaacacct gcaacaaaac
     8161 cagctgcccg aagcactcgg cggcgtttta ctgtccgttg tttccgcctg caccgaaatc
     8221 aacgccaaag tccgcctcgg cgcactggcc ggcgtattgg gtatggcggg cacgggcaat
     8281 attcagggcg aagaccaaaa aaaactggat gttatcgcca acaacatcat gattgacaca
     8341 ctcaaagcca accctgccgt tgccggtttg gcaagcgagg aagaagactc tttcgtaagt
     8401 gccggtgaaa acggacgcta tctcgtccta ttcgaccctt tagacggatc gtccaatatt
     8461 gatgtcaaca tttccgtcgg tacaattttc tccatccttg aaaaacccga aggcgcattg
     8521 gcaaccgaat cattccttca aacgggcaga cagcagcttg ccgctggtta cgttctttac
     8581 gggcctcaaa cccagctcgt attcacattc ggacacggcg tatatatgtt cacgctcaat
     8641 gccgaaaacg aatttgtgct gacaaaagaa aaaccgaaag tacccgaaag taccaaagaa
     8701 tttgccatca atatgtccaa ccgccgccac tggctgcccc ccgtccaaca atacatcgac
     8761 gagctcttgg cgggcgaaac cggcacgcgc ggcaaaaact acaatatgcg ctgggtagcc
     8821 agcatggttg ccgaaatcca ccgcatactg atgcgcgggg gcgtgttcat gtatccgcaa
     8881 gacaaacgcg acccgtccaa acccggcaaa ctgcgcctga tgtatgaagc caatcctatg
     8941 gccctgatac tcgaacaagc cggcgcatcg gcaagcaacg cccgtcagga catactcggc
     9001 atccgtcccg aaagcctgca ccagcgcgtc gccgtcatta tgggcagcag cgaagaagtg
     9061 gattacctca accgcctgca ttcaaaataa aaggcagcct gaccgataaa gaaaggcggc
     9121 agcgcgcatc cgacgctgcc gccgatattt cgtttatagc cttaaaaaga tagaaaacca
     9181 cctttccgaa cggcaaaaat gccgtctgaa aagttttcag acggcatttt aaaaattaaa
     9241 gcccgaattt atttgcccgc tgctttttgc aggatggcgt acaactcgtc tttcagtttc
     9301 aatttggctt ttttcagctc atcgatggtt tccgcaccgc tggtaaccgg attgttgacc
     9361 agaccggtaa ttttatcgtc cagctcgttg tgttcgtcga acagacgggc gaagcgggaa
     9421 ttttcctgtt tcaatttgga aatcaaatca cggtattctg ggaacatatc gctttcctct
     9481 cttggtttac ggttaaaaag tcaaactgaa tctttacatt aattataaca aagataatat
     9541 ttttatccag tgttttatcg gatacggcaa aattttcttt taacaccgcc gtccggttga
     9601 taaaaacgtt gacaatatca cgctttacgc ataaattttc agcctttcct a
//
LOCUS       DAXHKG010000073         9650 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.073, whole genome shotgun sequence.
ACCESSION   DAXHKG010000073 DAXHKG010000000
VERSION     DAXHKG010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.073"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(1..1183)
                     /locus_tag="ACFMWP_001346"
                     /pseudo
     CDS             complement(1..1183)
                     /locus_tag="ACFMWP_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1329..2033
                     /locus_tag="ACFMWP_001347"
     CDS             1329..2033
                     /locus_tag="ACFMWP_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HFC5891939.1"
                     /translation="MLRSILAASLLAVSFPTAAEALNYNIVEFSESAGVEAVQDTMSA
                     RFQVTAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAA
                     PGVEEISISVNGTVQF"
     gene            complement(2097..2663)
                     /gene="dcd"
                     /locus_tag="ACFMWP_001348"
     CDS             complement(2097..2663)
                     /gene="dcd"
                     /locus_tag="ACFMWP_001348"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HFC5891940.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2729..3145)
                     /locus_tag="ACFMWP_001349"
     CDS             complement(2729..3145)
                     /locus_tag="ACFMWP_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MORN repeat-containing protein"
                     /protein_id="HFC5891941.1"
                     /translation="MLKHLAFLLPAMMFALPAASAVLTSYQEPGCTYEGDVGKDGKPA
                     GKGTWRCQDGRNYTGSFKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            complement(3197..4096)
                     /locus_tag="ACFMWP_001350"
     CDS             complement(3197..4096)
                     /locus_tag="ACFMWP_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HFC5891942.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSIMLEELVSYLGGWQD"
     gene            complement(4127..5584)
                     /gene="der"
                     /locus_tag="ACFMWP_001351"
     CDS             complement(4127..5584)
                     /gene="der"
                     /locus_tag="ACFMWP_001351"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HFC5891943.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5738..6367)
                     /locus_tag="ACFMWP_001352"
     CDS             complement(5738..6367)
                     /locus_tag="ACFMWP_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HFC5891944.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RATSQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISTAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6368..7663)
                     /gene="hisS"
                     /locus_tag="ACFMWP_001353"
     CDS             complement(6368..7663)
                     /gene="hisS"
                     /locus_tag="ACFMWP_001353"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HFC5891945.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAADLTNTLQQWKNA"
     gene            complement(7789..8445)
                     /locus_tag="ACFMWP_001354"
     CDS             complement(7789..8445)
                     /locus_tag="ACFMWP_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC5891946.1"
                     /translation="MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSM
                     SRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVRQIRQARAE
                     "
     gene            complement(8503..8693)
                     /locus_tag="ACFMWP_001355"
                     /pseudo
     CDS             complement(8503..8693)
                     /locus_tag="ACFMWP_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(9448..>9650)
                     /locus_tag="ACFMWP_001356"
     CDS             complement(9448..>9650)
                     /locus_tag="ACFMWP_001356"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891947.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
BASE COUNT         2265 a         2320 c         2456 g         2609 t
ORIGIN      
        1 cgtattttct taccgtattc tgcgattgcc tgtcggaaaa tgccgatcaa cctgcctata
       61 acggcatttt cgccaaattc gttcagacag ttttccctaa gtcgggcagg ttcaaaatca
      121 gagtggtgtt catacatttt gatgagtgcg tcggcaaggg catcgtcgtc gtcaacagga
      181 accaaatatc cgttgccgtc tgaaacaata gattccgcac cgccgcagcg tgttgcaatg
      241 acgggcaatc cttgggacag tgcttcgata tagactacgc cgaaggtttc ggtgcggctg
      301 gcaaggacga atgcgtcgct gttcctcatc aaatccaaga ctgcttcggg ctgcaatgcg
      361 cccaaaaatg taacggcatg ggtaatgccc aagtctgccg cctgctgttt cagccgctgt
      421 tcttcctgtc cgctgccgcc gatgttcagg cgcagttgcg ggcattgtgc caacgcccgg
      481 gcaaaggcag tgagtaggac atcgtgtcct ttgagacggc gaaggtgcga gacggtgcag
      541 aacacgaaat gcggtttgtt gtttttttct ctttgttcaa acggtcggtt gaatattccg
      601 cccagtatgt tgggggaggt actgccattc gcagccgtat ttgtgttgca ggacgtgtgc
      661 gaaatggcgg ctgacagcga gcagtgcgga ggcgtgcgcc gctgcttttt ccatcggctg
      721 ccattggtgg ggacggatca gaccgcgcgt gatggtgctg ctgtgttccg tgacgacata
      781 ggggatgccg tatttttggg aaattttttg ggcgagtatg ccggcatagt tcatgcggtg
      841 ggcgtgaatc aggtcgggca gcccgttttc gcggatgtag tgtttgaaag ctttcaaacc
      901 cgcacacacc cagcggatgc agtcgatgtc gatgaacgga aagcggggga agaaatatat
      961 gccgtgccat gcatagatgt ccaaaccgct ttgccgatat tttgcaaaac cgtaaggccg
     1021 gtcaggatgc ttgctgtttc tttccgcaag tagcggaaca tcggtgcaag cacggcggtt
     1081 ttgatgcctt tcctctgcaa tgccagtgcc tgattttgaa aaaaatcccg tccacatcct
     1141 gttcggattg cggataccat gaggggatga cgaggacgtg caagggttcg ggcatagtgg
     1201 gattccgtat cggaaaggcg gttattataa gacagacgca gaccgaatat ttaaattgtt
     1261 gccttacgct aatgcaattt agcgcgccga tatgctagat tggcggtttt ataagtaagg
     1321 atacggatat gttgcgttct attttggcgg cttccctgct ggcggtatct tttccgacgg
     1381 cggctgaagc attgaattac aatattgtcg aattttctga atcggcgggt gtcgaggcgg
     1441 ttcaggatac aatgtccgca cgtttccaag tgacggcgga aggacgggac aaaaatgccg
     1501 tcaatgccga gtttgttaaa aaattcaaca atttcaccag aaaatcaaaa aatggtagct
     1561 ttaaaaccga attggtatcg cgcagtgcga tgccgcgcta tcaatatacc aacggcagac
     1621 gcattcaaac aggttgggag gagcgtgcgg aatttaaggt cgagggtagg gattttgatg
     1681 cgttgaaccg ttttattgcc gatgttcagg cagatgccgc gttggaatat acggatttcc
     1741 atgtgtcgcg cgaacgccgc aacgaggtca tcgatcaggt cagcaaggat gccgttttgc
     1801 gtttcaaggc gcgtgccgaa aagttggcgg gcgttttggg tgcgtccggt tataaaatcg
     1861 tcaaattaaa tttgggacac atcggcagcc atatcgcggg agggggagct gctcaggcaa
     1921 aaatgcttcg tgccatgccg atggcggcaa gcgtcaatat ggagggtgcg gattccgccg
     1981 cgcctggtgt ggaggaaatc agcatcagcg tcaatgggac ggttcagttc tgatttgagg
     2041 tgaacggcaa atgccgtctg aaacccgacg ataagggttc agacggcatt tatatttcag
     2101 gctttgggca gggtaacgcc ggtttgcccc atatatttgc cgttgcggtc tttgtatgag
     2161 gtttcgcaga tttcgtcgct ctcgaagaag aggacttgcg ccacaccttc gcctgcgtag
     2221 attttggcgg gcaggggggt ggtgttggaa aattcgaggg taacgtagcc ttcccattcc
     2281 ggttcgaacg gggtaacgtt gacgataatg ccgcagcggg cgtaggtgga tttgcccaag
     2341 cagacggtca ggacgttgcg cgggatgcgg aaatattcga ccgtgcgcgc cagtgcgaag
     2401 gaattgggcg ggatgatgca gcagtcgtct tcaacggtaa cgaagttttt cgggtcgaag
     2461 tttttgggat cgacgatggt gctgttgatg ttggtgaaga ttttaaattc gtttgcgcag
     2521 cggatgtcgt agccgtagct ggacgtaccg taggagatga tgcgtttgcc gtcggcttct
     2581 ttgatttggt tcggctcgaa agggtcgatc atgccgaatt cttcgctcat tcggcgtatc
     2641 catttgtcgg acttgatgct cataatgttt tccttgtttc ttgcagtgtt cggacaaagc
     2701 attgggggat gccgtctgaa aacggggctt atttgttttt gggcagcttc acttctttaa
     2761 tcatgccgtt ttcgcatttc ataatgaaga gggtttcgcc gttttgcgag acggtaaatc
     2821 tgccgtgtgc caagcctttt ttgaatgtgc ccgagagtac catgttgcgg aatttggtac
     2881 tgtcggaatt gaacggttcg ataaatattt cgcggttggc ggcaacggta taaacgcctt
     2941 gtccgtcgaa tttgccattt ttaaacgaac cggtatagtt gcgcccgtct tggcagcgcc
     3001 atgtgccttt gccggcgggt ttaccgtctt tgccgacatc gccttcgtag gtgcagccgg
     3061 gttcttgata ggaagtcaga acggcggacg cggcggggag ggcgaacatc atggcgggca
     3121 gtaggaatgc gagatgttta agcataaggg ttattccatt ggattttggc tgacggtata
     3181 aaagccgtct gaaaaatcaa tcttgccagc cgcccaaata ggaaaccagc tcttccaaca
     3241 tgatgctgac ggattccgcc atcaggattt gcgaggcgaa ggcgagaccg gcggcatcgt
     3301 cgccgttgct ttcggcttct tcctgcaata cgtcgaggta ttggatgcgc ttgagtgtga
     3361 agtcttgagt gaggataaag gcgatttgtt cgcgccaaac caaaccgagc tgggttacgg
     3421 ttttaccgtt tttgacgtgt tgaaccactt cgtcggcggt taaatcttgt ttggatactt
     3481 tgacgacggg aacaatatcg cccgtgcctt tgagttcgca atcgctgtcc aattcaaaac
     3541 cgccttcgca atgcccttgc aacagccagc cggtcatcaa ggaagagggc gattgcttgg
     3601 tattcggcag cgaggcttcc aaaccgccca aagcttcgcg cagcttggtc aggatgtttt
     3661 ctgctttggc ggaagccgcg ttattgacga gcaggtagcc gtggcgggtg ttaaacaccg
     3721 cttctgtacg gctgctgcgg gtaaacgctc ggggcagcag gtcgtctgta atttgctctt
     3781 taagctcttg tttttcttta cggccgacat tgcgggcttc attgttttgg atttccgcta
     3841 ccttctcttc caaaatatcg cggatgacgc cggcaggcag gactttttct tcttttttca
     3901 gggcgacgcg caaggtaaag tcggcaggga aaacgagttc aggggagaat gaaaccggtg
     3961 cggtaaagcc ttcgctgaac cagtctaagc cttggcaatg ggtaaattca gcttcagcaa
     4021 gtttgtcggc aagtacgtct gcctcaggca gcttttcttt gttgagcgga taaaaactaa
     4081 tctgcttgaa ccacataatg tttcctattg tttgaaatgt cgggaattat ttgctgaatt
     4141 gttttttcac actgactttg gttttcttct tgaagcggtt tttctcttct ttgcggcctt
     4201 cgcgtttctc aatacggttg ctcaggctga cgcggcgcag cggttttttc ttcggtttgt
     4261 cttccgcatt ttcatacggg ttttccgaaa cattgtattg aatccgcaac ggcgtgcctt
     4321 gcaggttgaa ggctttgcgg aacgtttggg tcagatagcg cgtatagctg tcggaaatcg
     4381 cgtgcagcga attgccgtgt accacaatta cgggagggtt catgccgcct tggtgggcat
     4441 aacgcatttt cggacgcacc aagccggcac gcggcggttg ctgacgctcg atcgcgcttt
     4501 gtaatacgcg cgtgattttc ggcgtcggca tcttaatcat cgccgcgttg taggcagcct
     4561 gaatgctgtc aaacaaaccg tctataccgc gctctttcaa tgcggaaata aagtggaact
     4621 tggcaaaatc gaggaaatac agtttgcggt tgatatcgcg tttcacttgc tcgcgacgct
     4681 cttcgctgat gccgtcccat ttgttgacgg caaccaccaa ggcgcggcct gcttccaaag
     4741 caaaaccggc aatcgtcgca tcttggtcgg cgatgtcctg ctgcgcgtcc aataccaaaa
     4801 cagcgacgtt tgccgcttca accgcctgca tcgctttgat aacggagaat ttttctactg
     4861 cttcatccac tttgccgcga cggcgcacgc ctgcggtatc gatgatggta aacggtttgc
     4921 cttcgcgttc gaaatcgatg tggatgctgt cgcgtgtcgt gcctgccata tcgaaagcaa
     4981 tcacgcgctc ttcgccgagg atggcgttaa ccagtgtgga tttgccgacg ttcggacggc
     5041 cgatgacggc aaagacggga tgttttgcat cggcttcttc ggcttccggc tctgggaagg
     5101 tttccaaaat atcttcaatc agataataca cgccatcgcc gtgcgcacct gaaataacat
     5161 aagggtcgcc caaagcaagt tcgtagaact cggcggcaag cacggccctg ttgccgcctt
     5221 cgcctttgtt taccgccaga taaacagggc gcgggctttg gcgcaggcgg tcggcaatga
     5281 ttttgtcttg cggggtcagg ccggtacggc cgtccaccaa aaacacaacc gcatcagctt
     5341 catcgacagc ctgcaaggtt tgttttgcca tttcgtgcaa aatgccgctg tccacaaccg
     5401 gctcgaaacc tccggtatcg atgaccaaat aaggtttgct gccgactttg ccgtgtccgt
     5461 aatggcggtc gcgggtcagg ccgggcaggt cgtgtacgag tgcgtctttg gtgcgcgtca
     5521 aacggttgaa taaagtagat ttgccgacgt tagggcggcc gacaagcgcg atggtgggtt
     5581 tcattattgg gtctttctgt gtcaagtgcc gttcgggaga actgaacacg agcaggtgtc
     5641 cgttggacac ggtaaatagg ttcttcacgg caagaggcca taaagaggga gggtaaaatg
     5701 ccgtctgata aataatggac agcatttcag acggcattta tttcagcgaa tcaagtttca
     5761 tttgaaccaa ttcgcgaccg acagaatctt gaggcatttt ttctaaagcc tgtccgtagt
     5821 tttttaaggc ttcctggctt tttccctgtg cggcatagac atcgcctttg gtttccatca
     5881 gcaggggggc gaagtccgct tcaaccggcg tatcgagcgc ggcaagcgcg gcatcgtatt
     5941 ttttttgttg caacaacaca acgcccagac gctgcgccgc caacgcttga atcaggctgt
     6001 ctttttggtt ggacaacacc catttcaaat ggccttcggc aacatcgtaa cgctgtgcgt
     6061 caaattcggt tgccgccgcc atcagcgtgg cttgggcggt ggaaatggaa tgcgggtagc
     6121 tttgctggag tttggtcaat tcggcattga tttcgctttg cggggctttg ttttgcgcct
     6181 tttccacgat gtttgccagc accgccgccg cttcctgatt ttgggaagtc gcacggtttt
     6241 ggtaaaccgt gtatcccaag tagccgagcg ccgccaaaat cagcagggca aacagccatt
     6301 tgcccgtggt tttccaaaaa tatttaaagt tgtccaactc ttgttgttct tccaaatggg
     6361 ctgccattta tgcgttcttc cattgttgta aagtgtttgt caaatcagcg gcggcgacag
     6421 tttgctgacc gtgtgcgccg ttcatgtctt tgagcgtaac cgtaccgttc gccagttcgt
     6481 cttgcgccac aatcagggca aagcgcgcgc cgctgttgtc ggcttttttc atttgtgctt
     6541 tcaggctttg atagccggaa tgctgcatta cattgaaacc ttgcgcgcgc aaggcttgcg
     6601 cgtatttcat cacctgcaag tccgcccttt cgccttggtg cattgcatag acatcaggcg
     6661 cagcgttcac ttccagcgag ccgtattcgc tcaccaaaag cagcagccgt tcgatgccca
     6721 tcgcaaagcc gatggacggc gcaggtttgc cgccaagttc ctcaatcaaa ccatcgtaac
     6781 ggccgccgcc gcacacagtt gcctgcgcgc cgagtttgtc ggtcgtccac tcaaaaaccg
     6841 tctgattgta ataatccaaa ccgcgaacca agcgcggatt ttcaatatat tggataccca
     6901 aaccgtccaa catcgccttg aagcgtgcat agtggttttg cgaagcctcg cccaaataat
     6961 ccaccaaacg cggcgcggcg ttgcagattt cctgcaaatc agggtttttc gtatctaaaa
     7021 cacgcaaagg attggttttc agacggcgtt tgctgtcttc gtccaattta tcttcatagc
     7081 gtgtcaaata ttcaaccaac gccgcacggt gtgccgctcg ctcctcacgg ttgcctaagc
     7141 tattgatttc caaagtcagg tattcgcgga tacccaattt ttcccacaag tcggcagaca
     7201 tcgcgatgat ttccgcatcg atatccggcc cttcaaaacc caaagcctcg ataccgacct
     7261 gatggaattg acgataacgg cctttttgcg gacgctcgcg gcggaacatc ggccccatat
     7321 accacagctt ttgcgggctg ttgtacagaa ggttgtgttc gaccaccgca cgcagacaag
     7381 aagccgtacc ttccggacgc aggctcaaac tcaaagaatc gtttgaatcg gaaaaggtgt
     7441 acatttcctt gccgaccaca tcggtttctt cgccgatgga gcggacaaac aaaccggttt
     7501 gctcgacaat cggcgtacgg atttgctgat agccgtaagc gcgcgtccag cggtttaccg
     7561 tatcctcaaa cgcctgccaa aacgcagccg tcagtttgaa atctttttgc tcgacaggca
     7621 gaaggtcgtt catgcctttg acggattgga ttttttgtgc catttcaagt aagaatgctt
     7681 aaatcaaatt gcgggcgatt atagcggatt tttaagggtt tgtgaggttg ggggtggttt
     7741 gcggacgggt aaaatgccgt ctgaaacagt tttcagacgg catttgactt actctgcacg
     7801 tgcttgcctg atttgtcgga ctgcaaactc tgtctgccgc ttgggatgat gtgtgaaaaa
     7861 caatttattt gaaattgtct cggctttttt cggcacgacc gccaaaatct tacctgccaa
     7921 atttccctca cgggtttgcc aagcatccaa aaactgcgcc ctgctcatcg aaacatgacc
     7981 cagcgacggg tcggcaagca aaaccgtatt gccgtctata ccgcgcaata ccgagaaatg
     8041 atcatcctta cggtatttca gatacacgat gacggggatt ttcaactgcg cgagctgctc
     8101 gaaagacagg gcatagcctt tcgcttcaaa acccaaatct ggcataatgc gccgcatatc
     8161 ctcaaacgac gcgcgcatct gctccttatc cagctttttc aacacttctt cttccgtcag
     8221 cgtttgcccg taaaaattgt tcaaaagcgt cgccaccgaa gccgccccgc aggaaaaatc
     8281 caaatcctgc tttacaatat tgaaatcccg ccgcgctttc caactctgca ctttgatttt
     8341 tccgtaaaca acaggattat cgttaaacat cggtgcagca ttcagacgat aagataaaga
     8401 aacgacaaca cacgccaaca gaaaaacata tttgaacttc atcatattgt ccacataaag
     8461 ggcagcctga aaatctttca ggctgccctt gtcaaattat tcctagcttt cggctttttt
     8521 ggcaaaccaa acaatccgat tacccgcata atactttcca tttattgaaa tccgacaagc
     8581 cgcgcccaaa aatgccatgc actgtcgatt tccgcagcaa tctttgtacc gttttcttca
     8641 aattccaaat attcacccaa taataaactt gaaacagaac gcgtgggcag caagtgccca
     8701 ccctacgctt attcaaataa tttgattaaa taaagaataa agaaaatgca tcaggaacaa
     8761 aattataatc tgccacctga ctcacaccgc ttttaaagta aggggcatca aaatcaaaac
     8821 cgcaaaaaaa ataatttttg cattgatttt taatagattt aaaattcgaa tatagtgttt
     8881 ctccagattt aaaaagttta tctttatcta tatatttgat gctttcccta tccaaaataa
     8941 atattcaaac attaaaaaat cattacatga ccaagccaaa tcataaattt gattcaaatg
     9001 ggtatcataa agataaaaat aataaggttt gggaacaggt aaaatattta atggaaaagg
     9061 aggactaatt ttcttaatat ctgatgactg atatccatat ctttctatat tcttaaaaat
     9121 ttcatctttc ttaagataac aagacattct gaagataaca agacattctg acaatcacaa
     9181 cctgttcatc ggatatatta tctatttgca tggcgcgtat aacacgccat gcctgattaa
     9241 aattagtctc ccttacctta gaatctatta tcttttccaa agatgaaaat gccccttatc
     9301 ttgaactctc cagttagaac ctggaagttt cgtacctctt aaatgtgtat taatatttct
     9361 tatagtttca ttaaaatgcc acgcgctgcc gatttcaacg gtaattttcg taccgctttc
     9421 ttcaaattcc aggtattccc ccattagcta acgcaaagaa gcagacgcca tttcggcttc
     9481 gttatgataa acccgccttc cgttgatata gacttccgcc cctgtccgct ccaaattcca
     9541 aaaattccgt actgaaattt ccatatcccg atattgtgca gaccatgttt tttcgaaggt
     9601 tttcataaaa tttcctatac ctgtccaatc ggcacatatc aattgcatta
//
LOCUS       DAXHKG010000074         9557 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.074, whole genome shotgun sequence.
ACCESSION   DAXHKG010000074 DAXHKG010000000
VERSION     DAXHKG010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9557
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.074"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            205..1254
                     /locus_tag="ACFMWP_001357"
     CDS             205..1254
                     /locus_tag="ACFMWP_001357"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC5891948.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKGETRKTATQAY
                     GQKASDGIKPQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWITNGWITVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANILK
                     WAEMLLPGEYRRKKA"
     gene            complement(1323..2864)
                     /locus_tag="ACFMWP_001358"
     CDS             complement(1323..2864)
                     /locus_tag="ACFMWP_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HFC5891949.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGTSAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYGVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(3157..4512)
                     /gene="xseA"
                     /locus_tag="ACFMWP_001359"
     CDS             complement(3157..4512)
                     /gene="xseA"
                     /locus_tag="ACFMWP_001359"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HFC5891950.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYDRLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGTGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            4709..5530
                     /gene="nadE"
                     /locus_tag="ACFMWP_001360"
     CDS             4709..5530
                     /gene="nadE"
                     /locus_tag="ACFMWP_001360"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HFC5891951.1"
                     /translation="MMRIFSTGGKMDTQAVITHIARWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRPTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(5598..6071)
                     /gene="dnrN"
                     /locus_tag="ACFMWP_001361"
     CDS             complement(5598..6071)
                     /gene="dnrN"
                     /locus_tag="ACFMWP_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HFC5891952.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            6369..6701
                     /gene="trxA"
                     /locus_tag="ACFMWP_001362"
     CDS             6369..6701
                     /gene="trxA"
                     /locus_tag="ACFMWP_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HFC5891953.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(6754..7701)
                     /locus_tag="ACFMWP_001363"
     CDS             complement(6754..7701)
                     /locus_tag="ACFMWP_001363"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC5891954.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            8029..9417
                     /locus_tag="ACFMWP_001364"
     CDS             8029..9417
                     /locus_tag="ACFMWP_001364"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC5891955.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPTDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
BASE COUNT         2333 a         2658 c         2534 g         2032 t
ORIGIN      
        1 ttgaaagatt ctacccccgc acgcaaaccg atttcaaccg ttgcacaaac tttgcctcgc
       61 cacaagccgc agcgacgatt tcatccgcaa aaccgccgca tcaggtacaa tatcgaaccg
      121 tccgactgag gacggcattt tatcaacccg tcctgccgca tacgccgcag aagaaccgct
      181 ttatcaagcg agttaggaaa aatgatgtcc aaacagccca ccagcaaacg ccaatggcgc
      241 gacggcgcag ccccgtctgc caagaaaacc gccaaacctt tcaaaagcaa agcccgtccc
      301 aaaggcgaaa cgcgcaaaac cgccacccaa gcttacggac aaaaagcttc agacggcatc
      361 aagccgcaaa acgcccccaa acagcgcgcc gccaaagcca aaaaactcgt cgtccgcaat
      421 cccaaccaaa aaattatgga acacgcgcgc gatttgaaag aacgccgcag cgacctgtcg
      481 cgcatggaac ccgaacgcct gcaaaaagtg cttgccgcgt ccggcgtcgg ctcgcgccgc
      541 gaaatggaag aatggattac caacggctgg ataacggtca acggcaaaac cgcgcaactg
      601 ggcgacaaag ttacccccga cgaccacgtt accgtcaaag gcagcatcat caagctcaaa
      661 tgggcggacc gcctgccgcg catcatcctg tattacaaac aagaaggcga aatcgtttcc
      721 cgtgacgacc cgcaaggccg cgtcagcata ttcgaccgcc tgccgcaggc cgccagcagc
      781 cgctgggtcg ccatcggacg cttggacatc aacaccagcg gacttctgat tcttaccacc
      841 tccggcgaac tcgtccaacg tttcgcccac cccagcttcg aagtcgaacg cgaatacgcc
      901 gtgcgcgtct tgggcgggct gaccggcgaa caaatgcgcg tcctcaccga agaaggcgtg
      961 atgctcgaag acggcttggc aaaagtcgaa cgcatccgcg aacaaggcgg cgaaggcgcg
     1021 aacaaatggt acaacgtcgt gattaaagaa ggccgcaacc gcgaagtgcg ccgcattttt
     1081 gaaagccaag gactcaccgt cagccgcctc gtgcgcgtcg gcttcggtcc catcggactg
     1141 cccaaccgcc tcaaacgcgg gcagttctac gaactcaacc ccgccgaagt cgccaacatc
     1201 ctcaaatggg cggaaatgct gctgccgggc gaataccgcc gcaaaaaagc ctaaacccgc
     1261 caaaacacaa aaatgccgtc tgaaacatct gctgtttcag acggcatttt attcgggcgt
     1321 tttcaggaga aaaggtcgag tgctttgaca aagaccatca ccacgccgta ggcgagtggt
     1381 atgacggcca atgcccaacg ccaccagacc gatatgccgc cgccggaaac tttttcgccc
     1441 acaaggtaag cgtcggatat ggcggtttcg tcgtcggggt tgccgctgtg tgcggcggtt
     1501 ttgatgtctt tttcgtggtg tttttcgtgt acggatttga cggcgaggtt gcacaacaaa
     1561 ccgataatca gcaggcacgc catgatgtac atggttacgc cgtatgcctg tgccgccggt
     1621 atgccgctgt cgatttggct ttggcgtatg taattgacca gtaccgggcc gatgacggcg
     1681 gcggttgacc aggccagcag gatgcgcccg tgaatcgcgc cgacctgata ggtgccgaac
     1741 aggtctttca ggtaggcggg aatggcggca aatccgccgc cgtacatgga aataatcacg
     1801 caaaagccga tgatgaacag ggctttgctg ccgccctcgc cgatggaggg aacggcgaaa
     1861 tacagcagcg agccgagtac gaagaagatg gtgtaggtgt ttttgcgtcc gattttgtcg
     1921 gaaacgctcg accacaaaaa gcgtccgccc atgttaaaca ggctcaggag gctgacgaag
     1981 cctgccgccg cacctgcgcc gactgctgcc tgcctgccta tggaggtttc ggaaaagagt
     2041 tcctgaatca tcacggatgc ctgacccaat acgccgatgc cggcggttac gttcaggcac
     2101 aatacccaga acaacagcca aaactgcggc gttttcatgg cttgggacac gttgacatga
     2161 ttactgctga ccagcttgtt ttgcgttttc ggcgcggtat agccttcagg tttccagccg
     2221 tcggcaggta cgcggatggt aaacgcgccg aacatcatca gtgcgaggta aagcaggccc
     2281 aatacggcaa aggtttcggc aaccccgacc gaagcggcgt ttgaaaaggc gttcatcagt
     2341 gatacggaaa gcggagaggc cagcattgcg ccgccgccga aacccataat cgccaaaccg
     2401 gtcgccatac ccggcttgtc gggaaaccat ttcatcagtg tggaaaccgg cccgatgtag
     2461 cctaagccta agcctacgcc gccgatgacg ccgttgccca aatagagcag gaagaggttg
     2521 tgcgtacgca cgccgaatgc ggatacgaag aagcccaggc tgaaacagca ggcggcggca
     2581 aatatggctt tgcgcggacc tacccgttcc atccatgtgc cgaacagggc agccgacgtg
     2641 cccagcatcg cgagtgcgat actaaaaatc caacctacgg tcgtcagctt ccaatctccg
     2701 gccgccgatt cggttatgcc gataagtttg gtcagcggcg cgttgaatac ggaataggcg
     2761 taaatctgcc cgatggcaag gtgcaccgcc aatgctgcgg gcggtacgag ccaacggttg
     2821 aaacccggct tggcaatgct tgcctcacgg tctaaaaact tcataacatc ctctttctgt
     2881 cagttgaaaa ataaaatttc atttgcccaa tggaaactta ttgaaaatta taaaaaaata
     2941 tcggatcggt tttttatccg ccccaagatg ccccgtctga aacatttcgg gtgtacggaa
     3001 aggtttctgt tttttccgac aaattcctgc ggcttttcgc ttccggattc ccgctttttc
     3061 aggaatgacg aattaaagat tatcttaagg tcaagggact ggattcccgc tttcgcggga
     3121 atgacggcgg agggggagcg gtttttccga ttgggtttaa atgcaatcga acaaatcctg
     3181 ctgcccttgt tctttgctta cgcgcacgtc ggtttcgccg tcggcgaagg taatgtgcag
     3241 cttctgcccc tgcttcaaaa catcggcgtt gcggatgact tgtccgcgtg tatctttgac
     3301 gacggaaaag ccgcgttcca aaatgtgctg cggcgaaacg gcttcgagca atgcggcttg
     3361 ggcggtcagg ctttggcggc ggtgggtaag cagttggctg aaggcggcgg gcaatgccgt
     3421 ctgaaggcgg acgatgttgt ttttgcaaac ggaaacatca ggacggtaat gttgcagggc
     3481 ttgggtttgg cgttcaaaac gggcggtgtg ggcacggagg ttttgcttca tagagtaaga
     3541 cagcgtttgc gccagcttgc cgattgaagc gcgctgctca tcaagttttt ggcgcggatg
     3601 acggatttgc cgcgcaagcc agtcgagttt ttggctggca tcgaaatagc gttgttccaa
     3661 aacggttttc agacggcctt gcgcctgagc gagacgatgt agcgattctt ggcggttggg
     3721 gctgaccagc tccgccgcac cggtcggcgt gggcgcgcgc acgtcggcga caaaatcggc
     3781 aagcgtgaaa tcggtttcgt gtcccacgcc actgacgacg ggaaccgtgc aggcttcgat
     3841 tgcgcgcacg accggttctt cgttaaacgc ccacaagtct tcaatgctgc cgccgccgcg
     3901 acagacaatc aacacgtcgc attcggcgcg ttgcgaggcg gttttaatcg cttgtgcgat
     3961 ttgtaactcg ctgcctgtgc cttgaacagg tgtcggataa acgataacgg ggatttcggg
     4021 tgcgcggcgt ttcaaggtag taacgacatc gcgcaaagcc gccgccgcca gactggttac
     4081 gatgccgata cattgcggtc gggcgggcaa aggtttcttg cgttccgccg caaacgcgcc
     4141 ttccgcctgc aactgcgcct tcaaccgatc gtaggcttcg taaagctgcc ccaagccctt
     4201 gagccgcact tcgttcacgg taatctgaaa ttcgccccgc gtttcataaa tactgatttt
     4261 gcccgccact tcgatatggt cgccttcttt caaaggtttc gccaaacgcg ccgccgcacc
     4321 cttgaacatc gcgcaacgca cctgcgcgcg gctgtctttg agcgagaaat aataatgccc
     4381 gctggcggca cgggtcaggt tggacacttc gcccgcaatc cacagaccgg caaggtggtt
     4441 ttccaaaata cttttggcaa atgcgttcaa ctcggaaacg gacaacacgt cagaatggaa
     4501 aaaatcagac atcgaatcaa tcaaatagta aaaaatatga atatgttttg aagcccaagg
     4561 cggcatagag ccgcctaaat tgtcaacaat attataacac gcgccatctt gccgcccgcc
     4621 ttttcccata tgactttttt aagcggggaa tgggaaaaat attcatcaac ctgcctgcaa
     4681 tctattcaaa ttgaaccgcc gacaagctat gatgcggata ttttcgacag gaggaaaaat
     4741 ggatacgcag gcagttatca cacatatcgc ccgatggttg gacgaatacg ccgcacgggc
     4801 aaatgcaaaa gggtttgtcg tgggcgtttc cggcggcatc gattccgccg tcgtctccgc
     4861 actcgccgcc cgcaccggcc gccccacgct gcttctggat atgccgatac gccaacaccc
     4921 cgaccagctt gagcgggcaa ggctgcacat ccgcaatctg caacggcaat atgccaatgt
     4981 aagcgcgcaa acggtcgacc tgaccgacac cttccagacc tttgaacaaa ccgtcggcat
     5041 tcatcagacg gcatttgaca atcagccgct ttccctcgcc aacgccagaa gccgcctgcg
     5101 tatgctgacc ctgtactact acgggcagat acacggactg ctggttacgg ggacaggtaa
     5161 taagattgaa gatttcggcg tgggcttttt tactaaatac ggcgacggcg gcgtagacat
     5221 cagcccgatt gccgacctga ccaaaacgca ggtttaccgg cttgccgaag cattgggcgt
     5281 ggacgaggcg attcaaaaag ccccgccgac cgacggcctg tgggatacgg aacgcaccga
     5341 cgaagaacag atgggcgcaa gctatcccga actggagtgg gcaatgggcg tgtacggcac
     5401 gcgcaaaccc gaagattttg aagggcggca gcgcgaagtt ctggaaatct atacgcggct
     5461 tcaccgcgcc atgcagcaca aaatcaaccc gattcccgtg tgccgcatcc cgcccgaatt
     5521 gttgggctga acgtgaaaat gccgtctgaa gcggaaaacc gtgtttcaga cggcatggaa
     5581 atatccggac gcgctcctta agaatcgagt acgcgggcaa acagaatatc gttttccaaa
     5641 tgaatgtggt cgttcaaatc ctccaccatt tctttcgcca gcgcgtaaag ccgcgtccag
     5701 cttccgcaag ccccttctgg cggttggaaa ttgtcggtca gctctttgag ccgtgcgatg
     5761 gcgcggtcgt gttcttcgtg ttcgtgcatc atcacgctga tgggcattgc cgcaccgcgt
     5821 ccgacaccct gattaatcat cggaaacagc atcctttcct ctttcatcat atgcatcagc
     5881 agttcgttct gcatataggc aagcagcccg gcaatttccg ccggaaaggt atcggcatgg
     5941 acttgggcca ctttctgagc cagcggcacc aattcttcaa attgtgcgcg gtggacattg
     6001 tggtagcgtt gcaggatatg atcgacggtt gcaccaaagg gggcggtctc ccaaacggaa
     6061 aaatcagtca tcgcagtgtt ccttttacag ggtttcgggt ttggttttga acattcatac
     6121 tttaagaatc aattcaaacg gagcatacac cgcccgcgcg cttctgtaca gcctcaaacg
     6181 tattccttac attttgataa taaaagtaat tttcagaaat aaaatactgt ccgaaccgtt
     6241 ttttagaatt tgcaaaggcg attggggcgg tacagaaaaa ctattatccc gcccgcccac
     6301 ttgaaatttt tatgcccaag ccctatcctg cacgctatcg tgccaatccc aaccgaaaag
     6361 gaaaaataat gagcagcgaa ttgattgtac acaccagcga tgccgctttt gaaaaagacg
     6421 ttttaaatgc agatatcccc gtcctgctgg acttttgggc tccgtggtgc ggcccctgca
     6481 aaatgattgc cccgattttg gacgacattg ccgccgaatt tgaaggccgt ctgaaagtgg
     6541 tcaaaatcaa catcgacgac aacgaagcca ccccgtcccg tttcggcgtg cgcggcattc
     6601 cgaccctgat ggtgttcaaa aacggcgaag tcgtcgccac caaagtcggc gcattggcaa
     6661 aaggtcagct gaccgccttt gtcgaagcct ctatcgcctg ataaagcgca atcgaaaaag
     6721 ccgccggaag attccggcgg ctttttcgca cccttaagat ttgtggcgga tttcccagca
     6781 cctatggatt tttttgttgc ggaaatcttc gggaacggat tgtttggaaa tgtctttgac
     6841 ggcgtattgt tccgatacca agtcgtctaa gacgaagctg cgcaggttgt tggaaaagta
     6901 caaaatgccg tctgaagcga gcagcttcac cgcgccgtca atcagctttt tgtggtcgcg
     6961 ctggatgtcg aggatgtcgg acattttctt gctgttggaa aaactgggcg ggtccatcac
     7021 aatgaggtcg aaccgcctgc cttccccata tgccgtctga agatattgga acacgtcggc
     7081 gcggacgatt ttatgccgtt ccgtatcgat gccgttcaat tcaaaattgc gtctcgccca
     7141 atcgagataa gtgttagaca aatcgacagt ttcgctggat gccgcgccgc cggtggcggc
     7201 atagacagtg aagctgccgg tgtaggaaaa caggtttaaa aaacgtttgc ccgccgccgt
     7261 ttcgccgact tttttgcgcg tgtttcgatg atccaaaaaa agccccgtat ccaaatactt
     7321 atcaaggttg acccaaaact tgcggccgtt ttcggtgatg acgaaatcgt cgcccgcctt
     7381 gccggttttt tcgtattgct gcaaaccttt ttggcgttcg cggcgtttga ggcggatttg
     7441 ttcgggttca aaaccggtaa cgaaagcgac ggcttccaag acttcggcaa gccacgcttc
     7501 gtattcttcg ggccgcatca gccagccggt atcgtattcc tgaaggtgga ttcgatcgcc
     7561 gtaaacatcg gcggcaaagg ggaattgggg gatgtcgcgg tcgtaaatgc gccaggcttc
     7621 aatgccgttg cgtttcgccc atttcataag gtgtttgatg tttttgccca agcggttggc
     7681 aaacggtgtg atgtcggtca ttggtttcag gcggaataaa gtggaaaacg gcaattttac
     7741 tgtaattaac gcccgattgc ttgaccgttt cgggcaaacc ctataccatc cgccgcttat
     7801 cttgtcatac gaagccatcg ccttccaacc taaaccgccc ttacgggcgc gtttcttttg
     7861 ttgctttgat tttgcaaagc ctttctgtgc aggttgtcgt cgatgtaaac cacaagcaag
     7921 ccgcttgcga caaccctgta acttcacatt ccccgtatcg ttacccttcc ctgcttcagg
     7981 ccgtctgaac ctttcggacg cgggcgttgt tgtcttccaa ggatagccat gtctattaaa
     8041 tttgccgatt tgaaccttga taaaaacatt ttgtccgccg tcagcagcga gggttacgaa
     8101 agcccgacgc cgattcaggc gcaggcgatt ccgtttgctt tggaaggccg cgacatcatg
     8161 gcttcggcgc aaaccggctc cggcaaaacc gccgcctttc tgttaccgac tttgcagcga
     8221 ctgaccaaac gcagcgaaaa accgggcaaa ggcccgcgtg ctttggtgtt gaccccgacc
     8281 cgcgaattgg cggcacaagt ggaaaaaaac gcgctggcgt atgccaaaaa tatgcgctgg
     8341 ttccgtaccg tcagcatcgt cggcggcgca tcgttcggct accaaacccg cgccctgagc
     8401 aaaccggtcg atctgattgt cgccacgccg ggccgcctga tggacctgat gcaaagcggc
     8461 aaagttgatt ttgaacgttt ggaagtgctg attttggacg aagccgaccg tatgttggat
     8521 atgggcttta tcgacgacat cgaaaccatc gtcgaagcca ccccgaccga ccgtcagact
     8581 ttattgttct ccgccacttg ggacggcgcg gtcggcaaac tggcacgcaa actgaccaaa
     8641 gaccctgaaa tcatcgaagt cgaacgcgtg gacgaccaag gcaaaatcga agaacaactg
     8701 ctgtactgcg acgatatgcg tcacaaaaac cgcctgctcg accacatcct gcgcgatgcc
     8761 aatatcgatc aatgcgtgat tttcacgtcc accaaagcga tgaccgaagt catcgcggat
     8821 gaattgtacg aaaaaggttt cgccgccaac tgcctgcacg gcgacatgcc gcagggctgg
     8881 cgcaaccgca cgctgatgga tttacgcaaa ggccgctgca aaattttggt tgccaccgac
     8941 gttgccgcac gcggtatcga cgtaccgacc attacccacg tcatcaacta cgacctgccg
     9001 aaacaggcgg aagactacgt ccaccgcatc gggcgcaccg gccgcgcagg ccgcacgggt
     9061 attgcgatta cgtttgccga agtgaacgaa tacgtcaaag tccacaaaat cgaaaaatac
     9121 attaaccgca aactgcccga actgaccatc gaaggcatgg aaccgacccg caaacgcaaa
     9181 tccgcaggcg gtaagccaaa aggcaaaggc ggctggggcg ataggaaatc cggcggccgg
     9241 cgcggcgatc ataaaccggg caaagaaggc ttcggcggca aaacgcgcgg cgaaggtttc
     9301 aagaaagaag gctttaagaa agacggtttc aaaaaaaccg gcgaaggctt caaaggcaaa
     9361 cgtaaagccg gcgattcttt tgcaggcaga ggcgaacgcc gttacaaaga ccgctaagcc
     9421 ccaacctgcc tcataaacca atgccgtctg aaaccgattt cgagtttcag acggcatttt
     9481 tgcaatgttt caacaccgcc cggctttgat acccaaagga ttaatctgca atatagtgga
     9541 ttaacaaaaa ccagtac
//
LOCUS       DAXHKG010000075         9521 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.075, whole genome shotgun sequence.
ACCESSION   DAXHKG010000075 DAXHKG010000000
VERSION     DAXHKG010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9521
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.075"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(75..1496)
                     /locus_tag="ACFMWP_001365"
     CDS             complement(75..1496)
                     /locus_tag="ACFMWP_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HFC5891956.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1854..2213)
                     /locus_tag="ACFMWP_001366"
     CDS             complement(1854..2213)
                     /locus_tag="ACFMWP_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HFC5891957.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2210..2815)
                     /locus_tag="ACFMWP_001367"
     CDS             complement(2210..2815)
                     /locus_tag="ACFMWP_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HFC5891958.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2862..3344)
                     /locus_tag="ACFMWP_001368"
     CDS             complement(2862..3344)
                     /locus_tag="ACFMWP_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HFC5891959.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3548..3645
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3856..4956
                     /gene="gcvT"
                     /locus_tag="ACFMWP_001369"
     CDS             3856..4956
                     /gene="gcvT"
                     /locus_tag="ACFMWP_001369"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HFC5891960.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVSFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVHNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPNDF
                     DGDTAKVLIRGKEADVRVLKLPFVRNGQKQFD"
     gene            5119..5505
                     /gene="gcvH"
                     /locus_tag="ACFMWP_001370"
     CDS             5119..5505
                     /gene="gcvH"
                     /locus_tag="ACFMWP_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HFC5891961.1"
                     /translation="MSSNIPAELKYVASHEWLRLEEDGIITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGW
                     FFKLKPANVADYDVLLTAEQYAGEVD"
     gene            5657..6904
                     /gene="hemA"
                     /locus_tag="ACFMWP_001371"
     CDS             5657..6904
                     /gene="hemA"
                     /locus_tag="ACFMWP_001371"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HFC5891962.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHEYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIRALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSIQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            7231..7752
                     /locus_tag="ACFMWP_001372"
     CDS             7231..7752
                     /locus_tag="ACFMWP_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
                     /protein_id="HFC5891963.1"
                     /translation="MSCFSIKRMSAFRARITVFFTAFVFLTAALPAYAERLPDFLAKI
                     QPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSNKPIDTLMALA
                     NDGTIAGAKLVDHHEPIMLIGIPHLPAPMRAIRSNWLPAYIKPNFISTNRLRLKGLLT
                     VLQPSKETGADVR"
     gene            7641..8840
                     /locus_tag="ACFMWP_001373"
     CDS             7641..8840
                     /locus_tag="ACFMWP_001373"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HFC5891964.1"
                     /translation="MASGVYQTKLYIDKPITIEGPADRSATIEGDRSGRTIAVHAPDV
                     TLRNLTVTRSGMSLPAMDAGIYLEETAPRALIEHNNILDNSVGVYLHGSADAMVRENK
                     IVGDATLRVNERGNGVTVWNAPGAQVVGNDISKGRDGIFSNTSTHNTYKNNRFSDLRF
                     AVHYMYTNDSEISGNISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIH
                     DNIINKAGKCVFAYNANYDKLSANHFENCQIGIHFTAAIEGTSLHDNSFINNESQVKY
                     VSTRFLDWSEGGHGNYWSDNSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVLRLLMNSL
                     AISIVKWAQAQFPAVLPGGVVDSKPLMKPYVPKIQTRYQAMKDELLKEAETRQSEWGR
                     AENGSLN"
     gene            8898..9512
                     /locus_tag="ACFMWP_001374"
                     /pseudo
     CDS             8898..9512
                     /locus_tag="ACFMWP_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
BASE COUNT         2423 a         2358 c         2627 g         2113 t
ORIGIN      
        1 tgtcggaagg ggggatattg atttgattat gccggaattt aaaatgccgt ctgaatgttc
       61 agacggcata gcgtttacag cagtttgaaa acgaaaaaga taagggtatg tacgatgaag
      121 acgggtgtca ggaaggcgac cgaccacatc atatagccga agaaagtcgg catcggtacg
      181 ccgcgctgtt cggcaatggc cttgaccatg aagttcggtg cgttgccgat gtaggtcagt
      241 gcgcccatga ataccgaacc catagaaacc gccagcagcg aatgaaacag ggtacccgtc
      301 atcaaggctt gggcatcgcc gcccgccata ttgaaaaaaa cgagataagt gggcgcgtta
      361 tccaagaatg ccgacaatat gccgctcatc caaaaataca tcgtattaat cggatgacct
      421 gccgtatcgt gaaccagcga taccaccccg cccagcgcgc ctgcctcgcc tgctttcaga
      481 atgctcagga cgggaaagat ggtgatgaag atgccgagga agagtttgcc cacttcggcg
      541 atgggttcaa agttgaattc gttgcctgcg cggacttgtt tgggcgtgat tgccatagat
      601 acggcggtca atgcaatcag gatgacatcg cggacgaggt tttgcagggc gtaacggctg
      661 ccgaggattt caaatcccgg gtgttcgggt ttccaaaggc cggacattag aaccgcgccg
      721 accacgcccg aaagcaggag gaagttccat ttgccgaaga tggcgatttt ttcgggtttt
      781 tcctgttgtg ccggcgtatc ttgtgcaatg ctttcctgtt tgaagaaacg gttgtcgatg
      841 aaatagaagg cggtcaacag gacagcggtg ctgatcagga cgggggcgaa catatgtttg
      901 accgtccaca tgaaatctac gcctttgagg aagccgagga agagtggggg gtcgcccaaa
      961 ggggtcagac cgccgccgat gtttgcaacc aggaaaatga agaagatgac gatgtgcacg
     1021 cggcgggtac ggttttggtt ggctttcagc agcggacgaa tcatcagcat tgctgcgccg
     1081 gtcgttccca tgatagaggc aagtgccgta ccgacggcaa gcagggcggt gttgagcttg
     1141 ggtgtgccgt tcaagtcgcc ccaaaccaaa atgccgcctg aaatggtgta cagggcaagc
     1201 agcagcagga tgaaggggat gtattcttca acgagtgcgt gtgcgacggt atggataccg
     1261 gcggacgcgc caaaaaccaa actgaacggg atgaggaaga gcaatgtcca aaaggcggtg
     1321 attttgccgt aatggtgatg ccaggtatgc gaaaaaaaca agggacccaa tgcgatagac
     1381 agcaaaatca gggcaaaggg caggctccac agcaggttta ggtttgcgcc gtccaaatct
     1441 gcggcgtaaa ccgatgcggg gaaaagcatt agtgaaaaca ggggtaggtg gcgcatcgtg
     1501 tttcctcgat tcaagcactg ccttgcgcgg cgcgtgggag tgatacaggc accgtgccgc
     1561 ccggacatag gcggactgtg ctgcctgttt gtttttgaaa aaagttttcc gattgattgt
     1621 aaagtaaata atcaggataa accagtttcc caaaccggaa ggcggcggga aggcggattg
     1681 ctgtgcttgg gaatatatgt tctttttgat aaataatttt atttaaaaca aataaatata
     1741 tgtctttaat aaataatcta tcgaaaacga aaaatgaatt tattttaaca tatatttgca
     1801 atgaaacagg tttgcccccc gtttgtttgc ccttatccct ttcagtacgg cattcaagat
     1861 tcgggcctgc gccacatcca tatggcgaca agggaacaaa aaaccgatga aaccgccccg
     1921 acccaccagc gttggggaaa ctgccaaaac attatcaggc aggatgcggt catcatactg
     1981 atggcgaata ttttggcttt gcgcggcact gcgccgtttt gttcccagtt atgaaccatc
     2041 ggaccgaaat agcggtgccg gtgcagccag cggtgaaagc gcggggatgc ctttgcccag
     2101 caggcggcgg agagcagtac gaacggcgtg gtcggcaaca gcggcaaaaa aatgccgatg
     2161 atacccaaca gcagggagat gcagccgcag gcaattaaaa gataacgtat cattttgaaa
     2221 tatttttctt attgtgcgga taagggcagg atgtgatacc gagttttgcc cagccttcat
     2281 gtcccatttt ttccagcagg gcgatattgc gttcgaatat tgccgaagcg tcgggaaagg
     2341 cttgtgcggc tttggcaatg ctgtcttcgc ggatgaggtg cagcgtcgga tagggagaac
     2401 ggttggtgta gttgccgatg tcgtcgggtt cggtattctg aaagcggaat tggggatgga
     2461 acggtgcgat ttggacgatg ccttccaagc cgttttcgat aacggcggca tcggcaatat
     2521 cgagcatatc gttgaatacg tcgaaatcgg ggaatagggt cgggtgaacc agcagggtgg
     2581 tttccagttc ggtggcgggt gtattgccca gtcgctgcag ttcttcgtcc aagtcttcca
     2641 aaaaactgtc aaggtgtttg gcttcgctga ttgcgatgcg gacaaggttt ttaacgtggg
     2701 gggctttggc aaagggacac aggttcagac cgatgacggc tttttccaac cattgtccgg
     2761 tgtgttcggc aacagcatct ttattttcgg aagtattgat attcattatt gtcatgtaaa
     2821 tgtgtttgca gattgcacgt gcgggaaaat cgggaagggc actattcctt cagcaggtgg
     2881 ttgagcggca gggaggtggt gtgtttgatt tcttttaaaa caaagctcga ttgcgcatct
     2941 tgtacgccgt ggtgggacag gagcgtatcc aaaacaaaat gggaaaacgc gttcatatcg
     3001 gtaaaaaacg cctgaagcag gtagtcggtt tcccctgtca gggcgaagca gctcaagact
     3061 tcaggccatt ttcgaaccga tgcggcaaag tcttcccgcg cgtcttttgc tttgcggatg
     3121 gaaacgcgga taaatgcctg aagccccagg ttgacggatt ccggagacag cagcgcggca
     3181 tattggcgga cgatgccggc atcttccaac tgcttcagac ggcgcaggca cggagaaggc
     3241 gaaagtgcga cacgttcgga cagttcgaca ttggtcagcc tgccgttttc ctggagaacc
     3301 tgtaagattt taatatcggt tttgtctaaa gtgagttggg gcatatttgc gttccgtttt
     3361 aaggaattcg gattgtctgt ccgtatgttt gcggcaatcc gcacagatgg agaccatatt
     3421 aacatataaa aagttatacc gtcatccggg acaaattttg ttttcggaaa atcatgtgaa
     3481 aacagaggcg gtcggtttgc atctctttta agacggcttg cccaaaccgc cgattcaaga
     3541 cataatcggg aaatgtgcag gagagtgtta cacccaacta caatgtaacc accgaaggcg
     3601 cagacaccct taaatcgctc aggtatcagg gactgcacat tgaaacaaac aatctggaga
     3661 gcggcgttgg aataacgtcc accgaagggg agaaggccgt ctgaaccacc attcagacaa
     3721 ccgcgcaaag cagtgagcag actggtttgc catcatgcgg atacggccga aaatctcagg
     3781 ttcaaggaca gatagggtca tccgcgcaca ggtgcgcggg tggcatctga acaaaaaatc
     3841 cggagaaact tgagaatgat tactctgaaa accaccccat ttcatcaagc ccatcaagat
     3901 gcaggcgcga agccggtaga ttttgccggc tgggagctgc ccatccatta tggttcgcaa
     3961 atcgccgaac acgaagccgt gcgcaccgac gccggtatgt ttgacgtatc ccatatgctt
     4021 gttaccgacg tagcaggcgc aaatgccaaa gcctttttcc gcaaattgat tgccaacgat
     4081 gtcgccaagc tcgcttttgt cggcaaagcc ctttattccg ctttgctcaa cgacaacggc
     4141 ggcgtgattg acgacttgat cgtttaccgc accaatgaag ccgaaaccca ataccgcatc
     4201 gtgtccaacg gcgcgactcg cgaaaaagat acggcacaat tccacaaagt cggacaagag
     4261 ttcggtgttt ccttcaatcc gcgctacgac ctcggcatgc tcgccgtaca aggccctaaa
     4321 gccattgaaa aactcctgac cgtcaaaccc gaatgggcag atgtcgtcca taacctcaaa
     4381 ccgttccaag gcgcggattt gggcaacgac tggtttgtcg cccgcaccgg ctacaccggc
     4441 gaagacggcg tcgaagtcat cctgcccggc accgaagccg tcgcattctt caaagccctg
     4501 caagcagcag gcgtacaacc ttgcggtctc ggcgcgcgcg acaccctgcg catggaagcc
     4561 ggcatgaacc tctacggcaa cgatatggac gacgatacca gcccgctcga agcaggcatg
     4621 ggttggaccg ttgatttgaa agacgaaagc cgcgattttg tcggcaaagc tgccttgttg
     4681 gcattgaaag aaaaaggcgt tgccgtcaaa caggtcggtt tgctgctcgg caaaggcggc
     4741 atcctgcgcg cgcatatgga agtgttgacc gacaaaggca aaggcgaaac caccagcggc
     4801 gtattctctc caagtctgaa acaatccatc gccatcgccc gcgtaccgaa cgattttgac
     4861 ggcgataccg ccaaagtgct gattcgcggc aaggaagcgg acgtgcgcgt actgaagctg
     4921 ccgttcgtcc gcaacggtca aaaacagttt gattaatatc ggttcagacg gcattttcat
     4981 ttcatatgcc gtctgaaagc aggttttaat tgtcgtccga tacggacgtt tgtagaaagc
     5041 attgaacaag gcatctgtgg atattgattc atgcagatgc cgtctgaaaa taacccccta
     5101 tcaatggagt atcaaaccat gagcagcaac atcccggcag aactgaaata cgttgccagc
     5161 cacgaatggc tgcgccttga agaagacggt atcatcaccg tcggtattac ccaccacgcg
     5221 caagagctgt tgggcgacat cgtgtttgtc gagctgcctg aagtcggcgc aaaccttgcc
     5281 gccgaagaac aagccggtgt ggttgagtct gtaaaagccg cgtccgacgt gtacgcaccg
     5341 attgcaggtg aagtcgttgc cgtcaacgaa gatttgccaa gcgctccgga aactgccaac
     5401 agcgatcctt acggtgcagg ctggttcttc aaactcaaac cggcaaacgt tgccgattac
     5461 gacgttctgc tgactgccga acaatacgcg ggcgaagtgg attaaaccgc ccggctgccc
     5521 gatggcaacc gccggacaaa cggaaactgc accttcagac ggcatttttg cggtcggagg
     5581 tgcagttttt tgtccgtgtt ttaaggaagc agttaggcta taataacggt ctatattcat
     5641 ctttaccgat tttttcatgc aacttaccgc tgtcggactc aatcatcaaa ccgcaccttt
     5701 aagcatacgg gaaaagctgg cgtttgccgc ggcctgcctg cccgaagccg tccgcaatct
     5761 tgcccgaagc aatgcggcaa cggaggcggt aatcctttct acctgcaacc gtaccgagct
     5821 ttactgtgta ggtgattcgg aagaaatcat ccgttggctc gcagactatc acagccttcc
     5881 catagaagaa atcagcccct acctttatac tttggggatg caggagactg tgcgccatgc
     5941 tttccgcgtc gcctgcggct tggattcgat ggtgttgggc gagccgcaga ttttaggaca
     6001 gattaaggat gcggtcaggg ttgctcaaga gcaggaaagt atgggtaaga aactcaatgc
     6061 cctgttccaa aaaacctttt ctgttgctaa agaggtccgt accgatactg ccgtcggcga
     6121 aaactcggtt tccatggctt ccgcttccgt caagttggca gagcagattt tccccgacat
     6181 cggcgatttg aatgtcttgt ttatcggtgc gggtgagatg attgagctgg ttgccactta
     6241 ttttgccgcc aaaagtcccc ggctgatgac ggttgccaac cggacgctgg cgcgtgcaca
     6301 ggagttgtgc gacaagctcg gtgtcaacgc cgaaccgtgc ctgctgtccg atctgcctgc
     6361 cattttgcat gagtacgacg tggtggtttc ttcaacggca agccagttgc ccattgtcgg
     6421 caaaggtatg gtggagcgcg cattgaaaca aaggcagagt atgccgttgt ttatgcttga
     6481 cttggccgtg ccgcgagaca ttgaggcgga agtcggagat ttgaacgatg cctatcttta
     6541 tacggtggac gatatggtca atatcgtcca aagcggcaag gaggcaaggc agaaggccgc
     6601 cgccgccgcc gaaacgctgg tgtccgagaa ggttgccgaa tttgtcaggc agcagcaggg
     6661 caggcagagt gtcccgttaa tcagggcatt gagggatgag ggagagaaag cgcgcaaaca
     6721 ggtcttggaa aatgcgatga aacagcttgc caaaggcgca acggcagaag aggttttgga
     6781 aaggctgtcg atccaactga ccaacaagct gctgcattcg ccgacccaaa ccttgaataa
     6841 ggcgggggaa gaagataaag atttggttca cgccgtcgcg cagatttatc atttggacaa
     6901 ataacggtgc gccggaaaag gatgccgtct gaaggggttt cagacggcat tttttgtgca
     6961 ggccggcaac atcgtgaaat cccacattat atcgatgtaa tcacaaagta tagtggatta
     7021 acaaaaatca ggacaaggcg acgaagccgc agacagtaca gatagtacgg caaggcgagg
     7081 caacgctgta ctggtttaaa tttaatccac tatattatcc cgtatgcgga ttggttttaa
     7141 gatttgtaaa tttaatttgc atcaaaaaat cgccgataga tgattcatat aatatcaata
     7201 ttaaagagta tcggtatatc ggggatagtc atgtcctgtt tttcaatcaa acgtatgtcc
     7261 gcgtttcggg cgcggataac agtgtttttt accgcctttg tctttttgac ggcggcactg
     7321 cccgcttatg cggagcgtct gcctgatttt ctggcgaaaa tacagccttc ggaaattttt
     7381 ccgggtgcgg accgttacgg caagccggaa ggcaagccta tggttgcccg cgtttacaaa
     7441 ggcgatgagc agttgggctt ggtctatatc acgaccgatg cggtcaatac gcgcggttat
     7501 tcgaacaaac cgatcgatac gctgatggct ttggcaaatg acggcacgat agccggagcg
     7561 aaactggtcg atcatcacga accgattatg ctgatcggta tcccgcattt gcccgcgccc
     7621 atgcgggcga tacgctcaaa ctggcttccg gcgtatatca aaccaaactt tatatcgaca
     7681 aaccgattac gattgaaggg cctgctgacc gttctgcaac catcgaagga gacaggagcg
     7741 gacgtacgat agctgtgcat gcgccggacg taacgctccg caacctgacc gttacccgtt
     7801 ccggtatgag cctgcctgca atggatgccg gtatttatct cgaagaaacc gccccgcgcg
     7861 ccctgattga acacaacaat attttggata attcggtcgg cgtatatctg catggttctg
     7921 ccgatgcgat ggtgcgcgag aacaaaattg ttggcgatgc gactttgcgc gtgaacgagc
     7981 gaggcaacgg cgttaccgtt tggaacgcgc ccggcgcgca ggtcgtcggc aacgatattt
     8041 ccaaaggccg cgacggcatt ttttccaata ccagcacgca caacacctat aaaaacaacc
     8101 gcttcagcga tttgcgtttc gccgtccact atatgtacac caacgacagc gaaatcagcg
     8161 gcaatatttc cgtgggcaac aatatgggct atgtgctgat gttttccgag cggctcaaag
     8221 tgtttgacaa tatcgccgtc ggcagccgcg accaaggcat catgctcaac tatgtcaact
     8281 attccgatat tcacgacaac attatcaaca aagcgggcaa gtgcgttttt gcctacaatg
     8341 ccaactacga taaactgtcc gccaatcatt ttgaaaactg ccaaatcggc atacacttta
     8401 ccgccgccat cgaaggcacg tccctgcacg acaattcctt tatcaacaac gaaagccagg
     8461 tcaaatacgt cagcacgcgc tttctcgact ggagcgaggg cggacacggc aactattgga
     8521 gcgacaacag tgcgttcgat ttgaacggcg acggcttcgg cgacagcgcg taccggccca
     8581 acggcatcat cgaccaaatc atctggcgcg cgcccgtatt gcgcctcttg atgaacagtc
     8641 tcgcaatcag catcgtcaaa tgggcgcagg cgcagtttcc cgccgttctg cccggcggcg
     8701 tggtggacag caaaccgctg atgaagcctt atgtccccaa aattcaaacc cgctatcagg
     8761 caatgaagga cgagttgctc aaagaagccg aaacacggca gtcggaatgg ggcagggcgg
     8821 aaaacggttc tttgaactag tctgcttcag acggcatccg gatccaaatg ccgtctgaaa
     8881 acacaaaagg aacaaccatg accacacatc atgtcgaatt gaggaatgtc accaaacggt
     8941 tcggggcgca aaaagccgtc aaccaagtcg atttggtttt gaaggcagga gaaagcgtcg
     9001 ggcttgccgg atacaacggc gcgggcaagt ccaccattat gaagctgata ctcgggctga
     9061 ttaccccgac cgaaggcgaa gtgatgcttt tgggcgaacg taccggcagc aaagcggggg
     9121 cgcggcttcg cagccaaatc ggctacctgc ccgaaaccgt tgcgctgcac ccttcgctga
     9181 ccggcatcga aacgctggat ttttatgcca aacttaaaaa acagccgctc acgcagaacc
     9241 gggggctgct tgagcgcgtc ggcatttcac aggcggcaca ccgccgcgtc ggcacttatt
     9301 ctaaagggat gcgccaacgc cttgccttgg cacaagccct gctgggcgag cccaaagtcc
     9361 tgctgtttga cgaaccgaca accggcctcg accctgcatc acgacaaatg ttttacgaag
     9421 tcgtgcgcga actcaacggg cgcggcgcga ccgtattgct cagcacccac gcccttgccg
     9481 agttggacgg acacgccgac cgcattatcg tggattaaat t
//
LOCUS       DAXHKG010000076         9418 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.076, whole genome shotgun sequence.
ACCESSION   DAXHKG010000076 DAXHKG010000000
VERSION     DAXHKG010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9418
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.076"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            134..343
                     /locus_tag="ACFMWP_001375"
     CDS             134..343
                     /locus_tag="ACFMWP_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HFC5891965.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            432..1646
                     /locus_tag="ACFMWP_001376"
     CDS             432..1646
                     /locus_tag="ACFMWP_001376"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HFC5891966.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKSYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVSQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="ACFMWP_001377"
     CDS             complement(1733..4312)
                     /gene="clpB"
                     /locus_tag="ACFMWP_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HFC5891967.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSCLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMSIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4573..5583
                     /gene="trpS"
                     /locus_tag="ACFMWP_001378"
     CDS             4573..5583
                     /gene="trpS"
                     /locus_tag="ACFMWP_001378"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HFC5891968.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5589..5930
                     /locus_tag="ACFMWP_001379"
     CDS             5589..5930
                     /locus_tag="ACFMWP_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891969.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6250..6615
                     /locus_tag="ACFMWP_001380"
     CDS             6250..6615
                     /locus_tag="ACFMWP_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891970.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAKEAVTEAKEAVTEAAKDTL
                     NKAADATQEAADKMKDAAK"
     gene            complement(6824..8332)
                     /gene="ppx"
                     /locus_tag="ACFMWP_001381"
     CDS             complement(6824..8332)
                     /gene="ppx"
                     /locus_tag="ACFMWP_001381"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HFC5891971.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEVV"
     gene            complement(8449..9180)
                     /locus_tag="ACFMWP_001382"
     CDS             complement(8449..9180)
                     /locus_tag="ACFMWP_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC5891972.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLHLSLGYKNR
                     SVTRSFGIVPFVGQNLLGGSRYNFVGGFNADFSQHLSERWRLTLNAGNMWKHYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHDLTKEAEQASVRKGLRIGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSFWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNTQIFMSVEKDFK"
BASE COUNT         2174 a         2441 c         2484 g         2319 t
ORIGIN      
        1 tgcggcttcg tcgccttgtc ctgatttttg ttaatccgct atatcgattt gaatttttca
       61 gaaaatgaag cggacgtttg ggcggaggca acttgtttga taagatagca atatttcaaa
      121 acggagaaag atcatgcctt atgtcaatat taaagtaacc ggcggcaagg aagcaccgac
      181 tgccgcgcaa aaagcggaac tgatcggcgg cgtaaccgaa ttgctggcac gcgtgctggg
      241 caaaaatccc gaaacaacgg ttgtcgtgat tgatgaagtg gataccgata actggggaat
      301 aggcggcaaa agcgtcagcg aacggcgcaa agagggcagg taaaaagcct gaaaatctcg
      361 gtttgatgct ttaaattccg cgtgaaaaag agtacattcc cacccattgc ccaaaattta
      421 cggaacacat catggataaa tttcccaagt ctgcaaagct cgatcacgtc tgttacgaca
      481 tacgcgggcc ggttcacaaa aaagcccttc agttggaaga ggagggcaat aaaatcctta
      541 aactcaatat cggcaaccct gcgccgttcg gctttgaagc ccctgatgaa atcttggtcg
      601 atgtcatccg caacctgccg acttcgcaag gctattgcga ttctaaaggg ctgtattccg
      661 cccgcaaagc cattgttcac tactatcaga ccaaaggttt gcgcgatatt acggttgatg
      721 atgtctatat cggcaacggc gtgtccgagc tgattacgat gtctatgcag gcattgctca
      781 acgacggcga cgaaatcctg attcccgcgc ccgactaccc tttgtggacg gcggcggcaa
      841 cgcttgcggg cggtacggta cgccattatc tgtgcgacga agaaaacggc tggttcccca
      901 accttgccga tatggaagcc aaaatcacgc ccaaaaccaa agccatcgtc gtcatcaatc
      961 ccaataatcc gacaggcgcg gtgtacagca gggaaatcct gttggaaatc gccgaactgg
     1021 cgcgcaagca cggtttgatt attttcgccg acgagattta cgataaaatc ctttatgacg
     1081 gcgcggttca ccaccacatc gccgcgcttg cccccgacct tttgacggta acgttcaacg
     1141 gtttgtccaa atcctaccgc gtcgccggct tccgccaagg ctggatggtg ctcaacgggc
     1201 cgaaacatca cgcaaaaggt tacatcgagg gtttggatat gctctcgtct atgcgcctgt
     1261 gtgccaatac gccgatgcag cacgcgattc agacggcatt gggcggctat cagagcatca
     1321 acgaatttat tttgcccggc gggcggcttt tggaacagcg caacagggcg tgggaactgg
     1381 tcagccaaat ccccggcgtg tcctgcgtca aaccgatggg cgcgatgtat atgttcccaa
     1441 aaatcgatac cgaaatgtac cgtatccacg atgacatgaa attcgtttac gatttgctgg
     1501 tgcgcgaaaa agtcttgctg gtacagggaa cggggtttaa ttggattaaa cctgaccatt
     1561 tccgcattgt cacgctgcct tacgtccatc agattgaaga ggcgatgggc aggttggcaa
     1621 gattcctgca aacctaccgc caataagggg acggtttgtc tgccgaggat aaaaaatgcc
     1681 gtctgaaacg gagattcccg tttcagacgg cattttcaac agcaggaacg aatcaggcaa
     1741 atttcagtct gtcgccgtcg gcttctaccc tgatttcgct ttcgggcgca tagtttccgg
     1801 caagcagggc ttttgccagc gggttttcga tttccgactg gatggcgcgt ttgagcggac
     1861 gtgcgccgta aatcgggtcg aaaccggctt tggcgatgat gtccagtgcg gcatcggaaa
     1921 cagtcaggcg caggttttgt ttttccaaac gtttttccaa acctttgagc tggattttcg
     1981 caatgctgcg gatgtttgcc tgatccaaac cgtggaacac gaccacttcg tcgatgcggt
     2041 tgatcatttc aggacggaaa tgttctttca catcctccat cacaacttct tttaccgctt
     2101 cgtaatcctg aatgctcatt tgttggatgt gctggctgcc gatgttggaa gtcatcacaa
     2161 tcacggtatt tttaaaatct accgtcctgc cttgcccgtc ggtcaaacga ccgtcatcca
     2221 atacttgcag caggatgttg aacacatcgg gatgggcttt ttccacttcg tccagcagaa
     2281 tcacgctgta cggtttgcgg cgcacttgtt cggtcaggta gccgccttct tcgtagccga
     2341 catagcccgg aggcgcaccg atcaggcgtg caacggcgtg tttttccata tattcggaca
     2401 tatcgatgcg aatcagatga tcttcgctgt cgaacagaaa gcctgccagg gctttacaca
     2461 actcggtttt acccacgccg gtcgggccca agaacaggaa gctgccgtaa ggcttgttcg
     2521 gatcggcaag accggagcgg ctgcggcgga tagcgtcgga cacggcacgc acggcttcgt
     2581 cctgtccgac cacgcggcgg tgcaatactt cttccatttt cagcagtttg tcgcgttcgc
     2641 cttccatcat tttggatacg ggaatgccgg tcatacggga aaccacctct gcgatttcct
     2701 ctgcgccgac attattacgc aagagtttgt ttgccggttt tgtgctgtcc gtatctgccc
     2761 gttcggcggc tgcacgctgt ttttccaaat gctccaaatc ttcatacatc aattttgaag
     2821 ccagtgccaa atcgccttgc cgttttgcct gttcgatttt aattttgact tcgtcaattt
     2881 gtttcttaat attagcagca ccgtctgaaa ttgctttttc ggctttccag atttcgtcta
     2941 aatcggcgta ttctttttgc agaccgttga tttcctcgtc tatcagttcc aaacgttttt
     3001 tgctggcatc gtctttttct ttttcaacgt gcgccttttc catccgaagc tgaattagac
     3061 ggcggtcgat tttgtccatt gcttccggct tggtttcttt ttccatcttg acacggctgg
     3121 cggcttcgtc aatcaaatca atcgctttat caggcaggaa gcggtcggta atgtagcggt
     3181 cgctcaactc cgctgcggca acgatagcag ggtcggtaat atcgataccg tggtggattt
     3241 cataacgctc ctgtaaaccg cgcaagatag cgatggtgtc ttctacactt ggctcgccaa
     3301 ccaatacttt ttggaagcgg cgttcgagtg ccgcgtcttt ttcgatgtat tggcggtatt
     3361 cgtccaaggt ggtcgcgccg atacagtgca attcgccacg tgccaaagcc ggtttcagca
     3421 tattgcccgc atccatcgca ccgtcggttt tgcctgcgcc gaccaaagta tggatttcgt
     3481 cgatgaaaat cagagtgttg ccgtcgtctt tcgccaagtc gttcaacacg cctttcaagc
     3541 gttcttcaaa ttcgccgcgg tatttcgcgc cggcaatcaa tgccgccaag tccaaaacca
     3601 gtaggcgttt gttgcgcagg gattcgggta cttcgccgtt gacgatgcgt tgtgccaaac
     3661 cttcgacgat ggcggtttta cccacgcccg gttcgccaat cagcacaggg ttgtttttgg
     3721 tacggcgttg caatacctga atcgcacggc ggatttcgtc gtcacggccg ataacggggt
     3781 cgagcttacc gtctcgggcg cgttgggtca gatcgagcgt atattttttc aaagcatcgc
     3841 gttggtcttc ggcattggca tcgttcacgt tttgtcctcc tcgtaccgcg tcaatcgcgg
     3901 cattgatgtt ttgttcggtc gcgccggctt ctttcaaaat tttgccggcc gcatcgttct
     3961 gctgcaccaa ggcaagcagg aaaagttcac tggcgatata ggcatcgccg cgtttggttg
     4021 cggctttgtc catcaggttc aacaccgcct gcaattcgcg gctgggcaga atgtcgccgc
     4081 cctggccgga cactttcggc aggctgttca aatgctgctg caaacgctgt ttcacctgcg
     4141 gcacgttcac gcccgcatga gccaagagcg cggcagcacc gctgttttgg tcgtcaagca
     4201 gggctttcag cacaaagccc gcttccagac agctgccgtc cgcagccaac gccaaactct
     4261 gagcttctgc aagggcctgt tggaatttgg cggttaattt gtcgtatcgc atttttgttt
     4321 ccttttcaaa atgtccgctg tcgaagccta tatgtgcata attgtggata actcaagttc
     4381 tgttttctgt ttttctatat ttaattcgat atatcattga atttaaagta tataaaaatg
     4441 tataataatg tgtataacta tatcttctta atatggaaaa gtctgttgtc ggctggatgt
     4501 aggtggcaaa tcgggtataa tcggcgcatc tttttccctt tcagacggca ttgatgccgc
     4561 aaggacattt ttatgagcaa aaaacgagtt ctgaccggcg taaccaccac cggcatcccg
     4621 catctgggca actacgtcgg tgctatccgc cccgccgtcc gcgcggcgca aaaccctgat
     4681 accgaatcct tcctcttcct cgccgattac cacggtatca tcaaatgcca cgagccggag
     4741 atgattcacc aatccaccca agccgttgcc gccacttggc ttgcctgcgg actcgacccc
     4801 gagcgcacca ccttctaccg ccaaagcgac attcccgaag tgatggaatt gaactggatt
     4861 ctgacctgca tcaccgccaa gggtttgatg aaccgcgccc acgcctacaa agccgccgtg
     4921 caggcaaatg cggaaaacgg gcaggaagac cccgatttcg gcgtggaaat gggtttgttc
     4981 agttatccga ttctgatgac tgccgatatt ctgatgttca acgccaacga agtccccgtc
     5041 gggcgcgacc aaatccaaca cgtcgaaatg gcgcgcgaca tcgccggccg cttcaatcac
     5101 cgcttccgag aactcttcac cctgcccgaa gtgaaaatcg acgaaaacgt cgaactcttg
     5161 gtcggtttgg acggacgcaa aatgtccaaa tcctacggca acaccattcc gctttgggaa
     5221 aacgacaaaa aaacccaaaa atcggtcaac aaaatcatca ccaatatgaa agagccgggc
     5281 gagccgaaac agcccgacga aagcccattg tttgaaatct acaaagcctt ctccacgccg
     5341 tctgaaacgg tggaatttac gaaaatgctt gccgacggcc tggcttgggg cgaggcaaaa
     5401 aaacttttgg cggcgaaaat caacgccgaa ctcgccgaac cgcgcgaacg ctacaacgag
     5461 ctgaccgccg acccttcgca aatcgaagag attttacagg caggtgcgca aaaagcgcgt
     5521 aaagaagcac gcgaattgtt ggacaaagta cgcgatgcgg tcggcatccg cccgttgaaa
     5581 taaacccgat gccgtccgaa cctcttaaag gcttgccgga acaaaacgtc gtccggctga
     5641 ccggcaagca tcccaacgac ttggaagccg tcagcggcaa atgcatggaa accgacgata
     5701 agggcggtcc ggtaggctgg gcggaaaacg gcgtgtgcca taccttgttt gccaaactgg
     5761 tgggcaatat cgccgaagac ggcggcaaac tgacggatta cctgatttcg cattccgccc
     5821 tgcaacccta tcaggcaggc aaaagcggct atgccgccgt gcagaacgga cgctatgtgc
     5881 tggaaatcga cagcgagggg gcgttttatt tccgccgccg ccattattga ggtattcgga
     5941 catcccggaa tatatttggg tttttcaaac cttgcgaaaa aaagtccgca ccgcagggaa
     6001 actcaaaagg agggggatat gtgttacaat tttccgaact gttttcataa aatagttttc
     6061 ggacgtgttt caatatggca ttgatgccgc cttattgttc gagaaaaaaa cctttatatt
     6121 taaatataat gggttttaac taaacgggaa accgttttct ctccggccga tgggcaaaat
     6181 cagccgattg atggaacacg gttcgatttt taagcaaaac cttaatcaac aactcaagaa
     6241 ggataagaca tgaaaaaatt attgattgcc gcaatgatgg cggctgcctt ggcagcttgt
     6301 tcgcaagaag ccaaacagga ggttaaggaa gcggttcaag ccgttgagtc cgatgttaaa
     6361 gacactgcgg cttctgccgc cgagtctgcc gcttctgccg tcgaagaagc gaaagaccaa
     6421 gtcaaagatg ctgcggctga tgcaaaggca agtgccgagg aagctgtaac tgaagccaaa
     6481 gaagctgtaa ctgaagccaa agaagctgta actgaagcca aagaagctgt aactgaagca
     6541 gctaaagata ctttgaacaa agctgccgac gcgactcagg aagcggcaga caaaatgaaa
     6601 gatgccgcca aataatttgt tgccttggca aaaatgatgg gatgccgcct gccggcaacc
     6661 caaacgaaac cgcctgaaga ttttcaggcg gtttttgagt tgtatgcccc ttgtttttta
     6721 cgcctgcatg accgttccga gcagatgtgc cgcgcatatc gggatgttgc ggacaggcaa
     6781 atgccgtctg gacagggttt ggacggcatt tgttccgtaa ggttcagacg acctcgactt
     6841 taaacggcat attgattttt tgccattgga cgctttcata ttccaatgcg tcggcaatca
     6901 ggggatggcg ttccagccat tccctgtcaa tacgcaggat gaagccgcag ctttccgtat
     6961 ccgtgcgcaa ctgcatattt ttcgggaaag acaggtcttg gcgcgaacgg cagaacaggg
     7021 cagcaaggcg cagggacaaa acggcatacc acaacatttc gttggtgccg atgatgccgc
     7081 tcattttttt catatcgccg cgatgaccga tgaccagttg ggcaagtatg gtctgttctt
     7141 tgcgtgagaa acccggcata tcggcgtttt cgaggatgta ggcggaatgc ttgtgatagc
     7201 cggtgtgggc gatgtccaaa ccgatttcgt gcagcgcggc ggcgcgtccg agatactgtt
     7261 gccacaaggc aagctcttga actgtaacgt ttttagcgtg gcagaggctg tccataaagg
     7321 tttgcgcggt ctcggcggtg cgtttcgcct gattgaggct gacgtggtag cggtgttgga
     7381 actcggcaac cgtttgtccg cgcatatctt cgtttaaacc gcgcccgatc aaatcgtaaa
     7441 acacgccgtc gcgcagggcg gcttcggtta cggtcatcct gtcgagtttc atttcctcaa
     7501 acgccgccat catcacggca agtccgccgg caaaaacttc gatgcgttcc ggtttcaggt
     7561 tttcaaattt ggcttttttg accgaaccgg cttcgatgat gcgttcggcg agggcgcgca
     7621 tgcctttgta ggtaatgtcc gcctcttggg gcatttcggc ggcaagcacg tcgcggatgg
     7681 attttgccga acccgatgtg ccgacggcga aatcccaacc ttcgcgcctc atatttttgc
     7741 tgatgcgctg gatttcgttg cgggcggcgg aaatggcaga ttggaagtct ttggcggtga
     7801 ttttgttttg gaagaagcgc aggctgtagg ttacgcagcc caagggcagg ctttcagtaa
     7861 tgtcgggatt cagcgtcgag ccgatgacaa attctgtcga accgccgccg atgtcgataa
     7921 ccagcatttt gccgccgccc ggggggaggg tgtggatcac gccggtataa atcagccgcg
     7981 cctcttcgcg cccggcgatg atttcgatgg ggaaacccag tgccgcttcg gctttgggaa
     8041 ggaaatctgc gatgtttttg gcgacgcgga atgtattggt tgccacggcg cgtacctgtt
     8101 cagggcggaa gccgcgcagg cgttcgccga attttgccag acagtccaaa gcctgttctt
     8161 gggaagcggc actcaggttt ttctgttcgt ccagtccggc ggcgaagcgc accatctgtt
     8221 tgaacgaatc gatgactttt aattgtccgt tgttgttttc gcaaatctgg aggcggaaac
     8281 tgttggaacc caaatcgacg gaggcgagga tgtttgcggg ggtggtggtc atggcggata
     8341 tcggtggggg aaaaacgcaa tgttactctg acggcgcagg cgttgacaat aaatgatgcg
     8401 gcggtttttg attctgtcca cggatgttgc cgacggcatt ttttgcgctt atttgaaatc
     8461 cttttccacg ctcatgaaaa tctgcgtgtt tttgcgtgtg taaaaacttt tcatattgct
     8521 gtcgattttc agatagcgga aattgagttg cggcgtaaag cccttccaag agattttgtc
     8581 gtgccaaaac gacaggtttg cctgatattc gtggtctttg cgcgggaagc ggtacacaat
     8641 ggtcccgggc gcgtcaaacg tcctgcgtgt atagcgcagg tttgcccgca gacccaagcc
     8701 gccgtcgaac gttttgaccg cgccgatacg caaacccttg cggacggaag cctgttccgc
     8761 ctccttcgtc aagtcgtgcg accagtccgc cccgccgtaa agcagccagt ctttcggcgc
     8821 ggaatacatc agcgtcgcgc ccgccagcgg catatggctg tcgtatcggg cggcggtgcg
     8881 gtcttcctga taatgcttcc acatattgcc cgcgtttagt gtcaaccgcc agcgttcgct
     8941 caagtgttgg gagaaatcgg cattaaagcc gccgacgaaa ttgtatcggc tgccgcctaa
     9001 gaggttttgc ccgacaaacg gcacgatgcc gaacgagcgc gttaccgaac gatttttata
     9061 gccgagcgac aggtgcaggc actgttcgct gaaatctttg ttatcccaat aatgcacgcc
     9121 gccgccgctg atgccgccgt agaggaaatg atgcccgccc gcattgattt cgcgcgacac
     9181 gcctaagccc tagcgcaaac cgtgtgcctt ttgcggcagg ctgtcggcgg ttttcgtcca
     9241 gcttctgccc gcaaattcaa tcgttttttt ggacgaagcg ttgtttatag cggattaaca
     9301 aaaatcagga caaggcgacg aagcctcaga cagtacagat agtacggaac cgattcactc
     9361 ggtgcttcag caccttagag aatcgttctc ttcgagctaa ggcgagacaa cgccgtac
//
LOCUS       DAXHKG010000077         9325 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.077, whole genome shotgun sequence.
ACCESSION   DAXHKG010000077 DAXHKG010000000
VERSION     DAXHKG010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9325
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.077"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            168..1511
                     /locus_tag="ACFMWP_001383"
     CDS             168..1511
                     /locus_tag="ACFMWP_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HFC5891973.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     DRYAPDALAKLSGKEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTGRVVALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LLGWVAPQPDKYSITRTTLGHFLKNKLFKFNTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1514..2746
                     /locus_tag="ACFMWP_001384"
     CDS             1514..2746
                     /locus_tag="ACFMWP_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HFC5891974.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYTLAD
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2739..3515
                     /locus_tag="ACFMWP_001385"
     CDS             2739..3515
                     /locus_tag="ACFMWP_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HFC5891975.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3515..4141
                     /locus_tag="ACFMWP_001386"
     CDS             3515..4141
                     /locus_tag="ACFMWP_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HFC5891976.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4145..4738
                     /gene="nqrE"
                     /locus_tag="ACFMWP_001387"
     CDS             4145..4738
                     /gene="nqrE"
                     /locus_tag="ACFMWP_001387"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HFC5891977.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4752..5969
                     /gene="nqrF"
                     /locus_tag="ACFMWP_001388"
     CDS             4752..5969
                     /gene="nqrF"
                     /locus_tag="ACFMWP_001388"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HFC5891978.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPEEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6121..7176
                     /locus_tag="ACFMWP_001389"
     CDS             6121..7176
                     /locus_tag="ACFMWP_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC5891979.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKSGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     TGGYRTAMSSEFEKLLR"
     gene            7202..7417
                     /gene="nqrM"
                     /locus_tag="ACFMWP_001390"
     CDS             7202..7417
                     /gene="nqrM"
                     /locus_tag="ACFMWP_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HFC5891980.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRTIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7541..8119)
                     /gene="grpE"
                     /locus_tag="ACFMWP_001391"
     CDS             complement(7541..8119)
                     /gene="grpE"
                     /locus_tag="ACFMWP_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HFC5891981.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            8303..9121
                     /gene="cysE"
                     /locus_tag="ACFMWP_001392"
     CDS             8303..9121
                     /gene="cysE"
                     /locus_tag="ACFMWP_001392"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HFC5891982.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
BASE COUNT         2252 a         2624 c         2314 g         2135 t
ORIGIN      
        1 taaaaacggc ttccgcaagg aaaaaagcag caaatctgac aaacaggtac aattcctgat
       61 agaatctaac actttgctac attaatttat tcaatgcttt tgatgccacg cgacacggta
      121 tcaaaacacg ccgtttttac cttaaccatc acaagtaatg caaatatatg attaaaatca
      181 aaaaaggtct aaacctgccc atcgcgggca gaccggagca agtcatttat gacggcccgg
      241 ccattaccga agtcgcgttg cttggcgaag aatatgccgg tatgcgcccc tcgatgaaag
      301 tcaaggaagg cgatgccgtc aaaaaaggcc aagtgctgtt tgaagacaaa aagaatccgg
      361 gcgtggtgtt taccgcgccg gcttcaggca aaatcgccgc catccatcgc ggcgaaaagc
      421 gcgtacttca gtcggtcgtg attgccgttg aaggcaacga cgaaatcgaa ttcgaccgct
      481 acgcgcccga tgccttggca aaattgagcg gcaaagaagt gcgccgcaat ctgattcaat
      541 ccggtttgtg gactgcgctg cgtacccgtc cgttcagcaa aatccctgcc gtcgatgccg
      601 agccgttcgc catcttcgtc aatgcgatgg acaccaatcc gctggcggca gaccctgtgg
      661 ttgtgatcaa agaagccgcc gaggatttca gacgaggttt gctggtattg agccgtttga
      721 ccgagcgtaa aatccatgtg tgtaaagcag caggcgcaga cgtgccgtct gaaaacgccg
      781 ccaacatcga aacacatgaa ttcggcggcc cgcatccggc cggtttgagt ggcacgcaca
      841 ttcatttcat tgagccggtc ggtgcaaaca aaaccgtttg gaccatcaat tatcaagatg
      901 taattgccat cggacgtttg tttgcaacag gccgtctgaa caccgggcgc gtggttgcct
      961 tgggtggttc tcaagtcaac aaaccacgcc tcttgcgtac cgttttgggt gcgaaagtat
     1021 cgcaaattac tgcgggcgaa ttggttgacg cagacaaccg cgtgatttcc ggttcggtat
     1081 tgaacggcgc gattgcacaa ggcgcgcacg attatttggg acgctaccac aatcagattt
     1141 ccgttatcga agaaggccgc agcaaagagc tgctcggctg ggttgcgccg cagccggaca
     1201 aatactccat cacgcgtaca accctcggcc atttcctgaa aaacaaactc ttcaagttca
     1261 acacagccgt caacggcggc gaccgcgcca tggtgccgat tggtacttac gagcgcgtga
     1321 tgcccttgga tatcctgccc accctgcttt tgcgcgattt aatcgtcggc gataccgaca
     1381 gcgcgcaggc attgggttgc ttggaattgg acgaagaaga cctcgctttg tgcagcttcg
     1441 tctgcccggg caaatacgaa tacggcccgc tgttgcgcaa agtgctggaa accattgaga
     1501 aggaaggctg attatgggct tgaaacattt tctggaaaaa atcgaaccgc acttcctgcc
     1561 gggcggcaaa catgaaaaat ggtatgccct ctacgaagcg gcggcgacga ttttctacac
     1621 atccggtgcg gtaacgcgca aagcggcaca cgtccgcgac gcgctcgact ccaagcgcat
     1681 gatgattttg gtgtggctgg ctttgttccc cgccatgttt tacggcatgt acaacgtcgg
     1741 cgcacaggca ttcggtgcct taacgcccga tttgctgcaa caaagcatcg ccaacgactg
     1801 gcattacacc cttgccgacg ctttgggcat caatatgtcg tctgaagcgg gcgtgttggg
     1861 caaaatgctg ttcggcgcga tttacttcct gccgatttac gcgaccgtat ttgccgtcgg
     1921 cggtttctgg gaagtcttgt tcgccaccgt acgcaaacac gaaatcaacg aaggtttctt
     1981 tgttacctcg attctgtttg ccttaatcgt tccgcccacg ctgccgctgt ggcaggcggc
     2041 tttgggtatt tctttcggcg ttgtggttgc gaaagaagta ttcggcggta cgggtaaaaa
     2101 ctttatgaac cctgcgctgg caggccgcgc cttcctgttc ttcgcctacc ccgccaactt
     2161 gagcggcgat gcggtttgga cggcggttga cggctattcc ggcgcaaccg cgctggcgca
     2221 atgggcggca cacggtgcag acggcctgaa aaacgccgta accggtcaaa ccatcacttg
     2281 gatggacgcg tttatcggca aactgcccgg ctccatcggc gaagtctcca ctttggcact
     2341 cttaatcggc ggcgcgttta tcgtgtttgc ccgcatcgct tcttggcgca ttattgccgg
     2401 cgtgatgatc ggtatgattg cgatgtcttc gctgttcaac ttcatcggtt cggacaccaa
     2461 cgctatgttt gccatgcctt ggtactggca tttggtcgtc ggcggcttcg ccatcggtat
     2521 gctgtttatg gcgaccgacc ctgtttccgc ttcctttacc aatgtcggca aatggtggta
     2581 cggcgcgctg atcggcgtga tgtgcgtgtt gatccgcgtg gtcaatccgg cttaccccga
     2641 aggtatgatg ttggcgattc tgtttgccaa cctgtttgcc ccgattttcg actatttcgt
     2701 cgcacaagcg aacatcaaac gcagaaaggc gcgcagcaat ggctaagaaa ttcgataaag
     2761 acagcttcag cggcacgctg attgtcgtgt tggcggtcag cctgatttgc tcggtcatcg
     2821 ttgccggtgc ggtcgtcggc ttgaaaccca tccaagagaa acaaaaactc caagacaaac
     2881 aaggctatat cttgagcgta gccggtttga tggataagga caccgacatc ggcaaaacct
     2941 ttgccgagcg tatcgagcaa cgtgttgtcg atttggcgac cggcgaatac gtcgccgatg
     3001 cgcctaaaga cttcagcgcg cgcatcgcag gcaaagaccc tgcccaaagc atccgcatca
     3061 aacccgaaga cgatttggca ggcatcaaaa gccgtgccaa atacaccgag gtttatttgg
     3121 taaaaggcga agacggcaaa atcgggcaaa tcatcctgcc tatgcacggt aacggtttgt
     3181 ggtcggtcat gtacggcttt gtcgccatcc agcccgacgg caacaccatc aacggcatta
     3241 cctactacga acaaggcgaa accccgggct tgggcggcga aatcggcaat ccgttgtggc
     3301 agcaaaaatt cgtcggcaaa aaactgtttg acggacaagg caaactcgcc ctgcacgtcg
     3361 gcaaaggcgc gggttcggac aaagaacacg gcgtagatgc cctctccggc gcatcgctga
     3421 catccaaagg cgtgcaaggt tcgttcgcct actggttcgg cgaaaacggc tatatcccct
     3481 acctgaacaa attgaaatca gcaggagcgc aataatggct gatatgaaac gcttgaaaca
     3541 tttgatgttt tcacccttta tcgacaacaa cccgattgcc ttgcaggttt tgggtatttg
     3601 ttcggctttg gcggttacca ccaaacttca gacggccatc gtgatgggta tttccgtagc
     3661 tttggtaacc ggtttttcca gcttcttcat ttcgctggta cgcaactaca tccccaacag
     3721 catccgtatt atcgtgcaaa tggcgattat cgcgtcgctg gttacgctgg tcgaccaact
     3781 cttgcaggca tttgcctacg aattgtccaa acagctttcc gtattcgtcg gtctgattat
     3841 taccaactgt atcgtgatgg gccgcgccga agcatttgcg atgaaagagc cgccgctgga
     3901 aagcctgatc gacggcatcg gcaacggcgc gggctacggg ataatgctgc ttgtcgtcgc
     3961 caccgtccgc gaactgattg gctcgggcaa actcttgggc tacaccgttt tccaaaccgt
     4021 gcaggacggc ggctggtatc agaccaacgg cttgttcctg ctcgccccca gcgcgttctt
     4081 catcatcggc tttttgattt ggggactgcg tacctggaaa cccgaacagg cggaggaata
     4141 agctatggaa cactatttga gcctcttcat caaatccgtc ttcattgaaa atatggcact
     4201 atccttcttt ttgggtatgt gcacgttttt ggcggtatcc aaaaaagtat ccaccgcatt
     4261 cggtttgggt gtggcggtaa ttttcgtact cgggctgtcc gtccctgtca accaactcgt
     4321 ttactcgctg ctcaaagacg gcgcgattgt cgaaggcgtg gatttgacct ttttgaaatt
     4381 catcaccttc atcggcgtga ttgccgcttt ggtgcagatt ttggaaatgt tcttggataa
     4441 attcgtcccc gccctctata acgcattggg catctacctg ccgctgatta ccgtgaactg
     4501 cgcgattttc ggcgccgtat cgtttatggc gcaacgcgaa tacaacttcg gcgagtccgt
     4561 tgtatacggc ttcggcgcgg gcttgggctg gatgttggcg attgtcgctt tggcgggcat
     4621 taccgaaaaa atgaaatatt cggacgctcc caaaggcctc aaaggcttgg gcattacctt
     4681 tatcgccgcc ggcctgatgg cgatggcgtt tatgtcgttc tctggcatcc agttataaga
     4741 aagggatcgg tatggagatt attttaggta tcgtgatgtt taccgtcatc gttttggttt
     4801 tggcactgat gattctgttt gccaaatcca aactggtcag cgaaggcgac atcaccatca
     4861 aagtcaacgg cgaaaaagag ctgacgatgc ccgccggcgg caaactcttg ggcgcgcttg
     4921 ccaacgaagg catctttatc ccctccgcct gcggcggggg cggttcgtgc ggacaatgcc
     4981 gcgtcgtcgt aaaaagcggc ggcggcgaca tcctgccgac cgagctgtcc cacatcagca
     5041 aacgcgaagc acgcgaaggc tgccgtctgt cgtgccaagt caacgtcaaa accgacatgg
     5101 acatcgaagt ccccgaagaa gtgttcggcg tgaaaaaatg ggaatgcacc gtcatctcca
     5161 acgataacaa agccacgttc attaaagaac tcaagcttgc cattcccgaa ggcgaagaag
     5221 tccccttccg cgccggcggc tacattcaaa ttgaagcccc gccgcacacc gttgcctaca
     5281 aagacttcga cattcccgag gaataccacg aagactggga caaatacaat ttgtggcaat
     5341 acgtttccaa agtggacgag ccgattttgc gtgcctactc tatggcttcg tatcctgaag
     5401 aaaaaggcat cattatgctg aacgtgcgta tcgccacgcc gcccccgcgc gtacctgatg
     5461 cgcctccggg acaaatgtcg tcctacatct ggtcgctcaa acccggcgac aaagttacga
     5521 tttccggccc gttcggcgaa tttttcgcca aagacaccga tgccgaaatg gtatttatcg
     5581 gcggcggtgc gggtatggct ccgatgcgtt cccacatttt cgaccagttg aaacgtttga
     5641 actccaaacg taagattacc ttctggtacg gcgcacgttc caaacgcgaa atgttctatg
     5701 tcgaagactt cgaccaactc gcagcagaat tcccgaactt cacatggcac gtcgccctgt
     5761 ccgacccatt gcctgaagac aactgggacg gctacacagg cttcattcac aacgtggttt
     5821 acgaaaacca tctgaaaaac cacgaagcgc cggaagactg cgaattttat atgtgtggtc
     5881 ctccgatcat gaaccagtcc gtcatcaaaa tgcttaaaga cttaggcgtg gaagacgaaa
     5941 acatcctctt ggacgatttc ggcggttaaa tattcggctt caaacacaaa aggaagaaac
     6001 ctcggtttct tcctttttct atccgatgcc gcccgaaccc ccttcagacg gcatcggcat
     6061 agaaacatat cggccgtttt gcgatataat tcaaaccatt tgccaaaacc gtcaaacact
     6121 atgccgtctg aaacacgcct gccgaacttt atccgcgtct tgatatttgc cctgggtttc
     6181 atcttcctga acgcctgttc ggaacaaacc gcgcaaaccg ttaccctgca aggcgaaacg
     6241 atgggcacga cctataccgt caaatacctt tcaaataatc gggacaaact cccctcacct
     6301 gccgaaatac aaaagcgcat cgatgacgcg cttaaagaag tcaaccggca gatgtccacc
     6361 tatcagcccg actccgaaat cagccggttc aaccaacaca cagccggcaa gcccctccgc
     6421 atttcaagcg acttcgcaca cgttactgcc gaagccgtcc gcctgaaccg cctgacacac
     6481 ggcgcgctgg acgtaaccgt cggccccttg gtcaaccttt ggggattcgg ccccgacaaa
     6541 tccgttaccc gtgaaccgtc gccggaacaa atcaaacaag cagcatctta tacgggcata
     6601 gacaaaatca ttttgaaaca aggcaaagat tacgcttcct tgagcaaaac ccaccccaag
     6661 gcctatttgg atttatcttc gattgccaaa ggcttcggcg ttgataaagt tgcgggcgaa
     6721 ctggaaaaat acggcattca aaattatctg gtcgaaatcg gcggcgagtt gcacggtaaa
     6781 ggcaaaaacg cgcgcggcga accttggcgc atcggcatcg aacagcccaa catcgtccaa
     6841 ggcggcaata cgcagattat cgtcccgctg aacaaccgtt cgcttgccac ttccggcgat
     6901 taccgtattt tccacgtcga taaaagcggc aaacgcctct cccatatcat taatccgaac
     6961 aacaaacgac ccatcagcca caacctcgcc tccatcagcg tggtcgcaga cagtgcgatg
     7021 acggcggacg gcttgtccac aggattattc gtattgggcg aaaccgaagc cttaaagctg
     7081 gcagagcgcg aaaaactcgc tgttttcctg attgtcaggg atacaggcgg ctaccgcacc
     7141 gccatgtctt ccgaatttga aaaactgctc cgctaaacat acaaaccgat taggaaacac
     7201 catgaaaacc ctgctcctca ccttcggcat cttcctgacc gtcatcatcg gtatggcggt
     7261 cggctatatc ttctccaaac gcaccatcaa aggcagttgc ggcggcatta ccgccttggg
     7321 tatgaaaaaa atgtgcgact gcgacacgcc ttgcgacacc ctgcaaaaga aactggatga
     7381 agaaaaacag gcaggcggca tacgggttga ccgttaacac cgaaacaaaa tgccgtctga
     7441 agcccgacag gcgggttcag acggcattgc cgctttactt cgatcggttt atacgcaaaa
     7501 cgcgcttcag gaaataaatc agattattcc ccagacgcct tcaggcttcc ttctgtgcca
     7561 ccgtaaccat agccgggcgc aacacgcggt cggacagcgt ataacccttc ttcatcacgc
     7621 ccaccacggt attgggttcc tgttcgcttg ccaccgcctg catcgcctga tggatattcg
     7681 gatcgagctt atcgcccgct ttaggattga tttccttgat ttgcgtagca tcaaatgctt
     7741 tctgcaactc gttcaaagtc atctgcacgc ccattttcag cgcatcgaaa ttgccgctct
     7801 gatccaaaag cgccatttcc agataatcct tgaccggcag catttccacg gcaaacttct
     7861 gtccggcgaa cttgtgcgta tccgcaattt cctgctggtg gcggcggcgc aggttttgct
     7921 cgtttgccaa agcgcgcagc tgctcgtctt tcaactgcgc ttccagctcg gcaatccgcg
     7981 cctgcaaatc ctcataagcc ggctctgcgg cagcctgttc ctgcacaccg tccgcatttc
     8041 ctactgtctc gacggtttcc accgcctcca cattttcaac cgcttcttca ctgttttgct
     8101 gctgtgtctg ttcgctcata tcgtatccct taaaacaaat tggaaatcaa aatccagtta
     8161 ttacccgcgc aagataagga cattttcaag aaacttcaag caaaagcaga gaatttcaaa
     8221 ttcattttca aatcccctac cgaaaaaata atatagacgg taagatactg ccgaccatat
     8281 cgattttcaa acgtcatcac tcatgaaaaa agaccattta aacacaaccg gtttcgacct
     8341 ctggcacacc atccgcgaag aaaccgcggc cgcggtctcc gccgaaccga tgctggcaag
     8401 ttttttgcac caaaccgtgt tgcgccacga gtccctcggc tccgtccttg cctaccacct
     8461 ttccagcaaa ctcggcagcc cgattatgga cgtgcgcgcg ctgtttgaaa tctaccagca
     8521 ggcgttgggc agcgacaccc aaatcggcaa atgcgtcgaa gcagacttaa aagccatcta
     8581 cgaacgcgat cccgcctgcg acgaatattc gctgccgctt ttatatttca aaggcttcca
     8641 cgcgattcag gcacaccgca tcaaccatcg gctgtatctc gacgggcgca aaacgctggc
     8701 gtatttcctg caaaaccgta tgtccgaagt attcggcgtg gacatccatc ccgccgcccg
     8761 tttcggatac gggctgatgc tcgaccacgc caccggcttt gttgccggcg aaaccgccgt
     8821 gttgggcaac aatatttcga ttttgcacgg cgtaacgctc ggcggttcgg gcaaagaagg
     8881 cggcgaccgc caccctaaaa tcggcgacgg cgtgatgatc ggcgcaaacg cctcgatatt
     8941 gggcaatatc cgcatcggca gcaatgccaa aatcggggcg ggcagcgtcg tggtttcaga
     9001 cgtgccgccg tccatcacgg ttgtcggcgt acccgccaaa cccgtggcgc gatcgctcaa
     9061 aacaccgtcg gcggatatgg atcaaaatat ccagtttacc gaaatcgact ttatgatttg
     9121 aatatccgca ccaatgccgt ctgaaacgcc aaacgggctt cagacgacat tgcccgcttc
     9181 aagcctgcgc cttgatatgc cgccgatgtc ggcacttgcc agtcggacaa aatgcctttt
     9241 attcaataca cccgattccc acgcaaccgg aaatatagtg gattaacaaa aatcaggaca
     9301 aggcgacgaa gccgcagaca gtacg
//
LOCUS       DAXHKG010000078         9310 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.078, whole genome shotgun sequence.
ACCESSION   DAXHKG010000078 DAXHKG010000000
VERSION     DAXHKG010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.078"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(120..1037)
                     /gene="thrB"
                     /locus_tag="ACFMWP_001393"
     CDS             complement(120..1037)
                     /gene="thrB"
                     /locus_tag="ACFMWP_001393"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HFC5891983.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLVAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(1074..1802)
                     /gene="ubiG"
                     /locus_tag="ACFMWP_001394"
     CDS             complement(1074..1802)
                     /gene="ubiG"
                     /locus_tag="ACFMWP_001394"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HFC5891984.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1954..3195
                     /locus_tag="ACFMWP_001395"
     CDS             1954..3195
                     /locus_tag="ACFMWP_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HFC5891985.1"
                     /translation="MPTKTPSLFGCAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGNALGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKMPVLFDTQAPAGTGYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWMGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3253..4308
                     /locus_tag="ACFMWP_001396"
     CDS             3253..4308
                     /locus_tag="ACFMWP_001396"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5891986.1"
                     /translation="MELKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFD
                     HGIPEYAMIEPHLVDQHRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICG
                     GTHLGYLHHMAQKPNLLDRLAIRRNRSNYATAKLIMAHSHMMRRELVGLYGVPPERIQ
                     VAPPPADTERFFPQPGETADLRAKYGFADHETVFLFPSTGHTRKGLELLADFFEHTGL
                     PVKLAVVGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESVLCGT
                     RVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALNYN
                     PSLSHHIDRLTDILASV"
     gene            complement(4375..6027)
                     /locus_tag="ACFMWP_001397"
     CDS             complement(4375..6027)
                     /locus_tag="ACFMWP_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HFC5891987.1"
                     /translation="MVAYVFLFLFVTAALVLIIRSHYRWTYFFASALFVFLAGGMLML
                     TAQWQRALNFASVWFVVLILFHRLKIHYYKQPLLISDFLLIADWRNWETLFHYKEAVI
                     GMAGLLALAAYAVFGWSGADSLGVPWRWAGAALFAAAFVSMWYFSKHPGAVKTWLDSL
                     PDDGRDVFLNLPMSCRAVFFQVPVFEGDGEAFAKQMPSETQPCGMSDEKPDIVVTLME
                     STLDPHCFDFAAAKIPDLKMFGRQEDTVFSSPLRVHTFGGATWKSEFAFLAGVPSTDF
                     GALASGVFYSVVPHLQTGLVRNLREHGYFCVALSPFTKGNYNAKAAYDHFGFNLMFQP
                     QDLGYPAPMGKNLWHISSEEMMQYARMILEKRHPDLENVRQPMFVYVLTMKEHGPYRT
                     DTDNVFDLDAPDLNAKTVSALNDYIGRIADLDKAVESFDRYLHERGKPFVFGYFGDHQ
                     VPFEGVSVRKKWDYAQPDYVTQFAVRSNIAGGFVQRQDFLDLAFAGGVLMEAAGLEAK
                     DGFMRANMAMRGLCGGGLEDCPNRKLVGDYRNYLYDVLKIAS"
     gene            6197..6448
                     /locus_tag="ACFMWP_001398"
     CDS             6197..6448
                     /locus_tag="ACFMWP_001398"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891988.1"
                     /translation="MNYKIYDGAKIIKKENLSIGDYSQIDDFVFFNCGEKSILGSFVH
                     ISSFTSIIGGGEFYMDHFSGLSAGCRIITGSDDFMGGGG"
     gene            6517..6768
                     /locus_tag="ACFMWP_001399"
     CDS             6517..6768
                     /locus_tag="ACFMWP_001399"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891989.1"
                     /translation="MLGTNVTVLPGVTIGDGVAVGAGAIVRKNLEPWTIYVGVDCKPL
                     KRRSQDKILELEKHLVAEFNLDLCPIIPSPNLPKPKETR"
     gene            6765..7328
                     /gene="gmhB"
                     /locus_tag="ACFMWP_001400"
     CDS             6765..7328
                     /gene="gmhB"
                     /locus_tag="ACFMWP_001400"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HFC5891990.1"
                     /translation="MKLIILDRDGVINQDRDNFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            7358..8101
                     /locus_tag="ACFMWP_001401"
     CDS             7358..8101
                     /locus_tag="ACFMWP_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC5891991.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            8098..8790
                     /locus_tag="ACFMWP_001402"
     CDS             8098..8790
                     /locus_tag="ACFMWP_001402"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC5891992.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPEHIWFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPAPSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTRRFAPYTPEAKQW
                     LKIHGRELFALG"
     gene            8901..9086
                     /locus_tag="ACFMWP_001403"
     CDS             8901..9086
                     /locus_tag="ACFMWP_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891993.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRPSETRNP
                     PGPTCGMKRLSWREVFY"
BASE COUNT         2331 a         2873 c         2169 g         1937 t
ORIGIN      
        1 ttgttaatcc actataaaat ggaaaatacc cggctatcgt ctcattttcg ttttaatcag
       61 ccataaaaat gccgtctgaa accctttcag acggcatttc tgtcaaacgc cggacgcact
      121 caatccaaac tcaacagcag gttgcggaac gcgttcgggt ctttgataaa cgtcatctcg
      181 cccgcctgcg gaaaatgaaa atccaacagg cgcgacaccc aaaaacggat gcagccggcg
      241 cgttgggcgg tcggaaaata cgccttttct tcggcactca aggggcgcac gccctcataa
      301 ccgccgataa acgccttttt caacgcctca tccaacttat tgtccgccgt ccttgcccaa
      361 tcgttgaccg caatcgccaa gtcatacata aaattgcccc ggcaggcata ataaaaatcg
      421 ataaagcccg acacctgacc gccgtcaagc aacacattgt ctttaaacaa atcggcgtgg
      481 atgatgcccg aaggcagatg attgccgaga ttgtccttca gcgcatcgat ttcggaacac
      541 agcagcgcag catcgtcttg cgacaggacg ggcagcagcc gggcgcacgc ctccgtccac
      601 cacgcatcgt aacgcgggtt ttccatttcc aaagggaaat cggcggcgac aaggtgcatt
      661 ttggccaaca tcgcaccggt atggaaacac tgctccgccg tcggcagcgc agtatccgaa
      721 cctttcaggc aggcaaccaa gcaggcgggc ttgcccgcca aaacggaatc aagccggccg
      781 tctttgcgcg caaccggcgc ggcaaccgcc acgcccttca tactcaaatg ccggttaagc
      841 tccagaaaaa acggcagctc ttcctgtttc aacacttcaa acacggtcag cacataacgt
      901 cccgaagtcg tcgtcagaaa ataattgctg ttggtaatcc cctgcgcgat gccctgcagg
      961 gaaacaaatt cccccaaatc gtaaccgctc aggaagccgc gcatttcatc atcggaaaca
     1021 ctggtataga cagacatatc aactcacttg ctcaaaaacg ggcaaacccg ccgtcagaac
     1081 gccggacggc aggcaaacat ataattcaca tcggtcgaat cgcacagggc ataagtttgc
     1141 gacaacacat ggtaagtcat acccttcgta tccgccacat ccaagcctgc ctgacggcac
     1201 attcgcgcca gctcggcagg tgcgatgaat tttttccagt cgtgcgtgcc tttggggaca
     1261 aacttcaaca gatattccgc cgccacaatc agatgcaggt acgatttcgg gtttttattg
     1321 atggtagaaa aaaacaccat gccgtccggt ttgaccagat tggcacaagc acgcacgatg
     1381 gcggcgggat cggggacgtg ttccatcatt tccatgcacg ttaccacatc gaacgagtgc
     1441 ggttccgcct cggcaaggtc ttccacgcgg atacattcgt attcgatatc ggcgacattg
     1501 ttcaaagccg cgtgcaggcg ggcggtttcc agcgactgct ccgccatgtc gatacccttt
     1561 acaaacgccg cgccgcgccg cgccatgctt tccgccagga tgccgccgcc gcagcccaca
     1621 tccaaaaccc gtttgccgca caaatccgcg tgtccgtcga tataatccag ccgcagcgga
     1681 ttgatgtcgt gcaaggtttt gaactcgccc gacttgtccc accatttgtc ggcaatccgg
     1741 ctgaatttgg cgatttcccc ctcatcgaca ttatattttt tgtcggacat tttccctccc
     1801 atctgacgaa ccgcccactc caaaacccaa gattatacta tggaacgcaa tgccgtctga
     1861 aagccttttc gggcggcgcg gcgcaaatac cttacaaatc cttacacttt acggcataat
     1921 ggcggctcgc tttttctggc agaaagacaa aatatgccca ccaaaacccc ttcactgttc
     1981 ggctgcgcga tgattatcgc cggcacggtc atcggcgcag gtatgctcgc caacccgacc
     2041 gccacatccg gcgtatggtt taccggctcg ctggccgtgt tgctgtacac ctggttttcc
     2101 atgctctcca gcggcctgat gattttggaa gtcaacaccc actaccccca cggcgcgagc
     2161 ttcgacacca tggttaaaga cctgctcgga cgcggctgga acatcatcaa cggtatcgcc
     2221 gtcgccttcg ttttatacct gcttacttac gcttatatct tcgtcggcgg cgacctgacc
     2281 gccaaaggca tcggcaacgc cttgggcggc aatgtttcgc ttaccgtcgg acaactcgtc
     2341 ttcttcggca tcctcgcctt ttgcgtatgg gcatccgcac gcttggtcga ccgattcacc
     2401 agcgtcctca tcggcggcat ggtattaacc tttatttggg caaccggcgg cctgattgcc
     2461 gatgccaaaa tgcctgtttt gtttgacacc caagcccctg ccggcaccgg ctactggatt
     2521 tacgccgcca ccgccctgcc cgtctgcctc gcttccttcg gcttccacgg caacgtttcc
     2581 agcctgctca aatactttaa aggcgacgcg cccaaagtgg ctaaatccat ctggatgggc
     2641 acactgattg cgctggtaat ttacgtcctc tggcaaaccg ccatccaagg caacctgccg
     2701 cgcaacgagt tcgcccccgt gattgccgcc gaagggcaag tctccgtcct catcgaaacc
     2761 ctgtccaaat tcgcccaaac cggcaatatg gacaaaatat tgtccctgtt ttcctatatg
     2821 gcgatcgcca cctcgttttt aggcgtaacg ctcggactct tcgactacat cgcagacatc
     2881 ttcaaatgga acgacagcgt gtccggccgc accaaaaccg ccgcgctgac cttcctgccg
     2941 cccctgattt cctgcctgct cttccccacc ggcttcgtta ccgccatcgg ctacgtcggc
     3001 ctggcggcaa ccgtctggac aggcatcatc cccgccatgc tgctctaccg ttcgcgcaaa
     3061 aaattcggcg caggcaaaac ctataaagtt tacggcggct tgtggctgat ggtttgggtc
     3121 ttccttttcg gcatcgtcaa catcgccgca caggtattga gccaaatgga actcgtcccc
     3181 gtatttaaag gataaaggca aaatgccgtc tgaagccctg ttcagacagc cttacgacat
     3241 tcggaaaatc atatggaact caaaatagac attgcaacca acaacttcaa acacggcggc
     3301 ggcacggaac gctacacatt ggatttggta aagggtctga acagacaaaa catcacaccg
     3361 gccgtttatg cgacgaaatt tgatcacggc attcctgaat acgccatgat cgaaccccat
     3421 cttgtcgatc aacaccggac gctgaaaaaa ctacgctcat tcctcttttc aagtcggctc
     3481 gctcaaacca gaaaaaacag tgccgccaaa ctgattgcct gccaccacgc cgattacgcc
     3541 gacctcctca tctgcggcgg cacacacttg ggctacctgc accatatggc gcaaaaaccg
     3601 aacctgctcg accgtctcgc catacgccgc aaccgcagca actacgccac cgccaaactg
     3661 attatggcgc attcccatat gatgcggcgc gaactggtcg gactgtacgg cgttccccct
     3721 gaaagaatcc aagtcgcccc cccccccgca gatacggaac gcttctttcc acaacccgga
     3781 gaaactgccg acctgcgcgc caaatacggc tttgccgacc atgaaaccgt tttcctgttc
     3841 ccatcgaccg gccacacgcg caaaggtctg gaactgcttg ccgacttttt cgaacatacc
     3901 ggcctgcccg tcaagcttgc cgttgtcggc tccccgctcc cccgccctat gaaaaacgtc
     3961 gtcggactgg gcttctgcac cgatatgccc gaactctacc gcgccgccga ctttaccatt
     4021 atggcctccc tgtatgaacc cttcgggctg gtcggtgtcg aatccgtcct atgcggcaca
     4081 cgcgtcgtcc tctccgaaaa catggcatgt acagaggtca tgaacgaaga agccggattc
     4141 tttttctcac gccaaaaccc ggaaaccctg gcgcaagccg ttgcccaagc cgtcagcctt
     4201 aaaaaacagg gcggacaccg cctgtccgac ccgatgcgtg cactgaacta caacccgtcc
     4261 ctgtcgcacc acatcgaccg actgaccgac atactggcat ccgtataaca aaatgccgtc
     4321 tgaacgagtt ttcagacggc atttttgcaa ccgttgcagc cgtgcggcaa aaagctaact
     4381 ggcaattttc aaaacgtcgt acagatagtt ccgatagtct ccgaccagtt tccggttcgg
     4441 gcagtcttcc aaccctccgc cgcacaaacc gcgcatcgcc atattcgcac gcatgaagcc
     4501 gtctttggct tccagaccag ccgcctccat cagcacgccg cctgcaaagg caaggtcgag
     4561 gaaatcctgc cgctgtacga atccgccggc aatattgctc ctgacggcaa actgcgttac
     4621 ataatccggc tgcgcgtaat cccatttctt cctgacggac acgccctcaa acggtacctg
     4681 atgatcgccg aaataaccga aaacaaaggg tttgccgcgt tcgtgcagat aacggtcgaa
     4741 actttccacc gctttgtcca aatcggcaat gcgcccgatg tagtcgttaa gcgcggatac
     4801 ggttttcgca ttcaaatcag gtgcatccaa atcaaacaca ttgtcggtat ccgtccgata
     4861 cggcccgtgc tccttcatgg tcagcacata tacgaacatc ggctgccgca cgttttccaa
     4921 atcgggatgg cgtttttcca aaatcatccg cgcatactgc atcatttcct cactggaaat
     4981 atgccacagg tttttgccca tcggcgcggg atagcccaaa tcttgcggct ggaacatcag
     5041 attaaagccg aaatggtcat atgctgcctt ggcattgtag ttgcccttgg taaacggcga
     5101 gagtgccacg caaaaataac cgtgttcgcg caggttgcgg accaaaccgg tctgcaaatg
     5161 cggcacgacc gagtaaaaca cgccacttgc caacgcgccg aaatccgtgg acggaacacc
     5221 cgccaaaaac gcaaattcgg acttccacgt tgcgccgccg aaagtatgca cgcgcaaagg
     5281 tgaggaaaat acggtatctt cctgccgccc gaacattttc aaatcgggaa tcttggcggc
     5341 agcaaagtcg aaacagtgcg gatcgagcgt cgattccatc agggtaacga caatatcggg
     5401 tttttcatcc gacatgccgc acggctgggt ttcagacggc atctgtttag caaacgcttc
     5461 cccgtcgccc tcgaacacgg gtacttggaa aaacaccgcc cgacaggaca tcggcaggtt
     5521 caaaaacacg tcgcgcccgt cgtccggcag cgagtccagc cacgtcttta ccgcgcccgg
     5581 atgtttggaa aaataccaca tcgacacgaa cgccgccgca aacaacgccg cgcccgccca
     5641 ccgccacggc acacccaaag aatccgcacc gctccagccg aaaaccgcat atgccgccaa
     5701 agccagcagc cccgccatac cgataaccgc ttccttataa tgaaacagcg tttcccaatt
     5761 ccgccagtcg gcaatcagca aaaagtcgga aatcaacagc ggctgtttgt aataatggat
     5821 tttcagcctg tggaacagta tcagcaccac aaaccagacc gaagcgaaat tcaaggcgcg
     5881 ctgccactga gccgtcaaca tcagcatacc gcccgccaaa aagacaaaca gcgcggatgc
     5941 gaaaaaatac gtccagcggt agtgcgacct gataatcagc accaacgccg ccgttacaaa
     6001 caaaaatagg aaaacatagg caaccatccc gtcccactcc tcaaaacggc atacctgagc
     6061 cgttgcgaat tattatcgaa agtgtgcatt ataatgcagc acaggcgcat cactgccgat
     6121 atttcagtat aattattcga gatggaatca ctgaaaatgg tgaagttaca atgagccctt
     6181 ttagaggaac taaaaagtga attataaaat atacgatggt gcaaagatta ttaaaaaaga
     6241 aaatttatca attggggatt attctcaaat tgatgatttt gtatttttta attgtggaga
     6301 gaaaagtatt ttaggaagtt ttgttcatat atcatcattt accagtatta ttggtggtgg
     6361 agaattttat atggatcatt tttcaggatt aagcgcaggg tgtagaatta ttaccggtag
     6421 cgatgatttt atgggggggg ggggttaacc aatccaacag tcccatctaa atatactaat
     6481 gttaaaaaat ctagtgttag aattggaaaa catgcaattt taggaacaaa tgtaacagta
     6541 ttaccaggcg ttactattgg tgatggggtt gctgttggag caggggctat agtgagaaaa
     6601 aatcttgagc cgtggactat ttatgtcggg gtagattgta aaccactgaa gcgcagatca
     6661 caagataaaa tattggagtt agagaaacat cttgtagcag aatttaatct agatttatgt
     6721 cctataatcc catccccgaa cctgcccaaa ccaaaggaaa cgcgatgaaa ctcatcattc
     6781 tcgaccgcga cggcgtcatc aatcaggacc gcgacaactt cgtcaaatcc gttgacgagt
     6841 ggatacctgt cgaaggcagc atggatgcgg tggcatttct gacgcaggca ggctacaccg
     6901 tcgccgttgc caccaaccaa tccggcatcg ggcgcaaata ttttaccgtt caaaacctta
     6961 ccgaaatgca cgccaaaatg caccgcctcg tccgtcaggc aggcggcgaa atcaacggca
     7021 tctggttctg cccgcacacc gatgccgaca actgcaactg ccgcaagccc aaaccgggta
     7081 tgattgaaga catcatcgga cgcttcaacg cccaagcctc ggaaacctgg ctggtcggcg
     7141 acagcctgcg cgatttgcag gcaatcgatg ccgtcggcgg aaaacccgcg ctggttctga
     7201 ccggaaaagg caaaaaaacg ctctcccaac acggacacga attacccgaa cacacacagg
     7261 ttttcgatac cttgctcgat ttctcacaat acatcatgca ggaaaacgcc gcaccgcaag
     7321 ccgactgaac ataccgcatt tccgacaagg caaaaccatg ctcatcatcc gcaacctgat
     7381 ttactggctg atactctgtt ccaccctgat tttcctcttt ccctttatgc tgctcgcctc
     7441 gcctttccgg gacggggcgc acaagatggc gcgggtctgg gtcaaaatcc tcaacctctc
     7501 gctcaaacac atcgtcgggc tcaaataccg catcatcggc gcggaaaaca tccccgaccg
     7561 ccccgccgtc atctgcgcca aacaccaaag cggctgggaa acgctcgccc ttcaggacat
     7621 ttttccgccg caggtttacg ttgccaaacg cgagttgttc aaaatcccct ttttcggctg
     7681 gggcttgaaa ctggtcaaaa ccataggcat agaccgcaac aaccgccgcg aagccaacga
     7741 gcagctcata aaacaggggt tggcgcgcaa aaacgaaggc tattggatta ccattttccc
     7801 cgaaggcacg cgccttgcgc ccggaaaacg cggcaaatac aaactcggcg gcgcgcgcat
     7861 ggcgaaaatg tttgagatgg acatcgtccc cgtcgccctc aacagcggcg aattttggcc
     7921 gaaaaactcc tttctgaaat atccggggga aatcaccgtc gtcatctgtc cgaccatccc
     7981 gcacgcaagc ggcagcgaag ccgaattgat ggaaaaatgc gaacatctca tcgaaacgca
     8041 acaaccgctt atttccggcg caggcccgtt tgccgccaaa atgccgtctg aaaccgcatg
     8101 accgcctttg tccacaccct ttcagacggc atggaactga ccgtcgaaat caagcgccgt
     8161 gccaagaaaa acctgattat ccgccccgcc ggcacacata ccgtccgcat cagcgtccca
     8221 ccctgcttct ccgtctccgc tctaaaccgc tggctgtatg aaaacgaagc cgtcctgcgg
     8281 caaacactgg cgaaaacacc gccgccgcaa actgccgaaa accggctgcc cgaacatatc
     8341 tggttccacg gcagacagct tgccctcacc gcccatcaag acacgcaaat cctgctgatg
     8401 ccgtctgaaa tccgtgttcc cgaaggcgca cccgaaaaac agcttgcgct gctgcgggac
     8461 tttttggaac ggcaggcgca cagttacctg attccccgcc tcgaacgcca cgcccgcacc
     8521 acacaactgt tccccgcccc ctcctcgctg acctctgcca aaaccttctg gggcgtgtgc
     8581 cgcaaaacca caggcatacg cttcaactgg cggctagtcg gcgcaccgga atacgttgcc
     8641 gactatgtct gcatacacga actctgccac ctcgcccacg ccgaccacag ccgcgcgttc
     8701 tgggcactga cccgccgctt cgcaccctac acgcccgaag cgaaacagtg gctcaaaatc
     8761 cacggcaggg aacttttcgc cttaggctga cgcggcccgg gcaggcatcc gccaattcag
     8821 acctcctccc aaacggacat ccggaaagca gcatcacagc cggcgacaca taccgctgcc
     8881 gccgctttca gacggcatcc gtgccggaac aggcacgcgc ccgcccgatt caaaccgcga
     8941 tgacgctttg ccgccggttc ggggcaggat ggcggcacac acgccgtctg ccgcgtttca
     9001 tttcacaccg cccttccgaa acccgaaacc cgcccggtcc gacgtgcggt atgaaacgct
     9061 taagctggcg cgaagtcttt tactgatttg cccgcgaaaa tgccgtctga aaggttttcg
     9121 gacggcattt ttttgcgttt cccaggatgg cggcggattc gtaaaaggcg gtcagggtgg
     9181 attgtaggat gggttgagac ctgccgaatc cgccgcatct gccaaatcta ccgccgtcat
     9241 tcctacgaaa gtgggaatct agaacgcggg gttaagaaaa cctgcatccc gtcattccca
     9301 cgaaagtggg
//
LOCUS       DAXHKG010000079         9300 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.079, whole genome shotgun sequence.
ACCESSION   DAXHKG010000079 DAXHKG010000000
VERSION     DAXHKG010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9300
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.079"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            39..644
                     /locus_tag="ACFMWP_001404"
     CDS             39..644
                     /locus_tag="ACFMWP_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HFC5891994.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QLSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            707..1069
                     /gene="ssrA"
                     /locus_tag="ACFMWP_001405"
     tmRNA           707..1069
                     /gene="ssrA"
                     /locus_tag="ACFMWP_001405"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(1386..1571)
                     /locus_tag="ACFMWP_001406"
                     /pseudo
     CDS             complement(1386..1571)
                     /locus_tag="ACFMWP_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(1587..2186)
                     /locus_tag="ACFMWP_001407"
                     /pseudo
     CDS             complement(1587..2186)
                     /locus_tag="ACFMWP_001407"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(2140..2550)
                     /locus_tag="ACFMWP_001408"
     CDS             complement(2140..2550)
                     /locus_tag="ACFMWP_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HFC5891995.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            complement(2547..2878)
                     /locus_tag="ACFMWP_001409"
                     /pseudo
     CDS             complement(2547..2878)
                     /locus_tag="ACFMWP_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239053.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2987..3490)
                     /locus_tag="ACFMWP_001410"
     CDS             complement(2987..3490)
                     /locus_tag="ACFMWP_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HFC5891996.1"
                     /translation="MSDEFNRFIERVLSHEGGYVNHPQDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAISIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            complement(3580..4062)
                     /locus_tag="ACFMWP_001411"
     CDS             complement(3580..4062)
                     /locus_tag="ACFMWP_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891997.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNLIKSRKEEFKKLMEKKKPKI
                     "
     gene            complement(4059..4970)
                     /locus_tag="ACFMWP_001412"
     CDS             complement(4059..4970)
                     /locus_tag="ACFMWP_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891998.1"
                     /translation="MFDLEVALRRVLSAAPTVQDTQIEQYNQLTQIMHRTLDPKDVKG
                     NSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPPSGYSFLRKEAFLYIVGHHV
                     IFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFKAVGNCDKLSLIQQHGVKSI
                     LLDVSAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSDEELEAQSEIHINLEVLLNG
                     NSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVIQPSDVKLSKSVRIGRYDEA
                     NSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            complement(5260..5505)
                     /locus_tag="ACFMWP_001413"
     CDS             complement(5260..5505)
                     /locus_tag="ACFMWP_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5891999.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            complement(5534..5911)
                     /locus_tag="ACFMWP_001414"
     CDS             complement(5534..5911)
                     /locus_tag="ACFMWP_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC5892000.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            6082..6204
                     /locus_tag="ACFMWP_001415"
     CDS             6082..6204
                     /locus_tag="ACFMWP_001415"
                     /inference="COORDINATES: protein motif:HMM:TIGR04111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892001.1"
                     /translation="MAQWARENGFKPRDVYLVVGGQRKGNYGKGHEIAKKLGLK"
     gene            6216..6506
                     /locus_tag="ACFMWP_001416"
     CDS             6216..6506
                     /locus_tag="ACFMWP_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC5892002.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAKIGKRVDVD"
     gene            6551..7426
                     /locus_tag="ACFMWP_001417"
     CDS             6551..7426
                     /locus_tag="ACFMWP_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HFC5892003.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELTEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHEISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            7419..7763
                     /locus_tag="ACFMWP_001418"
                     /pseudo
     CDS             7419..7763
                     /locus_tag="ACFMWP_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            7738..8373
                     /locus_tag="ACFMWP_001419"
     CDS             7738..8373
                     /locus_tag="ACFMWP_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HFC5892004.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAKTPQNKKPPEKNSDGILPKTLAIKPKRY"
     gene            8443..8646
                     /locus_tag="ACFMWP_001420"
     CDS             8443..8646
                     /locus_tag="ACFMWP_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892005.1"
                     /translation="MNIIEQEMKHSSLRKVDAEIAKIIADAHKINAESVKIAQESRWY
                     PMIAATGLVTAIAAVLALIFKFA"
     gene            8683..8964
                     /locus_tag="ACFMWP_001421"
     CDS             8683..8964
                     /locus_tag="ACFMWP_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892006.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            8976..9188
                     /locus_tag="ACFMWP_001422"
     CDS             8976..9188
                     /locus_tag="ACFMWP_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC5892007.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
BASE COUNT         2552 a         2369 c         2137 g         2242 t
ORIGIN      
        1 cgcccgaaac agccatcgga caaataacag gaaaaaatat gaataccgac ttccaaaaca
       61 tcctcaaaca actgggcaaa caagcccaaa aagaagcggc agaaaaacag gcagccgaaa
      121 aaaacaagca aaaacaagaa caggatttcg atttttcaca agcagtcgga caactctccc
      181 cattaaaaaa ccggcagcaa tattatgcgc cgcccgacaa aacccccatc aaagtccgtc
      241 ccaaagacaa ccgcgccgac gaagaaaact acttctacat cggcagcaca tacaacgacc
      301 cgcccgccag cttcagcaaa aacggacagg gaaaaaacga catccaacgc ctgaaaaacg
      361 gatactatcc cgtcgttacc gatgtcgacc tgcacggcta cacacaggaa gaagcccaaa
      421 aagtcctcaa cgaattcatc gcattcaccc aaaaacgcgg cgtatgcggc gaaatcatcc
      481 acggcagcgg attaggttcc aaaggctaca aacccgttct gaaaaatatg acccgaaact
      541 ggctgatgca acaccccgac gtactcgcct acgccgaacc ccgggaaggc aacgacggct
      601 gcgtccgcat cctgctcaaa cgcaaattaa ggcagcaaga ctgacaaatt tctccgacag
      661 acttggcagc accgcacaat atccgtataa tttgcaaacc atttttgggg gcgaccttgg
      721 tttcgacggg ggttgcgaag cagatgcggg cataccgggg tctcagattc ccgtaaaaca
      781 ctgaattcaa atagtcgcaa acgacgaaac ttacgcttta gccgcttaag gctagccgtt
      841 gcagcagtcg gtcaatgggc tgtgtggcga aagccaccgc aacgtcatct tacattgact
      901 ggtttcctac cgggttactt ggcaggaaat aagacttaag gtaactggtt tccaaaaggc
      961 ctgttggtcg gcatgatgga aataagattt tcaaatagac acaactaagt atgtagaacg
     1021 ctttgtagag gactttcgga cgggggttcg attccccccg cctccaccat accctatttt
     1081 cagcagcatc ctgcaacaca aaaaagcctt gaacttcaac agtttcaagg cttttttgtg
     1141 ttgcaggatg ctggcgtatg cttgagtttt cgccatttat ggggtaactt ttggggtaac
     1201 ttttcacgaa ttaccccaaa aaacgcctta aaaatgcaaa agtcatcacg cattttttta
     1261 aaaaggttac ccaaaactta aatgtaatcc tttatttata agcttgcagc tttccaaaca
     1321 agttaccccc aaacggataa aaaaatgccg aagccgaact gaccccaaaa agtcggacag
     1381 tttaatcaag cggctttcag ggactgaatt ctgtactgaa caaggctcag cccttttaat
     1441 ttcaacttga ttctatcgtt gttgtatagt ggattaaatt taaaccagta cggcgttgcc
     1501 tcgccttgcc gtactatttg tactgtctgc ggcttcatcg ccttgtcctg atttaaattt
     1561 aatccactat aaaaaaacat ctgatattgc caaccttgat ccgaatgcag tatcggcttt
     1621 tcagacgatc ccggtttctc cggcgcacct ttcagtatct cgccggccaa atcgaaagtc
     1681 gggcggattt gaatacggta actgacgatt tccccgttaa acaaatccat aatcggagaa
     1741 aggtatatct tttctccgcc tacattgaac tcggtaacgt ccgttaccca tttctcattc
     1801 ggcttttctg catggaaaca gcgtcgcagg atattcggcg caattttgcc gacttctcct
     1861 ttgaacgagc ggtatttgcg ccgccgtatc actgccttca gccccgtctt cgccatcaga
     1921 cggctgactt tcttgtgatt gaccggtgtt cctgcgtgac ggatggctgc cgcaatcctc
     1981 cggtagccgt atcttccctt atgtcgtcga taaatatcat ggatatgccg tttcaaatcg
     2041 gcatatttgt cttctgccga ttggacggcc aattggtaat agaaggtgcc gcgtggcagt
     2101 ccgacaatct ccaacagcag ttcaacggat ggcattgcct taaccctgcg acgagttgcg
     2161 ttctttctgc cgcacttctt tcccatggat taaggcatcg ggctttttta gggcagccat
     2221 ttccgctgta aggcaagcca attccgcaag cagttcttcc ttggttttca gatagccggc
     2281 ttttttcgtt tgcggcggat actgtttttt cacgggcttt cttccttgtt tttgggaaaa
     2341 gtcgtaccac cgctgccttt cgtcctgcgc ttttttaagc tgcaaggcat attgttccgc
     2401 cgcaaccata gaagaatgcc gataggtggc aatcagggcg gtttgttccg cttcggcctt
     2461 gtcggcggcg tatcggtaac cgcacgtcca cacaagcaaa agcacaaatg cccaaagcag
     2521 ccgttttttg gctcggacaa attcaatcat tgccgccccc cttcctgatt tgcggatttt
     2581 ttgacttccg ccaactgcgg tacggcggcg atgccgcgtt tgattaatgc atacccgccg
     2641 accatcgcgc cgtatgccca ccaaagccat tcgggcgcgt ccgccgcctg cacgaacttc
     2701 caagtcatgg cggctgcggc gacgtttgcc caaagtttgg tatggctgat tttccctgtg
     2761 gccggattag agaccaagcc gcccagccat cggaaaaagg cggttatttg tgacgctttt
     2821 tttggctgcg cgtttcgcgg cggctacccc gctcttgcgg tgggcttgcg tccaacatcc
     2881 ctgagtcggc atggcgtagc gaatgcctag gtcgctgtgg ctgaaatcgg gctgcatggc
     2941 tgcggccatc agggcgagaa tggacttttt tgacatggtt tgctcctcaa tcggcattgt
     3001 ctgcggcggc gtgaatcagg ttttgcgcca cacggcgtac ccagcccttg ccgaaagagg
     3061 tgaacgtacc cagcttggta taaaagacca gacgctcggc gttgaaccgc aataaaaggt
     3121 cgttttcggg aagggaattg atggctttga ggctgatttc gccgatgatt ccatcgtccg
     3181 gcacgcctgc ggcgcgttgg agcatacggg cggcattgcc gtaaccgtgg ttgacgcagg
     3241 catcaaaaaa ttggaacgcg accgcttccg gcatttggtc ggcgcggtaa cgctcccaaa
     3301 acgctttacg gtaaatgctg attgcctgtt cacgcgtcat ggcacgcatg gagccgttgt
     3361 agccgtttgc ctgggcggtg cgcttagtga tgccccaatt ggtttcgccg ccggggtctt
     3421 gagggtggtt gacgtaaccg ccctcgtggg agaggactcg ttcgataaat cggttgaatt
     3481 cgtctgacat ggaaaaatcc ctgtattgaa ttaaaaatca atacagggat tttagaaaag
     3541 gtcgtctgaa tgggatttta aagggggtta aaactcgttc tagattttgg gtttcttctt
     3601 ttccattaat tttttaaact cttcttttcg gcttttaatt aaattcccag gtaagaatac
     3661 agaataaaaa atggaaatac aggctaaaaa taaatagctc cgttcaagcc aaaaaatggc
     3721 tggtccattt ttgtattctt ctttatgagc caacaagatg acaataaaaa cacaaactaa
     3781 tacggcaaga tatgtgtaaa aaagtaagga atgttttata taccgttgtt cttgtacgcc
     3841 ttcacgaatt tgaatttgtc gccaatttgc atcttcatca aacctcatat cactaaacaa
     3901 tgtcataatg gcaattaaaa aaccggctaa gattgcaaat acgttaataa ttaaatcaac
     3961 ggccttctcg ttcccatgaa caaaaggttg ccctttccat gctaaaaatg ctgatataca
     4021 agcaatcaac aaaaaacgta gtaagggcag atattttttc attgttcagt taagtttctg
     4081 ctttggagtt ctaggaaata ttcactgatt gctgtaaatg ccgagtcagg gagtaacgag
     4141 ttggcttcat cgtatcgtcc tattctaaca gatttagaca gttttacatc agagggctga
     4201 atcacttcac cttgttgcgt ggtaatggaa aatccttgat taaccgtttc atcatcaata
     4261 atttcctctg cctgctcctg catcagcgat tgcgcttcaa tactggctct cgaattaccg
     4321 tttagcaaga cttctaaatt gatatgaatt tcggattgtg cttccaattc ctcatcactc
     4381 aattcgcttg taaatacact accaactttc cctaatgctt tagcaatggt tgaacggcta
     4441 tcttgataca gtctgtttct ggataattga tatgccgaaa catctaaaag aatacttttt
     4501 accccatgtt gttgtatcaa tgacaacttg tcgcaattac ctactgcttt gaattcaata
     4561 ttaaattgaa caatatccgg attgttctct ctcaatttat tgctaagtaa acttaaataa
     4621 gaagcaaccg ttgatgctga caaaaaacca tgtccgcaaa aaattacatg gtgtccaaca
     4681 atatacaaaa aagcctcttt acgcaaaaag gaatatccac ttggaggagc ttgtgttcca
     4741 ccatgatcat cttgctgtac aggtctattg ctcatagtgc ggatatgttc atcttttgta
     4801 ccgctgccaa tgtgtatcag taatccacca attgaattgc cttttacatc tttaggatcc
     4861 aaagttctat gcatgatttg ggtaagctga ttgtattgtt caatttgtgt atcttgaaca
     4921 gtaggagcag ctgacaaaac ccttcttaat gctacctcta aatcgaacaa gctatggttt
     4981 tgctgcgcac gtaaataatg aatagtttta gtagtttttt tgccatttgt acagtccttt
     5041 ctcttttaat atctgtgtcg aaaaaataaa ttcagacggc atcaattcaa atctttcaac
     5101 acctgaacca cctgcccgat gacctgtatg tcggggtagt ttttaatgcg ttttaaaatg
     5161 cacggccgct tcaattgctt aatatccgtt tcagaacacc ggagcagccc gactgtcgga
     5221 gtgtcctaaa tgccgtctga aaatttcaga cggcattttt tatttttcaa atagctcttt
     5281 gccgattgct tggtaatcta cttctttttc agttggattt accgtgtctg cataggcttc
     5341 taccaaagaa aacacaccag cttggcttag ataatgcact tttaccgcct tagctaatgc
     5401 cgaagccaaa ggttcgggaa tttcgatatt gttctgggtg gctgcctctt taacgatttc
     5461 ttccgctcgc tcaccccatt tgatttgttg ttcaaagtca aacataagac tgtctccatt
     5521 ttggatttaa aaatcacgct gttttatgcg tggctgaaac ttgagtattt tcggctgctt
     5581 ttttctctgc gccttttgcc acactgagaa tgacaaattt gccgttatcg ctggcttggc
     5641 ggtaataccc taataactct gactcttcct tactaatttc agaattttca gacggcctaa
     5701 ttccctgttc agcagcaaat aagctgctca catctattcc catattcaaa aaagagagca
     5761 atacatctcc actaggcata aatacgccac gttcgtattt gccccatgtt tcgcgctcaa
     5821 tacctgcttt ttcagcagct tgtgcttggg taagccctaa aaactttctt ttttctttca
     5881 aacgattacc aaaaagagat ttagaaatca caaaataatc cttgcaaaag agattttaaa
     5941 atctcataat tcacgcattg gtaatgcact aattaatttc tagtgcataa atagttcact
     6001 attttatcac aatgggaaag ggctatctat ggctatactg ttgaaaaact aaaagaaaat
     6061 tttgcccaaa acggccaaac gctggcgcag tgggcaagag agaacggctt taagccgcgc
     6121 gatgtgtatc tggtggtcgg cggacagcgc aaaggcaatt acggcaaggg gcatgaaatt
     6181 gccaagaagc tgggactgaa ataaggagga tgcggatggc agaaagtaaa agggtacaac
     6241 ggctattgag ggtctttatc gcgcttgacg agcatccgat tatcggtctg agcaataagg
     6301 atttatcggt cggactgggg ctgacgccat cgcaagtcag cagggatatt gatgatttgg
     6361 ttgcctcggg attggtcatc aaacttgaaa acggcaacta cgcctacggc atcaaaaccc
     6421 tgcaaatcgc agagcggttc aggcagcagc atgaacggct gcaaagcaag attgccaaaa
     6481 tcggcaagcg ggtcgatgtg gattaacgga ttttgaaagt ttccgacgtc ggaaactttg
     6541 gagataaaaa atgaatacag aaattgaaat tatcgcaacc gacaaagtaa gcaatcaggc
     6601 agcgatgcgc agtgtgctgg tgatggagca gtggggtaac ggcgagactt atagcgaaga
     6661 gcgttgggtt gaacgcggtc gtcaagcagt acggcagacg atggaaggca tgttcgaact
     6721 gggacgtgcg ctgattattt taaaagagca tacggaacac ggacggttta tggaaattgt
     6781 gaaaagccaa tttgggctgg gtatcgcaga aacatcacgt ctgatgtcag ccactcgccg
     6841 ctttgcgacc ccgcaaatgc agaaagccgc gccgaagctg atggatttgg gcaagtcaaa
     6901 gctgctggaa ctcttggtcg aagaagacgt tacgttggtg ggacttgccg aaggagaaga
     6961 agtcaacggc atgacctttg acgatgtgga ccgaatgacg gtgcgcgagc tgcgcgtcgc
     7021 cctgcgcgaa agccgtgaaa acctcgccgc caaagacgaa gtgatgaaaa ccaaaacagc
     7081 caaaattgat gagctgaccg agaagctggc taagaagcaa accgttgtca gagagccgaa
     7141 ggcggaagac gtgggcagtg agttggcgat gcagttaaca agccttgagg tcggtatccg
     7201 cagtcaagtg agccgtttga aagatttgtt cgaccaactt aatgcgcaca gtgaggcaca
     7261 cgagatcagc catcaggcaa agatggtcgg cacgctcaat caaattattt tggactgcga
     7321 gcaactgcgc gaaagctatg ccctgccgac tgaagcaccg acagacaatg tgccggaatg
     7381 gttgggcggt gaaacgggag aaggcgatga atccggcaat gattgagcgt cttaaggcag
     7441 tcgagaatca ggcggaagca atgggacgcg gcgcacgctc tgcatatctt aagcagcagg
     7501 cgcaggaatt gggcatcagc cttgccacgc tataccgcaa gctggaggcg gtcagcatca
     7561 agccgacgcg caaacggcgc agcgatgcgg gcaagacgga gcttaaaccg gaagaagcca
     7621 aattgatttc ggcggttttg gtggaggcga tgaggcgcaa cggcaagcgg ttgatgtcgg
     7681 tgcggcaggc ggtggaaatg ctgcgcgcca acggaaaaat cgaggcggcg cggattgatg
     7741 gggaaaccgg ggaagtcatc ccgtccgtcc gcactgcttt ccgcccgctg gcaagacatc
     7801 gacctcaccg cccggttatg gcacatcccc gccgccgaca tgaagaccaa acaccccttt
     7861 accgtcccac tgtcggactg ggcggtagaa atactccgag agctgcacac acagaccggc
     7921 gacaacatcc accttttccc aggcatccgc ccacggcgca aacccgcccc ccatcccgac
     7981 cacatcagca tcaaattcgc ccacaacgcc atccgacgac tgggctatga cggcagcacc
     8041 cccggcaaat ccaaacacac aatgcacgga ttccgccacc tcttcaccaa catcagcctg
     8101 accgccggaa aagacaccct cacaacagac ctcgccctcg gccacatcag ccgcgccgcc
     8161 ctccaacgcg ccggcttctc aagcctgcac cactacctga ccgccgacag ctaccgcctc
     8221 caagagcggc gcgaactcgc cgaatggtac agccgccgcc accgccaagc atacgaagcc
     8281 gccgccaaaa ccccgcaaaa caaaaaaccg cctgaaaaaa attcagacgg catcctgccc
     8341 aaaacacttg caataaaacc taaaaggtat taatgtacac acatggcaga catcctgcca
     8401 tccgacaagc agcggcaacc gccaaaaacg aaaggaaatc caatgaacat aatcgaacaa
     8461 gaaatgaaac actccagtct gagaaaagta gatgccgaaa tcgccaaaat cattgcagac
     8521 gcgcacaaaa tcaacgccga atccgtaaaa atagcccaag agtcccgctg gtatcccatg
     8581 atagcggcca ccgggctggt taccgccatc gccgccgtgt tggcactgat attcaaattt
     8641 gcctgaccac aagccccgcg aggggcttta tccctcaaca aaatgaacag agccgcacta
     8701 ttcaaccgct accccgaatg gattatcggg caagacggcg caagccgttt cattacccat
     8761 tgccgctatc cccgcctgat tgccaaaatc cacaggcaga cagacggcga atgcccgggc
     8821 gggcattacc gccattccga aaacggcatc accctttacg attttatttt tttcgacggc
     8881 aaaccggcag acgaagcccg atttgccgcc gtccttaccg aaacctgccg cagggcagtc
     8941 aaaaaaatat gcgaaacaaa ataaaccgca acgacatgga actcggctac acgccttaca
     9001 accttcgcac ccttcgcaac cgctgcaaac tgacacaggc cgagttggcg caaatcgtcg
     9061 gggtgaagca ctacatacag gtaggccgct gggaagccga acccgatacc gaaacccgtc
     9121 gggccgatat gccgctggaa aaatggcggc agttcctcga ttggatagaa aaaacaaacg
     9181 ccgtctgaaa ccttcagagt gcgaagcctg cccgccgggt acggcatttt ttacccaccc
     9241 ccaaacctaa aagccccacg ccgcttgccc ccgacccgcc gccgccccaa aataaactca
//
LOCUS       DAXHKG010000080         9048 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.080, whole genome shotgun sequence.
ACCESSION   DAXHKG010000080 DAXHKG010000000
VERSION     DAXHKG010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9048
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.080"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..105
                     /locus_tag="ACFMWP_001423"
     CDS             <1..105
                     /locus_tag="ACFMWP_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HFC5892008.1"
                     /translation="WRNGWLSSEEIRNLAKPMCKNEYGRYLLRLVGKD"
     gene            160..699
                     /gene="rfbC"
                     /locus_tag="ACFMWP_001424"
     CDS             160..699
                     /gene="rfbC"
                     /locus_tag="ACFMWP_001424"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC5892009.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            861..2909
                     /locus_tag="ACFMWP_001425"
     CDS             861..2909
                     /locus_tag="ACFMWP_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HFC5892010.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     VQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAEAPSRLEHILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGNSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYH
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQY
                     ADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK
                     "
     gene            3046..4305
                     /locus_tag="ACFMWP_001426"
     CDS             3046..4305
                     /locus_tag="ACFMWP_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HFC5892011.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            4672..6078
                     /locus_tag="ACFMWP_001427"
     CDS             4672..6078
                     /locus_tag="ACFMWP_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC5892012.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYTEAAFVLG
                     DHLLQNGHPEQALPWLEAAAAQRHPKALFTLLQQREHNGTPTGQLLNEYAWLSEQGHL
                     EAQLILMRYHTQRNDPQSLYWAELAAAQYAAPAYYHLARHHQRQGDVATAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEQAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKDHPEALKIMGD
                     LYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAETQAHAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAIGNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            6296..7510
                     /gene="gltS"
                     /locus_tag="ACFMWP_001428"
     CDS             6296..7510
                     /gene="gltS"
                     /locus_tag="ACFMWP_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HFC5892013.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            7609..8625
                     /locus_tag="ACFMWP_001429"
     CDS             7609..8625
                     /locus_tag="ACFMWP_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC5892014.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSAALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            8636..8833
                     /locus_tag="ACFMWP_001430"
     CDS             8636..8833
                     /locus_tag="ACFMWP_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892015.1"
                     /translation="MTTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            8851..9000
                     /locus_tag="ACFMWP_001431"
     CDS             8851..9000
                     /locus_tag="ACFMWP_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892016.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFLCVSYADVPTHRTIQKAS
                     PYVPS"
BASE COUNT         2330 a         2522 c         2113 g         2083 t
ORIGIN      
        1 tggcgtaatg gctggttgag cagcgaagaa atcagaaact tggcaaagcc aatgtgtaaa
       61 aatgaatatg gccgctattt attgcgcttg gttggcaaag attaagaggt tgcttttacc
      121 agttttcagg ccgtctgaaa cgctttttag gaaaacatga tgaatatcat cgatacccgc
      181 attcccgatg tcaaattgct cgaacccaaa gtcttcggtg acgagcgtgg tttttttatg
      241 gaaaccttcc gtgatgaatg gttccgccaa aatgtagccg agcgcacttt cgtgcaggaa
      301 aaccacagca aatccaccca aggcgtatta cgcggtttac attatcaaac cgaaaataca
      361 caaggcaaac tggtgcgcgt ggtatcaggc gaagtctttg atgttgccgt ggatatgcgt
      421 cgtgatagtc ctactttcgg ccactgggtc ggtgaggttt tatcggcaga caacaaacgc
      481 caattatggg tgccggaagg gtttgcccat ggattttatg tgttgagcga tgaagcggaa
      541 ttcgtctaca aatgcaccga ctattacaac ccgaatgcgg aacattccct aatttggaat
      601 gatgccacag tgggaatcga ctggccttta ttgggagaac caagcctatc ggccaaggat
      661 ttggcaggca agatgcttgc tgaagcggcc acattttaat tttcactttt aggtcatcgt
      721 gggtaatttg tagcaagatg acctaatttt taccagctag cctactaact aaatttctac
      781 tatatttaaa tagtcagaaa atttacacaa aatctgttaa taagatatta tattgtcagt
      841 aatatttttt cctatttatt gtgattcctg cctacattcc tcttcgctct ttcggtatac
      901 gtaaaattcc gaatattacg caatttctac cggaatattc acttaacaaa accgtattca
      961 acgcccaaac catcattggc tggggcttac gcccgaccac ccaccaagca cgtgcttttg
     1021 cacaatcaca tggcttgccg tttgtagcct tggaagacgg ttttttacgc tcactgggct
     1081 taggcgtggc cggttatccg cccttcgcac tggtttacga cgatatcggc atctattacg
     1141 acacaacccg cccatcgcgt ttggagcagt tgattttagc cgcaaacatg ccgtctgaaa
     1201 tgcttaacca agcgcagcag gccattgatt tgattttgac gcaccgtttg tctaaatata
     1261 accatgctct ggatttttca gacggcctcg tacaagacag caaaaacatt gttttggtaa
     1321 ttgatcaaac tttcggcgat atggcgattc aatatggcgg cgcagatgaa gccacattcc
     1381 gccaaatgtt tcagacggcc ttagccgaaa atcctgatgc ggaaatctgg gtcaaaaccc
     1441 atcccgatgt attgagcggc aagaaacagg gttaccttac tgatttggca cagcagccgc
     1501 gtgtgcgttt attggctgaa gacattaatc cgatttcgct gctgcaagcg gtggacaaag
     1561 tgtattgcgt gacctcgcaa atgggttttg aagccttgtt gtgcggcaag cctttggtaa
     1621 cgtttggttt gccgtggtat gccggctggg gtgtaagcga cgaccgccat cctgaaatca
     1681 accgccttgt tcaaacccaa cgccgcgcca cccgcaactt gctgcagctc ttcgccgcag
     1741 cctatctgca atacagccgc tacctcaacc ccaataccgg cgaagcaggc agcctctttg
     1801 atgtcatcga ctatctggcg acggtcaaac gtaaaaacga caaattgcgt ggcgagttat
     1861 attgcgtcgg tatgtctttg tggaaacgcg cggttgccaa accgttcttt aacgtaccct
     1921 cttgccgtct gaaatttatc tcttccaccc aaaaactggc aagggtcaaa ctgtccgacg
     1981 atgcacgcat cctggcttgg ggcaacggca aagaggccat cgtccgcttt gccgaacaac
     2041 accacatccc cctgctgcgc atggaagacg gctttatccg ctcggtcgga ctcggctcca
     2101 acttagtgcc gccgctgtcg ctcgttaccg acgatatggg tatttacttc aatgccgaag
     2161 ccccatcccg ccttgaacac atcctgcaaa accaaaactt cgacgatcaa gactttcaga
     2221 cggccttgaa gttgcaaaaa atgctgaccg aaaaccatat cagcaaatac aacgtcggca
     2281 actcagactt taccgcccca tcaaccgaca aaaccgtgat cctcgttccc ggtcaggttg
     2341 aggatgatgc gtctatccgc tatggttcgc cccaaatcta tcacaatctg gatttgctcc
     2401 gtaccgtacg cgaacgaaac cccaatgcct atatcatcta caaaccgcat cccgatgtag
     2461 tcagcggtaa ccgcatcggc catatttccc ctgaagatgc tgcacgatat gccgaccaaa
     2521 ccgccgaaca agccgacatc ctgacctgtc tccaatacgc agacgaaata cataccatga
     2581 cttcgctgac cggttttgaa gccttgttgc gcggcaaaaa agtcagctgc tacggcctgc
     2641 ctttttacgc aggctggggg cttacccaag atctgctccc catcccgcgc cgtagccgca
     2701 gacttgagct ttggcagctg attgccggca cgctcatcca ctatcccgac tacatccacc
     2761 ccgaaaccca tcaggccata aatgcggaaa ccgcagccca aatcctgata cgacaaaaaa
     2821 atatgcaaaa aaacaacaac ggattacatc gcgggtgctt tgccaaaaaa ttaggtaaaa
     2881 tcaaacaact atatcgatct ttcaaataaa taccatcaaa gttaacgatg cgtcataaac
     2941 ttgcctctat tgcggcatca ttgcctttgc atcgttaatt ctcttggcgt atgcttgaaa
     3001 gttcaaccta aaactattac ataaaaaaca aaaccacatt gcaacatgaa acagaccgtc
     3061 ctcaaaaata acctgcaaaa cctgcttgaa agcgcagaaa atatcctgct gcttcaaggc
     3121 cctgtcggcg atttttttct gcgccttgcc gactggctga ctgcaaacgg caaaaccgta
     3181 cataaattca actttaatgc aggcgacgac tatttttatc cgcccactca agcgcatacc
     3241 gttgttttta acgacaacta cgatgccttt cctgagtttt tgcaagaata catcactcaa
     3301 catcacatcc aggccgttgt ctgctttggc gacacacgcc cttatcacgt cattgcaaaa
     3361 cgcattgcaa acgaaaacca agccagtttc tgggcgtttg aagaaggcta tttccgcccc
     3421 tactacatca ccttagaaaa agacggcgtc aacgcatttt ccccgttgcc gcgccgtgcc
     3481 gacttttttc ttgaacaatt ccctaagctt gcccagcaag aatataaagc gccaacgccg
     3541 gtacacggcg gttttacgcc catggcaaaa aacgctatcc gttactatat cgagttgttc
     3601 cgcaatccac gcaaataccc cgactacatc caccaccgcg cacccaatgc cggccattac
     3661 ctcaaaccgt ggtcgctctc catcctcaag cgtttgaact actatattga agacatccaa
     3721 atcgccaaac gtgtggaagc aggcaaatac ggcaagtttt ttattgttcc cttacaggta
     3781 ttcaacgaca gccaagtccg tatccattgc gactttccca gcgtccgcag cttcctgctc
     3841 catgttttga gttcatttgc cgagcacgcg cctgccgata ccaacatcat catcaagcat
     3901 catccgatgg accgcggttt tatcgactac tggcgcgaca ttaaacgctt tatcaaagaa
     3961 caccccgaac tcaaaggccg cgtgatttat gtccatgatg tccccctgcc cgttttcctg
     4021 cgccacggtc tcggcatggt caccatcaac agcaccagcg gcctgtccgg actgattcac
     4081 aatatgccag ttaaggttct cggccgtgcc tattatgata ttcccggcat tactgaccaa
     4141 aataccttgg cagaattttg gaatcatccg acaccgcctg acaaagagct gttccatgcc
     4201 taccgaatgt accacctcaa cgtgacccaa attaacggca acttctacag tcaggtgttt
     4261 ttccccaaca aaaaaacctc caactcttcc acaccagtaa tctgacttag cgaaggaagt
     4321 tcaggccgtc tgaaaacatt tcagacggcc tgaaacaatc aataccttag ctactgccat
     4381 gtaaataaaa cacaaaaatc tgcatttatc attaacaata aattacaaaa acagtataat
     4441 gaccgagctg ccatgagcgc ataccgactc aacctgagcc ctttataaca cacaaaatat
     4501 ggatgtatcc ccaggcaaaa caatataaca agccaaacat cctaaagata agccggcaag
     4561 gaaatacact ctgcaaaacg atgccgagca atatttttac aaagccctca accggtatcg
     4621 ccgcccatat gccgcagcat ccgtcttcca ctttatatcc gcccgcaaac catgaccgcc
     4681 gctcctgata tcctataccg tcaagccgcc gcccttttgg aacaatccaa taccgcccaa
     4741 gccctgcccc tgctgcaaca ggccgcagag cagggatata cggaagctgc ttttgtattg
     4801 ggcgaccatc tgctgcaaaa cggtcatccg gagcaggcac ttccatggtt ggaagccgcc
     4861 gcggcccaac gccatcccaa ggcactcttt accctgctgc aacaacgcga acacaacggc
     4921 accccgaccg gacagcttct taacgaatac gcctggctga gtgagcaagg tcacctcgaa
     4981 gcccaattaa ttctcatgcg ttaccacacg cagcgcaacg atccacaatc gctctactgg
     5041 gcggagcttg ccgctgccca atatgccgca cctgcgtatt accatttggc acgccatcat
     5101 caacgccaag gcgacgttgc aacagctatc gaacaatacg aaaaagcggc agcgctcggc
     5161 gtgactgcag cctgctggca actcggtcaa atctacttct acggcacagg tgtcagcccc
     5221 aaccacgcac aagccgaaca ctatctcgaa caagccgcgc aagccggcca catcgccgca
     5281 caaaccctgc tggccgacct tcttgctgcc caacgcaaac ccgaagcctt agaatggtat
     5341 cgtcgtgccg ccgacaaaga gcaagcggaa gcacaggcca agctggctca atacgccctg
     5401 accggcgaac tttccgaacg cgatccgttt caagcggcac gatatgccaa agccgccgct
     5461 gagaaagacc atcccgaagc cctgaaaatc atgggcgacc tctaccgcta cggcctcggc
     5521 atcaaagctg acaaccatat cgcgcacgat tactaccacc gtgctgccgc gctgggttct
     5581 gccgccgcag cacaaaaact catcagcgac gccgcgctgt accatccgca acaatacgaa
     5641 caaatcaaaa ctgccgccct gcaacagcaa caaaccgaaa ccatctaccg tttggcggaa
     5701 acacaagccc atgccatcgg tcgtcccgcc gactataatg ccgcacgcaa aaattacatg
     5761 gaagctgccg ggttccacca taaaaacgcg gcggctgcct taggccgcat ctaccattac
     5821 ggcctcggta cggcgcaaga tcctcgggcg gctgcacact ggtacgccat tgctgccgaa
     5881 caaaaccacc cttccgccca ataccacctc gcctgttttt actatcacgg gcaaggtgtc
     5941 ggctgtcatg ttccgaccgc ctgctactgg ctgcaggccg ccatcggcaa cggccacact
     6001 tcggccgaat cattaatatc cctattagaa caatggcgac gcgaagcaca ccatgccatc
     6061 ggacaaaagg ccgtctgaaa agatttacac tcgcattttt tgacaatctt taactattcc
     6121 cctaatattt gccagttatt tttcacggac acgccattgt tttcatttct ttctgaaaac
     6181 accttgtccg cgcatcaata ccatgacact cggcggataa cgccaagcgt tgaaacacac
     6241 tacatccgga acaaaaacgg atgctcggaa aaatatttct aggaggtgaa acaacatgga
     6301 atgggaattc aacagttatt acacactgat tgccgccacg ctcgtgttgc tggttggtaa
     6361 atttctggtt caaaaaatca aattcttacg agacttcaat attcccgagc cggtcgctgg
     6421 cggtttggtt gccgcgatta tcctgtttgc gctgcacgag gcgtacggcg tgagcttcaa
     6481 atttgagaaa ccgctgcaaa atgcgtttat gctgattttt ttcacgtcca tcggcttgag
     6541 cgcggatttt tcccgtttga aggcgggcgg tttgccgctg gtggttttta ccgcgattgt
     6601 gggcggattt atcttggtgc aaaactttgt cggggtcgga ctggctacgg ctttgggttt
     6661 ggacccgctc atcggtctga ttaccggttc ggtgtcgctg acgggcggac acggtacgtc
     6721 aggtgcgtgg ggacctaatt ttgaaacgca atatggcttg gtcggcgcaa ccggtttggg
     6781 tattgcatcg gctactttcg ggctggtgtt cggcggcctg atcggcgggc cggttgcgcg
     6841 ccgcctgatc aacaaaatgg gccgcaaacc ggttgaaaac aaaaaacagg atcaggacga
     6901 caacgcggac gacgtgttcg agcaggcaaa acgcacccgc ctgattacgg cggaatctgc
     6961 cgttgaaacg cttgccatgt ttgccgcgtg tttggcgttt gccgagatta tggacggctt
     7021 cgacaaagaa tacctgttcg acctgcccaa attcgtgtgg tgtctgtttg gcggcgtggt
     7081 catccgcaac atcctcactg ccgcattcaa ggtcaatatg ttcgaccgcg ccatcgatgt
     7141 gttcggcaat gcttcgcttt cgcttttctt ggcaatggcg ttgctgaatt tgaaactgtg
     7201 ggagctgacc ggtttggcgg ggcctgtaac cgtgattctt gccgtacaaa ccgtggtgat
     7261 ggttttgtac gcgacttttg ttacctatgt ctttatgggg cgcgattatg atgcggcagt
     7321 attggctgcc ggccattgcg gtttcggctt gggtgcaacg ccgacggcgg tggcaaatat
     7381 gcagtccgtc acgcatactt tcggcgcgtc gcataaggcg tttttgattg tgcctatggt
     7441 cggcgcgttc ttcgtcgatt tgattaatgc cgcgattctc accggttttg tgaatttctt
     7501 taaaggctga ttttccgcct ttccgccaaa gcacctgcaa ggtttaccgc ctgcaggtgc
     7561 ttttgctatg atagccgcta tcggtctgca ccgtttggaa ggaacatcat gtatcggaaa
     7621 ctcattgcgc tgccgtttgc cctgctgctt gccgcttgcg gcagggaaga accgcccaag
     7681 gcattggaat gcgccaaccc cgccgtgttg caaggcatac gcggcaatat tcaggaaacg
     7741 ctcacgcagg aagcgcgttc tttcgcgcgc gaagacggca ggcagtttgt cgatgccgac
     7801 aaaattatcg ccgccgccta cggtttggcg ttttctttgg aacacgcttc ggaaacgcag
     7861 gaaggcgggc gcacgttctg tatcgccgat ttgaacatta ccgtgccgtc tgaaacgctt
     7921 gccgatgcca aggcaaacag ccccctgctg tacggggaaa ccgctttgtc ggatattgtg
     7981 cggcagaaga cgggcggcaa tgtcgagttt aaagacggcg tattgacggc agccgtccgc
     8041 ttcctgcccg tcaaagacgg tcagacggca tttgtcgaca acacggtcgg tatggcggcg
     8101 caaacgctgt ctgccgcgct gctgccttac ggcgtgaaga gcatcgtgat gatagacggc
     8161 aaggcggtga aaaaagaaga cgcggtcagg attttgagcg gaaaagcccg tgaagaagaa
     8221 ccgtccaaac ccacgcccga agacattttg gaacacaatg ccgccggcgg cgatgcgggc
     8281 gtaccccaag ccgcagaagg cgcgcccgaa ccggaaatcc tgcatcctga cgacggcgag
     8341 cgtgccgata ccgttaccgt atcacggggc gaagtggaag aggcgcgcgt acaaaaccag
     8401 cgtgcggaat ccgaaattac caaactttgg ggaggactcg ataccgacgt gcaaaaagag
     8461 ttggtcggcg aacaacgcaa gtgggcgcag gaaaaaatca gcaactgccg acaagccgcc
     8521 gcgcaggcag accggcagga atacgccgaa tacctcaagc tgcaatgcga cacgcggatg
     8581 acgcgcgaac ggatacagta tcttcgcggc tattccatcg attaggggca aaccgatgac
     8641 taccgtcccc aaaagcagga ttcccgtcaa accgctgccc gaaaaaacca cagacgaagc
     8701 caaagtcgaa aaatggcggc agctcggtgc ggaacacggt ttgtcgggcg aatgggcagt
     8761 tgccgccaga ttgggcgaga acggttttac cgaagaacag atggaaaata tcgccaacct
     8821 gttcggcaga taaagggaaa attgacggaa atgccgtctg aaaccctgtt atcggtttca
     8881 gacggcattt tgactaatac ggtacgcagg cgcaaaacag ccggcttttt atgtgtttcc
     8941 tatgctgatg ttccaacaca caggacgata caaaaagcgt cgccctatgt gccgtcctga
     9001 ttcggaaagg gttacgctcc tcccaaatat agtggattaa caaaaacc
//
LOCUS       DAXHKG010000081         8922 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.081, whole genome shotgun sequence.
ACCESSION   DAXHKG010000081 DAXHKG010000000
VERSION     DAXHKG010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8922
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.081"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            188..622
                     /locus_tag="ACFMWP_001432"
     CDS             188..622
                     /locus_tag="ACFMWP_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC5892017.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(671..2014)
                     /locus_tag="ACFMWP_001433"
     CDS             complement(671..2014)
                     /locus_tag="ACFMWP_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HFC5892018.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLVSDGIPLAGAWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2019..2672)
                     /locus_tag="ACFMWP_001434"
     CDS             complement(2019..2672)
                     /locus_tag="ACFMWP_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HFC5892019.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2823..3113
                     /gene="gatC"
                     /locus_tag="ACFMWP_001435"
     CDS             2823..3113
                     /gene="gatC"
                     /locus_tag="ACFMWP_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HFC5892020.1"
                     /translation="MALTLADVDKIARLSRLHLTAAEKEKSLQELNDIFAMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            3176..4621
                     /gene="gatA"
                     /locus_tag="ACFMWP_001436"
     CDS             3176..4621
                     /gene="gatA"
                     /locus_tag="ACFMWP_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HFC5892021.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAITGFDPKDSTSLEREKEDYTRDLNQPLKGVKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4618..5550
                     /locus_tag="ACFMWP_001437"
     CDS             4618..5550
                     /locus_tag="ACFMWP_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HFC5892022.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5593..7023
                     /gene="gatB"
                     /locus_tag="ACFMWP_001438"
     CDS             5593..7023
                     /gene="gatB"
                     /locus_tag="ACFMWP_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HFC5892023.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPELR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGSKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ASGQGKPTANWMNGELAAALNKAGLELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPESTIAEIIEKHGLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7115..8125
                     /locus_tag="ACFMWP_001439"
     CDS             7115..8125
                     /locus_tag="ACFMWP_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HFC5892024.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQIGGHSEQALSEAEKAQGKILMCCTTAQSDISLNIPGYKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQDSGRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="ACFMWP_001440"
     CDS             complement(8254..8886)
                     /gene="pdxH"
                     /locus_tag="ACFMWP_001440"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HFC5892025.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
BASE COUNT         2278 a         2744 c         2171 g         1729 t
ORIGIN      
        1 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatattttt gggaatctgt
       61 tttaccccaa tatataaagc accatattaa ggcggagttt cttccccact ttgaaccgaa
      121 cccggaaaag acaccgccca agccaatcct gatgctgccc cggcagccaa ccatcaagga
      181 aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt tcctgcccgt
      241 cccgcccgcc gaagccgccg tctttacttg gaaggacggc ggcggcaaca gctattcgga
      301 tgtgccgaaa cagcttcatc ccgaccagag ccaaatcctc aacctgcgga cgcgccaaac
      361 caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg gcgcggcaca
      421 ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa agaaaagaat
      481 tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa
      541 agcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat acaataacgc
      601 cgtaaacaaa tactgccgtt aatcggctct agcgcaaacc ccatgccgtc tgaaacggca
      661 cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac agcccgaatt
      721 cggacaattc gcgcccgtaa ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc
      781 tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca aaccgccaag
      841 cgcgttcggt atcggcggta taaatgcagg cacctagccc gaacggggaa tcattggcaa
      901 gggcgatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc ccgaatactt
      961 cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg ggataaaacc
     1021 agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt gaaacggcat
     1081 cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt gcaagcgtag
     1141 tatcgggatg tttggggtcg cccattttca atttggcgca ttcggcaaga aacagcgtga
     1201 taaaacgatc ggctgcggct tcggttacga tgatgcgttt ggcggcgttg cacgattgcc
     1261 ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg
     1321 gcatcacgat aaaggcgttg ctgccgccga gttccaagac ggttttcttg aggtttgcgc
     1381 ccgcatgtgc cgcaaggatg cgccccgtat gcgtcgagcc ggtaaacgcc atcgcatcgg
     1441 tatcttcaac cgccttgagc gtgcccgcct catccaacca cgcgcctgcc aaaggaatgc
     1501 cgtctgaaac caaatcaaac aacgcctgac tgacgcgtgc cacgctgggc gcgggtttga
     1561 cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc tgccagacgg
     1621 gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcaaacctt acctgactca
     1681 aactcgcctg cgtcgcgatg gttttgtggg cgagcagttc gggagcgagg cgggcgtaat
     1741 agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcagg cagcgtccga
     1801 cttcttcgca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg tcggcaaatt
     1861 tttgcagacg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg ccgcgcattt
     1921 tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg cggtaaagcg
     1981 tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag ttgcgggaat
     2041 atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat catacccatg
     2101 atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt ccctgcaaca
     2161 attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat cagcgcgatg
     2221 tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc gcccgggccg
     2281 atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg ggcggggcgc
     2341 gcctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc
     2401 atcatcgaaa tggcgatcag cagcaccaaa atcccgccgc cgacctgaaa cgaaccgacg
     2461 ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc aatcacggca
     2521 aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct gtgcccgttg
     2581 gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa aaaagccaca
     2641 atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa acccgtgcgg
     2701 caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa ttaaaaattc
     2761 aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca aggatgcttt
     2821 tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga ctgcacctga
     2881 ctgcggcaga aaaagaaaaa tcgcttcaag aattaaacga cattttcgct atggtcgaac
     2941 agatgcaaac catcaacaca gacggcatcg aaccgatggc gcatccgcac gaggccgccc
     3001 tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat caggcggttg
     3061 ctccggaagt acgcaaccgt ctgtatatcg taccgcaagt tatcgaagaa taatccgaat
     3121 atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa gatttatgac
     3181 ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt ccgccgtcga
     3241 actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca acggctacat
     3301 caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac gtatcgcgca
     3361 gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt tctgccaaac
     3421 cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc cttacaccgc
     3481 caccgtcgtc caaaacctgc tcgacgaagg catggtaacg ctcggccgca ccaatatgga
     3541 tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggcgcggcca aaaatccgtg
     3601 gaatccggaa cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg ttgccgcgcg
     3661 ccttgcccct gccgcgctcg gttcggatac cggcggctct atccgccagc ctgcatcgca
     3721 ctgcggcatt accggcatca aacctaccta cggcacggtt tcccgcttcg gtatggtcgc
     3781 ctacgcctcc agcttcgacc aggccggccc gatggcgcaa actgccgaag actgcgcgat
     3841 tctgttgaat gcaataacag gtttcgaccc caaagactcc accagtctcg aacgtgaaaa
     3901 agaagactac acccgcgatt tgaaccaacc gctcaaaggc gtgaaaatcg gtctgcccaa
     3961 agaatatttc ggcgaaggca acagcgccga tgttctgacg gcattgcaaa acaccattga
     4021 tttgctgaaa gcccaaggcg cggaattgat tgaagtttcc ctgccgcaaa ccaagctgtc
     4081 catccccgcc tactacgtcc tcgcctccgc agaagccggc accaaccttt cacgttacga
     4141 cggcgtacgt tacggacacc gtgccgccca attcgccgat ttggaagaaa tgtacggcaa
     4201 aacccgcgcc gaaggtttcg gcagcgaagt caaacgccgc atcatgatcg gcacttatgt
     4261 actgtcgcac ggctactacg atgcctacta tctcaaagcc caaaaactgc gccgcctcgt
     4321 tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc cgaccgcacc
     4381 cactgcagcc ccaaaaatag gagcggatgc ttcgccggtt gaaacctact tgagcgatat
     4441 ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg caggcttcag
     4501 cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg aagccaaaat
     4561 cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac gacccgaatg
     4621 aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta tgcgccttta
     4681 tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa agaaatttac
     4741 gccttcgagc agtttgtcaa cgcctcccct atccgtcagg ggctgttcct ccactgcccg
     4801 caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg caaacgccgt
     4861 ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac agacatcctg
     4921 caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga cggcatcagc
     4981 ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt atctttgcgc
     5041 gacgaagcag gcaaccggct gtatatggcg actttcgcct ttgtcggcac acacctgctg
     5101 acagcctccg tacaagggcc tgcgggtgaa gaagccaaag acactgtccg ccgcataacc
     5161 aaacaacttc acggcttgcg tccccaacaa ctgatggtaa ccgcactgca atatttcgcc
     5221 gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt caaactgcgc
     5281 tggaaactta aaaagcgcgt caaaatgaat tacgacgcat tctggcagga atacggcgca
     5341 agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa agaccttacc
     5401 gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct ggacaacatg
     5461 gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga cggcatccaa
     5521 acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga tattttagag
     5581 aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt ccaattgaac
     5641 accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc caacgcgcac
     5701 gccagcgtag tggaatgcgc gctgccgggc gtactgccgg taatgaaccg agaagtcgtt
     5761 gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa aaacgtgttc
     5821 gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag ccagttggat
     5881 ttgccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt gaaaaccatc
     5941 aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtgcatga aggcttgaac
     6001 ggcgcgaccg gtatcgacct gaatcgcgcc ggcacgcctt tattggaagt cgtatccgaa
     6061 ccggaattgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca cagcttggta
     6121 acctggctgg acatttgcga cggcaatatg gcggaaggtt cgttccgcgt cgatgccaac
     6181 gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat taaaaacctc
     6241 aattccttcc gtttcttgga gcaggcgatt aattacgaag cggaagcgca aatcgagatt
     6301 ttggaagacg gcagcaaagt gcagcaggcg acgatgctgt tcgacccaga aaaaggcgaa
     6361 acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc cgacccggat
     6421 ttgttgcccg tcatcatttc agacgctcaa atgcaaaaag ccaaagcaga aatgcccgag
     6481 ctgccgaaag aaatggcggc acgtttcgtg gcagattacg gcgtgtccga atacgacgcg
     6541 cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc caaagcaagc
     6601 gggcaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc gctgaacaaa
     6661 gccggcctgg aacttgccga cagcccgatt accgccccgc gcctcgccgc gctggtgggc
     6721 aaaatcgccg acggcacatt aagcagcaag ttagcgaaaa aagcctttga agccatgtgg
     6781 gcagaacccg aatccaccat tgccgaaatc attgaaaaac acggcttgca gcaaatgacc
     6841 gataccggcg cagttgaagc gatggtggac gaagtgctgg caaacaacgc caaagccgtg
     6901 gaacagttta aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca agtgatgaaa
     6961 gccagcaaag gcaaagccaa ccccgcgcaa gttcaagaac tgattaaagc caaacttgcc
     7021 tgataagcaa gatgccgtct gaaacccaga tccgacgttc agacggcgtt ttcacagtct
     7081 gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta ccctgcccga
     7141 ccaaaccacc tttgccgccg gcgacggtga aaccgttttg gccgctgccg cccgtcaaaa
     7201 cctcaatctg ccccattcct gcaaaagcgg tgtctgcggg caatgcaaag ccgaactggt
     7261 cagcggcgat attcaaatag gcggacactc ggaacaggct ttatccgaag cagaaaaagc
     7321 gcaaggcaag attttgatgt gctgcaccac tgcgcaaagc gacatcagcc tcaacatccc
     7381 cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg aaagtatggt
     7441 tttcaaacac gatgtcgccc tcttgaaact tgccctgccc aaagcccctc cgtttgcctt
     7501 ctatgctggg caatacatcg atttactgct gccgggcaac gtcagccgca gctactccat
     7561 cgccaattcg cccgaccaag aaggcatttt ggaactacac atccgcaggc gcgaaaacgg
     7621 tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag gcatcgtccg
     7681 cgttaaaggc ccgctcggtt cgtttaccct gcaggaagac agcggcaaac ccgtcatcct
     7741 gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc ttatccgcca
     7801 agacagcggc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg atttgtatgc
     7861 cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca cccccgtatt
     7921 gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca tcgcggcaca
     7981 agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg ccatgaccga
     8041 acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt ttttctccga
     8101 cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg ctttccgttc
     8161 ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct gaagcccgat
     8221 tccggttttc agacggcata tgttttttcc tgttcaaggc gacagccgct cgcgtatcca
     8281 gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc tgccctgcca
     8341 aaactcaatc aaatcgggaa tcacaatata gccgccccaa tgcggcggac gcggcacgtg
     8401 caaaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct tgttcggaat
     8461 cacctcgctc tgcgcacttg cccacgcacc caaacggctc tgatacgggc ggctctcaaa
     8521 atattcgtcc gacaacttct ccgccagcct ttcaacacgc ccttccacgc gcacctgacg
     8581 ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca gcgaacgccc
     8641 cttgcggctg tgataattcg taaagaaaac aaaaccttca gaattaactt ccttcagcag
     8701 caccatacgg ctgttaggcc tgccgcgtcc gtcgaccgcc gccacattga ccgccgtcgg
     8761 ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct cgatcggatt
     8821 gtcggcgcaa tcgccttccg acaattcccg tttgctgtaa tcttcccgaa tattgtgcaa
     8881 atccatttac cgctcctctt aatagtggat taacaaaaac ca
//
LOCUS       DAXHKG010000082         8897 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.082, whole genome shotgun sequence.
ACCESSION   DAXHKG010000082 DAXHKG010000000
VERSION     DAXHKG010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.082"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            248..1147
                     /gene="crgA"
                     /locus_tag="ACFMWP_001441"
     CDS             248..1147
                     /gene="crgA"
                     /locus_tag="ACFMWP_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HFC5892026.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1374..4589)
                     /gene="carB"
                     /locus_tag="ACFMWP_001442"
     CDS             complement(1374..4589)
                     /gene="carB"
                     /locus_tag="ACFMWP_001442"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HFC5892027.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFKLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQVLGYGICATRGTA
                     QYLTEQGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4596..5144)
                     /locus_tag="ACFMWP_001443"
     CDS             complement(4596..5144)
                     /locus_tag="ACFMWP_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892028.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQKFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDGKSIGSLNNIAELLQLNKPSLVYHSQTKEFFKIKSSADLENILSNIEDDVLAS
                     ILEKGNTFLKSYVTKQPSLIQE"
     gene            complement(5147..5710)
                     /locus_tag="ACFMWP_001444"
     CDS             complement(5147..5710)
                     /locus_tag="ACFMWP_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC5892029.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITIDNIDLSNKNILVIDDLFDSGA
                     TLEISTEKLFSKNARSVIVLAMTKTRG"
     gene            complement(6117..6284)
                     /locus_tag="ACFMWP_001445"
     CDS             complement(6117..6284)
                     /locus_tag="ACFMWP_001445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892030.1"
                     /translation="MADFDWIIENNRIKPTELSIYKGRLKNKKQPAQPVFPAEPLIPT
                     AAPSSLPVGKR"
     gene            complement(6288..6677)
                     /locus_tag="ACFMWP_001446"
     CDS             complement(6288..6677)
                     /locus_tag="ACFMWP_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HFC5892031.1"
                     /translation="MSTHEKLLTADNPVLHQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7269..7394)
                     /locus_tag="ACFMWP_001447"
                     /pseudo
     CDS             complement(7269..7394)
                     /locus_tag="ACFMWP_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7440..8573)
                     /gene="carA"
                     /locus_tag="ACFMWP_001448"
     CDS             complement(7440..8573)
                     /gene="carA"
                     /locus_tag="ACFMWP_001448"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HFC5892032.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         2029 a         2226 c         2288 g         2354 t
ORIGIN      
        1 atattcattt gttacctcgt ttgtgaattg atgaatgtat tgtgccgttt tactttataa
       61 tttaaaagtg caaaaataag aaaacacttt tgcgtccaaa tgaaataatc agatgtttca
      121 acacacggga tgacacataa agcgtctccc tatgtgccgt cctgattcgg aaggggttac
      181 acccctccca aataaagtct gatcctgccg ccctaaaggg cggggttcca accgaaaagg
      241 aaacacgatg aaaaccaatt cagaagaact gaccgtattt gttcaagtgg tggaaagcgg
      301 cagcttcagc cgtgcggcgg agcagttggc gatggcaaat tctgccgtaa gccgcatcgt
      361 caaacggctg gaggaaaagt tgggtgtgaa cctgctcaac cgcaccacgc ggcaactcag
      421 tctgacggaa gaaggcgcgc aatatttccg ccgcgcgcag agaatcctgc aagaaatggc
      481 agcggcggaa accgaaatgc tggcagtgca cgaaataccg caaggcgtgt tgcgcgtgga
      541 ttccgcgatg ccgatggtgc tgcatctgct ggcgccgctg gcaacaaaat tcaacgaacg
      601 ctatccgcat atccgacttt cgctcgtttc ttccgaaggc tatatcaatc tgattgaacg
      661 caaagtcgat attgccttac gggccggaga attggacgat tccgggctgc gtgcacgcca
      721 tctgtttgac agccgcttcc gcgtaatcgc cagtcctgaa tacctggcaa aacacggcac
      781 gccgcaatct acagaagagc ttgccggtca ccaatgttta ggcttcaccg aacccggttc
      841 tctaaataca tgggcggttt tagatgcgca gggaaatccc tataagattt caccgcactt
      901 taccgccagc agcggtgaaa tcttacgctc gttgtgcctt tcaggttgcg gtattgcttg
      961 cttatcagat tttttggttg acaacgacat cgctgaagga aagttaattc ccctgctcgc
     1021 cgaacaaacc tccgataaaa cacacccctt taatgctgtt tattacagcg ataaagccgt
     1081 caacctccgc ttgcgcgtat ttttggattt tttagtggag gaactgggaa acaatctctg
     1141 tggataattc tataaaaacc tgccataaaa ttgtttttac tcacttaata actttgagaa
     1201 aaaataaata agatgatgta tagccggcgg caatggcagt ctatatgggg agcgtgatag
     1261 ggctgttcct tatgtacggc ttgtgtgtgg caacatcggc tttccaaatg acaaaatgcc
     1321 gtctgacacc gtaaaaaaag gtttcagacg gcattttcaa cctgattcag gcatcagttg
     1381 cggtttttca aacgcccgtg caactcttga acgctgtaca cgcccagatg gtctcggctt
     1441 ttcgcacctt cgctcatcgc ttcgccgccg gcagtggtgg tgtattgcgg cacacgttgc
     1501 tgcaatgcgc tttggcggat gatgtggctg tcggacacgg attgcggatc gctggaaacg
     1561 gtattcacga ccagtgcgat ttcaccgttt ttcagtgcgt cgccgatgtg cgggcggcct
     1621 tcggggactt tattgatggt ttgtacaatc agtccctgtt cggtcaggta ttgcgccgtg
     1681 ccgcgtgtgg cgcagatgcc gtagcctaaa acctggaagt ttttagcggt tttgataacg
     1741 cgttctttgt cttcttcgcg cacggagagg aagattttgc cggtcgggtt gaggcgttcg
     1801 cccgcaccga gttgggcttt gtagtaggct tcgccgaagc ttgcgcccac gcccatcact
     1861 tcgccggtgg agcgcatttc cggtcccaaa atcgtgtcta cgcccgggaa tttgatgaat
     1921 gggaacacgg cttctttaac ggcatagaaa tcggggacaa cttctttttc cacgccttgt
     1981 tctttcaggg aaatacctgc catgcagcgt gcgccgactt tggcgagcgg cacgccggtg
     2041 gctttggaga cgaagggcac ggtacggctg gcgcgcgggt tcacttccaa cacgaacacc
     2101 acgccgtcct gcacggcaaa ctgcacgttc atcagaccga ccacgcccag cgcgtacgcc
     2161 atcgctttgg tttggcggcg gatttcgtct tggatttctt cgcttaagga gtagggcggc
     2221 agcgagcagc cggagtcgcc ggagtggatg cccgcctgtt cgacgtgctg cataatgccg
     2281 ccgataacca cgtctttgcc gtctgaaacg cagtccacat cgacttcaat cgcgttgttg
     2341 aggaagaaat cgagcaacac ggggctgtct tcggaaacct gcacggcttc gcgcatgtat
     2401 ttttgcaagg cttcggcaga gtggacaatc tgcatggcgc ggccgcccaa aacataagac
     2461 gggcgcacga ccagcggata gccgatttct tcggctttga cgagtgcttc ttcttcgttg
     2521 tgggcgatgc ggttgggcgg ttggcgcaga cctaagtcgt tcaacacttt ttggaagcgt
     2581 tcgcggtctt cggcggcgtc gatgctgtcg gcggatgtgc cgatgatgtt tacgccgttt
     2641 tcaaccagcg cgttggcgag tttgagcggg gtttgaccgc cgtaatgcac aatcacgccc
     2701 cacgggtttt cggtgcggac gatttccaac acgtcttcca atgtcagcgg ctcgaaatag
     2761 aggcggtcgc tggtgtcgaa gtcggtggac acggtttctg ggttgcagtt caccataatc
     2821 gtttcaaagc ccgattcgcg cagggcgagt gcggcgtgaa cgcagcagta gtcaaactcg
     2881 atgccctgac cgatgcggtt cgggccgccg ccgagaatca tcactttttt acggtcggaa
     2941 ggacgggatt cgcattcttc ttcgtaagtg gagtaaagat aggcggtttc ggtggcgaac
     3001 tcggcggcgc aggtgtcaac gcgtttgtaa accggatgca gcttcagcgc gtagcggtgt
     3061 tcgcgcactt ctttttcgct tacgttcaac aattgtgcca aacgtttgtc ggagaagcct
     3121 ttgcgtttca gacggcgtag ggcggcgaaa tccaaatcac tcaaaatgcc gtctgaaacc
     3181 gctttttctt ccttcatcaa gtcttcgatt tgcgccagga accaagggtc gatggcgcag
     3241 atttcgtgga tttcttccag cgtgaagccg gcgcggaacg cgtctgccac aaacagcata
     3301 cgttcggggc cggggtttgc cagttcgcgg cggatttccg ctttgtcgga gcttctcgga
     3361 ttgaagccgc acaagcctgt ttccaagccg cgcagggctt tttggaagct ttcctgaatc
     3421 gtgcggccca tcgccatcac ttcgcccacg gatttcatct gcgtggtcag gcggtcgtct
     3481 gcggcaggga atttttcaaa cgcaaaacgc gggattttgg ttaccacata gtcgatggac
     3541 ggctcgaatg acgcgggggt tttgccgccg gtgatgtcgt tgcgcaactc gtccagctta
     3601 aagccgaccg ccagtttcgc cgccaccttc gcaatcggga agcccgtcgc tttggaagcc
     3661 agcgcggacg aacggctcac gcgcgggttc atctcaatca caatcatctc gccgttttca
     3721 gggttcaccg caaactgcac gttcgagccg ccggtatcca cgccgatttc gcgcaatact
     3781 gccaacgaag cattacgcat gatttggtat tctttgtccg tcagcgtttg cgcaggcgca
     3841 accgtaatcg agtcgcccgt atgcacgccc atcgggtcga agttttcaat cgagcagata
     3901 atgatgcagt tgtcgttctt gtcgcgcacc acttccatct cgtactcttt ccagccgaga
     3961 acagactgct caatcagcag ctcgtgcgta ggcgacgcat cgaaaccgcg ttcgcaaatc
     4021 gccaaaaact catctttatt gtaggcaatg ccgccgcccg aaccgcccat cgtgaaagac
     4081 ggacgaatca gggtagggaa gccgacctgt tcttgcgctg ccaaagcttc gttcatcgtg
     4141 tggcagacaa aagatttcgg gcaggagagg ccgatttttt ccatcgcttc tttaaaacga
     4201 ccgcggtctt ccgccttgtc aatcgcgtct tccgtcgcgc cgatcagctc gacattgtat
     4261 ttcgccagca cgccgttgcg cgccaaatcc agcgcacagt tcagcgcggt ctgaccgccc
     4321 atcgtgggca gaatcgcatc aggacgctcc ttggcgataa tcttctccac cgtctgccac
     4381 ataattggct cgatgtaggt aacatccgcc atttcagggt cggtcatgat ggtggcgggg
     4441 ttggaattca ccagaatgac tttatagcct tcttcacgca aagccttaca ggcctgtgcg
     4501 cccgaatagt caaattcgca ggcctgaccg ataacgatag ggccggcgcc gatgataagg
     4561 atggatttta ggtcggtacg tttgggcatg ggtggttact cttgaattaa agaaggttgt
     4621 tttgttacat agcttttaag aaaagtattt cccttttcta aaattgaagc taaaacatca
     4681 tcttctatgt tagataaaat attctctaaa tctgcgcttg atttaatttt aaagaattct
     4741 tttgtttgag aatggtatac aagagaaggt ttatttagct gtaaaagttc tgctatatta
     4801 tttaatgaac caatactctt accatcccat aaaataaagc cataatcagc aatttctgcc
     4861 attttcttat cttttgctgt ataaaatacc cttccagttc ctttgctgtc tacttggaca
     4921 aactgccaat tccccacatt atttcggtaa attttgccag aaaagtaaat atgcacatta
     4981 gcataatctt gttcttgtag aaatttttgg atagctttat cagccccatt agcatctcca
     5041 ataacaatat caaaattatt gctaagaata ttgttaattc tttctcgtat ttgtggattt
     5101 agtcgtgaaa tgctgcgtga accagaaaag aaaatagtgc gcatttttat cctctagtct
     5161 ttgtcattgc taaaacaatt acagatctag cattttttga aaacaatttt tcagttgata
     5221 tttccaatgt tgctccgcta tcaaataaat catcaattac taaaatattc ttattggata
     5281 gatctatatt gtcaattgtg atggaattat tcagtatttc tagtttttct gatttttctt
     5341 caatattttt gagtggtgtg tgtgagctag attttcttaa aataggagaa tatggaatat
     5401 tcaagcgatc acttagttct ttggcaatta attgaactgg ttgattaata cgctctgttg
     5461 taaaaggggc gggaacaatt aaatttatag attctaaacc actaaatttt tgtaaaatat
     5521 agtctaccag caaagaaaca ttttgggttt gattacgata ttttaattga taaacccatt
     5581 ctccaatcac acttctcttg ctatcaaagt gaggatgccc taattcatca taacctaaca
     5641 aaatactttt ttgcatatga tggtctaaag caaatccttt tgtccagtta ccatttagtt
     5701 ctatcgccat ttcattgact ccttgtcaaa attaagtata acgagcaatc ctagcaagcc
     5761 gtagcccgca tgtagggtat gtgcggtacg cacgcacgcg ttcttcattt tccctgtaac
     5821 cccaacccac cgcatgcgcg ccttgcggca cacactctgc cgacggattc aaaggtcgtc
     5881 tgaaaaaacg ctcgcggcgt ttgttacatc tgccttgcga taaaggctgc ctgaaaaatt
     5941 cccactgttg atatttcggg cattctttct caaaccgcct gcaaccgcaa aatctgctga
     6001 aacctactcc ctcccccgtg ggggagggct ggggagaggg cattctccga atttcggcaa
     6061 cctttcctaa cactctaacc gccaagacac aagccttgcg gcttgttgcc ctctctctaa
     6121 cgctttccca cagggagaga ggacggggcg gctgttggaa ttaagggttc tgcaggaaaa
     6181 acaggttgtg cgggctgttt tttgtttttc agacggcctt tataaatgct caattcagtc
     6241 ggctttatcc tattattttc aataatccaa tcaaaatcag ccatctgcta tcgtgcagct
     6301 tgcttttcca attcttgcaa cacgagcagg atttctgtca gcacatcgtt tgtctgctgt
     6361 aaaatctcgt gattccaaaa ccgcagtacg gtaaagccca agctgttgag atatgccgtc
     6421 cgcgcgtggt cgtatgcggc ttgttctgtg tgctgccctc cgtctgcttc gacaatcaac
     6481 ttgggcgtta cgcacataaa atcaacaata tagtttccca tcggctgctg gcggcggaat
     6541 ttatagccgt tcagacggcc tgcccgcagg tgctgccaca attttgcttc cgcctcgctc
     6601 atttcttggc gcatggcttt ggcgcgttga tgcaggacgg ggttgtcggc ggttaaaagt
     6661 ttctcgtgcg tgctcattct gttgtcgggt tactgtttgt gtaagcctta cagtttgttg
     6721 ccctctctct gactctctcc catgggagag aggacgtggt ggcggttggg attaagggtt
     6781 ctgcaaggaa aacaggttgt gcaggctgct ttttattttt cagatgacct gaaacaacag
     6841 ctgcaaatct aagttgcctt tcaaatcgcc tgcaaccgca aaatctgctg caaccttctc
     6901 cctcccccgt gggggagggc tggggagagg gcattcttcg aatttcggca accttcccca
     6961 acaccctaac cgcccaaaca caagccttgc tgtttgttgc cctctctcta acgctttccc
     7021 acagggagac aggacggggc ggctgtagtg attaagggtt ttgcaaggaa aacaaggaaa
     7081 acaagttgta caggctgttt tttatttttc aagcgacctg aaatcaacgc ttgtaaatcc
     7141 aagtcgcttt tcaaactgcc tgcaaccgca aaatctgctg caacctaccc cctcccccgt
     7201 gggggagggc tggggagagg gcattttcca agttgcggca atctttccca aatcccttag
     7261 tcttctaaaa tacaagcctt acggttgttg ccaaatgaaa cttcttccat acccaaaact
     7321 tgcgtgtaaa acgcaatggt tcggtcaatg tcggcaacgg tcagtaccag atggtcgagt
     7381 gcgctaatct tcatttcccg ctttcttttt caggcggcgg cagtgccgtc tgaaagccat
     7441 tatgcccgtt ttgccgcttt catattgcca atgaatttgt caaacaaata gccgacatct
     7501 tgcggaccgg ggctggcttc ggggtggcct tggaagcaga acacaggttt gtcggtcagc
     7561 tcgatgcctt gcaaagtgtt gtcaaacaag gatttgtggg taatgcgtgc gttagcgggc
     7621 agggtgtcgg catcaacggc aaaaccgtgg ttttggctgg tgatgacgac tttgccgctg
     7681 tccaaatctt gcacagggtg gttcgcaccg tggtggctga agcgcatttt cagggttttc
     7741 gcgccgatag cgaggctgat gagctggtgt cccaagcaga tgccgaaaat cggtttgccg
     7801 ctttccatca gtttttgcac ggcttcgatg gcgtaggtgc aaggctcggg gtcgccgggg
     7861 ccgttggaca ggaacacgcc gtcgggattg agtgccaaca cgtcttgtgc gctcgtttgg
     7921 gcggggacga cggtcaggcg gcagccgcgc gaggcgagca tacgcaggat gttggttttc
     7981 acgccgaaat cgtaggcgac gacgtggtaa ggctgttcgt caggggtaac gaaacccttg
     8041 cccaattccc attcgccttc cgtccattcg taagtttccg tgcaggaaac ttcttttgcc
     8101 aagtctttgc cgaccatact gccgaacgcg gcgatgagtt cttgcgcttt ttcaaccgta
     8161 gcatccgcgc cggtcaagat cgcgccgcct tgcgcgcctt tttcacgcaa cagcgtggtc
     8221 aggcggcggg tgtcgatgtc ggcgatggcg acggttttgt tgcgtaccaa atagtcgtgc
     8281 aggctttcgg aggcacggaa gttgctgtgc aagagcggca ggtcgcggat aatcaggccg
     8341 gcggcgtaaa cgctgcggct ttcttcatct tcggcgttgg tgccggtgtt gccgatgtgg
     8401 gggtaggtga gggtaacgat ttgtttgcag taggacgggt cggtcaggat ttcctgatag
     8461 ccggtcatcg aagtattgaa cacgacttcg ccggaagtcg aaccttcgta accgattgat
     8521 gtgccgtgga atacgctgcc gtcagcgagg acgaggaggg cgggggtgct catgatggga
     8581 atcctgtttt taataaaatt cttgacaatg ccgtctgaag ggacttcggc agggggcatc
     8641 cggtcggaaa aatccggtca aaaaaaaaca cgccgcgcaa gatagacgcg taacgtgctt
     8701 ttcgggcaag tgcctatacc ctgaaagcag catattttaa gacgaaacat acccgatttc
     8761 aagcgcaaac gcggcaggcg ggctgatatg ttcgcgcgaa aacggaaatc cgtggcgtaa
     8821 aaccgcccgc tctgcgccca ctatgcccgt tacgcatttc cccacgtccg tccggcgaaa
     8881 ctatgggaat acccgaa
//
LOCUS       DAXHKG010000083         8824 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.083, whole genome shotgun sequence.
ACCESSION   DAXHKG010000083 DAXHKG010000000
VERSION     DAXHKG010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8824
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.083"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            179..1354
                     /locus_tag="ACFMWP_001449"
     CDS             179..1354
                     /locus_tag="ACFMWP_001449"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HFC5892033.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(1565..2113)
                     /locus_tag="ACFMWP_001450"
     CDS             complement(1565..2113)
                     /locus_tag="ACFMWP_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HFC5892034.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNTESK"
     gene            complement(2116..3612)
                     /gene="ccoG"
                     /locus_tag="ACFMWP_001451"
     CDS             complement(2116..3612)
                     /gene="ccoG"
                     /locus_tag="ACFMWP_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HFC5892035.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            4140..6119
                     /gene="tkt"
                     /locus_tag="ACFMWP_001452"
     CDS             4140..6119
                     /gene="tkt"
                     /locus_tag="ACFMWP_001452"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HFC5892036.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEKGAKLEAEWDKLFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DGYVQTALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIINGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYVISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDTAYQAAVLPEGLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKEFGFTVDNVVDTVKSVL"
     gene            6267..7655
                     /gene="fumC"
                     /locus_tag="ACFMWP_001453"
     CDS             6267..7655
                     /gene="fumC"
                     /locus_tag="ACFMWP_001453"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HFC5892037.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7720..8643)
                     /locus_tag="ACFMWP_001454"
     CDS             complement(7720..8643)
                     /locus_tag="ACFMWP_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC5892038.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKWRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAKPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
BASE COUNT         2230 a         2537 c         2161 g         1896 t
ORIGIN      
        1 cactataata ttttctctcc cgattgaaac aggcgtaaca gaatatgccc gaagctccgg
       61 ctgctttctt gtttaccgcc gcgatattta gagtataata ccaaatttga gcaatagttc
      121 taaaacagtt agaaccattt ttcatgagcc tgactgattc gtacactcgg agaaactgat
      181 gcagaatatt tttgaccctt tggttattcg tggaaaatcc cttaccccca tcgtgcaagg
      241 cggtatgggg gtcggtgttt ccgcatcggg tttatccagc gcggtggcgc gtgaaaacgg
      301 tatcggaacg attgccagtg tggatttgcg ccaccttcac gaagacctac tcgccgaatc
      361 acaaatcaat ccgagtgaag agaaatatac atctttgaac tgtaccgcat tagacaggga
      421 aatccaaaaa gccaaaagcg cttcagaggg aaaaggactg attgcggtca acgtgatgaa
      481 ggcggtcaaa gaccacgccg cgtatgtccg ccaggcttgc gaatcagggg cggatgcggt
      541 tgtaatgggt gccggcctgc ctttagacct gccggaaatg accgagggct atcataaaga
      601 tgtcgcgctg ctgccgattc tgtccgaatc gcgcggtatt aatatcgtct tgaaacgttg
      661 gatgaaaaaa ggcatattgc ccgatgcgat tgtagtcgaa catcctgccc acgcggccgg
      721 acatttgggt gcatcaaccg ttgaaggcgt aaacgatgcc aagttcgact tcaaacgcgt
      781 gattgaggaa acgtttgaag ttttcaaaag tttagggctg gaaagcgaaa aaatcccgct
      841 tattcttgcg ggaggcatgg caaattttga aaaagtcaaa accgccctaa agaactgggg
      901 agcatccgcc gttcaaatcg gtacggcttt tgccgttacc gaagaaggag atgcacacct
      961 taacttcaaa aaaacgctcg ccggtgcgga aactgaaaaa gtagtcgaat ttatgtctgt
     1021 tgccggtttg ccggcgcgcg gtgtccgcac caaattccta gacagctaca tcaagcgtga
     1081 aagcaaactt cagacaaacg ccaaagccga cccgcgccgc tgtacccaag gtttaaactg
     1141 cctaaccagt tgcggtctgc gcgacgggct ttccaaagca ggacagttct gtattgatat
     1201 ccagcttgcc gccgcattcc gtggagaagt agataaaggc ctgttcttca gaggtaaaga
     1261 cccgctgccc ttcggcaatg ccatccgcac cgtccgcgag acgatacaat atctgctgac
     1321 ggggagcgaa cctgttgcaa cgctcggacg ctgacatcag gtaggatttg atttgcaaac
     1381 aaaatgccgt ctgaagggct ttcagacggc gtttttcagg ctgcgttccg gaatagtgtt
     1441 aaaaaataaa cgggatgaga tacatttatt ttcgtccgac aaatcaaacc atcgcgccga
     1501 atgatcaaat aatgcctgca cggcattaca tctggcaaag caatgcaatg aaaacacggc
     1561 ttttttattt gctttcagta ttattgaaaa gcttgtccat cggggtcaaa tcgaccgcat
     1621 tgccttggct ggtaatccat ttgttctcga cgcgccacac gcctgccgcg tcctccacgc
     1681 gcacatacca gtggttggtc ggcgaaaggg ttttgaacac cgcctcatat tccgccctgc
     1741 cgttctgcgc gctgccgacg ggcttgaggg cgacggtttg atcgtccgcc ttgcgggtcg
     1801 ggtgcatcag cagcaggttc aaaggctgtt tgccgtcaaa ctcgccgccg acaaacactt
     1861 ttgccgcatt catatcgggg gaaatgagaa cctgcacccc gatatgccgt ctgacggctt
     1921 cttcatcccg atgaagctgg atgtcgatat gtttgccgtc tttataataa tcgtccgtaa
     1981 ccaaatctgt cgcgtgctgc tgcgcgacaa aaaacatagc gacgctggcg atgacgacaa
     2041 aaatcggccc cgccatcaag atccacggcc agacgtgttt gtaccaaggt ttgattggag
     2101 tgttttgaga cacggttatt ctccgataaa ggttgcatct tcttccaaga cgaccggctt
     2161 gccgtcgggc gcgccgcttt cgcggtattg gaaggtaaat tcgatagggt ggctgccttt
     2221 gtccgcgtat tccggaatgg tggacacttg gacgggaagg gttaccgttt cgcgcggggc
     2281 aaccttgata ccgccttcgg gcagcccggt cagggcgatt tcgtcaaagc ctttgacact
     2341 tgcggtaatg agctgttctt tttcactttt gttgatgata cgcaggctgt atgcgttttc
     2401 cagccagcct ttggcgtttt cgcgcaccag tacgccacgg tctttcaaaa tatcgacctc
     2461 gaccattttg cgcgtggaca aaccggccag gaaggcaatg ataactaacg ccaacaccgc
     2521 gccgtaacct gccacgcgcg gtctgagcag ccgtttttta atgtcttttt cagaatattc
     2581 gtgttccagc gcgctttcgg tcgtataacg gattaatccg cgcggatagc ccattttgtc
     2641 cataatctca tcgcacgcgt cgatacaggc ggcgcagccg atacattggt attgcagacc
     2701 gttgcggatg tcgatgccga cggggcagac ttggacgcac atcgcacagt tgatgcagtc
     2761 gcccaaaccc gcctcttcct tattgaccgt tttcttgcgc gcgccgcgcg gttcgccgcg
     2821 ttccgcgtca taagaaacaa tcagcgtgtc cttgtcgaac atcgcgcttt ggaaacgtgc
     2881 atacggacac atatgcaggc atactttttc acgcataatg tgggcgaaga agaaggtcat
     2941 aaagccataa aacgctgcgg caaacatcgc gccgccacct gctgctccag tgaataaatc
     3001 gggaacgaac tggcggatag ggacaaacca gcctgcaaac gtgatgcccg tccacgcgca
     3061 gacaaggaaa atcagcaggt atttggtggc tttgatgcgg attttagtga aattccacgg
     3121 cgatttttcc agtttcagcc gtttgtttct atcgccttcg accaggttgt caatccacag
     3181 cataatttcg gtgtaaaccg tttgcgggca ggaatagccg caccacagtc gccctgcaat
     3241 cgtcgtccac caaaacagcc cgaaggcgca aatcatcagc agcaaggcaa ggtaaatcaa
     3301 atcgcccacc cccaacgaca atccgaaaat gaagaaatgc cgttcgggga tattgaaaac
     3361 gacggcctgc ctgccgctcc agttgaacca cggaatgacg taaaacacaa actgcgtcgc
     3421 caatacggcg gcgatacgca gtttggcgaa ccgtccttcc gcctttttgg gatggatgcg
     3481 ttcgccttcg ggatggattt gaatcacgct ggctcgcgga tcgaatgttt tttttgcttt
     3541 cggcgcggct tttgtttgtt cggacgtgcc gattccggat gccggactgc cggcttggtt
     3601 ttccgtggtc attctgcatt ccttagattt ttgattgatg gtttgcccgt taccgccgcc
     3661 gtttgctttt cagacgtcat ttttcttgtt ttttaaggcg ttgtgtttca agttttgaga
     3721 aaatccgttt ttcccaaaat atatttccgc tattgtacaa ctttatgcgc cgtccggatg
     3781 tatggggcgg atacatttcc catccgcatc aaaacgcctg gattttacct taccgcccga
     3841 acaaaatccg aatacggtta aaaaaaaaga ctaaaaaaac cgacaccccc atatcggcag
     3901 aaccgacggc gcaagctcat aaacaaacgc tatcgacaat ccggcacaca atctataact
     3961 ttttatttca aaaggaataa tggcaggctt cgcccgcaaa tcgaaaatcc ttccccgcct
     4021 gtcccctgcc gccgccttcc cacgcgtccg cccttttctt gaaagcataa gcgaatcggg
     4081 cgataatcaa cgctttccga ttatccactt atctgaaaca ccagcaagga aaatacaaaa
     4141 tgtctcaact ggcaaacgca atccgcttcc tctcggccga tgccgttcaa aaagccaatt
     4201 ccggccaccc cggcgcgcct atgggtatgg cggaaatggc ggaaacattg tggacgaaat
     4261 tcctcaatca caaccccgcc aaccccaaat tctacaaccg cgaccgcttc gtcctctcca
     4321 acggccacgc gtctatgctg ttgtacagcc tgctgcacct gaccggctac aacctaagca
     4381 ttgaagactt gaaaaacttc cgccaactgc acagcaaaac ccccggccat cccgaatacg
     4441 gctacaccga cggcgtggaa accacgaccg gcccgttggg gcaagggatt gccaacgcgg
     4501 tgggtatggc attggcagaa aaaatccttg ccgccgaatt taataaagac ggtttgaaca
     4561 tcgtcgatca ttacacctac gtctttatgg gcgacggctg tctgatggaa ggcgtatcgc
     4621 acgaagcctg ttcgctcgcc ggcaccttgg gcttgggcaa actgattgtt ttatatgatg
     4681 acaacaatat ttccattgat ggtaaagtgg acggctggtt taccgaaaac atcccgcaac
     4741 gctttgaaag ctacggctgg cacgtcgttc ctaacgtaaa tggtcatgac accgccgcca
     4801 ttcaagccgc catcgaagcc gcacgtgccg aaaccggcaa accgtccatc atctgctgta
     4861 aaaccttaat cggcaaaggc agtgccaata aagaaggcag ccacaaaacc cacggcgcac
     4921 ctttgggtgc ggacgaaatc gaagccacgc gcaaacattt gggctggact taccctgcct
     4981 ttgaaatccc gcaagaaatt tacgatgcgt ggaatgccaa agaaaaaggc gcgaaactgg
     5041 aagccgaatg ggacaaactg ttcgcgcaat accaagccaa atatcctgcc gaagccgcag
     5101 aatttgtgcg ccgtatggat aaaaaactgc cggaaaactt tgacgggtac gttcagacgg
     5161 cattgaaaga agtgtgcgcc aaagccgaaa ccgtcgccac ccgcaaagcc agccaaaaca
     5221 gcatcgaaat cttggcaaaa gagctgcccg aactggtggg cggctctgcc gacctgaccc
     5281 cgtccaatct gaccgactgg tcaaacagcg tctccgttac ccgcgacaaa ggcggcaact
     5341 acatccacta cggcgtgcgc gagttcggca tgggtgcgat tataaacggc ttggtattgc
     5401 acggcggcgt gaaacccttt ggcgcgacct tcctgatgtt cagcgaatac gagcgcaacg
     5461 ccctgcgtat ggcggcactg atgaaaatca accccgtgtt cgtgttcacc cacgattcca
     5521 tcggtttggg cgaagacggc ccaacccacc agccgattga gcaaaccgcc accctgcgcc
     5581 tgattccgaa tatggacgta tggcggccgt gcgacaccgc cgaatccttg gtcgcttggg
     5641 cagaagccgt caaagccgcc gatcacccgt cctgcctgat tttcagccgt caaaacctga
     5701 aattccaagc gcgcagcgaa caacaactga acgacatcaa acgcggcggc tacgtcatca
     5761 gcgaagccca aggcaacgcc caagccgtca tcattgccac cggttccgaa gtcgagctgg
     5821 ctttggaagc gcaaaaagca ctcgccgcgc aaaacatcgc cgtgcgcgtc gtttccatgc
     5881 cgtccaccaa cgtattcgac cgccaagaca ccgcctatca agccgccgtc ctgcccgaag
     5941 gcctgccgcg cattgccgta gaagccggac acgccgacgg ctggtacaaa tacgtcggcc
     6001 tgaacggcgc agtcgtcggc atcaaccgct tcggcgaatc cgcccctgcc gatctgctgt
     6061 tcaaagaatt cggctttacc gtggacaatg tggtcgatac agtgaaatca gtgctgtaac
     6121 cccacaccta aacaaatgcc gtctgaaacc aattagggct tcagacggca tttgtttgcc
     6181 ctctctcctt gatacttcct cattcctcca atctccatta taatatttgc gaatcactct
     6241 tattcacatt tcaaaaggag aaacgtatga acacccgcac cgaacacgac accatgggca
     6301 atgtcgaagt cccgtccgaa gcctattggg gcgcgcagac ccagcgcagc cgcaacaatt
     6361 tcaaaatcgg cggcgaaacc ctgccgcagc cgctgattta tgctttggcg ctggtgaaaa
     6421 aagccgctgc cgcgaccaat gtttccctcg gcaggattaa gccggaacag gcggatttga
     6481 ttacgcaggc ggcggatgat gtgttgaacg gcaggcttga cggacagttt cctttagtgg
     6541 tttggcagac cggctccggc acgcagtcca atatgaacat gaacgaagtg ctggcgaacc
     6601 gcgccaacga aatcgccggt acgggtttgg cggcgtatca gcccgtccat cccaacgacc
     6661 atgtgaacca cgcgcaatcg accaacgacg cattcccgac cgccatccac gttgccgccg
     6721 cgattgaaat caaccgccac ctcatccccg ccgtaaaagc cctgcgcgac accttggaca
     6781 aaaaagccca agccttcgcc cccatcgtca aaatcggccg cacccacttg caggacgcga
     6841 cgccgctgac tttaggccaa gaattttccg gctacgtttc ccagctcgac cacggcttag
     6901 gccgtctgaa tgacgcgctt aaagacttgt atgaacttgc tttgggcggt acggcggtcg
     6961 gcacgggttt gaacagccat cccgaatacg ccgaaaaagc cgccgccaaa ctcgccgaat
     7021 tgtccggctt gccgtttgtc agcgcgccga acaaatttga agccttgggc ggacgcgatg
     7081 ccgccgttgc cgcttcgggc gcattgaaaa cgctggcggc aagcctgaat aaaatcgcca
     7141 acgacatccg ctggctggca agcggcccgc gctgcggttt gggcgaaatc aaaatccccg
     7201 aaaacgagcc gggttcgtcc atcatgccgg gcaaagtcaa cccgacccaa tgcgaagcga
     7261 tgaccatggt gtgctgccaa gtgttcggca acgacgttac catcggcatg gcgggcgcgt
     7321 cgggcaattt cgagctgaac gtctatatgc ccgttatcgc ctacaacctc ttgcaatcca
     7381 tccgcctgtt gggcgacgcg tgcaacagct tcaacgaaca ctgcgccgtc ggcatcgaac
     7441 ccgtaccgga aaaaatcgac tatttcctgc accattccct gatgctggtt actgcgttaa
     7501 accgtaaaat cggctacgaa aacgccgcca aagtcgccaa aaccgcctac aaaaacaaca
     7561 aatcgttgcg cgaaaccgcc gttgagttgg gcttgctgac gggcgaagaa tttgacgaac
     7621 tggtcgttcc tgccgatatg gttcatccgc gctaatcttt ccctcaaata aaatgccgtc
     7681 tgaaacctcg ttcagacggc attttccgtt gcctgcgaac tagcggcgtt tgaacagcct
     7741 gtcccccacc gccgccgtaa ccgcaccccc gaccacgacc agtgcgccaa cataacccaa
     7801 accgttcata tccggcgcgg caaaagtatc aggcatcaca taatgcccga gcaaagaaaa
     7861 tattacggta aacacgggga gcaaggttgt taccgcgctg actttggaag cctcccaatg
     7921 tttcaacgcc tcgccgaacg agccgtaacc gattaacgta ttcaagcagc aatacgcaaa
     7981 acaaacccac gccaacgtac cgtccaaact tccgatgtgt gccggtttgg caaacggcag
     8041 gaacacggcg gcacttgccg cataaatcaa cagcagaatc tgttgcggtc cgaattgcgc
     8101 cgacagcagc ttttgcgcca cggcataaca cacccatgcc atactgcctg ccgcacacag
     8161 caacacgccc ttcgcatacg cgcccaaacc cgacaactcg ccgaatttat cgttaaaaaa
     8221 cataagcaaa ccggcaagca gcaaaaccaa gccgattttc tgagcggcag tcatccggtc
     8281 tttaaacacc aacacaccga caacaatcat cgtaaacggc gaaatctgcc acaaaacctg
     8341 cgtcgtggtc ggcgaaatat aatgcagccc ttgggcaatc agcacaaagt ttgccgaaat
     8401 gcccgccacg ccgagcagca gcagcctgaa tgagcaccaa gaaaaatccc gccacttcgg
     8461 cagccgcccg cccaatgcca gcaaaacaaa caataccgcc gccgccacgg taaaacgcac
     8521 ccacaccagc gtcggcgcat cgacaaactt caatacctgc cgcacggcaa tcggcagcgt
     8581 tccccacgtc atcgccgcca aaagtgccaa cgcgaagcct aggagcggcc tttggttttc
     8641 catcctgatt ttcctatttt taaacaaccg tattgccgga cgatgccggt ttgccgcatc
     8701 gggcaatgat ggttcaagcg tttgacgttt gattccaacc ctttgatttc aaacaaaccg
     8761 gctgaagctc ggctattgct tcgcgctatt tgaaaacacc gcctgaattt taaaatatag
     8821 tgga
//
LOCUS       DAXHKG010000084         8781 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.084, whole genome shotgun sequence.
ACCESSION   DAXHKG010000084 DAXHKG010000000
VERSION     DAXHKG010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8781
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.084"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(520..1188)
                     /locus_tag="ACFMWP_001455"
     CDS             complement(520..1188)
                     /locus_tag="ACFMWP_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC5892039.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEEEAKEKGWPV
                     LNFK"
     gene            complement(1185..1853)
                     /gene="hda"
                     /locus_tag="ACFMWP_001456"
     CDS             complement(1185..1853)
                     /gene="hda"
                     /locus_tag="ACFMWP_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HFC5892040.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            complement(1958..2548)
                     /locus_tag="ACFMWP_001457"
                     /pseudo
     CDS             complement(1958..2548)
                     /locus_tag="ACFMWP_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743106.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(2506..2721)
                     /locus_tag="ACFMWP_001458"
     CDS             complement(2506..2721)
                     /locus_tag="ACFMWP_001458"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC5892041.1"
                     /translation="MRIGNDLFVKRVQRIPGKLLVTSENPRYAPFEIDLSNTQDDIAI
                     IGRVEWYGRSIPHRKTSLCSATTAKSC"
     gene            complement(2930..3829)
                     /locus_tag="ACFMWP_001459"
     CDS             complement(2930..3829)
                     /locus_tag="ACFMWP_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HFC5892042.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCGVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            3873..4124
                     /locus_tag="ACFMWP_001460"
     CDS             3873..4124
                     /locus_tag="ACFMWP_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC5892043.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            4126..6105
                     /locus_tag="ACFMWP_001461"
     CDS             4126..6105
                     /locus_tag="ACFMWP_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HFC5892044.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYQYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRSAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPGWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDGIAPDMLSA
                     QELATMFMPQEVRKVQRGWLDLFNNSYFSVELAEYHKDEVRVSYDLSDASAVNVFDMD
                     GKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQAAVW
                     DELGYLGGNVIEAEYAVLPKTGTDDGIFLFEADRS"
     gene            6141..7055
                     /locus_tag="ACFMWP_001462"
     CDS             6141..7055
                     /locus_tag="ACFMWP_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HFC5892045.1"
                     /translation="MKQINQALQQKLAEFKEKSGMSQTQLARGIGTSPASVSMYLNGT
                     YAEKGGNYETIEPKIEAFLEMQDSKAKREELVLGFVSTKTTRRIVEAMRNAHEGGEIS
                     VIYGQAGLGKTQAVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGHLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKYG
                     ELVQLHSRVAGALNLGDTMPDAELEQIARATLPEADDETIAELVKHSNGNTRRMSKLM
                     RGSVRVANKNGIRMQAGIVKKYSTLIIR"
     gene            7145..7411
                     /locus_tag="ACFMWP_001463"
     CDS             7145..7411
                     /locus_tag="ACFMWP_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892046.1"
                     /translation="MQVLKKVDWKMFVARSFWQCVPVGLTAGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            7520..7693
                     /locus_tag="ACFMWP_001464"
     CDS             7520..7693
                     /locus_tag="ACFMWP_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892047.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATARMAQKSREREIEEYQAQFEDKD
                     GKGRLKTEGNKDE"
     gene            7686..7853
                     /locus_tag="ACFMWP_001465"
     CDS             7686..7853
                     /locus_tag="ACFMWP_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892048.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            7917..8144
                     /locus_tag="ACFMWP_001466"
     CDS             7917..8144
                     /locus_tag="ACFMWP_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892049.1"
                     /translation="MKVYVFKISNENGKLKIELPEIPMGKQIDEVDLIAGLTTEFIAS
                     MLRDAQKDRRKFVIDASNQLAAIQTYQKIFN"
     gene            8159..8677
                     /locus_tag="ACFMWP_001467"
     CDS             8159..8677
                     /locus_tag="ACFMWP_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0042262 - DNA protection [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HFC5892050.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAKAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDTILNQKECFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
BASE COUNT         2262 a         1802 c         2517 g         2200 t
ORIGIN      
        1 gtatttacca tactaaattt aataggtctc attatcatat ttaataacca cttcatagta
       61 tagtggatta aatttaaacc agtacagcgt tgcctcgcct tgccgtacta tctgtactgt
      121 ctgcggcttt gtcgccttgt cctgattttt gttaatccac tataaatgca gagtgggtgg
      181 aaacactcac tttatggttt gctacgctct gctcaattag caacccgata acccaatatg
      241 gataataggg taattaatcc aatctaattt gtcagcatct gttaatttat tgcaaaataa
      301 agtattgaat tatgtcgggt gcaaatgacg aaatataagt ttccgtgcgg acggatcaag
      361 attcccactt tcgtgggaat gacggtggaa agattgttgt ttttcccgat gaattcctgt
      421 gttttttgtt tttccggata aattcctgtg gctttgagtt ttttggattt cagcctcaat
      481 gccgtctgaa cgccgaattg ggcttcagac ggcattgcgt catttgaaat ttaaaaccgg
      541 ccagcctttt tctttggctt cttcttccag ctcggcatcg gggttgacgg cgacgggttc
      601 gtcgacgagg cgcagcagcg gcaggtcgtt tttggagtcg ctgtaaaaat aggttttgcc
      661 gtagctttcg agcgtttcgc cgcgttcggc gagccattgg ttcaggcggg tgattttgcc
      721 ttctttgagg ctgggcgtgc cgatgtaatt gccggtgtag cggccgtcgg aaccggattc
      781 gagttgtgtg ccgatgatgt tggtaatgcc gaaaaggtgg cagacggggg tgatgatgaa
      841 ctcgttggtt gaggaaatca caagggtttc gtcgcctgcc atttggtggc tctgcactag
      901 catacgctgc ataggcgaga tgtgggggat gatgtattcc gccataaatt cgcggtgaaa
      961 ttccgccagc tcttctttgc tgtaacgggc gagcggggcg aggtggaatt tgaggaatgc
     1021 gtcgatgtcg aggcagccgt tttggtagtc gcggtagaat ttttcgtttt gcgcttcggt
     1081 ttcggcagcg tcaaccaagc cttttttgat gaggtattgc ggccaggcgt ggtcggaatc
     1141 ggtgttgatg agggtgttgt cgaggtcgaa gatggcgagg tttttcattg ggtttcctgt
     1201 tgtttcaaaa gctggcgcaa aagcggcagg gtgatgcgtt tgcccatcgt gacggcgtag
     1261 ttgtccagcg tgtcgagcat catcatcagg ctgtccatat cgcgccgcca gtgtttgagc
     1321 aggtattcga aaatttcgga atcaacggtt acttggcgtg ccgccgccat actggcgagc
     1381 gcgtcgattt tttcttggtc ggtcaggggt ttgacttcgt aaacgaggca gtaagccata
     1441 cgcgtccgca aatcttcgcg gatgacgagc tgctggggcg tgtattccga accgagcagc
     1501 aaaaagcctt tgccgctgtt gcggaagcgg ttgaagatgg aaaaaagcag ggcttgttct
     1561 tcgttgccca gcttttcgac ttgatcgacg gcgaggtatt ccgcctcgaa cgcggcatcg
     1621 gtcagcggca tggaggcggc atcgatatag gcggcgtttt tgccggcttc gagcgcctgt
     1681 gcgacccacg cctgcaaaag atggcttttg cccgcgcctt cttcgcccca aacataaatg
     1741 aattgtccgt gtttgtgtcg gaggacatag accagttccg cgttttccgt gccgaggaat
     1801 ttgtcgaaac tcggatagtc gtgtgcggca aagtcgaaaa taagctggtt cacggttcgg
     1861 cattccgagg ggtggtaaac gggtttattg tacgttgttt tcgcgcgcct ttccaatttg
     1921 aacgatgccg tctgaaaacg gcttcagacg gcatcgttca gtcgcaggca acgttgccga
     1981 cattgaggtg catattgtgg aacgtgttga gcgtgcttcg gtgtccgatg ctgatgatga
     2041 tgctgtcggg cagtttttgc tttaaggcgc ggtagagtgc ggcttcggcc ggttcgtcca
     2101 aggcggcggt ggcttcgtcg agcaggacga ttttgggctt ggaaagcagg gcgcggacga
     2161 aggcgacgcg ttgcagttcg ccaggggaga gtttgtgctg ccagtcggct gttttgtcca
     2221 atttgtcaat cagataaccc aagcggcagg tgttcatggc ttcggctaac tcgggatgct
     2281 gtttgtcgat gtccggataa caaaccgcgt cgcgtaggct gccttgcgcc gtgtacgggc
     2341 gttgcggcag gaagaggatg tcttgatgcg gcggacggct gactttgccg ctgctgccga
     2401 acggccaaag cccagccagc gcgcacagca acgaagtttt gccgcaaccg ctcgggccgc
     2461 gtatcagcag ggaatcgccg cttttgagtt tgatgttgat gccgctcaac aggatttcgc
     2521 cgttgtggcg gaacagagcg acgttttcct gtggggaata ctccggccat accactcaac
     2581 acggcctatg atggcgatgt cgtcttgggt attactcaaa tctatttcaa acggtgcgta
     2641 acgtggattt tcagacgtta caagcagttt gcccggtata cgttgcacac gtttgacaaa
     2701 gaggtcattg cctatacgca agacatatag gccgtcgcgc ggctcggttt cggcgtggtt
     2761 gattagaatg tttataaaag gctttaacta gaaactgaac atggaacttg tataatagtt
     2821 ccatgtttga aaaaatcttt taatatcata catctaaaaa aacaaagcat ctgaagacca
     2881 taagctaaac atgaaacttg aatttaaagg cggagtttca tgtttaagcc tattttttcc
     2941 gttttttagt cgatactgct gcatatgttt tttgcaaatc ttcatcactt aattcagtca
     3001 ggctttctac tgagaaattt ttttcgaggt aacttttcaa ccaatcttca agctcaagct
     3061 gttttacatt taatttgata taagcgtatt tcttttttcg ccagtcggga tcgttgttct
     3121 ttgatgttgc tgtattgctc aacctaccca gccattttct gagataagtt tctgctttgt
     3181 cgtaatcgct caatgcgatt agtttgtaac ttggaacttt acagtgagca ttcagactag
     3241 cccaaattgc acggattgat tttggcgacc gtttggcaat ctcttctgct gcggcaactt
     3301 gtttaacaag ttgttgcagc tttgaagctt gctcaagcgt tatatgttcc ttgccgggtt
     3361 ttgaatcgac acgggttctg atgacgtgat tttgggtatt aatttgatga acaaccgaac
     3421 cagatgaggc gataacagcg ttactgacgt tgccgttaat ctgattctca acgtttgatt
     3481 tgccaatagc gtcgtccaat tttttattaa ggtcgtctga aacagcattt aaatttgccg
     3541 aatgaatgcc tgtaaagaca aattgaatat ccacccctaa ttggacagca gcaagtaaaa
     3601 agtccgcagg aatgttgacc tgcccgcttt catacagtct caaactttct gcactacatc
     3661 cagtttgctc agcaaaattc tttcgagagt atccaagtcg gcttctctct tcaactaaat
     3721 tcaatgctaa atcaatgcgt tccataaaaa caccgcaaaa tattaccaaa tatatttggt
     3781 ataccaaata ttttgtgtat atcatccaag taacagttaa ggcaggcatt aaagcctgta
     3841 aggtaagtaa tggattctat catggaggca ttatgcaagc gaacgaaatc tataaatcct
     3901 tagaagaaaa aaatatatcg gcaagaatgt tggcttcggc tttaggggta actaaccaat
     3961 ctgtttctga ggtcataaga aatggacgag gaagcaaaag aattgcggag gcaatcgcga
     4021 aagtgattca aaaagattta gttgaagttt ttccgcatta caagaaaaca gattgtcgag
     4081 acaaaaagat agctgaattg aaagagatgc tcggagtggg ttgaaatgga atatatggat
     4141 ctcaaaagcc tgcttaattt tgggttgcca aatatgccaa gaacagtaat agggctgaga
     4201 aaaaaagcgc aaagggatgg ttggcaaacg agaaggcgtc aaggtaaggg tggtggtgtt
     4261 gaatatgccc tccctgccga aatccgagca gccatcatga aacggcagtc ggacgagctg
     4321 gcggagaaga tgccgaaaac cctgccccaa gtcagaccgg ggacggcgat gtcggctcag
     4381 gcactggctg aagcggccaa gctgttgaac gagaaacaac ggtcggtggc ggatgcgcga
     4441 tgtgcggtgg tggcggcggt gttggggatt aaataccaat acgattgctc tgccaaggct
     4501 gcggtggctc agtttttggg cttgctggca gaaggtaaat tggacgcggt cacgcttggg
     4561 aacttggaaa aggccaatga ccgcagccgg tcggcgaagg ttggcgaacg tactttagac
     4621 ggctggattt ctgcttattt gaaagcggaa aacgcgacgg agcggttggt tgctttggct
     4681 ccgaagacga cgaaggcggt caagccgatt gaaagttacg gatggttgcc gatgtttatg
     4741 cagtttcaca atattccgtc cgcgccaaag ctggcgcaca gctaccgccg gtttgtgcag
     4801 tgggcggaag cggaaaatat gccggtcaat gatgtgccta acttgagtat ggtgcggcgc
     4861 gtttgggaca agctgccgct gattatgcag gagcgcggca ggaaaacggg ggcggcttat
     4921 aaatcgctgc tgccttatgt gaaacgtgat tggggggctt tgaagccgaa cgatgtttgg
     4981 atcggcgacg gccacagctt taaggcgaag gtggctcatc cggtacacgg caggccgttt
     5041 aagccggaag tgacggtgat tattgatggt tgtacgcggt ttgtggtggg tttttcggtg
     5101 tcgttggctg aaagttgtgt ggcggtatcg gacgctctgc gtatcggggt caagcacttt
     5161 ggtttgccga ttatctacta ctcggataac ggtggcggcc aaaccggcaa gacgatagac
     5221 catgaaatca cgggtattac gtcccgattg ggtatccggc atgaaacggg tatcgcgggc
     5281 aacccgcaag gccgaggcat catcgagcga tggtggaaag acaatctgat tgagatggcg
     5341 cgccagtatg agacgtttgc gggcgcgggg atggacagca gtaccaagaa cctgatgtac
     5401 cgcaagatgg aaagtgcgtt taacgctttg gaaaaaggca aggatttgac ggaggaacaa
     5461 cagaaatatt tgaaaaaact gccgggctgg tcgcgtttta tcgcggatgt ggtcaagtgt
     5521 atcgacgaat acaacaaccg cccgcacggc gagctgcccc gacatccgga cggcgggcat
     5581 tattcgccga aggcttatcg ggaaatgagg ctggaacagg acggtatcgc gccggatatg
     5641 ttgtcggcgc aagagctggc gacgatgttt atgccgcaag aggtgcgaaa ggtacagcgc
     5701 ggttggctgg atttgttcaa caactcttat ttttcggtgg agctggcgga gtatcacaaa
     5761 gacgaggtac gggtcagcta cgatttgagc gatgcgtcgg cggtcaatgt gtttgatatg
     5821 gacggcaagt ttatcactaa ggcgcaggcc aacggcaata cccgcgaggc tttcccgacg
     5881 gctcgtatcg accaactggc ggaaaaacgc cgaaaaggca aaatcaagcg ggcggaaaat
     5941 gcaatcaagc tcgcaaatgc agaagtcaat cctgctttgg aacaggctgc ggtttgggac
     6001 gagctgggat atttgggcgg aaacgtcatc gaggcggagt atgcggtatt gccgaaaacg
     6061 ggcacggacg acgggatttt cttgtttgag gcggatagaa gttaaaacgg ttttaaacct
     6121 cttttaaaag gactaaaaaa atgaaacaaa tcaatcaagc attgcaacaa aaactggctg
     6181 aatttaaaga aaaatcgggt atgagccaaa cccaactggc acgcggtatc ggtacttcgc
     6241 cggcatccgt cagtatgtat ctgaacggta cttatgcgga aaaaggcggc aattatgaaa
     6301 ccatcgagcc aaaaatcgag gcgtttttgg agatgcagga cagcaaagcg aaacgcgaag
     6361 agctggtgtt gggttttgta tcgactaaga cgacacgccg aatcgtggaa gcgatgcgca
     6421 atgcgcacga aggcggcgag atttccgtta tctacggtca ggcgggtttg ggcaagacgc
     6481 aggcggtcaa aaactactgc gagaaaaacc ctgcagccat cttgattgag gctaatccga
     6541 gctttacggc tttggtcttg atgcgcaagt tggcgacggc ggcgaaggta tcggcgatgg
     6601 gcagcttgaa tgatttgttt gaatcggtat cggacagatt gcgtgattca ggccatctga
     6661 ttgtggtcga tgaagcggaa aacctgccat tacgcgccct tgagattatc cgccgactgc
     6721 acgatgagac tggctgcggt ttggtgttga gcggtatgcc ccgactggtg gcgaatttgc
     6781 gcggtaagta tggcgagttg gtacagcttc acagtcgtgt ggcgggtgcg ctgaatctag
     6841 gtgatacgat gcccgacgca gagttggaac agattgcgcg ggcaacccta cccgaagccg
     6901 atgatgaaac gattgcggaa ctggttaagc atagcaatgg taatacacgg cgtatgagca
     6961 agttgatgcg cggatcagta cgggtagcga ataaaaacgg tattcgaatg caagcgggaa
     7021 tcgtgaaaaa atattcgaca ttgattatcc gataggccgt ctgaaacggt aagtctctga
     7081 cagggctata tattttttac cctatgattt taataagtta ttgttttcta aaggaaaact
     7141 caaaatgcaa gttttgaaga aagttgattg gaagatgttt gtggcacgct ctttttggca
     7201 gtgtgtgccg gttggtttga cggcgggcgt gtggtgtttt gtggcgggaa tggcgttgca
     7261 ttcctgcgcg aaagaacccg aaccggttgc gaaagagccg acgaaggttg aggcgatgga
     7321 aagacaggcg gatttggagg tcaaggtatg ggaagggcaa tacgagtcaa tgagcgtcga
     7381 ggaaaaaatg aaagggattg tttatgagtg ataagccaat tttattgagc cctgcggcga
     7441 aaaaagaggc tttggcacgg gcggtaaagg aaatccgcgc gaaatatggc gataaggcga
     7501 ttgtgaaagg atgtgtgaaa tgagtttcgg acgacgtaat acggattggc aggcttgggg
     7561 acaacaccgc aggcgtgcga cggcgcgaat ggcgcaaaaa agccgggagc gcgaaatcga
     7621 ggaatatcag gcgcagtttg aagataagga cggcaaaggt cgtctgaaaa cggaaggaaa
     7681 caaagatgaa tgaaaaagat ttaatcgaat ggctcgaaga ccgtggcgag ctgatggtca
     7741 tgaagaagga cggcgaaggc tttgtgattg cagcgcgtgc gccggacggg atgtggaaga
     7801 ctgccgaggc ggaaactttg gctcaggcga taactttatg ggaggaagtg tgatgtttaa
     7861 gtttttgaga aaccgcgcga aagttgaagc aattttaaac aagaaaggaa agtgaaatga
     7921 aagtgtatgt ttttaaaatt agtaatgaaa acggtaagtt aaagatagaa ctccccgaaa
     7981 tcccaatggg taagcaaatt gacgaagttg atttgattgc tgggctaacc acggaattta
     8041 ttgcaagtat gttacgtgat gcccaaaaag atcgtcgcaa attcgtaatc gacgcatcaa
     8101 atcaattggc tgcaatccag acatatcaaa aaatcttcaa ttaaggaagg aagagaaaat
     8161 ggctaaaacc cgaatcaaac agcccgccat cgaagcggca caagacaaaa cggaagttac
     8221 tgcatttatc cgccaaatcg gcgacttgca gcgcgaagtc aaacgcctgg aaaccgaagc
     8281 cggagacaaa aaagcggcta tcgaagaaga atatgccgcc aaagccgcgc cgatgtgtgc
     8341 cgaaatcatg agcctgaccg aacgtgtggc cgcctactgc gaagcgcata aggacgagct
     8401 gacggaaaat ggtaaaacca aaaccgtgga ctttaccacc ggcctgatta aatggcgcat
     8461 ccgtccgcca tctgtcaagg taacgggcgt ggccgccgtc ctggcgtggc tctcggaaaa
     8521 atccgccttt gccgagtttg tccgcactaa aaaggaaatc gacaaagaca ccatcctgaa
     8581 tcaaaaagag tgtttttcag acggccaagt tccggggatt aagattgtga gcggcgtgga
     8641 ggattttgtg attgagccga gcgaacaaat tctataaaat caacagcctg atttcaattc
     8701 agtgtgttga aacgtgattg agcctacgga gcaggagctt gcctagccgg ttcaaatagg
     8761 ctttaaccca tgatttaaag g
//
LOCUS       DAXHKG010000085         8603 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.085, whole genome shotgun sequence.
ACCESSION   DAXHKG010000085 DAXHKG010000000
VERSION     DAXHKG010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.085"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="ACFMWP_001468"
     CDS             complement(280..3132)
                     /gene="gcvP"
                     /locus_tag="ACFMWP_001468"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HFC5892051.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDEFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVSDFAKADDGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDAFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGINVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDTFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTAGYRELLADMENSLKSITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIVHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKEDNPLVNAPHTASDVTGEWAHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3163..3522)
                     /locus_tag="ACFMWP_001469"
     CDS             complement(3163..3522)
                     /locus_tag="ACFMWP_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892052.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRASLMAMLPL
                     FVVILVLLNIVFPLLAHPLAWLVPAGFMVLVGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCCPCPNHPMSKNSA"
     gene            3521..3700
                     /locus_tag="ACFMWP_001470"
     CDS             3521..3700
                     /locus_tag="ACFMWP_001470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFC5892053.1"
                     /translation="MPSEPAGRLFQKTPYRRNFMRLYGVGFALQTAYASRSSLVFQSV
                     HDYINNLGADKPLFI"
     gene            complement(3693..4334)
                     /locus_tag="ACFMWP_001471"
     CDS             complement(3693..4334)
                     /locus_tag="ACFMWP_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HFC5892054.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(4324..4875)
                     /locus_tag="ACFMWP_001472"
     CDS             complement(4324..4875)
                     /locus_tag="ACFMWP_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HFC5892055.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLNWTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(4879..5397)
                     /locus_tag="ACFMWP_001473"
     CDS             complement(4879..5397)
                     /locus_tag="ACFMWP_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HFC5892056.1"
                     /translation="MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFIPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5397..7037)
                     /gene="pqiB"
                     /locus_tag="ACFMWP_001474"
     CDS             complement(5397..7037)
                     /gene="pqiB"
                     /locus_tag="ACFMWP_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HFC5892057.1"
                     /translation="MTDNSPPPNGHAQAHVRKNNTFLSAVWLVPLIALIAGGWLWIKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN
                     ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQ
                     SLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(7030..8490)
                     /locus_tag="ACFMWP_001475"
     CDS             complement(7030..8490)
                     /locus_tag="ACFMWP_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HFC5892058.1"
                     /translation="MGSAVGGQPLEKIFLPDDKGLFILPNLPVLHPDWVYRLFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
     gene            complement(8393..>8603)
                     /locus_tag="ACFMWP_001476"
     CDS             complement(8393..>8603)
                     /locus_tag="ACFMWP_001476"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892059.1"
                     /translation="IKNHKRNLLSHIFGKNIICVMFLSRYFTILYRIGILSNGFGSRR
                     TAARKNIFAGRQGFVHTAEPAGFAS"
BASE COUNT         1926 a         2199 c         2432 g         2046 t
ORIGIN      
        1 gaggcaacgc tgtactggtt tttgttaatc cactatattt gtttgtccgt gtggaaatga
       61 catcaaaggg tgtgaatagg cttttcatct ttgaaatctg tttgcacgat cggatgaata
      121 aaaagtagga tgataaaaaa gctgatgtat ggatactggt ttaactcatt tgttttaaag
      181 ttatagtcga gatacgtgta ttggtgcaac cagtctgccg ttgacgaaaa tgccgtctga
      241 aaatgtttca gacggcattt gtcttcgggg tttcaacggt cagtcttcat aattttccat
      301 cggtgggcag ctgcacacga gattgcggtc gccgtacacg tcgtccacac ggttgacgct
      361 cggccagaat ttgtgttcgc ggacgaatgg caacggaaag acggcttctt cacgggagta
      421 cggatgcgcc cattcgccgg ttacatcgga tgcggtatgc ggagcgttga ccagcggatt
      481 gtcctctttc ggccattcgc cgcgcccgac tttcagcact tcctgtttga tttgtttcag
      541 ggcggcgatg aagcggtcga gttcggcttt gctttcgctc tcggtcggct cgatcatcag
      601 cgtaccggca acggggaagg aaaccgtcgg ggcgtggaag ccgtagtcca tcaggcgttt
      661 ggcgatgtcg gtttcagtga tgccgctttc ggctttgagc ggacgcaaat cgacgataca
      721 ttcatgcgcg acgcggccgt ttttgcctgt atacagaatc ggatagtctt cgctcaggcg
      781 tttggcaacg tagttggcgt tgagcaatgc ccagcgtgtc gcctgttcca tgccttgttt
      841 gcccatcatg gtcaggtaca tccaagtaat cggcagtatg gacgcagaac cgaaggccgc
      901 agcagcaacg gcggtttggt cggcactggc gctgtgggtg tcggtcaaag cgtgtcccgg
      961 tgcgaacgga gccagatggg ctttcaagcc aatcggaccc atgcccggac cgccgccgcc
     1021 gtgagggata cagaaggttt tgtgcaggtt catgtgcaac acgtccgcgc cgacttcggc
     1081 aggctgcatg atgccgattt gggcgttgag gttggcgccg tccatgtaaa cctgtccgcc
     1141 gttttcatgg acgatgcggc agatgtcgcg gatgccttct tcgtacacgc cgtgggtgga
     1201 cggataggta atcatgatgg cggacaaagc gtcgcggtgt tgctcggctt tggctttcaa
     1261 atcgtcgatg ttgacgttgc cgtgttcgtc ggtatcgacg acgacgactt tcaaaccgag
     1321 catggcggcg gtggcggggt tggtgccgtg ggcggatttg ggaatcagac agatgttgcg
     1381 ctgcgcttcg ccttgcgctt cctgatagcg gcggatggca agcataccgc tgtattcgcc
     1441 ctgcgcgccg gagttgggct ggaaggaaat tgcatcaaaa ccggtgatgg atttcaggct
     1501 gttttccata tcggcgagca attcgcggta gccggcggtt tgcgcttcag gagcgtaagg
     1561 atggatgtcg gagaactccg cccaagtaat cggcaacatt tccgcagtcg cgttgagttt
     1621 catggtgcag ctgcccaatg aaatcatgct gcggttcatc gccaagtcgc ggtcttcgag
     1681 ttttttcagg tagcgcagca tttcgtgttc ggtgtggtaa cggttgaaca cgggatgttg
     1741 cagaatgtcg tcttgacgca gcagttcggc gttcagacgg cctttgacat catcggcaaa
     1801 tgcgaacgta tccttgccgg taaacgcgcg gtacaaatca accaaatctt cgcatgccga
     1861 tgtttcgtgg aatgcagccg caacttgagt atcgttaacg cggcgcaggt tatagcccga
     1921 ttccaaagca gcggcaaaca cttggtctgc tttctctttg ttgccgaaat cgacggtaac
     1981 ggtatcgaag aagactttgt gaaccacatt aatgccgtct gaaaccagcg catcggcaaa
     2041 agcagaagcc agcgcgtgaa tgcggttggc gatgcgtttc acgccttcag ggccgtggta
     2101 aacggcatac atacccgcca aattcgccag caatgcttgt gcggtacaaa tattggacgt
     2161 ggctttttcg cggcggatgt gttgctcgcg ggtggacaac gccatgcgca aggcaggttt
     2221 gcctgatgcg tctttggata cgccgatgat gcggccaggg gcggaacgtt tgaacgcgtc
     2281 tttaaacgcg aaataagcgg cgtgcggccc gccgaagccc ataggcacgc cgaaacgttg
     2341 ggtgttgccc aaagcaatat ccgctcccaa ttcggcaggt gatttcagta aaaccaagct
     2401 catgatgtcg gcggcaacag caacgatcgt gccttttgct ttcagacgac cgataacatc
     2461 ctgcaagtct tgcacatcgc cgtctttgcc gacgtattgg aacagcgcgc cgaagtattc
     2521 gccgtcatcc gctttggcaa aatcgctgac caccagctcg aagccgaaat atttggcgcg
     2581 ggttttcatc acgtccaaag tttgcggata cacgcgcgca tccacaaaga aacgctcgga
     2641 tttcaccttg cccacgcggt gcgccatcgc catcgcttca gccgcagcag ttgcctcgtc
     2701 cagcaaagac gcgcccgcca cagggaaacc ggtcaaatcg atacacactt gttggaagtt
     2761 taacaacgct tccaaacgac cctgggcaat ttccgcctga tacggcgtgt aggcggtgta
     2821 ccaacccgga ttttccaaca cgttgcgcaa aatcacgttc ggcacgcggg tcgggtaata
     2881 gcccaaaccg atataggact tgttgatcac gtttttcgac gcaatgcctt tcaatttcgc
     2941 caacgcgtcc gcttcggtca gggcatcggg caaatcgagt tcggacggca tacggatgct
     3001 ttgcggcacg gtattgccga caaattcgtc catgcttttc tcgccgacag cggcaagcaa
     3061 cgccgcttcg tcgccgaaac tcaaatggcg cgcggcaaat tcgttcgggt tgaacaattc
     3121 agatagtttc atttctactc cttcgggttt gtagggctgc catcaggcag aatttttaga
     3181 catcggatga ttcgggcaag ggcagcacaa aagacgggat aatggcggac aatgcgccag
     3241 aatgcagcag gtcaggacaa gcagcgccac aagcggcagc gataagggaa agccgccgac
     3301 caaaaccatg aaacctgcag gcaccagcca agccaaggga tgcgccagaa gcggaaaaac
     3361 aatattgagc agaaccaaaa tcacaacaaa cagcggcagc atcgccatca ggctggcacg
     3421 cctgtatgtt gcgtacgggt cggatgcttc ttcaggttcg caatattcca tgatttcagc
     3481 ctgtcctggc tttatccaca gcaggctcgg acggtcggtc atgccgtccg aaccggcagg
     3541 ccgtcttttt caaaaaacgc cataccgccg caacttcatg cggctgtatg gcgtaggttt
     3601 tgcacttcag acggcatatg cgtcccgaag cagtttggtg ttccagtcgg ttcatgatta
     3661 tataaacaac ttgggtgcgg ataaaccttt gtttatctaa acccctgttt tctcaaaaat
     3721 tgattcaaat cttcggcaaa tttccgatag cctttgccgt tggcgtggat ttggtcggat
     3781 ttcagattat tatcgcccaa aatttccgcc cacgcgccgc cgaacagcgg aatgccgtat
     3841 tcctcggaca aatcctcata cagcggatga tcgctcaaat gcccgaacaa cgcgcccagt
     3901 gtgatgtgcg gcacgccgac gaggacggcg gggatgtttt ccttctgcac ggtttcgatg
     3961 attttcgcga tattggcgcg ggtctgctcc ttgggaactt tgcgcagaaa gtcgttgccg
     4021 cctatgccga caatcacaag cttgggtttg cgtgccaaca gcgcgggcag gcgcgacagg
     4081 gcttgggcgg atgtatcgcc cgatacgccg ccgttgacaa tattccaacc cgtcagtttt
     4141 tgcagttgcg cggggtagga ttcgccaggg tttgcgccgt agccgaaggt aagcgaatcg
     4201 cccaaggcaa gtacggtgct tccttcggga attttggcgt gggttcgggc ggattttctg
     4261 ccgcaggcgg taaggagcaa cgcgcctgcg ccgaggagga aggttcttct gttcattggt
     4321 ttttcagatg gcatcgagcc atttcgggtg gtatttcagg gtttcacggt aaaccggaca
     4381 gctttcggcg tgcgcgcctt tgaggtagcc ggtactcatc agaaattcgc cgacgatttc
     4441 gccgccgacg aatttgaaat gttttttaaa gagtttaacc cattcgtctt tgcttcgcgg
     4501 atggtgcgtg tcgagccagt tcttgaacga gccgtattct tgttgcaacg cttggatttg
     4561 ccgtgcattg aaaatggcgg catcgatttt caggcggttg cggacaatgc ccgcgtcggc
     4621 aagcaggcgt tcgcggtcgg tgtcgtcgaa ggcggcaacc gtatcgatgt cgaaaccttc
     4681 aaatgccgtc tgaaacgcct gccgcttctt cagcatcagc gtccagttta atcctgcctg
     4741 attgatttcc aacaccagcc gctcaaacaa ttcattgtcg tcctcaatcg gaaaaccgta
     4801 ttgcgtgtcg tggtaatgtt tgttcgggtt atcggtgttt tcgggaagtg aggcggcaaa
     4861 ttcgcaatag ttcacgtttt actcgaccat ctgttgcgcc gcctgtttca gtccctgttc
     4921 gagtgcggcg gtcatcgcgg cgtagccgtc accctgctgt tcggtttcga tatggaaggg
     4981 tctgttcgta ccgtcgggta ggacggcgta gccgctgatg agggttttgc ccgtgtagct
     5041 gccttggaat gcgtcaatat agaccgtcca tttttcggta ctgccgctgc gtgaggcagg
     5101 aataaagatg cgtgtgctgt ccaaacggtt gaatgcattg ctcaacgccg cttcgagcat
     5161 atcgtccaag gtgtccgccc aaacgtggtt ttgtgcggtg ttgaggcggt aggggtcggt
     5221 ttgatagacc agtccgccgc gtttgagcgg ttcggcaaga cggacttcga cggcagtttc
     5281 gccgccttgc gttgcaggac ggatgtagcg gctgtcgggc aacacgaaat attgtgtgct
     5341 ttgcacagta ccgcaggcgg caagcgacag ggcggcggca atcgggaaaa ggcgcattat
     5401 cggcttcctt tcgggatagg gtctttgctg ctgctgttga aaatcagcgc gttgggtttt
     5461 tctttcaaag tgttaatgac gggttgaacg tcttttaagg ttttgtccaa actttgcagc
     5521 gtattttgta cgtcgccgta gataggcgat tgcggcgata cgccttgcag ggttgtgcgc
     5581 aactctttca gggtttggtt caactcgttc ggaatgtttt gcgtttgcgg attattgctt
     5641 agcgtgttaa tggatttcag cgtggatttg agttcggcga gcgaagcgtt taaacctgaa
     5701 acggttttgt ctaaaggcag tttgccgaat ttgtccagca aatccgccaa tttgacctgt
     5761 aagtcgtcca aaccgccgcc ttgtgtagcg atgacggtat cgtctgcata aacggtatgc
     5821 ggtcgcagct tgggcgaaga cgaaggctga tcgttcaact caatcatttt gctgccggtc
     5881 agcaggttgt tgctggagat ggtggcggtc aggcctttgt ttaaagccgt ctgaaattgt
     5941 tgtttccaat gctctttgct ttgttcgtcg gcattgattt ccaaacggga aggctcgatg
     6001 cggatgcgta cgggaatcca gccgttttca aataaatgca ggctgtcgtt gcggtcaaaa
     6061 taagggacat cggaaaccac gccgacattc agccctttgt actcgacggg cgaaccgacg
     6121 gtcaggccgc gcacggattg tttgaaaaac gcggtgtagt acagcgagcg gtcgtcaggc
     6181 aggttggcga cttcgctgcg gctgtcgtaa agcgtgaagc tgtcttcgct tttgacgttt
     6241 ttactgtttt tggttttcgg cgaatcaaat gaaatcgcgc ccgacagcag ggcaggcaga
     6301 ggggcggaat tgagtttgat gccgctgcct gtggtttcga tattgatgcc gctttccagc
     6361 caaaaacggc tggcggaatg aatcagtttg tcgttggggc tttggatgaa gatggtgtaa
     6421 tgcacgcttt ggtcggacgg gtcgaaatgc gcgctttcga cttgcccgac cataaagttt
     6481 tcatacaaaa cagggctgtt gacgttgagg atgcggtcgt ttttaccaat caaattcaag
     6541 cgcagcccgc tttgcccgat ggcggtaacg ggcggaatgt cctgcacttg gaacacgtct
     6601 tttgcctcgt cgcttttgcc gggtgtaaaa gcgatgtacg aacccgaaag cagcgtaccc
     6661 aaaccggtta cgccgctttg gtcgatacgc ggcttgacca cccaaaactg ggtatcgctg
     6721 cggatgaggc cggatacgtc cgcattgagt tgggcggtta cttccacgcc tttttggtcg
     6781 tcgcgcagtt tgattcgggt aacgcgtccg acatcgatgc tcaatacttt gatgaccgta
     6841 ttgttgacct caatgccttc cgcgctgtcc atcaagagcg taaccacagg ccccctgttg
     6901 cggatttcct taatccacag ccagccgccg gcaatcagcg cgatcagcgg aaccagccag
     6961 acggcagaga ggaaggtgtt gtttttgcgg acgtgtgctt gggcgtgtcc gtttggagga
     7021 gggctgttgt cagtcatgtt tttccgtttc gttgaaagca atgccgtctg aagcgcgttt
     7081 gtcccaaagc aggcgcgggt cgaaataata ggcggacagc atcgtcagaa tcacgaccag
     7141 gcagaaatag actgccgcac tgcccggaat gacgcgcgcg gcataagtgt ggaacgaaca
     7201 cattaaaata ataatcacaa aaatatcaat catcgaccag cggccgaccg cttcggtgat
     7261 gcggtagagg tgtgacaatt tctttgcgcc tgtcggcaaa gcgaagcggg cggacgcaat
     7321 taaaaccgac attgccgcaa tcttcagcac cggcaccaaa atactcgcgc tgaaaataac
     7381 cgccgcaatc agcctgtcgc cctcgtccca catataagcg atgccgttaa ggatggtatt
     7441 gacctccgtg gcggcaggat tggacgaaat cataatcggc aggatattgg cagggaaata
     7501 caaaataacc gccgccgtca gaaacgccga cgaaatactc agacttttcg gccgtcggcg
     7561 gtacagttcc gcgccgcaca caccgcaggg ggattcggca ctgtcgcgga aatacaggca
     7621 gcggctgcaa caggttttgc cttccgatgc cgtctgaacc gcattatccc ccgtcagccg
     7681 cccgatttga aaatacaccc aatgctgggg aacggatacc gaagtccgaa tcagcataac
     7741 cgacagcgcg aacatcagat aaaacgccga cccgaagcga acctctgcca cagacgagag
     7801 cttgatatac gccaccagcg tggaaacaaa aaacacatcc accatcatcg cctgcctcaa
     7861 gcgcaccatc acacgcgttg ccaaacgcag cgcaggatac acccgtttcc gtatcagcgc
     7921 ggcatagaca tacaggcaca gcagcagaaa cagaaccggc gcgccgaagg tcagcacaaa
     7981 catcacttcg gccaaaaaac cataatcctg aaacaccatc aggcgcatca tctcgggcag
     8041 cgaaaggacg gatgccgcac ccggtatccc gacctcgata tacgtcatac cgtaagcaaa
     8101 cgccatcaaa atcagcgaag ccgccgcata agcgggcggg gcggaaaaag gatgcctgcc
     8161 caccctgaag agcttatagc cgcagcgcgg gcagaacgcc gcctcccccc tgtccaaccg
     8221 aggcacatcc gcgcggcagc cgcattccgg gcaatctacc gtatgcggcg gtagggcttc
     8281 gtcgcggcag ttgccgcgaa ggctgtgggg gatattttcg gcaaacggct tcatcgggaa
     8341 agtggcaaat ataagtggcg gcattataaa ggaaaaaagg cgatacaccc aatcaggatg
     8401 caaaaccggc aggttcggca gtatgaacaa acccttgtcg tccggcaaaa atattttttc
     8461 gagcggctgt ccgccgactg ccgaacccat ttgataaaat cccgattctg taaagaatag
     8521 taaaatacct gcttaaaaac atcacgcaaa tgatattttt tccaaaaata tgtgataata
     8581 aatttcgttt atgattcttt att
//
LOCUS       DAXHKG010000086         8500 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.086, whole genome shotgun sequence.
ACCESSION   DAXHKG010000086 DAXHKG010000000
VERSION     DAXHKG010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8500
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.086"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            83..1267
                     /gene="coaBC"
                     /locus_tag="ACFMWP_001477"
     CDS             83..1267
                     /gene="coaBC"
                     /locus_tag="ACFMWP_001477"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HFC5892060.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1334..3490)
                     /locus_tag="ACFMWP_001478"
     CDS             complement(1334..3490)
                     /locus_tag="ACFMWP_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HFC5892061.1"
                     /translation="MPVPQPTAPYDHLTAEARTLLFRTASYLKPEEQVELEKAVAYAF
                     HAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDSCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLDQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3583..3789)
                     /gene="rpoZ"
                     /locus_tag="ACFMWP_001479"
     CDS             complement(3583..3789)
                     /gene="rpoZ"
                     /locus_tag="ACFMWP_001479"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HFC5892062.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="ACFMWP_001480"
     CDS             complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="ACFMWP_001480"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HFC5892063.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4593..5192
                     /locus_tag="ACFMWP_001481"
     CDS             4593..5192
                     /locus_tag="ACFMWP_001481"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HFC5892064.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5238..6026)
                     /locus_tag="ACFMWP_001482"
     CDS             complement(5238..6026)
                     /locus_tag="ACFMWP_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HFC5892065.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVHEVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPSVDEDGVLRGLQDLGVI"
     gene            6351..7706
                     /gene="yegQ"
                     /locus_tag="ACFMWP_001483"
     CDS             6351..7706
                     /gene="yegQ"
                     /locus_tag="ACFMWP_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HFC5892066.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLNVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDARLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHHTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPNGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMRGKEKALIARVLN
                     P"
     gene            7840..8316
                     /locus_tag="ACFMWP_001484"
     CDS             7840..8316
                     /locus_tag="ACFMWP_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HFC5892067.1"
                     /translation="MPAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CSNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRSVTGFHSYFDKQPLQGGQYDCQTGSFHVRVVMRANVVR"
BASE COUNT         2165 a         2327 c         1998 g         2010 t
ORIGIN      
        1 ttgtatccaa acggtatcta atgtatccac actttgttat agaatggctg ctgttttttc
       61 ttcgtaatta gaaattgtca aaatgggcaa acatattctt ttaggtgtaa cgggcagtat
      121 tgcggcgtat aagtcttgcg agttggttcg tctgctgaaa aaacaggggc attcggttac
      181 ggtggttatg agccgctcgg caactgaatt tgtttctccg ctgacttttc aggctttaag
      241 cggcaatcct gtcctgaccg acacgcacgg cggcaacggt tcaaacggta tggaacatat
      301 caacctgacc cggaatgcgg atgtttttct gattgcgccg gcaagtatga ataccgtggc
      361 aaaaatctgt aacggcgtgg cagataacct actgaccagt ctggcagccg cacggaaatg
      421 tccgcttgcc atcgctcccg cgatgaatgt ggaaatgtgg ctcaaccctg ccaaccaacg
      481 gaatatcgca caactggttt cagacggcat tactgtctat atgccgggct tgggcgaaca
      541 ggcttgcgga gaaaatggca tgggaaggat gccggaacct gccgaattgc tggatttgct
      601 tccggacttg tggacaccga aaattttaag gggcaagaaa atcttgatta ccgcaggtgc
      661 gacatttgaa gccattgacc ctgtcagggg catcacaaat acctccagcg gaaaaatggg
      721 ggtagctttg gcgcgggcgt gccgtgccgc cggtgcggaa gtcagcctga ttcacggaca
      781 gcttcaaacc gcgctgcctt tcggcatatc cgatacggtt caagccgtca gcgctgaaga
      841 tatgcatcgc gcagtgcatc gtttgattga aaaacaagat gcttttattt ctgttgccgc
      901 cgtctcagac tataaggtta aaaacaggag tacacaaaaa ttcaaaaaag ataaaaatgc
      961 caaaccgtta tccatcgaat tggatgagaa ccccgatatt ttggcttcta ttgcctcatt
     1021 gccgaacccg ccgttctgca tcggttttgc cgctgaaacg gagaatgtaa tggcatatgc
     1081 acgagaaaaa cgtattaaga aaaaaatacc ggtgatagtt gccaatgatg tttcaatcgc
     1141 gatgggcaaa ccgaccaacc ggattaccat tatcggggac gacggggaac tatcttttcc
     1201 cgaaacaagt aaagatgaag cggcgatgca gattgttgaa aggcttgccg tatatttgaa
     1261 caaataagca attgaacgga taaaccataa aacgggttgc ctgttaatca aaaggcaacc
     1321 cgttttacct gcttcaactt ctgatgactt tgcggatata tggaatacta tgcagatttt
     1381 gaataatctg attcaactga tccaaattct tgactttcaa taagaatttg aattcgacaa
     1441 aaccttccgt tcccgactgg gatttagacg gtgtttcgac cgactcgatg tccgcaccgg
     1501 aatcggaaat cgcttgcgcc attaatgcca acaggccgtg gctgtcttcc gattggactt
     1561 gaagcccgac acggtagttc tgcccgttca tattttccca gtctgcatcc agctgctgtt
     1621 cgggatcgga cttcaacaac gtcgggcagc tatccctatg gataatcatg ccttttccct
     1681 taaccaacag caaacggatg gaatcgccgg gaacagggtg gcagcactct gcaaaatgaa
     1741 tatgcccgct ttcctgacca tcgactttaa tggaactgag cctgacctcg ctgccgaaat
     1801 gctcccctgc caactcagca atgtgcatgg cgacataaac aggcagggta tgccccatcc
     1861 ctacgttgta cagcacttct tcaaacgatg tctgcttgtc gttgagatcg gcaagatatt
     1921 tttccttgat gccgtctgaa agcaggacat ctttgggcag caaactggac agggcttttt
     1981 gtaagaggct ctctcccaaa acgaccgcat cgtgccggtt aaggttttta atatattggc
     2041 gtatggcact gcgcgccctg ccggacacgg cgaaattcaa ccacgcggga ttgggtttgg
     2101 cgtgttcgga tgtgataatt tcaacagaat caccggtttt gagcttcgta cgcaacggca
     2161 tcatgatatt gttgatacgt gcggcaacgg ttttgtgccc gatatcggta tgcaccgcat
     2221 aagcaaaatc gacaggcgtt gcccctttgg gcaaagttag gatttttcct tttggcgtaa
     2281 ggatgtagat ttcgttcgga aacaaatcga ctttgacgtg ttcgagaaac tcaatggcat
     2341 tggcactgct tgcctgcaaa tctaagatat ttttcagcca ccggtttgtg tgaagcaccg
     2401 cctgatcgac cgtcttagaa tatgatttat agctccaatg tccggcgatt ccaccttcgg
     2461 caacagcatc catttccttg gtacgtatct gaacttcaat cggcaagccg taagggccga
     2521 ccaaagtcgt atgcagactt tgatacccgt tgcttttcgg aatggcgata tagtctttga
     2581 accgcccggg cttgggctga tagagggtgt gcaatgcgcc gagtgcggca taacaggctg
     2641 gaatgctgtt gacaatgacg cggaaaccgt aaatatccat aacctcggca aagcgcagct
     2701 ttttcgccat cattttctga tggatgccgt acaggttttt ttccctgcct ttgattttgg
     2761 cctctatatt cgcgcctacc agccgctggc cgaatgcgcg caagactttg ccgacaacgt
     2821 cctgccggtt cttccggctc ttgtccatcg ctttttttaa agtctcgtag cggttgggat
     2881 gcaggttttg gaacgataaa tcctgaagct cttgatatgc gttattcaaa cctatacggt
     2941 tggcaatctg tgcatagatt tcaagggttt cccttgcaat ccggcggcgt ttgtccgggc
     3001 gcatcgaacc gagtgtccgc atattatgca gacggtcggc aagtttaacg acaatcacgc
     3061 gcacatcttt ggtcattgcc aaaatcagtt tgcggaaact ctccgcctga tgttccgcat
     3121 gatcttcaaa tttgagtttt tcgagtttgg acagaccgtc caccatctcg gcaatcgtat
     3181 tgccgaacac cgccgccatt tccccttttg tcacgcccgt atcttccaat acgtcgtgca
     3241 tcacgcctgc acacagaccc tgtatgtcca tatgccaaag ggcgagctgc gtcgcaacgg
     3301 caattggatg cgtaatgtat ggttcgccac ttttccgggt ttgtccgtca tgagcgtgaa
     3361 atgcataggc aacggccttc tcgagctcaa cctgttcttc aggcttgaga taggaagcgg
     3421 tacggaaaag caaggtgcgt gcttcggcag ttaaatggtc gtaaggtgcg gtgggttgag
     3481 ggacaggcat ttcagacggc tttcggaaca tattttattt ttcgtttcaa accgtcggac
     3541 tgcacggcgg cagaatgtgc cgacgtgcgt ttccggcaga atttatttat tgcgcgtcaa
     3601 cagttccgta ccgatatgcc cggcggcgat ttcccttaag gcggtaacgg tcggtttgtt
     3661 attgcggaca tcgtccacaa gcggcgtatt gccattttca agctggcggg cccgacgggc
     3721 cgctaccaat gtcaggtcaa aatggttgga aatttttccg gtacagtctt cggtggtaat
     3781 acgtgccata ttatttgctt tctttcaaaa atatttaaaa taggaaactg ggtattttcg
     3841 cggtttttta ggaattttcc aacaaatctg caataaatcc cagttgccgc gaccttttca
     3901 gacggcaggc attcacaata tggcgcaaat cctcctccgc ccgcgccaag tcatcattga
     3961 ccacgacaaa atcgaacaat acggactgtt cgatttcatg ccttgccttc gacagcctcc
     4021 tttggataac ttcccgactg tccgtcccgc gtccgttcag acgtgcagca agcacatcga
     4081 aagacggcgg caggataaag atgccgacgg cttccggcag cgcgttgcga acctgcgccg
     4141 cgccctgaac gtcgatttcc aaaattacgt catagcctgc cgccgccaac gcattcacgc
     4201 cctccgcgct tgtgccgtaa tagttgccga acacgtctgc gtattccaaa aaagcttcct
     4261 gcgcgataag cgactcaaac tcttctttag aaacaaaatg ataatgtacg ccgtttactt
     4321 cgccttcacg cggcggacgc gtcgtgtgcg atacggaaac gcgcaaaccg ttatggtttg
     4381 ccaacagccg cgacaccagc gtggttttgc ccgtgccgga agcggccgaa atgataaaga
     4441 tgttgccttt tcgataagcg gacatatttt ttacctgtat attttccagc cgattgtatc
     4501 acaacggaca ctcggtttcc tatttgccga tgcccatatt ttgccgctat tgttttgatt
     4561 gatttggcaa gcggcaggct gacggctaca atatggcgtt aaaaacatca aacttggaac
     4621 acgcaatgct ggttcatccc gaagctatga gtgtcggcgc gcttgccgac aaaatccgca
     4681 aaatcgaaaa ctggccgcaa aaaggcatct tattccacga catcacgccc gtcctgcaaa
     4741 gcgcggaata cttccgactt ttggttgatt tattggttta ccgctatatg gatcagaaaa
     4801 tcgacatcgt tgccggtttg gacgcgcgcg gcttcattat cggcgcggca ctcgcctacc
     4861 atctcaacgt cggttttgtc cccatccgca aaaaaggcaa gctgcctttt gaaaccgtat
     4921 cgcaaagcta cgcgctcgaa tacggggaag ctgcggtgga aatccacacc gatgccgtca
     4981 aacccggttc gcgcgtgctg ctggtcgatg atttggttgc cacgggcggc acaatgcttg
     5041 ccgggctgga actgatccgc aaactcggcg gagaaattgt cgaagctgcc gctattttgg
     5101 aatttaccga ccttcaaggc ggcaagaata tccgtgcaag cggcgcgccc ttatttaccc
     5161 tgcttcaaaa cgaaggctgt atgaagggct gaaaaccgac cctgccgtct gaaaccggca
     5221 gggttgttat tatgcgttca aatcacgccc aaatcttgca agcccctcaa cacgccgtct
     5281 tcatcaacgc tggggcaaac atatttcgcc gcttctttcg ccgcctgttc cccgttgccc
     5341 attgccacgc cgaacccgac ttcagacagc atttccacat cgttcaaacc atcgccgaac
     5401 gccatcacgt ccgccatttc caaacccaat gcttcaacca cgcttctgat gccgtctgtt
     5461 ttcgacgcac ccgcaggcag cagatcgacc gcttcctcat gccagcgcac cgttttcaag
     5521 ccttcccgtt ccacaatatc cgaccaaagc ggcatttcgt tttcctccgc aaacaccagc
     5581 atctgataca ccggtttgct tgaaaaataa tccttatcgg caaaaaaatc gctggcgata
     5641 tgcttcaagg cgcggcacac gcattccgac agtgcggaca ccgcaatccc ctctccgccg
     5701 acaaacgcat aatccatgcc caagccatcc aaatgcgcgc aaaccctgcc catcaaaccg
     5761 gcatccatcg gtacttcgtg cacagttttt ccgtgcagca gcgcaaactg tccgtttatc
     5821 gttaccacgg catccatacc cgtttccgcc atcatgtccc tgaccttttc gggaatcgtc
     5881 gccaaagacc gccccgttgc caacgccgtc aatatacctt tgccgcgcaa agccgccacc
     5941 gccgttttca cggaaggacg caaggtatcc gtatatttgc ggtacagcgt atcgtcaata
     6001 tcgaaaaaca cgattttggg attcatcaca ttctctctcg cattcaaatt gccgcattgt
     6061 atcccaagca ggcaaatact tgataaatcc ttataaattt cccggcaaaa ttgaccgcga
     6121 acacgaaaag gcggataatc cgcccatcct caaacccttt tcagacggca tttgcagcaa
     6181 tgccgtctga aacattttta caaagcacac aaatcatgtt tcaacacaca ggacgacaca
     6241 taaagcgtcg ccctatatgt tgccctgatt cggaaagggt tacacccctc ccaaataaag
     6301 tctgattcta ccgccctaaa gggcggggtt tcaaccgaaa aggaaacacg atgaaagcac
     6361 ccgaactctt attgcccgcc ggcggattgg aaagaatgcg cgccgcctac gattacggcg
     6421 cagatgccgt ttacgccggc agcccgcgtt actccctgcg cgcccgcaac aacgaatttg
     6481 ccaaactcaa cgtccttgag caaggcatta aagaagcgca cgagcgcaac aaaaaattct
     6541 ttttgaccgt caacaccctg ccgcacaact ccaaactcaa aacctttgtt tccgatatgg
     6601 aacccttgat tgccatgaaa cccgacgcgc tgattatggc ggatccgggt ttgatcatga
     6661 ccgtgcgcga aaaatggccg gaaatgccga tccacctgtc cgtacaagcc aacaccacca
     6721 actactgggg cgtgaaattc tggcagaata tcggcgtcga acgcatcatc ctgtcgcgcg
     6781 aattgagtat ggaagaaatc gccgaaatcc gccaacaatg ccccgacatc gaactcgaag
     6841 tcttcattca cggcgcattg tgcatcgcct actccggccg ttgcctactc tccggctact
     6901 tcaaccaccg cgaccccaac caaggcacct gcaccaactc ctgccgttgg gactacaaag
     6961 tccacaacgc tacggaaagc gatgcgggcg atgcccggct tctgcaaggt ttcaactttg
     7021 aaaaagccca agaagaagcc aaccaaaact ttgaaggcat caacggtcaa aaacgccatc
     7081 cctacgccga caaggttttc ctgattgaag aatccaaccg tccgggcgag atgatgccga
     7141 ttatggaaga cgaacacggc acctacatca tgaactccaa agaccttcgt ggcattgaag
     7201 tggttgagaa actcgccaaa atcggcgtgg acagcctcaa agtcgaaggc cgcaccaagt
     7261 cgctctatta tgtcgcacgc gtcgcccaat cctaccgcaa agcgattgac gatgccgtcg
     7321 caggccgtcc gtttgattac agcctgttga gcgaactcga aggccttgcc aaccgcggct
     7381 acaccagcgg cttcctcgaa cgccaccaca ctcaggatta tcaaaactac ctgaccggcc
     7441 attccaccgc caaacaaagc caatacgtcg gacacgttac cgaaatcgac aaaaacggct
     7501 gggcgaccat cgaagttaaa aaccgctttg ccgtcggcga ttcgctcgaa atcatccacc
     7561 cgaacggcaa ccaaaccatc aaattggaac aaatgacccg caaaggccaa cctgtcgatg
     7621 tcgcacccgg caacggcatc caggtcaaaa tccccaatat gcggggcaaa gaaaaagccc
     7681 tcatcgcacg cgtgttgaac ccctgagcca caatgccgtc cgaaccccgt tttcagacgg
     7741 cattttgttg aatcttacgg tacaatggca atgatttccc acagcaaaca aggacatccg
     7801 acatgaaaaa aaatcctcat actctccgcc gccgccctga tgccggcagt ctgccaatcc
     7861 ggcagcgcac ctaaaaacgc gcacacggca tccgccggca caccggccgg agaatcatgc
     7921 aaagtcatcc gggacgacac cgcaggaagc ggcaaaaaca tcatttaccg ttgcagcaac
     7981 ggtcaggcgg caataaatgc agccattgca gacggcgtat tggaatcagg gattcccgtc
     8041 agcttcggcg gcgggggcgt accggttgca aacggcagga atctggttac acggcaagca
     8101 gcaaacggcg ttggcaaatc cgactccgag gcctgcgaac acgccctaat caatgccgcc
     8161 cgcaaattcc agcagaccgc aggcaaactc ggcgggcgca gtgttaccgg cttccacagc
     8221 tacttcgaca agcagccgct gcaaggcggg caatacgact gtcagacagg ttcgttccac
     8281 gtccgcgtgg tcatgcgcgc caatgtcgtc cgttaacata tcggcaatca aaaaattagg
     8341 ctgtgtttta gtaatctgtt gatttcaatt atttgcaaag gaaaagacaa ttattttttc
     8401 ggttaggaag agacctatcc tattgaatac atttaagtta aatacgtcta tcaacactat
     8461 attatagtgg attaacaaaa atcaggacaa ggcgacgaag
//
LOCUS       DAXHKG010000087         8301 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.087, whole genome shotgun sequence.
ACCESSION   DAXHKG010000087 DAXHKG010000000
VERSION     DAXHKG010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8301
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.087"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(167..1246)
                     /gene="apbC"
                     /locus_tag="ACFMWP_001485"
     CDS             complement(167..1246)
                     /gene="apbC"
                     /locus_tag="ACFMWP_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HFC5892068.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSIDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALSIADKGKDFSSRFPKIVVE"
     gene            1457..1532
                     /locus_tag="ACFMWP_001486"
     tRNA            1457..1532
                     /locus_tag="ACFMWP_001486"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1490..1492,aa:Lys,seq:ttt)
     gene            1611..2120
                     /locus_tag="ACFMWP_001487"
     CDS             1611..2120
                     /locus_tag="ACFMWP_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HFC5892069.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWVRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDRTVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSA
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            2463..2903
                     /gene="nadR"
                     /locus_tag="ACFMWP_001488"
     CDS             2463..2903
                     /gene="nadR"
                     /locus_tag="ACFMWP_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HFC5892070.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            3018..3518
                     /gene="hpaC"
                     /locus_tag="ACFMWP_001489"
     CDS             3018..3518
                     /gene="hpaC"
                     /locus_tag="ACFMWP_001489"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HFC5892071.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINMLADEHQDVAEHFAGLTNLSPEERFAY
                     HIWHYGKTGQPEIEGALAHLHGHIVGQHEIGTHFVFYVRLDEIKNCVGKRPALLYFRR
                     QFRSLD"
     gene            3536..4231
                     /gene="murU"
                     /locus_tag="ACFMWP_001490"
     CDS             3536..4231
                     /gene="murU"
                     /locus_tag="ACFMWP_001490"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HFC5892072.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(4462..4893)
                     /locus_tag="ACFMWP_001491"
     CDS             complement(4462..4893)
                     /locus_tag="ACFMWP_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC5892073.1"
                     /translation="MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPID
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            5068..6744
                     /locus_tag="ACFMWP_001492"
     CDS             5068..6744
                     /locus_tag="ACFMWP_001492"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HFC5892074.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSSGAGFIVALCGNMMKMPGLPKVPAAEKIDVDAEGVIHGLF"
     gene            6858..7949
                     /gene="ychF"
                     /locus_tag="ACFMWP_001493"
     CDS             6858..7949
                     /gene="ychF"
                     /locus_tag="ACFMWP_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HFC5892075.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LERLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            7987..>8301
                     /locus_tag="ACFMWP_001494"
     CDS             7987..>8301
                     /locus_tag="ACFMWP_001494"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892076.1"
                     /translation="MPSEVGFGGFRRFHTAGMRLHQNKIPPAFPICPPRFLQNKPPAP
                     LLQKAVRHSEYPEPRYKMTFQTAFAPPRFEYSGLTLNQDKATKPQTVQIVRQGEATPY
                     WFK"
BASE COUNT         1872 a         2117 c         2396 g         1916 t
ORIGIN      
        1 ccgcaatctc aaatcccgtc attcccacga acctacattc cgtcattccc acgaaagtgg
       61 gaatccggaa cgtaaaatct caaaaaaacc gttttatccg gcaagtttgc ccgccggcag
      121 gcgcggggct tgggacggca ttgctgttgc ggtttcggac gcggctttat tcgacgacga
      181 ttttggggaa gcggctgctg aagtctttgc ctttgtcggc aatgctcagg gcgatttgga
      241 atgcggcatc ggtgtagatt cgggcgatgg cggggtgttc gtcgaacagt tgcgccggtg
      301 tgccgccgtc catggcttcg cgcacgggca ggcttagggg aagctgtccg agcaggggga
      361 cgttgaggcg ggccgccaaa tctttgccgc cgtccgtgcc gaacagtgct tcgctatgcc
      421 cgcagttgga gcagatgtgg acggacatgt tttccaatac gcctaaaatg ggaatgttga
      481 ccttgcggaa catatccaca gccttgcgcg cgtctatcag ggcgatgtcc tgcggcgtgg
      541 ttacgatgac cgatccggtt acggggatgc gttgggacag cgtgagttgg atgtcgcccg
      601 tgccgggggg caggtcgatg aaaagataat ccacttcgtc ccactcgctt tgaaacatca
      661 gttgctgcaa ggcttggctg accatcggcc cgcgccagac gacggcttgg tcggtatcga
      721 cgagaaagcc gatagacatg acctgtatgc cgtctgaaga ttcgacggga atgagttttt
      781 ggtttttctg atcgggtttg cggtcgtcca cacccaacat ggtcggttgg ctcgggccgt
      841 aaaggtcggc atcgagcacg ccgacgcgcg cgcccatccg cgccattgcg gcggcaaggt
      901 tggcggtggt tgttgatttg cccacgccgc ctttgccgga ggcgacggca atgatgtttt
      961 tcacaccttt gatggtggta acgccgggct ggactttgtg tgtgccgatt tcggtgtcta
     1021 tggacagatg gatgtgtgtg tcgcctgtca gcggcatcag gatttcctgt atgcggtcgg
     1081 ctgtttctga ggcaatgtgc gcgacgggga agccgaaatg cagggcgata tggatgccgt
     1141 ctgaacgctg ttcgaccgaa cggacggcct tttcgccgcc gagcgtgcgt gccgtattcg
     1201 gaacggcgac ggtgtcgagg agggtgcgga tgttttgtat gttcataatg tgtgtttctg
     1261 tgtgcagttt gggaaacggg cggaaagtgt acattgattt cgggcggttt gcttttcctt
     1321 gtgcgaactt ttacacggta tgcggcggat tgtgaaaatc cgttgtcaaa atatcccgtg
     1381 caaacagtgg tctgcaatta agcctgtaaa atttgcttga cgaggtagga tggtgctgta
     1441 taatgcacgg cttatcgggt cgttagctca gccggtagag cagcggactt ttaatccgtt
     1501 ggtcgagcgt tcgaatcgct cacgacccac cagataaccg gaagccaagt tttgagactt
     1561 ggctttttgt ttgcctgccg gttgcgcggg cgtaccgttt gagagagcgt atgaaaaaga
     1621 aactgctttc gggcatcaaa tttgccgttc agacggcatt ggtgttttta ttggtgtcgc
     1681 tgtttttgga ttgggtacgc aagcccgacg aacctgccgg cgcggcaggg cggcctttga
     1741 ccctgctgtc ggggcagcgg ctgactttgg gacagtttag ccgggatagg acggtgctgg
     1801 tgtatttttg gggaagctgg tgcggcgtgt gccgttatca gtcgccgata atcgatgatt
     1861 tggcggcgga cggcgtgccg gtcgtcggcg tggcggtacg ttccggcagt tcggcggaag
     1921 tggcggcgta tatggcaaaa cgcggcttgg gctttccgac tgtcaacgat gaggacgggg
     1981 gtttggcaag gtcttggcgg attgtcgcaa cgcctgccgt cgttttggtc aaaaatggga
     2041 aaatggttca ctatacgacg ggaatcagca gttattgggg cttgcgcgca cgaatttttc
     2101 aggcggatgt tttcggttaa cttttgtttt tgttaaactt tacgctatgt agagaatcaa
     2161 acggcatata ccttgctcgt ctgatgcggc ggcttttgtt ttttctggaa gaaagttctt
     2221 tcgacagtaa atgtaatact ttgttgagat tgtagggaaa atagactaag atataactat
     2281 taaaatattt ttagatagga ttatcggaat taaagtcttt tatacccagt cgtccgatgc
     2341 ggtttatagc gtattgttgc tatatgttcg ttttgttata taacggttgc atcaaaattt
     2401 acgcccacag gctttcccga cggtttgaaa gtttgatttt cgataacttg gagacttgaa
     2461 caatgcctac ccaatcaaaa catgcgtcta tcaatatcag tctgatacag gcaagggaag
     2521 ccctgatgac ccaattcagg cctattctga atcaggcgaa tattaccgat cagcaatggc
     2581 ggattatccg tcttttggcg gaaaacggca cgctggactt tcaagatttg gcgaatcagg
     2641 cgtgtattct gcgccccagc ctgaccggta tcctgacccg ccttgaaaaa gcgggtttgg
     2701 ttgtccgcct gaaaccttcc aacgaccaac gacgtgtttt tctgaagctg actgccgagg
     2761 gcgagaagct gtatgaggaa atcggcgaag aagtggacga gcgttacgac gctatcgagg
     2821 aagtgctggg ccgcgagaaa atgctgctgc ttaaagacct gttggcagaa cttgccaaaa
     2881 tcgaggatgc gttgaactcg taatacgccg taacgcgcgg aaacgtccga ccgacggctt
     2941 tttgaatcag aactgctgca catggggggt gccttgtgtg cagcattctt atatagggga
     3001 cagtttaaag gggaaaaatg gcggatttgc agaaaacttt tcaaacttcg ttccgtgatg
     3061 cgatggcatc ttgcgcggca ggcgttcatg tcatcacgac agacggtgcg gcagggcgtt
     3121 acggcattac aatgacggcg gttgcgccgg ttaccgacga gccgccgacc gtgatgctgt
     3181 gcatcaaccg gagtgcgcga atcattccga tcctgtcgga aaacggcagc ctctgcatca
     3241 atatgctggc ggacgaacat caggatgttg ccgaacattt tgccggattg accaatcttt
     3301 cacccgaaga acgttttgcc tatcatattt ggcattacgg taaaaccgga caacctgaaa
     3361 tagaaggcgc gttggcgcat ctgcacgggc atattgtcgg ccaacatgaa atcggcacac
     3421 attttgtgtt ttacgtcagg ctcgacgaaa ttaaaaattg cgtgggcaaa cgtcccgcgc
     3481 tgctttattt cagacggcag tttagatctt tagactgata ttcggacaga tatatatgaa
     3541 agcgatgata ctggcggcag gacgcggcga gcgtatgcgt cctttgaccg ataccactcc
     3601 gaagccgctg ctcgatgtgg cgggtaagcc tctaatcggt tggcacctat gccgtctgaa
     3661 gcaggcgggg tttaccgaaa tcgtcatcaa ccacgcttgg ctgggtcggc agatagaaga
     3721 tgctttgggc gacggctcgg cttatggcgt gaacatcgcc tattcgcccg aacccgcagg
     3781 cggcttggaa acggcaggcg gcatcgcgca ggcattgccg ctgttgggtg ggcagccgtt
     3841 tttggtggtc aacggcgacg tgctgaccga catcgatttt accgccgcgt ttcaggcggc
     3901 atcgtccctg ccggaacata tttccgccca tctgtggctg gtggaaaatc cgccgcacaa
     3961 ccccgacggc gatttttccc tgctgcccga cggcagcgtg cggccggaag taaatggcgg
     4021 caacggattg acattcagcg gcgtgggtat ttaccgtcct gaaatgtttg acggaatcga
     4081 agcgggcagt gtggcgaaac tcgcgcccgt attgcgtggc gaaatgcggc aaaaccgcgt
     4141 gagcggtcag aagcatacgg gcttgtggct ggatgtcggc acggtatgcc gtctgaaaga
     4201 ggctcaagcc cttgcagggg cttggaagtg aaataaaacg gtggcttgcc gagccggctg
     4261 ccgaacggtt ccgaccggat gtccagcata ttttcgtgga ggcgtgaaaa tagggcgttc
     4321 ggggctttcc gtccaacaaa tgccatctga agcgcggcgg tttgccgtcg gcgcggtgtc
     4381 ggattttatt gggtaacttt gttcagaccg ccgcccgtca gattgtcaaa acccggtttc
     4441 aggcggtatg gcggattcgg tttaacgttt caacgccagc accaacacgc ccgccgttac
     4501 cagccccaag cctatccatt cctgcgtgtt cgggcgttcg tccaagaaaa ccaccgccat
     4561 cagcgcgacc aagaccaggc tgaatttgtc gatgggggcg acttgcgagg cgttgcccag
     4621 ttgcagggct ttgaagtagg cgagccagga tgcgccggta gcaaggccgg ataggataag
     4681 gaatgtccag ttgcgccccg taaagccgtt cacaccctgc catttgccgg tgtaggtcaa
     4741 aaacaatacc aaagcggcga ggatcaccaa ggtgcggata aaggtggcga aatcggaatc
     4801 gatgccctgt aaacccattt tggcgaaaac ggcggtcaat gaggcgaagc ctgccgatgc
     4861 caatgcccaa aacagccatg cgttgctgct catgttttct ccttggattg tgaacaatat
     4921 gaacggtatt tttgttgcag cgtcaaaaat ttcactgcgg gtttggtgcg gataacgtta
     4981 taatatgcct gatattattt tcaatccacc tgtttgtcgc ctgatgcttt cagacggcat
     5041 gtccctcctc atttctaaag gaaaatcatg agcttcaaaa ccgatgccga aatcgcccaa
     5101 tcctccacca tgcgcccgat tggcgaaatt gccgccaagc tgggtctgaa tgccgacaac
     5161 attgagcctt acggtcatta caaggcgaaa atcaatcctg ccgaagcgtt caaactgccg
     5221 caaaaacagg gcaggctgat tttggttacc gccattaatc cgactccggc gggcgaaggc
     5281 aaaaccaccg taaccatcgg tttggcggac gcgttgcgcc acatcggcaa agatgccgtg
     5341 attgccctgc gcgaaccttc tctggggccg gtgttcggcg tgaaaggcgg cgcggcaggc
     5401 ggcggctatg cccaagtttt gccgatggaa gacatcaacc tgcacttcac cggagatttt
     5461 cacgccatcg gtgcggcaaa taatctgctt gccgcgatgc tcgacaacca tatctatcag
     5521 ggcaacgagt tggacatcga ccccaaacgc gtgctgtggc ggcgcgtggt cgatatgaac
     5581 gaccgccagt tgcgcaacat catcgatggc atgggtaaac ccgttgacgg tgtgatgcgc
     5641 cccgacggtt ttgatatcac cgttgcctcc gaagtgatgg cggtattctg ccttgccaaa
     5701 gacatcagcg atttgaaaga gcgtttgggc aacatcctcg tcgcctacgc caaagacggc
     5761 agccccgttt acgccaaaga tttgaaggca cacggcgcga tggcggtcct gctcaaagat
     5821 gcgattaagc ccaatttggt gcaaaccatc gaaggcacgc ccgccttcgt acacggcggc
     5881 ccgttcgcca acatcgccca cggctgcaac tccgtaaccg caacccgtct ggcgaaacac
     5941 cttgccgatt acgccgtaac cgaagcaggc ttcggcgcgg atttgggcgc ggaaaaattc
     6001 tgcgacatca aatgccgcct tgccggtttg aaacctgatg cggcggtcgt cgtggcgact
     6061 gtccgcgctt tgaaatacaa cggcggcgtg gaacgtgcca acctcggtga agaaaacctc
     6121 gaagccttgg caaaaggttt gcccaacctg ctgaaacaca tttccaacct gaaaaacgta
     6181 ttcggactgc ccgtcgtcgt tgcgctcaac cgcttcgtgt ccgactccga tgccgagttg
     6241 gcgatgattg aaaaagcctg tgccgaacac ggcgttgaag tttccttgac cgaagtgtgg
     6301 ggcaaaggcg gcgtgggcgg tgcagacttg gcgcgcaaag tcgtcaacgc catcgaaaac
     6361 caaccgaaca acttcaattt ttcctacgat gttgagctga gtattaaaga caaaatccgt
     6421 gcgattgccc aaaaagtgta cggcgcggaa gatgttgatt tcagcgcgga agcgtctgcc
     6481 gaaatcgcct cgctggaaaa actgggcttg gacaaaatgc cgatttgcat ggcgaaaacc
     6541 caatattctt tgagcgacaa cgccaaactc ttgggctgcc ctgaaggctt ccgcattacc
     6601 gtgcgcggca ttaccgtttc ttccggtgct ggtttcatcg ttgcgttgtg cggcaatatg
     6661 atgaaaatgc cgggtctgcc caaagttccc gccgccgaga aaatcgacgt ggacgcagaa
     6721 ggcgtgattc acggcttgtt ctgaacggtt tttgaaacca gatgccgtct gaagccgttt
     6781 cagacggcat tttttcggaa cgcgggcggc ggtatgctat aatccgccgt taaatttctc
     6841 tattttcagg aaaaaacatg agtttgaaat gcggcatcgt cggtttgccc aacgtcggca
     6901 aatccaccct ttttaacgcg ctgacccaat cgggtatcga agcggcaaac tatcctttct
     6961 gtaccatcga acccaacgtc ggcatcgtcg aagtccccga tccgcgtatg gccgaattgg
     7021 caaaaatcgt caatccgcaa aaaatgcagc ctgccatcgt cgaatttgtc gatattgccg
     7081 gtttggttgc aggcgcgagc aaaggcgagg gcttgggcaa ccagttcctt gccaacatcc
     7141 gcgaaaccga tgcgattgtg aatgtcgtgc gctgctttga cgacgacaac atcgtccacg
     7201 ttgcaggccg cgtcgatccg attgccgaca tcgaaaccat cggcacagag ttggcacttg
     7261 ccgacctggc aagtgtggaa aaagccatcg tccgcgaaga aaaacgcgcc cgttcaggcg
     7321 acaaagacgc gcaaaagctg gtcgatttgt gcaaaaaact gctgccgcat ctggacgaag
     7381 gcaaacccgt gcgttccttc ggtttggacg cggaagaacg cgcgatgctc aaaccgctgt
     7441 tcctgctgac cgccaaaccg gcgatgtatg tgggcaacgt cgccgaagac ggttttgaaa
     7501 acaatccgca cctcgaacgc ctgaaagaat tggcggcaaa agaaaacgcc cccgtcgtcg
     7561 ccgtttgcgc cgcaatggaa agcgaaatcg ccgaattgga agacgacgaa aaagccgagt
     7621 tcctcgccga aatgggcttg gaagaaccgg gcctgaaccg cctgatccgt gccggctacg
     7681 accttttggg gctgcaaacc tactttaccg ccggcgtgaa agaagtccgc gcttggacga
     7741 tacacaaagg cgacaccgcc ccgcaagccg ccggcgtgat tcacaccgac tttgagcgcg
     7801 gcttcatccg cgcccaagtc atttcttacg acgactttgt ctcgctcggc ggcgaagcca
     7861 aagccaaaga agccggcaaa atgcgtgtgg aaggcaagga atacgtcgtg caggatgggg
     7921 atgtgatgca ctttttgttt aacgtgtaac ccaaatgcgg caggttttca gacggctttg
     7981 ccgaaaatgc cgtctgaagt cggttttggt ggctttcggc gtttccatac cgccggaatg
     8041 cggctgcatc aaaataaaat cccgcccgca tttccgattt gccctccccg attcctgcaa
     8101 aacaaaccgc ctgccccgct gttgcaaaaa gccgtccggc attccgaata tcccgagccc
     8161 cgatacaaaa tgacctttca gacggcattt gcgccgccgc gtttcgagta tagtggatta
     8221 actttaaatc aggacaaggc gacgaaaccg cagacagtac agatagtacg gcaaggcgag
     8281 gcaacgccgt actggtttaa a
//
LOCUS       DAXHKG010000088         8238 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.088, whole genome shotgun sequence.
ACCESSION   DAXHKG010000088 DAXHKG010000000
VERSION     DAXHKG010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8238
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.088"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(107..1030)
                     /gene="era"
                     /locus_tag="ACFMWP_001495"
     CDS             complement(107..1030)
                     /gene="era"
                     /locus_tag="ACFMWP_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HFC5892077.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="ACFMWP_001496"
     CDS             complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="ACFMWP_001496"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HFC5892078.1"
                     /translation="MKDDVLKQQAHAAIQKKLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRRADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1963..2286
                     /locus_tag="ACFMWP_001497"
     CDS             1963..2286
                     /locus_tag="ACFMWP_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HFC5892079.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAVLLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2333..2809
                     /gene="ribH"
                     /locus_tag="ACFMWP_001498"
     CDS             2333..2809
                     /gene="ribH"
                     /locus_tag="ACFMWP_001498"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HFC5892080.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2887..3312
                     /gene="nusB"
                     /locus_tag="ACFMWP_001499"
     CDS             2887..3312
                     /gene="nusB"
                     /locus_tag="ACFMWP_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HFC5892081.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="ACFMWP_001500"
     CDS             complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="ACFMWP_001500"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HFC5892082.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAVLPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQDILFLVHGEVTDPEIDIFDREAAFIERVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAVELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENAGTITLVKQSQTVPVSVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4774..5379)
                     /locus_tag="ACFMWP_001501"
     CDS             complement(4774..5379)
                     /locus_tag="ACFMWP_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892083.1"
                     /translation="MPSEMRMSRLMLLLSAFVLAACNAQNRQSGVRHQDFARVAVDLF
                     RSACVLTQGSFESVSKFAAVGHFVPVGKEDLSHLPPTVAEPDVQALWTLERDGGIYYL
                     SLTRDSCSVKAERADSAALLEHFDGLVRQPPKNANIELRAEQSVQASFEIRQVSYAWR
                     EAGSSEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
     gene            complement(5380..5604)
                     /locus_tag="ACFMWP_001502"
     CDS             complement(5380..5604)
                     /locus_tag="ACFMWP_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HFC5892084.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            5713..6324
                     /locus_tag="ACFMWP_001503"
     CDS             5713..6324
                     /locus_tag="ACFMWP_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HFC5892085.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGDVPADTKGLVQRLKERAGRYAPSIKPHNK"
     gene            complement(6384..7256)
                     /gene="accD"
                     /locus_tag="ACFMWP_001504"
     CDS             complement(6384..7256)
                     /gene="accD"
                     /locus_tag="ACFMWP_001504"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HFC5892086.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRREMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(7293..8078)
                     /gene="trpA"
                     /locus_tag="ACFMWP_001505"
     CDS             complement(7293..8078)
                     /gene="trpA"
                     /locus_tag="ACFMWP_001505"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HFC5892087.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAENA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
BASE COUNT         1988 a         2499 c         1959 g         1792 t
ORIGIN      
        1 tgcacagata atatcaaccc gtttttaaca aagatattcc cgattgaaac aaaatgccgt
       61 ctgaaacctg ttcggacggc atttgcgtaa agttcagcaa gaaaaactac aaacccagct
      121 cgcgcaggaa gcggatgtcg tccgcccaac cggatttgac tttgacccag accttcaaaa
      181 atactttggt atcaaacagt ttttccatat ccaaccgcgc ttcggtggaa attttcttca
      241 aacgctcccc gcctttgccg attaaaatcg ccttttggct ttccttatcg accaaaacgg
      301 cgatatagat gcggttcaaa ccgtcttcct cttcaaactg ctccacttcg acgttcatcg
      361 cataaggcaa ttcctcgccc aaatagcgga acaatttttc acgcacgatt tccatcgcta
      421 aaaaacgcgc cgatttgtcc gtaaccatat cttcgggata catcggcacg ctttcgggca
      481 gatacggctt gagcagctcc aacaggttgg caatccgcaa tccgtgtttc gcactgaccg
      541 cctccgccgc cgcaaattca aattcggcgc gcacttgggc aacaaacgcc tccagcgcgt
      601 aacggtcttt cgccttgtcc ttgtcgattt tgttgaccac taaaatgacc ggcgtgtgct
      661 tgggcagttg tttcaacacg acacggtcgg catcggtaaa gcgcatcgct tccacgacga
      721 aaaccaccac atccacgccg ccaagcgcct cggtaacgtt ttgattcagc ctgtcgttga
      781 gcgcgttgcg gtggtcggtt tgaaagccgg gcgtatcgac aaacacgaac tgcgcggtat
      841 cgtcggtata aatccccgtt acgcggttgc gcgtcgtctg cgcctttttg ctggtgatgc
      901 tgattttctg accgatgaga tggttcatca gcgttgattt gcccacgttc ggacgaccga
      961 caatcgccac gaagccgcaa cggtatccgc cggcggcgcg ttcccctgca aggaaggttt
     1021 caatatccat attcgctttc atatccacat ttcagacggc atattcacgc gccgcctcat
     1081 ttctttttct tcttcagcgg cagcttctct tccagccatt tcaaagcctc tttcgccgcc
     1141 tcctgttccg ccgccttgcg gctcgtccct ttggcacggc acacgaaacc cagttcgccc
     1201 aaatcgcagg aaaccacaaa catactgtcg ttggcatggc cgatttgctc ttcgatacgg
     1261 tatttcggca aagcaaagcg gcgtgcctgc aacgcctcct gcaaagcagt tttgccgtct
     1321 tttgcctgat tttgaaaatc ggcgcgccgg acgcgatcgg caaacaaatg gcgcaccacc
     1381 ttttccgccg tgttgaaatc ggcatcgaag ctgacggcag caaacatcgc ctccatcgcg
     1441 tctgccagta tcgaaggccg tctgaagccg ccgctcttca actcgcccgc ccccaagtac
     1501 aggccgtcgc cgacattcat ttccgccgcc atttccgcca gcacgccctc attgaccaga
     1561 cttgcccgca accgcgacaa ctcgccctcg gtcaacttcg gaaacgcgtc aaacagcatc
     1621 cgcgccaccg tataattcaa aatcgaatca ccgacaaact cgaaccgctc gttgtgcttc
     1681 gcatgatggc tcctgtgcgt caaagcctgc cgcaaaagcg aaatatcgcg gaacgcgtag
     1741 cccagtttct tctgtatcgc cgcgtgtgcc tgctgtttca aaacatcgtc tttcattacc
     1801 gtcttccgca aaaaacagcc cgaatgcgtt tccatactcc aaaaatacag aaacacctta
     1861 aggctgcaaa cggcgcacat tgtaccacca aaccgccgcc gtctgccgac aacgcacgaa
     1921 tcgtggtaaa atccgtaagt tttcccccaa cgtattcccg taatgaacgc atttgcacaa
     1981 gcactttcct cggcactcga ccgctgtatc gccaccaaca ccgtcgccaa acaaaaccgg
     2041 cccgtcggct tcctctaccg cgaagccccc gtttttgaaa acgacagcgg ctggcgtttc
     2101 ttcagcggcg acgagaccga cgaatacacc gacgatcccg acaacttcag catcgtcagc
     2161 ctcgccgaca tcgccaaaac caaccctgaa accgccgtac tgctttccca acctgaaggc
     2221 agcgcgtggg aattggcaga agacggcaca ttccaaaccg tcgccgactg gcaaccgcaa
     2281 gactgaaacc ttcagacggc attccgaaac cccgaatacc aaaggacacc caatgaacac
     2341 catcgccccc aaccttgacg gcaaacacct ccgcatcggc atcgtacagg cacgtttcac
     2401 caacgaaatc ggcagcgaaa tgctcaaagt ctgctgccgc accctccaag aattgggcgt
     2461 ggcagacgaa aacattaccg tcgccaccgt acccggcgcg cttgaaatcc ccatcgcgct
     2521 gatgaacctt gcctcttctg aaaaatttga cgcactgatt gccatcggcg tcgttatccg
     2581 tggcgaaacc taccatttcg agctggtttc caacgaatcc ggagcagggg tcagccgcgt
     2641 cgcactcgac tacaacatcc cgattgccaa tgccgtcctg accaccgaaa acgacgcaca
     2701 ggcaatcgaa cggattgaag aaaaagcctc ggatgccgcc aaagtcgccg tcgaatgcgc
     2761 caacctcgtc aacctgctgc tcgaagaaca gtttgaagac gaagaataac aaacagggcg
     2821 tacaccaata cgccctttcc gtttcagacg gcataccgtg ccgcccaacc gtttcaagga
     2881 aaaatcatga aaacagcccg ccgccgttcc cgcgagcttg ccgtacaagc cgtttaccaa
     2941 tcccttatca accgcaccgc cgcgcccgaa attgctaaaa acatccgcga aatgcccgac
     3001 tttgccaaag cggacgaaga attgttcaac aaacttttct tcggtacgca aaccaacgca
     3061 gcggactaca tccaaaaaat ccgccccctg ctcgaccgcg acgaaaaaga cctcaatccc
     3121 atcgaacgcg ccgtcctgct gaccgcctgc cacgagctgt ccgccatgcc cgaaacgccc
     3181 taccccgtca ttatcaacga agccatcgaa gttaccaaaa ccttcggcgg cacggacggg
     3241 cacaaattcg tcaacggcat cctcgacaaa ctcgccgccc aaatccgccc cgacgagccc
     3301 aaacgccgtt gatgcatcac aaatttaaag aaagttctat gtccttattt ctgctttctt
     3361 tgtttcgtca ttcccacgca tgtgggaatt tggttttttg aattttgggt atttcaaata
     3421 aattctgaaa cttcaatctc gtcattcccg cgcaggcggg aatccggttt tttgagttgc
     3481 tgccgttttt gataaactct agtcgcatcg aatttccaga ttcctgcctt cgtgggaatg
     3541 gcgaaatttg aaaattgtgg gaatttatcg gaaataaccg aaacgtaaca aactcaaacg
     3601 ccgttgacgt atcaatcagt cagcaacaca aatgccgtct gaaagccctc ccttcagacg
     3661 gcattttgtt tccagcccat caatactgca ccgtccagcc gatttcgccg cccgcgcgca
     3721 tcgggacaag ttcgccgtcg ccgtagggaa cacttacggg gacggtttgg ctttgtttga
     3781 cgagggtgat cgtgccggcg ttttccggaa tgccgtaaaa ccttgcgcca tttttcgagg
     3841 caaaggcttc gagtttgtcc aacgcgcctg ctttttcaaa cacttcggcg taaagctcga
     3901 cggcggtcat cgcgctgaac ataccggcgc agccgcaggc gttttctttg gcggacttgg
     3961 cgtgcggcgc ggagtcggtg ccgaggaaga atttgtgcgc cttctcgccg gtaacggcgg
     4021 caaccaatgc ctgacggtgg gtttcgcgct tgaggacggg caggcagaaa tgatgggggc
     4081 gcacgccgcc gaccaagagg tcgttgcggt tgagcaggag gtgttgcggg gtcacagagg
     4141 cggcaacgtt gtcgcctgct tccaaaacca ggcgggcggc ttcggcggtg gtaatgtgtt
     4201 caaacacgac tttaagattc ggcacttgcg ccaaaacggg tttcatcacg cgctcgataa
     4261 aggcggcttc gcggtcgaaa atgtcgattt cggggtcggt tacttcgccg tgaacgagga
     4321 acaggatgtc ctgttttgcc atttcttcca acacggggat gagcttgaat aggtcggtta
     4381 cgccggaatc ggaattggtc gtcgcgccgg cggggtagag tttgaaggcg acgatgccgg
     4441 cggctttggc ttcgcgcacc agctcgggcg tggcttggtc ggtcaggtaa agcgtcatca
     4501 gcggctcaaa cgcgctgcct tcgggcaaca ccgccataat gcgcgctttg taggcaagcg
     4561 cgtcggctac actgacgacg ggcggtttga ggttgggcat aatgacggcg cgccccattt
     4621 ggcgggcggt ataaggggca acggctttga gcgcgtcgcc gtcgcgcagg tgcaggtgca
     4681 tatcgtcggg gcggataatg gtcagggttt gcatggtttt cctttgtttt atttgaatgt
     4741 tcagacggca tgccgacttt atgccgtctg aagttagggg agaattaggg gtttcccgtt
     4801 gtgggaacgg tgcgtcaggt tcaaaactgc ctgtacgggt aaatccgggg aatcggcggt
     4861 ttgtgcggtc aatacggttt cttcggagct gcctgcttcc cgccaggcat agctgacttg
     4921 gcggatttca aatgatgcct gcaccgactg ttccgccctc aattctatat tggcattttt
     4981 cggcggctgt cggacaagtc cgtcaaaatg ttccaacagc gcggcactgt ctgcccgctc
     5041 ggctttcaca ctgcaactgt cgcgcgtcag gctcaaataa taaatgccgc catcgcgttc
     5101 aagcgtccac aacgcctgta catcgggttc tgcaacagtg ggcggcagat gggacaggtc
     5161 ttcctttccg acagggacaa aatgtccgac agcggcaaac ttggaaaccg attcaaaact
     5221 gccttgagtc aggacgcagg cactccgaaa caaatcgacg gctacacgcg cgaaatcctg
     5281 atgccgtaca ccggattgcc ggttttgggc attacacgca gcaagcacaa atgccgacag
     5341 caataacatc aatcgggaca tccgcatttc agacggcatt tatttgtgct tgacgaccag
     5401 cgtgaacacg ccgtcctgtt cggaagcatc caacagcaca tgaccggttt ggcggcaaaa
     5461 agcctcaaaa tcccccggtg cgccgccgtc ggttgccaga acggtcaaca cgtcgccctg
     5521 ctgcatttgc gccaaagcct ttttcgcccg caaaatcggc aggggacatt tcaatccggt
     5581 tacgtctaaa gtttcgctgt tcatcgtttg taccgtttaa aaaatgggaa tcggggggag
     5641 attatacccc agttgcttgc agcccccttt gccaacccat aaaataacgc cgttttcaat
     5701 ttggagaaac ttatgcgccg caccgccctc ctgctgctcg cactcaccgc cggcacgtcc
     5761 cttgctgccg gcttcaacca aaaagacacg ccgatcaaca cccgctaccg cgaaacgccc
     5821 gaagaagccg ccgcccgcga atttaaagaa cataccgcca aactgccgcc gctgcccgat
     5881 acgcactcgg acggctggtt cgacatttat gtggatgaaa attacggcaa acagccgaaa
     5941 atcctgctcg acagcctgca aattatgccc gcgcccgacg gcagcatccg ctacattctc
     6001 aatatccgct ccgacaaagg ctacgacaac ctgactgccg aaggcatatt ctgcgcccgc
     6061 ttctccatca ggttcggcaa cggcaaacct tcctcctata aagtgttcgg ctacggcgac
     6121 acggtcaacc gccgctggat acagccccga aacgccgaat ggaaaccgat aggcggtaca
     6181 ttaagccgca acgacgcact gcgcaccgtc ctgtatcagg cattctgcga gggcgatgta
     6241 cccgccgaca cgaaaggttt ggtacaacgc ctgaaagaac gtgccggacg ctatgccccg
     6301 tcgataaagc cgcacaacaa ataaccagac acaaaaatac cgtctgaaac atcggtttca
     6361 gacggtattc gattcatcag ccatcaagcg gcggaaactt tgtcctgacg gcacaacagc
     6421 gtaatcaaat cactgatgcg ccgcttcatc tcacgccggt caacaatctg gtcgattgcg
     6481 cctttctcca gtaaaaactc agcacgctgg aagccttccg gcaaggtttc ccgtacagtc
     6541 tgttcaataa cgcgcggtcc cgcaaaaccg attagggcat tgggttcagc caatacgaca
     6601 tcacccaaaa atgcgaagct ggcggatacg ccgcccatag tcggatcggt caacaccgat
     6661 ataaacggca ggcgtttttc cgtcagcaaa tgcagcgcgg cactggtttt cgtcatctgc
     6721 atcaatgagt tcacaccctc ctgcatacgc gcaccgccgg aagccgccac acagacgaac
     6781 ggacaattgt cggcaaccgc ccggcggacg ccctgtacga atcgttcgcc cacaaccgaa
     6841 cccatcgaac cgccgataaa gcggaactca aacgcagcaa ccacaacggg cagaccgttc
     6901 atcttgcctt tcattaccac caaagcatca tcttccccgg tcagcttgcg tgccgcactc
     6961 aaacgatccg gatatttttt gccgtcttta aacttcaaag gatctgtcgg tttgacattt
     7021 ccggcaacct cctctctgcc atcctcatcc aaaagcagat tcaggcgttg tcgtgccgac
     7081 aacggattgt ggtggttgca tttcggacaa acctgattgt tctgctgcaa ctcggtcgaa
     7141 taaacggttg ccgaacaaga cggacatttg tgccacaaac cctcgggaac attggaagaa
     7201 ccgtctttgc tgcggttttt gattttgggt ggcaggattt tatctaacca gctcatggac
     7261 aactcctaaa atatttagaa tgcgtgacag aatcagcgca cggcatcctt caactctttg
     7321 accaaagcac cgacggccgc agcctcgttg cccgcattgt tttcaatctc tttcacaatc
     7381 cggctgccga caatgaccgc gtcggcaacc cggccgattt tgcgcgcgtt ttccgcattg
     7441 ctgatgccga aaccgacacc gatgggaata tcgatatact gatgcaaata ctctatttta
     7501 cgcgaaacct catccgtatc caaacttgcc gcgcccgtta cgcccttgag cgaaacataa
     7561 tagacaaatc cgcctgccag ctcggcaatg gttttaatac ggtcttccgt cgtcgtcggc
     7621 gcaatcagga aaatacagtc gaccccgtta tccttcagct cgcgatagag cggatcgatg
     7681 gtttcgacag gggaatccac cgtcaacacg ccgtccacac ccgccattgc ggcttcctga
     7741 gcaaactccc gataacccat cttatgtaca gggttcaaat atcccatcaa aacaaccggc
     7801 gtttgcgtgt cggtttcacg gaattttctg acgacatcca agacatcgcg cagcgaaatc
     7861 ccgtttgcca acgcccgctc cgccgcacgc tgaataaccg gtccatccgc catcggatcg
     7921 gaaaacggca cgcccaactc caaaatatcc gcaccgtttg caaccatgcc gtgcatcaat
     7981 gccaaagttg tccgaatatc ggggtcgccc accgtaatat agggaatcaa tgcctttccg
     8041 ccatccaaag cggcaaaagc ctgccggatt ctgctcattt gtctcttcca tcctatcggc
     8101 aaatatgcca taaaacacaa tcagtaaatt tttcccagta taacatttgc ggtacggata
     8161 ggcgaatacg gcaaacagaa accacgcaaa tcagagccgc cgtttgaacg aggcggaaat
     8221 aaacggcaag catctcgg
//
LOCUS       DAXHKG010000089         8234 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.089, whole genome shotgun sequence.
ACCESSION   DAXHKG010000089 DAXHKG010000000
VERSION     DAXHKG010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8234
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.089"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(208..1593)
                     /gene="pntB"
                     /locus_tag="ACFMWP_001506"
     CDS             complement(208..1593)
                     /gene="pntB"
                     /locus_tag="ACFMWP_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HFC5892088.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TSSSGSQEIGEYREVKAADVAEMLKGANSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1659..2042)
                     /locus_tag="ACFMWP_001507"
     CDS             complement(1659..2042)
                     /locus_tag="ACFMWP_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HFC5892089.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRDFLAHTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHAIGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(2046..3587)
                     /locus_tag="ACFMWP_001508"
     CDS             complement(2046..3587)
                     /locus_tag="ACFMWP_001508"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HFC5892090.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQAAGATVADKAAVWACPLLYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     SKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3877..4710
                     /gene="serB"
                     /locus_tag="ACFMWP_001509"
     CDS             3877..4710
                     /gene="serB"
                     /locus_tag="ACFMWP_001509"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HFC5892091.1"
                     /translation="MPHALVLQFPSAEALPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SGADAALLGSRQIDHVVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLSEYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            4774..5996
                     /locus_tag="ACFMWP_001510"
                     /pseudo
     CDS             4774..5996
                     /locus_tag="ACFMWP_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            6161..7741
                     /gene="purH"
                     /locus_tag="ACFMWP_001511"
     CDS             6161..7741
                     /gene="purH"
                     /locus_tag="ACFMWP_001511"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HFC5892092.1"
                     /translation="MPSIKRALISLSDKTGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGEPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDIHR
                     LNRADLKVVSKRQPTEQEWNDLMFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
BASE COUNT         1816 a         2259 c         2343 g         1816 t
ORIGIN      
        1 taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt tgtgtcagtt
       61 tcagatgtag gtgcttattc ggacgggccg tctgaaaatg tttgccccaa tgcaaaaaaa
      121 atcactgcaa accttcataa acggggtttg cagtgatttt ttcaaatcaa acagattgaa
      181 aacctgcgcc gaattgttca gacggcatta ttttttcagt tcggacagaa tgtcatccac
      241 ggttttcttc gcatctccga aacacattac gctgttttcg ttgaagaaca gcgggttttg
      301 tacacctgcg tagccggtat tcatcgagcg tttgaagacg acgacttctt ttgccttcca
      361 tacttccaac acgggcatac ccgcaatcgg gctgttcggg tcggtttggg cggcaggatt
      421 gacggtatcg ttcgcaccaa tcaccaagac cacatcggtt tcggggaagt cgtcgttgat
      481 ttcgtccatt tccaacacga tgtcgtaggg gactttggct tcggcaagca gtacgttcat
      541 atgaccgggc aggcggccgg cgacggggtg gatgccgaag cgcacttctg tgccgttttt
      601 acgcaaaagc tcggtgattt cggcaacggg gtattgcgct tgtgcgactg ccataccgta
      661 gcccggggta atgatgacac tgtttgcgcc tttcagcatt tcggcaacat cggcagcttt
      721 gacttctcgg tattccccta tctcttggct gccggaagat gatgtgccgc tgtcgctgcc
      781 gaaaccgccg gcgattaccg agacaaacga ccggttcatg gctttgcaca taatgtagga
      841 cagaatcgcg ccgcttgagc cgaccaacgc gccggtaacg atgagcaggt cgttggagag
      901 cataaagcct gccgctgcgg ccgcccagcc ggagtaggag ttgagcatgg acacgaccac
      961 gggcatatct gcgccgccga tggaggcgac caagtgccag ccgaatgcga gggcgatcag
     1021 agtcattatc agcaggatga agccgctgcc gtcaatgccg acaaatacga gcagcaacac
     1081 aaacgatacg gcaagtgcca gtgcgttgag cttgtgtttg gcaggcagtt gcagcgggct
     1141 gctgctgatt ttgccgttga gtttgccgaa tgcgaccagc gagccggtaa aggttaccgc
     1201 gccgatgaaa atgcccaaat agacttcgac cagatggatg gtgtgcatat cgtgcgaaac
     1261 gttgcccggc tcgatatagc tgttgaagcc gaccaaaacc gccgctaggc cgacgaagct
     1321 gtgcagcagg gcaatcagtt cgggcatttc ggtcatttcc acctttttgg ctttgtagat
     1381 gccgattgcc gcgccgatga gcatggcgat gatgatccag cccagtccgt gggtattgtc
     1441 ggaaaaaaca gttacaaaaa gggcgaccgc cataccggcg ataccggaat agcagccctg
     1501 tttggcggtt tcctgtttgg acagccccgc cagtgagaag atgaataaaa ttgcggcaac
     1561 gatatacgcc gctgttacga gtcctgaaga catggaaatt ctccgatttt cgatgatttg
     1621 tttttaatgc cgtctgaact gttcagacgg catctgtttc aagcagccgc gacaaacagc
     1681 ccgacggtgc aggcaaatcc gcccgcccac atcagcgagc gcaatgctgc tttgtctgcg
     1741 atgtagcacc agataaaggc gaggcggaac aggatgaaca ggccggcaag cgtgttgacg
     1801 gttgcttgtc cggcattgcc gattgcgtgt gccgtcaaaa cggcggcggc aaacggtgca
     1861 aaggcttcaa aaccgttttg ctgcgcggcg tgggcacggg cggctgtgcc ttgcgtgtgc
     1921 gccagaaaat cgcgcggatt gtggttgtct ttaaaccgga atccgcccgc ttttttggca
     1981 tatgccgcac aaaaaagcgg caataggcag gcaatcagga tgcaccaata ggcgaaagtc
     2041 atggcttacc ctttcttaaa catattcagc atacgccgtg taaccgcaaa gccgccgaag
     2101 atgttgatgc tggcaatcag gatggcgatg aaggcaagca gggtcacgaa accgttgcct
     2161 tggctgattt gcagcagcgc gccgacgacg atgatgccgg agatggcgtt ggttaccgac
     2221 atcagcggtg tgtgcagcga gtggctgaca ttccaaacga cgtagtagcc gatgacgcag
     2281 gcgaggacga acacgataaa gtggttcaag aatgctgcgg gtgcgaccgc gccgacccac
     2341 agcaccaata cggcggcgat gacggcaggc gcgagttttt tccacagggg aacgggtttc
     2401 ggctcgggct tggcggcagg cgcggctttt tcagacggcg tttgctgcgg ctgtgcggaa
     2461 acttgaatcg gcggaggcgg gaaggtgatt tcgccgtcgc gggtaacggt catattgcgg
     2521 ataatcacgt cttcaaaatc cagcgtgatt tcgccgtctt tgttcgggct taacaacttg
     2581 gtcaggttga ccaggttggt ggcgtaaagc tgggaagact gtccggcaag gcggtttgcc
     2641 atgtcggtgt agccgatgat tttcacgccg ttgccggtta cggacaattc gcccgggcgg
     2701 gtgagttcgc agttgccgcc cgtcgccgcc gccaaatcga cgatgacgga gccggatttc
     2761 atgctttcca ccatttcttt ggtaatcagc ttgggcgcgg gtttgcccgg aatggcggcg
     2821 gtggtgatga tgatgtccac ttctttcgcc tgctcggcaa agagcttcat ctcggctgcg
     2881 ataaattcgt cgctcatcac tttggcgtag ccgtctccgc tgccgcccga ttcttgtggg
     2941 aagtcgagtt tcaggaactt gccgcccatc gattcgattt gttccgccac ttccaagcgg
     3001 gtatcgaacg cgcgtaccac tgcgccgagc gagtttgccg taccgatcgc cgccaaacct
     3061 gccacacctg caccaatcac caaaacctgc gcgggcggca ctttgctggc ggcggtaatt
     3121 tgaccggtga agaaacggcc gaaggcgttg gcggcttcaa ttacggcgcg gtagccgctg
     3181 atgtttgcca tcgaagacaa agcgtccaaa gcctgcgcgc gcgaaatgcg gggcaccata
     3241 tccatcgcca gcgcgttcac tttcttggcg cgcaaggctt cgaccaaagc ctcgttttgg
     3301 cgcggccaca ggaagctgac gatggtctgc ccttctttga gcagcggcag ctcgccttcg
     3361 gacggcgcgt tgactttgta aagcaaaggg catgcccaaa ccgccgcttt gtcggcaacg
     3421 gtcgcgcctg ctgcttggta agcggcatcg tccaaacttg ccgccaaacc tgcaccgctt
     3481 tcgacaacgg tttcaaagcc cagtttgccc agcagggcga cggtggcggg cgtacaggcg
     3541 acgcgggttt cgccggataa tgactcgcgt gggataccga ttttcatctc tgaatccttt
     3601 ttcgggtagt ttatatgtat cgtgggttaa atttaaatcg gggcagggcg gagcaacgcc
     3661 gtaccggttt aaaaccgatt cacttcaaat gttaatatat tttagataat ccccttataa
     3721 cgaattttca tcaggctggc aatagttgcg gcattttccc gtgttgtccg acacatactg
     3781 ccgtttgcgt ttgaagtcat tttccgattg cagtccctcc cgccgtaaca ttctttgccg
     3841 tttcactata taatccgcat tttttgagcc gtcgttatgc cgcacgccct cgtcctccaa
     3901 tttccctccg ccgaagccct gccttccgac ttcccctccc gcctgcccga acctgattgc
     3961 gccgatgaaa agcgtatgcg ttttatcgtt gaagaagggt tttctttaag cggggcggac
     4021 gcggcgttgc ttggcagccg tcaaatcgac cacgtcgtgt tgccggatat ggattttggc
     4081 gaactcggtt tgattgtcag cgatatggat tcgacgctga ttaccatcga atgcgtcgat
     4141 gaaattgcgg caggcgtggg tttaaaagac aaggtagcgg aaattaccga gcgttcgatg
     4201 cgcggagagt tggatttcga gcagtcgttg cgcagccgcg ttgcgctgtt ggcgggattg
     4261 gacgaacaga ttttggcgga cgtttatgaa aacgttttga agctctcgcc cggtgcggaa
     4321 tttttgttgg acgaatgcaa aaggcacgat gtgaaattcc tgctggtgtc cggcggcttc
     4381 acgtttttta ccgaacgtct gcaacaacgc ctcggcttcg aataccaaca cgccaatgtt
     4441 ttggaaattg aaaacggcag gttgaccggc cgtctgaaag gcagaatcat cgacgcgcag
     4501 gcaaaggcgg atttattgag cgaataccgc agccgcctcg gattgcagcc acatcaggtg
     4561 ttggcgatgg gcgacggtgc gaacgatatt ccgatgctca aagaagcggg cataggcgtg
     4621 gcttaccgtg ccaaaccgaa agcgcgggcc gccgccgatg cctgtatcaa tttcggcggt
     4681 ttggagcgtg tacgcggcct gttcggatag gcggatagga aacggatgtc gtccgaaagg
     4741 ttttcagacg gcatttgaac ggcaggaacg acagtgggac gcagaaaact ttggtttgcc
     4801 ctggcagcag caggcgttat cggcggtttg gtcggcattg tgctgacgga actgatgcac
     4861 ttcatacagc atacggcaac ggttatggcg cggacggcgt gtacacttcg ttccgcgaag
     4921 gcgtggcaca ggcttccggt atgcggcgcg ttgccgtgct gacgctgtgc ggcgcggtcg
     4981 caggcagcgg ctggtggttg ctgaaacgtt tcggcaagcc gcaaatcgaa atcaaagccg
     5041 ccttgaaaca gccgttgcag gggctgccgt ttctgacgac ggttttccat gttctgctgc
     5101 aaatcataac ggtcggactc ggttcgccgc tcggacgcga agtcgcgccg cgagaaatga
     5161 ccgccgcgtt tgcttcggca ggcggcaaac gcttgggttt ggacgaaggc gaaatgcgcc
     5221 tcttgattgc ctgtgcgtcc ggcgcgggtt tggcggcggt gtataacgtg ccgctcgcct
     5281 ccacgctgtt tatcctcgaa gcgatgttgg gcgtgtggac gcagcaggcc gccgccgccg
     5341 cgttgctgac ttcggtcatt gccaccgccg tcgcgcgcat cggcttaggc gacgtgcagc
     5401 aatatcatcc cgccaacctt gccgtaaaca cctcattact ttggttttcc gccgtcatcg
     5461 gcccgatact gggcgcaacg gcggtatatt tccggcgcag tgccgaaaag ttccccttcc
     5521 tcaagcgcga caatccgaga attattcctt tggcgattgc tttgtttgca ctcatcggcg
     5581 cgattgccgt ttggtttccc gaaattttgg gcaacggcaa agcaggcaac caactgacct
     5641 ttggcggatt gaccgactgg caacacagcc ttgagctgac cgccgtcaaa tggctggttg
     5701 tcttgatggc gttggcggca ggcgcatacg gcggactgat tacgccgtct atgatgctcg
     5761 gcagcaccat ttcttttgca gccgccgccg cgtggaacag cgttttcccc gaaatgccgt
     5821 ctgaaagcgc ggcagtcgtc ggcgccgccg ttttcctcgg cgtttccctc aatatgccgc
     5881 tgaccgccgc cgtctttatt ttggaactca cctacgcccc cgccgctttg ttgatgcctt
     5941 tatgtacggg tatggcgggc gcggtatgga cggcaaggaa aatgggatgt aaataaccga
     6001 aaggcaaaat gccgtctgaa accggttttc agacggcatt cctttgggga ttgtcaacaa
     6061 tatctgcaaa aacctactgc cggaaagtgg aaaatagcgg ataataccgc cccgacaaca
     6121 ttaccgtttc ccatcccaac gtcagaaaaa ggaaatccct atgccttcca tcaaacgcgc
     6181 cctgatcagc ctgtccgaca agacgggcgc agtcgaattt gcccaaaccc tgaccaagct
     6241 cggtgtcgaa atcctctcta ccggcggcac ggcgaagctg cttgccgatg cgggcgttcc
     6301 cgtgattgaa gttgccgact acaccggttt ccccgaaatg ctcgacggcc gcgtgaaaac
     6361 cctgcatccg aaaatccacg gcggtatttt gggccggcgc gatttggacg aacacgtcgc
     6421 caagatggaa gaacacggca tcggcaacat cgacctcgtg tgtgtcaacc tctacccctt
     6481 cgccgccacc atcgccaaac caaactgcac gctggaagac gcgattgaaa acatcgacat
     6541 cggcggcccg accatggtgc gctccgccgc gaaaaactgg aaacacgtcg ccatcgttac
     6601 cgacacagcc gatttcccgg ccatcgccgc cgaactcgaa gccaacaatg gcgcattgag
     6661 cgacaaaacc cgcttcaacc tgtcgcgcaa ggcgttcagc cacaccgccc aatacgacgg
     6721 catgatttcc aactacctga cctcactttc agacgacgtt ttgagcggag agcctgaaat
     6781 cggcgaattt ccaagccagt tcaaccaaag ctggattaaa gtgcaagaca tgcgctatgg
     6841 cgaaaacccg catcagcgcg ccgcgttcta ccgcgatatt gaccccgccg caggcagcct
     6901 ttccgcctac aaacaactgc aaggcaaaga attgtcttac aacaacatcg ccgatgccga
     6961 tgccgcatgg gaagccgtca aatcctttga cgcgccagcc tgcgtgatcg tcaaacacgc
     7021 caatccgtgc ggcgtcgccg ttgcagccga tacattgacc gcctacaaac tcgcctacgt
     7081 caccgacacc accagcgcgt tcggcggcat catcgccttc aaccgcgaag tggacggcga
     7141 aaccgtcaaa cagattaccg acaaccagtt tatggaagtc ttgatggcgc cgaagtttac
     7201 cgccgaagcc ctcgaaatcg ccgccgccaa gaaaaacgtg cgcgtattgg aagtgccgct
     7261 tgaggcaggc gcaaaccgct tcgaactcaa acgcgtcggc ggcggactgt tggtacaaac
     7321 ccctgatatt caccgcctca accgcgccga tttgaaagtc gtctccaaac gccaaccaac
     7381 cgagcaagaa tggaacgacc tgatgtttgt ttggaacgtc gcaaaatacg tcaaatccaa
     7441 cgccatcgtc ttcggcaaag gcggtcaaac ctacggcatc ggcgcaggcc aaatgagccg
     7501 cgtggacagc acccgcatcg ccgcccgcaa agcgcaagat gccaatctcg acctcaacgg
     7561 cgcatgtgcc gcttccgatg ctttcttccc cttccgcgac ggcgtggacg tgattgccga
     7621 gcagggcatc aaagccatca tccatccggc aggttcgatg cgcgatcagg aagtcttcga
     7681 cgcagcggac gaacacggca tcgccatggt cgtaaccgac gtgcgccact tccgccatta
     7741 acgcagatga acaaggcaat gccgtctgaa gggctttcag acggcatttt gcgctatttt
     7801 gtgaaggtag ggatgacggt tcgggtattc ctgacagggt ggattttcaa ggtgttgtat
     7861 agggtgtagg aggattcgta aaaggtggga tgcagggtgt gcttcagccc gctgcatcaa
     7921 aaatttttgg agaatcggcg ggagtcggcg gttttggttt cggcggggac ggtggaaatg
     7981 ggtaacattg acggaatcga cggaagcggt gggcttcagc ccaccgcttg tatattggaa
     8041 tcaccgtatc atagcgccac ccgcgcccac ccaaggcaca caaccgttgc gtagctcagg
     8101 gagcggcagg gcaacccatc gacacaaccg gacagttgcc ggacaacaca accgaatgca
     8161 aggcaggttt atgatgagta cccaatacca ttacgcaggt atagtgaatt aaatctaaac
     8221 cagtacagcg ttgg
//
LOCUS       DAXHKG010000090         8135 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.090, whole genome shotgun sequence.
ACCESSION   DAXHKG010000090 DAXHKG010000000
VERSION     DAXHKG010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8135
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.090"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(68..292)
                     /locus_tag="ACFMWP_001512"
     CDS             complement(68..292)
                     /locus_tag="ACFMWP_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HFC5892093.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(293..1681)
                     /locus_tag="ACFMWP_001513"
     CDS             complement(293..1681)
                     /locus_tag="ACFMWP_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HFC5892094.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGMMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(1767..2588)
                     /gene="prmC"
                     /locus_tag="ACFMWP_001514"
     CDS             complement(1767..2588)
                     /gene="prmC"
                     /locus_tag="ACFMWP_001514"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC5892095.1"
                     /translation="MTFDEWLGLSKLPKNEARMLLQYASEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(3103..4587)
                     /gene="tldD"
                     /locus_tag="ACFMWP_001515"
     CDS             complement(3103..4587)
                     /gene="tldD"
                     /locus_tag="ACFMWP_001515"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HFC5892096.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      4765..4868
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            4935..6158
                     /gene="cytX"
                     /locus_tag="ACFMWP_001516"
     CDS             4935..6158
                     /gene="cytX"
                     /locus_tag="ACFMWP_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HFC5892097.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGVSANNISAKLSETPIAVAVAVVGTLLAVLLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            6155..7255
                     /locus_tag="ACFMWP_001517"
     CDS             6155..7255
                     /locus_tag="ACFMWP_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFC5892098.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNASAEHGSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVVGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSLARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALVDGKDAPERDEESGLAYIRRQD"
     gene            7276..7893
                     /gene="thiE"
                     /locus_tag="ACFMWP_001518"
     CDS             7276..7893
                     /gene="thiE"
                     /locus_tag="ACFMWP_001518"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HFC5892099.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGDE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAENPEAVVKAFQALWDG"
BASE COUNT         1735 a         2505 c         2205 g         1690 t
ORIGIN      
        1 cttaggtttg catcggcgga atattcaaac acagcctttt ttaaggaaat ccggatacgg
       61 cggcgcatca ataatgcggc ggaatctcgt cgcgcaggga atacggctct tgcgcgtcgg
      121 gattcctgtc ctgcattttt tgatacagca gcctcaactg agcctgctgc aaatccagcg
      181 tctgccgcaa ttccgccacc atcgcgttca ggccggcgat tacgtcctcc tgaagcgcgg
      241 attggatttc cagctctgtg atgcggtgtt ccaactcttg aaccgcgtcc atttacagca
      301 ccatcgcggc aatccagccg gcaatcagca gcgggatatt gtagtggatg aaggtcggga
      361 taacggaatc gcggatgtgg tcgtgttgtc cgtcggcgtt cagccccatc gtcgggccca
      421 acgtggaatc ggacgcaggc gaaccggcat cgcccaacgc ccccgccgtg ccgacgatgg
      481 cgacggtggc aagcggcgaa aaacccaaac cgacacacaa aggcacataa atcgcggcaa
      541 taatcggcaa agtggaaaag gacgaaccga tgcccatcgt taccaaaagc cccaccacca
      601 gcatcgccaa tgccgccata cctttgctgt tgccgaatat cgccatactg ctttccacca
      661 gcggctgaat atgcccggtc gcattcatca cggcggcaaa accctgcgcg gcaatcataa
      721 tgaagccaac catcgccatc atcttgatgc cttcgccgaa tacgtcgttt gccttgtcgc
      781 ggttgatgac gcccaacatc ataaatacgg cgaaaccgag catcgcgccc aacaccagcg
      841 agtcttcata catcaactgg atggcaaagc atacggcaat ggcggcggcg gcggccaggc
      901 tgcggtaggc ggacggctgc ggacggtttg ccgcatcggc gttgcccgcc gtatcggcat
      961 tgttgctttg gtacaggcgc ggtttgcggt aatggacaaa cgccagcagg agtccggcca
     1021 gcattcccaa cgcgggaatc gccattgccg ccattacgtt gatgtttttc acatcaagct
     1081 gcggcgcggc ggaatggatg ttgcccaaca ggatttcgtt caaaaaaatc gcgccgaagc
     1141 cgtaaggcag gaacatatag gtcgtaacca gcccgaaagt aatgacgcac gcaatcaggc
     1201 ggcggtcgat tttcaggcgg ttgaacacca aaagcagagg cggaacaatc atcgggataa
     1261 aggcaatgtg gatggggatg atgttctgac tcatcatgcc catcacaagg atgatggaaa
     1321 gcagcagcca tttgaccgcg ccctcgcccg aacgcacgct gtcgggcata ccgccccggt
     1381 tcagcttgcg gacgaccgcg ccggcaagct gctgcggcag gccggaatgg gtaatcgcca
     1441 ttgcaaacgc gccgagcatc gcataagaaa gcgcaatctt cgcaccgcct tccaaacctt
     1501 tgttgaacac ggggataatc cccgcctggc tgacctgtcc cgccgcatcg gcaatgtttt
     1561 gcagcggcat acccgccacc gcgccgccga caaacgcgcc gaccgtcagg ctcaatacca
     1621 cgtgcacgcg cgacagcgac agcaccagca taacgattac ggcaactacg actgcattca
     1681 ttgtttatcg ctccaaacct ataaatgttt acatatcgaa acacatcata acccaataac
     1741 ggaaaacccg ccaattttgc aaacaattat ttcaaatgct tcatatactt ccccagcgta
     1801 accctgtcca aacccgccaa gtccggcagg gtttccactc ccgaaaaacc attctccgcc
     1861 aacacgccgc gcaccgccgc gccctgatcg aaaccgtgtt ccagcaataa aaaaccgcct
     1921 tccgccaaac ggtcgggcgc gccttgcgcc aaggtgcgga tgcagcttag gccgtctgaa
     1981 aagtcggtca gcgcgatttg cggctcaaac cgcaaatcgc cttgcgacaa atgtttatca
     2041 ccgttttcga tatagggcgg gttggacacg atgatgtccc atttcccttc agacggcata
     2101 tcggtgtcga accacgaacc gtgtgcaaat tcgacccgcg cgcccaaatc cgccgcattt
     2161 ttccgcgccg tttcaaggga gggcgggctg atgtcggatg cgcgcacaaa cgcatcgggg
     2221 cgttcgagcg cgacggttac ggcaaccgcg ccgctgcccg tccccaaatc ccacacgcgc
     2281 ccgttttccg gcaggcgcgc caatacggct tcgaccaaat gttcggtttc ggggcgcgga
     2341 atcagcacat tcgggttgac ggcgaaacgc cgtccgtaaa actcgcgcca gcccaacaga
     2401 taggcaaccg gctcgccgtt cagacggcgt tgcgccagcc tgtccgcccg ctgtcggact
     2461 tcgtccggca tttcttcacc gccccgcgtc aacaactgca cgcgcgtata ttccgaagca
     2521 tattgcagca gcattcttgc ttcatttttg ggcagttttg acaagcccaa ccattcgtca
     2581 aacgtcattt ttatcccgtc tgccgctgat gcggcttttc tttccttatt ctttccggca
     2641 aacgtaccga tggtggcaac cgcaaatgcg gcataccaca aataaaatcc tgcaccgtag
     2701 cgcacaatat ccgatgtatt ccctgcttca tcgacgtata cggctttcac actgaaagcc
     2761 accaacgcca agccccaaag tgccgcatgg acaggcacga ccttcttccg caacgccagc
     2821 aaaacaatgg ccgccaacca aacataattc gcatagaccg cacaatacct gatatccaaa
     2881 gaagcaaata tcgaccccaa aatcaaaacg gtcaaaccct ccatgcttcc atgattgccc
     2941 aaataaaatg caacattgga taaagacgct atccacaggg caaccgacac cagcaacatc
     3001 actatgggaa aacttgattt ccgattctgt tcctgcatgg ttttatccta atgtaaaagg
     3061 ccgcctgaaa acctttcaga cggcatcgtg ccggattccg cgtcagattg cgctgccgcc
     3121 gacggtcagc ccggcatcga tacgcagggt cggctgcccc acgccgacgg ggacgctctg
     3181 cccttctttg ccgcacacgc cgacaccgct gtccaacgcg gtatcgttgc ctatcatcga
     3241 aacgtgtttc agcacttcgg gcccgttgcc gataatggtc gcgcctttga cggggtattg
     3301 cagcctgccg ccttccaccc accatgcttc ggacgcgctg aacacaaatt tgccgctggt
     3361 aatgtccacc tgtccgccgc caaagttgac ggcgtaaatg cctttgtcga tggacgcgat
     3421 gatttcttcc ggctcatagc tgccattttc cataaaggta ttggtcatgc gcggcatcgg
     3481 gacggaggcg tagctttcgc ggcggccgtt gccggtggat tgcgtacccg tcaggcgggc
     3541 attggtttcg tcctgcatat agccgactaa aatgccgtct tcaatcaata cggtgcggcg
     3601 ggtttcgttg ccttcgtcgt cgatgttgag cgaaccgcgc cggccggcaa tatcgccctg
     3661 atcgacgacg gtaacgcctt tggcggcgac gcgctcgcct attctgccgg aaaagacgct
     3721 ggtccccttg cggttgaaat cgccttccaa accgtgtccg accgcttcgt gcagcaacac
     3781 gcccggccag ccgttgccca aaacgacggt catttcgccg gcgggcgcgg ggcgggattc
     3841 gaggttggtg agtgcctgtt tgacggcggc atcgacaaac tgccgcacca agttttcatc
     3901 gaaataagcc aagtcgtagc gtccgccgcc gcccgcgctg ccctgttcgc ggcgttcgcc
     3961 ctgtttggcg atgacggtaa cgttcaggcg caccatcggg cggatgtcgg cggcgtgttt
     4021 gccgtccaga cgggcgaggt aaaccatatc gtattcgcag gtcaaaccgg ccatcacttg
     4081 cacgatgcgc ggatcggcgg ctttggcgat tgcttccact ttgttcaaca gcgcgacttt
     4141 ggcggcggaa tcgaggccgg caatggggtc ggacgcggaa caaaccggct tgccgcgcgt
     4201 ttcagacggc attttggcgg acaccttgcc gcctgccgcc ccaatcgcgc ggacggcgcg
     4261 ggcggaacgg tttatcgaat cgatgcacag gctgtcggcg taggcaaagg cggttttgtc
     4321 gcccgaaacg gcgcgcacgc ccacgccctg attgatttgg aagctgcccg atttgacgat
     4381 gccctcttcc aaatgccagc tttcataagc ggtgcgctgg cagtagatgt cggcgtaatc
     4441 gacgtggtgc gcgccgatga tgcacaggct tttggcgagc agttcggggg aaaggcggtt
     4501 ggcttcgagc agccgcgcct gtacggcgga ataggtcgga tgcatagtgt cggcgcataa
     4561 aaaatcaggg gcttgattat acggcatttg ttatatagtg gattaacaaa aaacagtacg
     4621 gtgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat
     4681 ttttgttaat ccactataga aatgcgccgt gccgcctgaa atgtaagatt tttgccaacg
     4741 ccccctgctt ttgtgtacac ttaaagctcc ttgtcggagt gccgccgccg ggcggctgag
     4801 attgcgaaag cagaatccgt agaacctgtc ggggtaatgc ctgcgtagga aacaaaccgt
     4861 caaatgcctt atcaggcttc cgttcccttt tccgcacttc cccgcccacc ttccttcttt
     4921 ttaaaggacg tcatatgtcg ggcaatgcct cctctccttc atcttccgcc gccatcgggc
     4981 tgatttggtt cggcgcggcg gtctcgattg ccgaaatcag cacgggtacg ctgcttgcgc
     5041 ctttgggctg gcaacgcggt ctggcggctc tacttttggg tcatgccgtc ggcggcgcgc
     5101 tgttttttgc ggcggcgtat atcggcgcac tgaccggacg cagctcgatg gaaagcgtgc
     5161 gcctgtcgtt cggcaaacgc ggttcagtgc tgttttccgt ggcgaatatg ctgcaactgg
     5221 ccggctggac agcggtgatg atttacgccg gcgcaacggt cagctccgct ttgggcaaag
     5281 tgttgtggga cggcgaatct tttgtctggt gggcattggc aaacggcgcg ctgattgtgc
     5341 tgtggctggt tttcggcgca cgcaaaacag gcgggctgaa aaccgtttcg atgctgctga
     5401 tgctgttggc ggttctgtgg ctgagtgccg aagtcttttc cacggcaggc agcaccgccg
     5461 cacaggtttc agacggcatg agtttcggaa cggcagtcga attgtccgcc gtcatgccgc
     5521 tttcctggct gccgctggcc gccgactaca cacgccaagc acgccgcccg tttgcggcaa
     5581 ccctgacggc aacgctcgcc tatacgctga cgggctgctg gatgtatgcc ttgggtttgg
     5641 cagcggcgtt gttcaccgga gaaaccgacg tggcaaaaat cctgctgggc gcaggtttgg
     5701 gtgcggcagg cattttggcg gtcgtcctgt cgaccgttac caccactttt ctcgatgcct
     5761 actccgccgg cgtaagtgcc aacaatattt ccgccaaact ttcggaaaca cccatcgccg
     5821 ttgccgtcgc cgttgtcggc acactgcttg ccgtcctcct gcccgttacc gaatatgaaa
     5881 acttcctgct gcttatcggc tcggtatttg cgccgatggc ggcggttttg attgccgact
     5941 ttttcgtctt gaaacggcgt gaggagattg aaggctttga ctttgccgga ctggttctgt
     6001 ggctggcggg cttcatcctc taccgcttcc tgctctcgtc cggctgggaa agcagcatcg
     6061 gtctgaccgc ccccgtaatg tctgccgttg ccattgccac cgtatcggta cgccttttct
     6121 ttaaaaaaac ccaatcttta caaaggaacc cgtcatgacc cgtatcgcca tcctcggcgg
     6181 cggcctctcg ggaaggctga ccgcactgca gcttgcagaa caaggttatc agattgcact
     6241 tttcgataaa ggctgccgcc ggggcgaaca cgccgccgcc tatgttgccg ccgccatgct
     6301 cgcgcctgcg gcggaagcgg tcgaagccac gcccgaagtg gtcaggctgg gcaggcagag
     6361 catcccgctt tggcgcggca tccgatgccg tctgaacacg cacacgatga tgcaggaaaa
     6421 cggcagcctg attgtgtggc acggacagga caagccatta tccagcgagt tcgtccgcca
     6481 tctcaaacgc ggcggcgtag cggatgacga aatcgtccgt tggcgcgccg acgacatcgc
     6541 cgaacgcgaa ccgcaactcg gcggacgttt ttcagacggc atctacctgc cgaccgaagg
     6601 ccagctcgac gggcggcaaa tattgtctgc acttgccgac gctttggacg aactgaacgt
     6661 cccttgccat tgggaacacg aatgtgcccc cgaagacctg caagcccaat acgactggct
     6721 gatcgactgc cgcggctacg gcgcaaaaac cgcgtggaat gcttctgccg aacacggcag
     6781 caccctgcgc ggcatacgcg gcgaagtggc gcgggtttac acacccgaaa tcacgctcaa
     6841 ccgccccgtg cgtctgctcc atccgcgtta tccgctctac atcgccccga aagaaaacca
     6901 cgtcttcgtc gtcggcgcga cccaaatcga aagcgaaagc caagcccctg ccagcgtgcg
     6961 ttccgggctg gaactcttat ccgcactcta tgccgtccat cctgccttcg gcgaagccga
     7021 catcctcgaa atcgctaccg gcctgcgccc cacgctcaac caccacaacc ccgaaatccg
     7081 ttacagcctc gcccgacgcc tgattgaaat caacggcctt ttccgccacg gcttcatgat
     7141 ttcccccgcc gtaaccgccg ccgccgtcag attggcagtg gcactggttg acggaaaaga
     7201 cgcgcccgaa cgtgatgaag aaagcggttt ggcgtatatc cgaagacaag attaaagccg
     7261 tctgaaagga accccatgac cttcccgccc ttgaaatccc cgctcaaatt ctacgccgtc
     7321 gtccccaccg ccgattgggt ggggcgcatg gtcaaagcag gtgccgacac ggtgcaactg
     7381 cgctgcaaga ccctgcacgg cgatgaattg aaacgcgaaa tcgcccgctg cgtcgccgcc
     7441 tgtcaaggca gccgtacgca gcttttcatc aacgaccact ggcgcgaggc aatcgaagca
     7501 ggcgcgtacg gcgtgcatct cggacaagaa gacatggaca ccgccgacct tgccgccatc
     7561 gccgccgccg gtttgcgctt gggtttgagt acgcactccg ttgccgaact cgaccgcgcc
     7621 ctgtccgtac accctagcta cgtcgccagc ggcgcgattt tcccgaccac gaccaagcaa
     7681 atgcccaccg ccccgcaagg cttggacaaa ctgtgcgagt atgtgaaaca ggcaggcggc
     7741 acgcccgtcg tcgccatcgg cggtatcgac ttgaacaacg cccgagccgt actcgccacc
     7801 ggcgtttcct cactcgccgc cgtccgcgcc gtgaccgaag cggaaaatcc cgaagcggtg
     7861 gttaaagcgt ttcaggcttt gtgggatgga taaaaccgaa agaagaaaat tcaatttgcc
     7921 gtgtcggcaa aacttagccc gttatcgcaa acatacttaa ctttaaatgt ggcatatcat
     7981 caaattccgt catttccgcg caagcgggaa tccgccttaa aacttgagaa accatcattt
     8041 gaaaaacagt ttccgaattt caaaaatgga ttcccgcctg cgcgggaatg acggcaaccg
     8101 gccggttgcg tatcaaaaaa taaagtaatt cggct
//
LOCUS       DAXHKG010000091         7936 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.091, whole genome shotgun sequence.
ACCESSION   DAXHKG010000091 DAXHKG010000000
VERSION     DAXHKG010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7936
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.091"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            342..1655
                     /locus_tag="ACFMWP_001519"
     CDS             342..1655
                     /locus_tag="ACFMWP_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HFC5892100.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1878..2053
                     /locus_tag="ACFMWP_001520"
                     /pseudo
     CDS             1878..2053
                     /locus_tag="ACFMWP_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2049..3299
                     /locus_tag="ACFMWP_001521"
     CDS             2049..3299
                     /locus_tag="ACFMWP_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC5892101.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQPAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVRGDVEVSADETEIYTLIKTFADNAVRYTPPEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERARVLDPFYRILGMEQQGTGLGLSIADTLATEYGRYL
                     ELSDSRRFGRGLLIRALLDKESLK"
     gene            complement(3333..4826)
                     /gene="rng"
                     /locus_tag="ACFMWP_001522"
     CDS             complement(3333..4826)
                     /gene="rng"
                     /locus_tag="ACFMWP_001522"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HFC5892102.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIDLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            5039..5296
                     /gene="grxC"
                     /locus_tag="ACFMWP_001523"
     CDS             5039..5296
                     /gene="grxC"
                     /locus_tag="ACFMWP_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HFC5892103.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5317..5760
                     /gene="secB"
                     /locus_tag="ACFMWP_001524"
     CDS             5317..5760
                     /gene="secB"
                     /locus_tag="ACFMWP_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HFC5892104.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5846..7888
                     /gene="recG"
                     /locus_tag="ACFMWP_001525"
     CDS             5846..7888
                     /gene="recG"
                     /locus_tag="ACFMWP_001525"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HFC5892105.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTATETLEQLQTALPELNIG
                     LVHGRMKAAEKAEVMAQFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
BASE COUNT         1671 a         2063 c         2337 g         1865 t
ORIGIN      
        1 actataaaat cccgcgtgta cggcacgccc cgcgctccgc aatgataggg gcggtttcgt
       61 ttgaatcggc gctccgcaat gataggggcg gtttcgtttg aatcggcgca ccgggatgaa
      121 tgcccccgcg ccgtcccgat accggtttgc cggttgttcc gtatcggttg ccgccgtgaa
      181 atgacggacg gatacaggaa tggcggcagg cgtaaatggg aggaaatgac cgattgactt
      241 gtttcaaaat aaaaaagtag aatgcaaggc ttatcccgcg tctgtgggcg gttttgcctg
      301 cacggtcggt tttctgttta aaataaaata aaggagaaat gatgctgacg tttatcggac
      361 tgctgattat cggggtcatc gtatggttgc tgctgacgga aaaagtgtcg cccatcatcg
      421 cattaatctt ggtgccgctg tttggggcgt tgctggcggg gtttgatgta tcccaattaa
      481 aagaatttta ttcgggcggc accaaatcgg tgatgcagat tgtgattatg tttatgtttt
      541 ccattttgtt ttttggaatc atgaacgatg tggggctgtt ccgtccgatg ataggcggtt
      601 tgattaagct gactcggggt aatatcgtgg cagtgagtgt ggggacggtc ttggtgtcgg
      661 tggtggcgca gttggacggg gcgggtgcga cgacgttttt attggtcgtc cccgcccttt
      721 tgccgcttta caagcgtctg catatgaatc cttacctgct gtttttgctg ctgacttcca
      781 gtgcgggatt gattaacctt ctgccgtggg gcgggccgac tgggcgggtt gcaagcgtgt
      841 tgggcgcaga tgtgggcgaa ttgtataaac ctttgttgac ggtgcaaatt atcggtgtag
      901 tgtttatcct tgcgctgtcc ctgcttttgg gtgtgcgtga aaaaaggcgg attgtccggg
      961 agttgggcgc gttgcccgcc gtggcggatt tgataaagcc ggtgcctttg tcggaagaag
     1021 aacaaaaatt ggcgcgtccg aaactgtttt ggtggaatgt cctgctgttt ttggcggcga
     1081 tgagcctgct tttttcgggc atcttcccgc cgggttatgt atttatgctg gctgcaacgg
     1141 cggcgttgct tttgaattac cgcagcccgc aggaacagat ggagcggatt tatgcccacg
     1201 ccggcggcgc ggtgatgatg gcgtccatta ttttggcggc aggtacgttt ttggggattt
     1261 tgaagggtgc ggggatgttg gacgcgattt ccaaagacct tgtgcatatc ctgccggacg
     1321 cgctgctgcc ttatctgcat attgccatcg gtgtgttggg cattccgctt gagttggttt
     1381 tgagtacgga cgcttattat ttcggactgt ttccgattgt ggagcagatt acctcgcagg
     1441 cgggcgtggc gcctgaagca gcaggttatg cgatgttgat cggcagtatc gtcggcactt
     1501 ttgttacgcc gctttcgccg gctttgtgga tgggcttggg tttggcgaaa ttgtcgatgg
     1561 gcaaacacat ccgttattcg tttttctggg cgtggggttt gtcgctggcg atattggcca
     1621 gttcgatagc ggcaggaatc gtgcctctgc cgtaaacggc gaagccgtct gaagcccgaa
     1681 tcgttcctgt ggtctgtcgc aggctctgcc tgcctgcccg tgtgttgcaa tcgcgcccca
     1741 atgccgtctg aaggcagttg ccggcgcggt ttttttgtgc tgcagttttg aaaaataccg
     1801 gcaagcgtaa agaccgctaa attgcggcta attttggggt gttagaatag gcacggttta
     1861 ttttgaaggg aaagttgatg cgtgttttgc tggtggaaga cgatgcgatg attgcggagg
     1921 cggtgtcggc aagtttgaaa gacggcggct atgcggtgga ttgggtcaaa aacggcgcgc
     1981 ggttgccgct gcccagcctt atgacttgat gctgctggat ttgggtttgc cggggcggga
     2041 cggtttggat gtttgttccg ctggcaatgc ttgcaggtat gttttcctac tacgaaacct
     2101 tccacgaaac ggaagcgttg caggacgacc tgctccgtca ggcggcattg tacgtcgccc
     2161 ccgattccaa acccgaaact ttgcccgagg gcgacggcga tacgcgtatt ttggtacaga
     2221 tgccgcagca ggaagaccct gttgtcagcc tgcctgcgca tctggcggac ggtctgcaca
     2281 cgcttcaggc ggacggggac gacgattatt accgcgtcta tatccgcacg accgaacagg
     2341 gacggattgc cgttatgcag gaaaacgaat accgtgaaga tttggcggcg gatgcggcac
     2401 ggcaaagcgt gttgcccctg ctggcggcac tgccgctgat gatactgctg accgtgtgga
     2461 ttacgcacaa agccatgcgc cccgtccgca aattgtcgca aagtctcgaa caacgccgaa
     2521 tcaatgacct gtctgctttg agtgtggaca atattcccag tgaaatcaga gggttcgtaa
     2581 ccgccatcaa cctgcttttg aaacgtgcgg atgaagacat ccgccaccgt cagcggtttg
     2641 tcgccgacgc ggcacacgaa ttgcgtacgc cgatgacagc cctttccctt caggcggaac
     2701 ggctcaacaa tatgtcgctc ccacccgatg cagcgcggca gcctgccgtt ttgcagcaga
     2761 gcatcaggcg caacaaacac ctgctcgaac agcttttggc actggcgcgt tcgcagtcgg
     2821 acgaaacccc tctgacgaaa acgacattcg gtctgcaaag ccgtttccgc caagtgttgc
     2881 aggaactgat gccgctggct ttggaaaaac gtcaggacat cggtgtggcg gtcagaggcg
     2941 atgtcgaagt gtctgccgac gaaacagaaa tctatacgct gattaaaacc tttgccgata
     3001 acgcggtacg ttacacgccg cctgaaggca ggatagattt gggtttcacg gacgaaggga
     3061 aatatcttgc cgtgtgggtg gaagataacg ggaacggcat tcccgaatcc gaacgcgccc
     3121 gcgtcctcga tccgttttac cgtattttgg gaatggagca gcaggggacg gggctggggc
     3181 tgtccatcgc cgacacgctt gccacagaat acggcagata tttggaattg tccgacagcc
     3241 gccggtttgg gcgcgggctg ctgatacgcg ccttgttgga caaggaatcc ctgaaataga
     3301 cagatgccgt ctgaaggctt cagacggcat ttttacatca aaacgatgtc gtattgttcc
     3361 tgcgtgtaag cggtttcgac tgccagagaa atcggtttgc cgatgaaatc tatcagcatt
     3421 gccaaggatt gcgattcttc gtccaaaaac aaatcgatga cgttgggggc ggcgaggatg
     3481 cggaaacttt cggcatcgta acggcgcgct tcgcggacga tttcgcgctg gatttcgtag
     3541 catacggttt gcggcgtttt cagacggcct ctgccttggc aggaagggca gggttcgcag
     3601 aggacttggt ttaagttttc gcgcgagcgt ttgcgcgtca gctcgaccag tcccaggctg
     3661 gtaaaaccgt gcagggtaac gcgggtacgg tcgaaggcga gggctttggc aagctcctgc
     3721 aacacggctt cgcggtggct ttcctgcgcc atatcgatga agtcgatgat gatgatgccg
     3781 ccgaggttgc gcagcctcaa ttcgcgggcg atggtgtggc aggcttcgag gttggtgcgg
     3841 aaaatcgttt catcgaaatt gcgtgcgccg acgaagccgc cggtgttcac gtctatcgtg
     3901 gtcatcgctt cggtggattc gataatcagg tagctgccga agttgaggtt gacgcgcggt
     3961 tgcagggcgc ggctgatttc ctgctcgacg ttgtgggttt caaatagcgg gcgttcgcct
     4021 ttgaacaatt ctatcctgcc caatgcgccg tggacgtatt gttcggcaaa acgcgtcatg
     4081 cggccgtggt ttacggtgga atcgacgagg attttttgcg tgtcgcagcc gaccatatcg
     4141 cgcaacacgc gcaaactcaa gggcaaatcc tgataaagca gggtttccgg cggccggatt
     4201 ttcgcctgtt cttggatgtg ttcccacact ttggtcaggt agtcgatgtc ggactggagc
     4261 tgttcgtcgg tggcgttttc ggcgttggtg cggatgatgt agccccggca ggcattttcc
     4321 ggcaggagct tgtcgaggcg ttcgcgcagg ctgctgcgtt cggcatcgtc ttcgatgcgt
     4381 tgggacacgc cgatgtggtc ttcttgcgga agatggacga ggaaacgccc cgccagcgag
     4441 atttgggtgg aaagccgcgc gcctttggtg ttgatcgggt ctttgatgac ctgcaccaaa
     4501 acagactgcc cttcaaacag catatgttcg atgcgctggg tttcttcggg gttgcggcgt
     4561 tgttcgagga catcgacgat gtgtaaaaac gccgcgcgtt ccaagtcgat gtcgataaac
     4621 gcgctctgca tcccaggcag cacgcggcgc accacgccca aatagatatt gccgactagg
     4681 ctgtgttcgc tgttgcgctc gatgtgcagc tcgcagatat tgttttcctc caacaccgct
     4741 acgcgcgttt cctgcggcgt gatgttgacc aatatcgttt cgggcgggcg cgcgatgtct
     4801 ttggggatgg ggagtcctga caacatggtt tttcctgaaa atgtaataaa aatattttgc
     4861 atccgttccg ccgcgcagcg cgggtgcaaa aatatttttc acaatgtcta tcatacttta
     4921 aaaaagaaac tttgacacat tccgcacatg ccgtttgaac gtgcatctgt tccgcacttg
     4981 ccaaacaggg gaaatgcccc tatattgatt atcattgcaa aactttcgga aacccaatat
     5041 gcagaccgtt accatgtaca caggtccgtt ttgtccctac tgcgcgatgg cgaaaaggct
     5101 gctgcacgcg gcaggtgtcg gacatatcga cgaaatccgt gtcgatgcaa gccccgaagc
     5161 ctttgccgaa atgcagcagc tttcgggaca gcgcagcgtg ccgcagattt tcatcggcga
     5221 aacgcacgtc ggcggattta ccgacctcta ccgcctccag caggaaggcg ggctggacgg
     5281 actgctgaac ccttaacccc caactaggaa aacaaaatga gcgaagaact gcaacccgta
     5341 ttcagcatcg agcgactgta tgtcaaagac ttgtctttgg aagtgccgca cgcgccgcaa
     5401 atctttttgg aacagggcga gcccgaagtg gatatgcgcg tttccaccgg cagccaaaag
     5461 ctggaagacg gctactacaa cgtggatgta accgttaccg taaccgccaa attggataac
     5521 gagcgcacga tgtttttgaa cgaagtaacc caaagcggta ttttccgttt ggaaaacatc
     5581 cccgaagaag atgtgcagct gctgctgggc gtggcgtgtc cgaacatcct cttcccttac
     5641 gcgcgcgaag ccgtttccgg tacggtaaca cgtgccggct tcccgcccgt cctgctcgcg
     5701 ccgattaatt ttgaggcgat ttaccaacaa cagcaggaag ccgaagccgc cggggcttga
     5761 ttcctgcctg ccgatgccgt ctgaatccgt ttcagacggt atttttgttt tcggataaaa
     5821 taggtgcgtt caaaggaatc tgcctatgat gtcgcccgaa acccagaaac agctcaaaat
     5881 caccgatgtt tccgccaaga agctcgacaa actcaacctc cataccgcgt gggatttggt
     5941 gttgcacctg ccgctgcgtt acgaggacga gacgcacatt atgccgatta aggacgcgcc
     6001 gattggcgtg ccgtgccagg tcgagggcga ggttatccat caggaagtaa cgttcaaacc
     6061 gcgcaagcag ttgattgtcc aaatcgccga cggttccggc agcgtccttt ttctgcgctt
     6121 catccacttt tacgccagcc atcagaaaca gacggcggtc ggcaaacgca tccgcgccgt
     6181 gggcgaaatc aaacacggct tttacggcga cgagatgatt catcccaaaa tccgcgatgc
     6241 cgagggcggc ggtttggcgg aaagcctcac gccggtttac ccgaccgtaa acggtttgaa
     6301 ccagcccact ttgcgccgta ttattcagac ggcgttggac gttacgccgc tgcacgacac
     6361 gctgcccgat gccctgctgt gccgtctgaa gctgccacac ctcgccgaaa gcctgcgtct
     6421 tttgcattcg ccgccgccga gtttcacgat tcatcagctt tcagacggca cgctgcctgc
     6481 atggcaacgg ctcaaattcg atgaactttt ggcgcaacag ctttcgatgc gcttggcgcg
     6541 acagaagcgt atcggcggca cggcggcggc attgggcggc gacggcacat tgacccaagc
     6601 cctgcgccaa gccctgccgt ttgccctgac cgatgcgcaa gaaaaagttg tttccgaaat
     6661 ctgccgcgat atggcgcaaa cctacccgat gcaccgcctg ctgcagggcg atgtcggcag
     6721 cggcaaaacc attgtcgccg ccttgtccgc gctgaccgcc atcgaatccg gtgcgcaggt
     6781 ggctgtaatg gcgcccactg aaatccttgc cgaacaacat tttattaaat ttaaacaatg
     6841 gctcgaacct ttgggcattg aagttgtccg cctttttggc agtttgcgta aaaaagccaa
     6901 agacgaagcc aaagccaaac tcgccgacgg cagcgtcaaa atcgccgtcg gcacgcacgc
     6961 cctgttttca gacggcgtgg cgtttcacaa tttgggcttg accattgtgg acgaacagca
     7021 ccgtttcggc gttgcccaac gcctcgccct caaaaacaaa gggcgcgaag tccatcagct
     7081 gatgatgtcc gccacgccca tcccgcgcac gcttgcgatg agttttttcg ccgatttgga
     7141 cgtgtccgtc atcgacgaat tgccgcccgg gcgcacaccg attaaaacgc gcctcgtcaa
     7201 caacgtccgc cgcgccgaag tcgaaggctt cgtcctcggc acttgccgaa aagggcggca
     7261 ggcgtattgg gtctgcccat tgattgaaga gagcgaaacc ctgcaactgc aaactgctac
     7321 cgaaacccta gagcagcttc agacggcctt acccgaactc aacatcggct tggtacacgg
     7381 gcgcatgaaa gccgccgaaa aagccgaagt catggctcag tttgccgcag gccgtctgaa
     7441 cgtcttggtc gccaccaccg tcatcgaagt cggcgtagat gtgcccaacg ccgccctgat
     7501 ggtgatcgaa cacgccgagc gcatgggctt ggcgcagctg caccaattac gcggtcgggt
     7561 agggcgcggc gcggcagaaa gcgtgtgcgt tctcctgttt gccgagccat tgagcgaact
     7621 cgccaaagcg cggttgaaag tcatctacga acacaccgac ggctttgaaa tcgcccgcca
     7681 agacctcaac atccgcggcc ccggcgaatt tctcggcgcg cgtcaaagcg gcgtgcctat
     7741 gctgcgtttc gccaagctcg aagaagactt acaccttttg gaacaagcgc gcgaaatcgc
     7801 cccgatactg attgagcaaa accccgaaat cgtcgaagcg catttggcaa gatggctttc
     7861 cggcagggaa gggtatttgg gcgtgtgagc aaaatgccgt ctgaaatatt agaaaaaaaa
     7921 gtgtaacgga aatctg
//
LOCUS       DAXHKG010000092         7900 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.092, whole genome shotgun sequence.
ACCESSION   DAXHKG010000092 DAXHKG010000000
VERSION     DAXHKG010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7900
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.092"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..219
                     /locus_tag="ACFMWP_001526"
     CDS             <1..219
                     /locus_tag="ACFMWP_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892106.1"
                     /translation="IHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFP
                     LFLKECEFRFNFGTPSQQLKILRDWCGI"
     gene            432..1967
                     /locus_tag="ACFMWP_001527"
     CDS             432..1967
                     /locus_tag="ACFMWP_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC5892107.1"
                     /translation="MSDSKTKERATFRTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1964..2056
                     /locus_tag="ACFMWP_001528"
     CDS             1964..2056
                     /locus_tag="ACFMWP_001528"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HFC5892108.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2116..3336)
                     /gene="lysA"
                     /locus_tag="ACFMWP_001529"
     CDS             complement(2116..3336)
                     /gene="lysA"
                     /locus_tag="ACFMWP_001529"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HFC5892109.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALN
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNVRNRAAEVLVDGGGYRLIRRR
                     ETLEQQMANELACL"
     gene            complement(3347..3517)
                     /locus_tag="ACFMWP_001530"
     CDS             complement(3347..3517)
                     /locus_tag="ACFMWP_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC5892110.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QSKPQSAPQTQK"
     gene            3588..3911
                     /gene="cyaY"
                     /locus_tag="ACFMWP_001531"
     CDS             3588..3911
                     /gene="cyaY"
                     /locus_tag="ACFMWP_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HFC5892111.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAEN
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3942..4361
                     /locus_tag="ACFMWP_001532"
     CDS             3942..4361
                     /locus_tag="ACFMWP_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HFC5892112.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCVNDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSREPT"
     gene            4383..4889
                     /gene="luxS"
                     /locus_tag="ACFMWP_001533"
     CDS             4383..4889
                     /gene="luxS"
                     /locus_tag="ACFMWP_001533"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HFC5892113.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            5035..7827
                     /gene="polA"
                     /locus_tag="ACFMWP_001534"
     CDS             5035..7827
                     /gene="polA"
                     /locus_tag="ACFMWP_001534"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HFC5892114.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVMEHAS
                     EIKGKVGENLRAALPRLPLSYDLVTIKTDVDLHAELSDGIESLRRTAPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDVFGSDSIGEQAALNAEMPSEKQAEKATAPERLDYQA
                     VTTEAQFAALLDKLSRANTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLGNPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQIGFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDEKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QQAYAAADQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVRNCLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDV
                     PLVAEVGVGENWEEAH"
BASE COUNT         1839 a         2127 c         2129 g         1805 t
ORIGIN      
        1 atccattacc gcatcaacca ttccaaggag tttgcagacc gtcagaacca cattaacggc
       61 attgagaact tttggaatca ggcaaaacgc gtcttgcgaa aatacaacgg aatcgatcgt
      121 aaatctttcc cgctgttctt gaaagaatgc gaatttcgat ttaacttcgg cacaccgtct
      181 caacagctta aaatcctgcg ggattggtgt gggatttagg gctaatctag tacagcccct
      241 aaaatttttc gttttcaagc cttcaccgct tgccatcagc gttaaatttt tttacgataa
      301 gcacatagat tgtaaacaat cggccacaag ccggtttgtt ttttcagaag acattatccc
      361 tgtcagacgc tatttctata tatttcgcct ataatggctt gtttttaata aataattcaa
      421 gaggtatcaa cgtgtctgat tccaagacga aagaacgcgc cacattccgc acgcgccgcg
      481 cgtttatgat tgccgccatc gggtccgccg tcggcttggg caatatttgg cgtttcccct
      541 atattgcttt tgaaaacggc ggcggcgcgt tcatcctgcc ctatctggtc gcgcttctga
      601 cggcgggcat cccgctgctg ctgctcgatt atgccatcgg ccaccgttac cgtggttctg
      661 cgcccttggc tttccgccgc ctcggacgat ggtttgagcc ggtcggctgg tggaacgtga
      721 tgaccaatat cgtcatctgc atctattacg cggtaattat cggttgggcg gcaagctata
      781 cctattattc ggtcaacgcc gcctggggtg cggatccgca gggttttttc tttaaggact
      841 tcctgcaaat ggcgggcccg gaagccttgg gtttggattt tgtcggcaaa gtcgccggtc
      901 ctttggcggg cgtgtgggtt tttaccgccg ccattatggc gttgggcgtg caaaagggcg
      961 tggcgcgcgc ctcgtcgttc tttatgccgc tgcttttggt gatgtttttg attatggtcg
     1021 gcatttcact aaccctgccg ggtgcggcaa agggcttgga cgcattgttt acgcccgact
     1081 ggtcgaaact cgccgattcc aaggtctggg tggcggcata cgggcagatt ttcttttcgc
     1141 tttccatctg cttcggcatt atggttacct attcttctta tttgaagaaa aaaaccgact
     1201 tgggcggaac ggggctggtg gtcggttttg ccaacagcag ctttgaactg ctcgcgggca
     1261 tcggcgtgtt tgccgcattg ggctttatgg cgcaggcggg cggcaaggcg gtcaacgagg
     1321 ttgcctcagg cggcatcggt ttggcgttta tcgcctttcc gaccattatc aaccaggcac
     1381 cgatgggctg gctgatcggc atattgtttt tcggttcgct ggtattcgcc ggcgttacgt
     1441 cgatgatttc catccttgaa gtgattgtgg cggcgattca ggacaagctg aacatcgggc
     1501 gcgtcaacgc cacgctgctg gtctgcattc cgatgggcat tgtttccacg ctgctgttcg
     1561 gtacggcgac ggggctgccg gttttggacg tgatggacaa attcgtcaac acctacggca
     1621 ttgttgccgc cggctttgtt tatgttgccg ccatcatcat tagcggcagg ctgccggaat
     1681 tacgcaagca cctgaacgct ttgtcctcca tccgcatcgg cggcttgtgg acggtctgcg
     1741 tcgtggttac cgtcgtgatg ctcggctata tgctgtttaa agataccagc ggcctgatgg
     1801 agaaaaatta cgaaggttat ccggatggtt tcctcagtat tttcggctgg gggatgtcgg
     1861 cggcgttggt cgtgttcggg ctgctgctgt cgttgctgcc ttggaaacac ggtcaggatt
     1921 tcaacgtcaa agacgaacac gaacatgaac aaggagaaga aaaatgagta cttccgccat
     1981 tgtgatgatg attgtctcaa tcgtgataat ctggggaggg ctgctgcttt ccctgttaag
     2041 gctgccgaac gagtaagcct ttagagcgtt aaaaatgccg tctgaactgt ttcagacggc
     2101 attttgatgt tcggcttaca ggcaggcgag ttcgtttgcc atttgctgtt ccaaggtttc
     2161 gcgccggcgg atgagccggt atccgccgcc gtcaaccaat acctccgccg cacggttgcg
     2221 cacgttgtaa ttgctcgcca tactggctcc gtatgcgccc gcgctacgga taagcagcaa
     2281 atccccttct tcgcaggcga tggtgcggtc tttgccgaga aagtcgccgg tttcgcaaat
     2341 cggaccgacg atgttggcgg tcagaggctc aatatctttg gtttcgaccg cctcgatgtg
     2401 atgataggca tcataaagcg ccgggcgcat caaatcgttc atcgccgcat cgaccatcac
     2461 aaagtttttc tcttcgccgt atttgacgaa ttcgacgcgt gtcagcagcg aacctgcgtt
     2521 gccgaccaag ctgcggccgg gctcaagaat gagtttcaga cggcgtgtgc cgatcagttt
     2581 ttgaacggct tgggcatacg cgcccaaatc aggcacatct tcgtcttggt aaacaatgcc
     2641 gacgccgccg cccaagtcca agtgttccaa cacaatgcct tcggcggcaa gcgcgtcaac
     2701 caaaatcaaa atgcgctcgc aggcttcgac cagcgggctt aagtcggtta gttgggagcc
     2761 gatgtggcag tcgatgccga tgattttcaa attgggctgt tgtgcggcgt ggcggtaggc
     2821 ttcgagcgcg tcggcataag caatgccgaa tttgttggct ttcagacctg tggagatgta
     2881 gggatgggtt ttcgcatcga catcgggatt gacgcgcagg gagacggacg cggttttgcc
     2941 taaacgcgcg gcaacttttt gaatacggtc gatttcggga atgctttcca tattgaagca
     3001 tttcacgccg gcattcagcg cgaactcgat ttctgcctcg cttttgccca cgcctgaaaa
     3061 tatggttttt gccgcatcgc cgcctgccgc caaaacgcgt gccaattcgc cgccggacac
     3121 aatgtcgaaa ccgctgccca gcgaggcgaa gtgtttgata atgctcagat tgccgtttgc
     3181 cttgacggcg taacagacga gcgggttcaa agcggcaaac gcggtttggt agtgttcaaa
     3241 tgcttcggtc agcgcggatt ggctgtacac ataaagcggt gtgccgaatg cttcggcaag
     3301 gcgggggtaa gggacttgtt cgcaaaatag ggtcatgttt tcgttttcat ttttgggttt
     3361 gtggagcgga ttgcggtttg ctttgaagct gcaaaccggt ttggattacg ccgaaacgcg
     3421 ccttgtcgcc ttctttgggc aggtagaggt cgcctttgta accgcaggcc gagagcagga
     3481 gggcggttgc cgccgcaaaa aatacgccgt atttcatcgg taaacttcct tcataagcgc
     3541 gaatgtggca agattcggca tcttaaacaa aaaacacgca aaaagctatg atgaccgaaa
     3601 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     3661 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccgaaaacg
     3721 gcacgcaaat catcgtcaac cgccacacgc ccaaccaaga attatggatt gccgccaaaa
     3781 gcggtggcta ccatttcgcc gaacaaaacg gcaaatggct ggcaacgcgc gacggacggg
     3841 atttttacga cgttttaaac gaagccctga gcgcggcttc gggcgaagcg gtagagattg
     3901 aggaattgtg attcaatttg atataaaaag attgttaccc aatggcacaa ttacctctat
     3961 atcggactgc cgaaatcgga aattttactg tcggcacgcc taaagtttta gaatcatttt
     4021 ccaaacatat cccttatggt gtcgtctttg aagacgacgg cgacacgggc tacttctatg
     4081 ctgcttcgca agacgggatt ttagatgcct tgcacatcta caatgtcgaa gatgtatccg
     4141 acaaacatat ccccaatcat gtcttgattt tatgggatga tgcctgcacc atagccgcat
     4201 tgtgtgtcaa cgactacatt catgccgtct atgattttgt cgaacaggca ggatattgcc
     4261 gcaacggctt ccctgaagca ggcggcgaat gggtgaaagt cgaaaaccgc gtcttggatg
     4321 atgaattgct ggacaaaatc ctatcccgag aacctacata accctcacaa aaggataccc
     4381 aaatgcccct actagacagt ttcaaagtcg atcacacccg tatgcatgcc cccgccgtac
     4441 gcgtggcgaa aaccatgacc acgcccaaag gcgacaccat taccgtgttc gacctgcgct
     4501 tttgcattcc caacaaagaa atcctgcctg aaaaaggcat acacacgctg gagcatttgt
     4561 tcgcaggttt tatgcgcgac cacttgaacg gcaacggcgt ggaaatcatc gacatttccc
     4621 cgatgggctg ccgcaccggt ttctacatga gccttatcgg cacgccttcc gaacagcagg
     4681 tcgccgatgc atggctcgcc tcgatgcagg atgtgggcaa tgtcaaagac caaagcaaaa
     4741 tccccgagtt gaacgaatac caatgcggca cttatcaaat gcactcgctc gccgaagcgc
     4801 agcaaatcgc gcaaaacgtg ttggcgcgca aagtggcggt gaacaaaaac gaagagctga
     4861 cgctggatga agggctgctg aacgcctaat ccgccaaaaa tgccgtctga acaagggttt
     4921 cagacggcat ttgccttttc cgttataatc cggggttgtg cggggtcggg ttttaagccg
     4981 gcatcgtcct tccctatttt tttctgtccc ttatcggttt taagcgggtt ttttatgtcc
     5041 aacagaccta cactcctcct cgttgacggc tcgtcctacc tctaccgtgc gtatcacgcg
     5101 atggggcaaa acctgaccgc ccccgacggc gcgccgacgg gtgcgctgta tggcgtattg
     5161 aatatgttgc gccgtttgcg gtcggaatat ccgcacgatt attgcgcggt ggtttttgat
     5221 gcgaaaggca aaaatttccg ccatcaaatg tttgaagaat acaaggcgac gcgcccgccg
     5281 atgcccgacg atttgcgccc gcaggcggaa gcactgccgg atttagtgcg cctgacaggc
     5341 tggccggtat tggtgattgg gcaggtggag gcggacgatg tgatcggcac gctggcgaaa
     5401 cagggggcgg aacatggttt gcgagtcatt gtttcgaccg gcgataagga catggcgcag
     5461 ttggtggatg agcgcgttac gctggtgaac acgatgagcg gagaaacgct ggatattgaa
     5521 ggcgtgaagg caaaattcgg cgtgcgcccc gaccaaatcc gcgattatct cgcgctgatg
     5581 ggcgacaagg tggacaacgt gccgggcgtg gaaaaatgtg gcccgaaaac ggcagtgaag
     5641 tggctggaag cctacggctc gttgcaaggc gtgatggaac acgcttcgga aatcaagggc
     5701 aaagtgggcg agaatctgcg tgccgccctg ccgcgcctgc cgctgtcgta tgatttggta
     5761 acgattaaaa ccgatgtgga cttgcacgcc gagctttcag acggcatcga aagcctgcgc
     5821 cgtaccgcgc cgaaatgggc gcaactggtt gtcgatttca aacgctgggg cttccgcacc
     5881 tggctgaaag aagcggaatc aaacatgaat accggctcga ccgatgatgt gttcggcagc
     5941 gacagcatcg gtgagcaggc ggctttgaat gcggaaatgc cgtctgaaaa acaagctgaa
     6001 aaagccaccg cccccgaaag gctggattat caagccgtta ccaccgaagc gcagtttgcc
     6061 gctttgttgg acaaactgtc gcgggcgaac acaatcggca tcgatacgga aaccacgtca
     6121 ttagacgcga tgaacgcctc gctggtcggc atcagcatcg ctttccaagc aggcgaagcg
     6181 gtttacatcc ccgtaggaca cagcctgacc gcagcgcctg aacagcttga tttacaagac
     6241 gtattaggcc gtctgaaacc gcatttggga aaccccgccc taaaaaaaat cgggcaaaac
     6301 ctcaaatacg accaacacgt tttcgccaac tacggcatcg ccctgaacgg cattgccggc
     6361 gacgccatgc tcgcttccta catcatcgag agccatctcg gacacggctt ggacgaattg
     6421 tccgaacgct ggctcggctt ggaaaccatt acctacgaat cgctgtgcgg caaaggcgcg
     6481 aagcaaatcg gttttgccga tgtcgccatc gggcaggcga ccgaatacgc cgcccaagac
     6541 gccgatttcg ccctgcgcct cgaagcgcac ctgcgcgcgc aaatggacga aaaacagctt
     6601 gaaatgtatg aaaaaatgga gctgcccgtc gcgcaggtat tgtttgaaat ggaacgcaac
     6661 ggcgtgcaaa tcgaccgcgc cgaactcgcc cgccaaagcg cggaactcgg cgccgagctg
     6721 atgaagctcg aacaacaagc ctatgccgcc gcagaccagc cgttcaacct caattcgccc
     6781 aaacagctgc aagaaatcct gttcgacaaa atgggcatcc ccaccaaagg cctgaaaaaa
     6841 accgccaaag gcggcatttc caccaacgaa gccgtgctcg aacagctcgc gcccgactac
     6901 cccctgccta aaatcatcct gcaaaaccgc agcctggcga agctcaaatc cacctacacc
     6961 gacaaactac ccgaaatgat ttcccccaag gacggccgcg tgcataccac ctacgcccaa
     7021 gccgtcgcca ttaccggccg cctcgccagc aacaacccca acctgcaaaa catccccatc
     7081 cgcaccgccg aaggccgccg cgtgcgccgc gcctttaccg caccgcaagg cagcgtcatc
     7141 gtttccgccg actattccca aatcgagctg cgcattatgg cgcacctctc cggcgacaaa
     7201 accctgattg ccgcgttcca aaacggcgaa gacgtacacc gccgcaccgc cgccgaagtg
     7261 ttcggcactg cgcccgaaaa cgtctcgtcc gagcaacgcc gctacgccaa aaccatcaac
     7321 ttcggcttaa tttacggtat ggggcaatac ggtttggcaa aatcattggg catcgacaac
     7381 ctttccgcca aaaactttat cgaccgctac ttcgcccgct accccggcgt cgccgaatac
     7441 atgcagcgca ccaaagaaca agccgccgcc caaggctacg tcgaaaccct gttcggcaga
     7501 aggctctatt tgcccgacat ccgcaacaaa aacgccaacg cccgcgcagg agccgagcgc
     7561 gccgccatca atgcccccat gcaaggcacc gcgtccgacc tcatcaaacg cgccatgata
     7621 gacgtgcgaa actgtctttc agacggcatc ggcagcaaac tggtcatgca ggtgcatgac
     7681 gaactggtgc tggaagtcgt tgaaaccgaa ctggattttg tcaaagaaaa actgccgcag
     7741 attatggcga aagtggacgg cggattattg gatgtaccgc tggtggctga ggttggcgta
     7801 ggggagaatt gggaagaggc acattgattg aaaggtgtta tatgctatct ttatttaaat
     7861 aaaatttaat ttttggtata ttttttctaa atgttcctat
//
LOCUS       DAXHKG010000093         7732 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.093, whole genome shotgun sequence.
ACCESSION   DAXHKG010000093 DAXHKG010000000
VERSION     DAXHKG010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7732
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.093"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="ACFMWP_001535"
     CDS             complement(79..1425)
                     /gene="mnmE"
                     /locus_tag="ACFMWP_001535"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HFC5892115.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1556..1711
                     /locus_tag="ACFMWP_001536"
     CDS             1556..1711
                     /locus_tag="ACFMWP_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892116.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1708..2139
                     /locus_tag="ACFMWP_001537"
     CDS             1708..2139
                     /locus_tag="ACFMWP_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HFC5892117.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2273..6637
                     /gene="app"
                     /locus_tag="ACFMWP_001538"
     CDS             2273..6637
                     /gene="app"
                     /locus_tag="ACFMWP_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HFC5892118.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFTYKIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFHD
                     NNNGTGKIDAKHEHNSLPNRLKTRTVQLFNVSLSETAQEPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGKVILDQQADENNKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDIATTGNNNSLDSKKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLNDHWSQKEGIPRGEIVWDNDWINRTFKA
                     ENFQIKGGQAVVSRNVAKVKGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEK
                     TITDDKVIASLTNTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNG
                     DLSLVGNAQATFNQATLNGNTSASGNASFNLSDHAVQNGSLTLSGNAKANVSHSALNG
                     NVSLADKAVFHFESSRFTGQISGSKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSATDAPRRRSRRSLLSVTPPASVESRFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAEKDNAQSLDALIAAG
                     RDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDTALAKQREAETRPATTAFP
                     RARRARRDLPQLQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAEDR
                     RNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDD
                     GIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGSKIRRRVLHYGIQARY
                     RAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHI
                     SITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAK
                     GPQLEAQHSAGIKLGYRW"
     gene            complement(6746..7468)
                     /locus_tag="ACFMWP_001539"
     CDS             complement(6746..7468)
                     /locus_tag="ACFMWP_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC5892119.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASVSLEDIQTILNLKRAYQYVISHISNGEPVNISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGIDYFGTHEDIDFPDPPNMG"
     gene            complement(7531..>7732)
                     /locus_tag="ACFMWP_001540"
     CDS             complement(7531..>7732)
                     /locus_tag="ACFMWP_001540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892120.1"
                     /translation="TIMQNHDKTGARLHKRMKSTDIQTQSFLAHFQRIVNAENFVNRF
                     FAQASASFRGMGNRIRKRTHAT"
BASE COUNT         2067 a         2154 c         1869 g         1642 t
ORIGIN      
        1 aaccaaacgg atcggattcc cgtttttatg ggataacgga atgttcagcc ggacaccgcc
       61 acgatgcttt cgatccgttt attttccgat acaaaacctc gaaaaaatca cgccgagcag
      121 gtcgtccgcc gtaaactcgc ccgtgatttc gccgcatgcg acctgcgcca agcgcaagtg
      181 ttcggcaaac agctcgattt gatggttgcc gcacaatgcc gccagcgaca attcttcctg
      241 cgctgctttg agtgcgttga cgtgccgcgt ccgcgccaaa aacagccctt cgccctcgcc
      301 ctgccatccg gcctcgcgca acaacgtccg tttcagcgcg tccaagccgt cgccggtttt
      361 cgccgacagc gcgatgacgg tttccgcgcc cgtaccgaac ccgcctgccg cgtgtgcgtg
      421 caaatcggat ttgctgtgga tttcgatgcg tttcaactcc ggcggcaacg cgtccaaaat
      481 cgcccgtgtc ttgtcgttca cgccttcgcg cggatcgacc aacaccagcg cgacatcggc
      541 ttcggatacg gctttgcggc tgcgttcgat gccgatgcgt tcgaccacgt cgtccgtctc
      601 gcgcaaacct gccgtatcga caatatgcac cggaacgccg tcaatcagga tacgttccct
      661 gaccgcgtcg cgcgtcgttc cggcaatatc ggtaacaatc gccacttcgt cgcccgccag
      721 cgcgttcaac aggctggatt tgccgacatt cggcgcgccg accaatacga cattcagacc
      781 ttcgcgcaaa atcgcgccct gctgcgcgtt ggcaagcaca tcatccacgg cgcggcgcaa
      841 gccgtccagt ttgccgcgtg cgtctgccgc ttcgagaaaa tcaatgtctt cctcgggaaa
      901 atctaacgtc gcttcgacca gcatccgcaa ggtaatcaag tcttcgacta gaccgtgtat
      961 ccgccgcgaa aaatcgcctt tgagcgagcg caacgccaga cgcgccgccg aacggctgga
     1021 tgcgtcaatc aaatccgcca cgccttccgc ctgtgccaag tccagtttgt cgtttaaaaa
     1081 cgcacgcttc gtaaactcgc ccggttcggc aaggcgcgcg cccaattcca aacagcggtt
     1141 cagcagcata tccatcacta ccggcccgcc gtgtccctga agctcgataa catcttcgcc
     1201 cgtaaaactt gccggtgcgg caaaaaaaag caaaagcccg ctgtcgattg cctgaccgtc
     1261 cgcgtccgta aaatcagcat aggttgccac gcgcggcttg ggcgttttcc cacacaaagc
     1321 ctctgccatc ggcagcaggt ttttccccga tatgcgtatc acgcccacgc cgccgcgccc
     1381 gggtgcggta gcgactgccg caatcgttgg aacgttatcc gacataaaac ccccgaaaat
     1441 tcaaaacagc cgcgattata gcaaatgccg tctgaagtcc gacggtttgg ctttcagacg
     1501 gcataaaacc gcaaaaatgc ttgataaatc cgtccgcctg acctaatata accatatgga
     1561 aaaacgaaac acatacgcct tcctgctcgg tataggctcg ctgctgggtc tgttccatcc
     1621 cgcaaaaacc gccatccgcc ccaatcccgc cgacgatctc aaaaacatcg gcggcgattt
     1681 tcaacgcgcc atagagaaag cgcgcaaatg accgaaaacg cacaggacaa ggcgcggcag
     1741 gctgtcgaaa ccgtcgtcaa atccccggag cttgtcgagc aaatcctgtc cgacgagtac
     1801 gtgcaaataa tgatagcccg gcgtttccat tcgggaccgt tgccgccgcc gtccgacttg
     1861 gcgcaataca acgacattat cagcaacggg gcagaccgca ttatggcaat ggcggaaaaa
     1921 gaacaagccg tccggcacga aaccatacgg caagaccaaa ccttcaacag gcgcgggcaa
     1981 ctgtacggct tcatcagcgt catcctgata ctgctttttg ccgtcttcct cgtatggagc
     2041 ggctaccccg caaccgccgc ctcccttgcc ggcggcacag tggttgcctt ggcgggtgct
     2101 ttcgtgattg gaagaagccg agaccaaggc aaaaattaat gacaaatcct agggcgtgct
     2161 tcatatccgc ccgaacgccg aaccgcacat ataggcacat cccgcgcgcc gcccggaagc
     2221 ggaagccgcg ccctcccaaa caaacccgaa tcccgtcaga taaggaaaaa taatgaaaac
     2281 aaccgacaaa cggacaaccg aaacacaccg caaagccccg aaaaccggcc gcatccgctt
     2341 ctcgcctgct tacttagcca tatgcctgtc gttcggcatt cttccccaag cttgggcggg
     2401 acacacttat ttcggcatca actaccaata ctatcgcgac tttgccgaaa ataaaggcaa
     2461 gtttgcagtc ggggcgaaag atattgaggt ttacaacaaa aaaggggagt tggtcggcaa
     2521 atcaatgaca aaagccccga tgattgattt ttctgtggtg tcgcgtaacg gcgtggcggc
     2581 attggtgggc gatcaatata ttgtgagcgt ggcacataac ggcggctata acaacgttga
     2641 ttttggtgcg gaaggaagca atcccgatca acatcgtttt acttataaaa ttgtgaaacg
     2701 gaataattat aaagcaggga ctaacggcca tccttatggc ggcgattatc atatgccgcg
     2761 tttacataaa tttgtaaccg atgcagaacc tgttgaaatg accagttata tggatgggcg
     2821 gaaatatatc gatcaaaata attaccctga ccgtgttcgt attggggcag gcaggcaata
     2881 ttggcgatct gatgaagatg agcccaataa ccgcgaaagt tcatatcata ttgcaagtgc
     2941 gtattcttgg ctcgttggtg gcaatacctt tgcacaaaat ggatcaggtg gtggcacagt
     3001 caacttaggt agtgaaaaaa ttaaacatag cccatatggt tttttaccaa caggaggctc
     3061 atttggcgac agtggctcac caatgtttat ctatgatgcc caaaagcaaa aatggttaat
     3121 taatggggta ttgcaaacgg gcaaccccta tataggaaaa agcaatggct tccagctggt
     3181 tcgtaaagat tggttctatg atgaaatctt tgctggagat acccattcag tattctacga
     3241 accacgtcaa aatgggaaat actcttttca cgacaataat aatggcacag gaaaaatcga
     3301 cgccaaacat gaacacaatt ctctgcctaa tagattaaaa acacgaaccg ttcaattgtt
     3361 taatgtttct ttatccgaga cagcacaaga acctgtttat catgctgcag gtggtgtcaa
     3421 cagttatcga cccagactga ataatggaga aaatatttcc tttattgacg aaggaaaagg
     3481 cgaattgata cttaccagta acatcaacca aggtgctgga ggattatatt tccaaggaga
     3541 ttttacggtc tcgcctgaaa acaacgaaac gtggcaaggc gcgggcgttc atatcagtga
     3601 agacagtacc gttacttgga aagtcaatgg cgtggcaaac gaccgcctgt ccaaaatcgg
     3661 caaaggcacg ctgcacgttc aagccaaagg ggaaaaccaa ggctcgatca gcgtgggcga
     3721 cggtaaagtt attttagatc aacaagcaga tgaaaataat aaaaaacaag cctttagtga
     3781 aatcggcttg gtcagcggca ggggtacggt gcaactgaat gccgataatc agttcaaccc
     3841 cgacaaactc tatttcggct ttcgcggcgg acgtttggat ttgaacgggc attcactttc
     3901 gttccaccgt attcaaaata ccgatgaagg ggcgatgatt gtcaaccaca atcaagacaa
     3961 agaatccacc gttaccatta caggcaataa agatattgct acaaccggca ataacaacag
     4021 cttggatagc aaaaaagaaa ttgcctacaa cggttggttt ggcgagaaag atacgaccaa
     4081 aacgaacggg cggctcaacc ttgtttacca gcccgctgca gaagaccgca ccctgctgct
     4141 ttccggcgga acaaatttaa acggcaacat cacgcaaaca aacggcaaac tgtttttcag
     4201 cggcagacca acaccgcacg cctacaatca tttaaacgac cattggtcgc aaaaagaggg
     4261 cattcctcgc ggggaaatcg tgtgggacaa cgactggatc aaccgcacat ttaaagcgga
     4321 aaacttccaa attaaaggcg gacaggcggt ggtttcccgc aatgttgcca aagtgaaagg
     4381 cgattggcat ttgagcaatc acgcccaagc agtttttggt gtcgcaccgc atcaaagcca
     4441 cacaatctgt acacgttcgg actggacggg tctgacaaat tgtgtcgaaa aaaccattac
     4501 cgacgataaa gtgattgctt cattgaccaa taccgacatc agcggcaatg tcagccttgc
     4561 cgatcacgct catttaaatc tcacagggct tgccacactc aacggcaatc ttagtgcaaa
     4621 tggcgataca cgttatacag tcagccacaa cgccacccaa aacggcgacc ttagcctcgt
     4681 gggcaatgcc caagcaacat ttaatcaagc cacattaaac ggcaacacat cggcttcggg
     4741 caatgcttca tttaatctaa gcgaccacgc cgtacaaaac ggcagtctga cgctttccgg
     4801 caacgctaag gcaaacgtaa gccattccgc actcaacggt aatgtctccc tagccgataa
     4861 ggcagtattc cattttgaaa gcagccgctt taccggacaa atcagcggca gcaaggatac
     4921 ggcattacac ttaaaagaca gcgaatggac gctgccgtca ggcacggaat taggcaattt
     4981 aaaccttgac aacgccacca ttacactcaa ttccgcctat cgccacgatg cggcaggggc
     5041 gcaaaccggc agtgcgacag atgcgccgcg ccgccgttcg cgccgttccc tattatccgt
     5101 tacacctccg gcttcggtag aatcccgttt caacacgctg acggtaaacg gcaaattgaa
     5161 cggtcaggga acattccgct ttatgtcgga actcttcggc taccgcagcg acaaattgaa
     5221 gctggcggaa agttccgaag gcacttacac cttggcggtc aacaataccg gcaacgaacc
     5281 tgcaagcctc gaacaattga cggtagtgga aggaaaagac aacaaaccgc tgtccgaaaa
     5341 ccttaatttc accctgcaaa acgaacacgt cgatgccggc gcgtggcgtt accaactcat
     5401 ccgcaaagac ggcgagttcc gcctgcataa tccggtcaaa gaacaagagc tttccgacaa
     5461 actcggcaag gcagaagcca aaaaacaggc ggaaaaagac aacgcgcaaa gccttgacgc
     5521 gctgattgcg gccgggcgcg atgccgtcga aaagacagaa agcgttgccg aaccggcccg
     5581 gcaggcaggc ggggaaaatg tcggcattat gcaggcggag gaagagaaaa aacgggtgca
     5641 ggcggataaa gacaccgcct tggcgaaaca gcgcgaagcg gaaacccggc cggctaccac
     5701 cgccttcccc cgcgcccgcc gcgcccgccg ggatttgccg caactgcaac cccaaccgca
     5761 gccccaaccg cagcgcgacc tgatcagccg ttatgccaat agcggtttga gtgaattttc
     5821 cgccacgctc aacagcgttt tcgccgtaca ggacgaatta gaccgcgtat ttgccgaaga
     5881 ccgccgcaac gccgtttgga caagcggcat ccgggacacc aaacactacc gttcgcaaga
     5941 tttccgcgcc taccgccaac aaaccgacct gcgccaaatc ggtatgcaga aaaacctcgg
     6001 cagcgggcgc gtcggcatcc tgttttcgca caaccggacc gaaaacacct tcgacgacgg
     6061 catcggcaac tcggcacggc ttgcccacgg cgccgttttc gggcaatacg gcatcgacag
     6121 gttctacatc ggcatcagcg cgggcgcggg ttttagcagc ggcagtcttt cagacggcat
     6181 cggaagcaaa atccgccgcc gcgtgctgca ttacggcatt caggcacgat accgcgccgg
     6241 tttcggcgga ttcggcatcg aaccgcacat cggcgcaacg cgctatttcg tccaaaaagc
     6301 ggattaccgc tacgaaaacg tcaatatcgc cacccccggc cttgcgttca accgctaccg
     6361 cgcgggcatt aaggcagatt attcattcaa accggcgcaa cacatttcca tcacgcctta
     6421 tttgagcctg tcctataccg atgccgcttc gggcaaagtc cgaacgcgcg tcaataccgc
     6481 cgtattggct caggatttcg gcaaaacccg cagtgcggaa tggggcgtaa acgccgaaat
     6541 caaaggtttc acgctgtccc tccacgctgc cgccgccaaa ggcccgcaac tggaagcgca
     6601 acacagcgcg ggcatcaaat taggctaccg ctggtaacac cggatatgcc gaaaggggtt
     6661 tgacgatgcc gccgtgcgct gtcaaaccct ttttctgccg ccgccttgtg cctgctccat
     6721 tgtctgataa ccgtcaaatt gatttttagc ccatgtttgg tgggtcgggg aaatctatat
     6781 cttcgtgcgt gccgaaatag tctatgcccg atatacaatt ttgatacaca aacttggaaa
     6841 tatcggtatc gtcgccggag cgatagaatg cggacagttt ttcattgaat tgcggcatct
     6901 gcatttcgga gatttccaag atgccgcagc cccccgccat catcagaccg ttggcaaata
     6961 aggttgccgt tcgtttgttg ccgtcccaaa aaacctgctg ccgcatacaa taaagcataa
     7021 aacggacggc tgcctccgtc gtcgaaccgc tttgcagtcc gatattttgt aacacgcggg
     7081 ccacttcaat ttccttcact ggattcgggg catgacggga accgtccaat agcgttacgc
     7141 cgaccgaacc ggtacggaaa tcaccgggtg ccaaagaatc gtccttggca acaatgttgt
     7201 tgattttttt aaggagtgaa atattgaccg gttcgccatt tgaaatatgc gaaatcacat
     7261 attgataggc acgtttcagg ttcaagatgg tttggatgtc ttcaagtgac acggaggcta
     7321 catttttgcc atggataatt tgttcggtct gcaataaggt cgtctgacaa ttctcaaaac
     7381 ggctgaggtt gtgaatttgg gcaaccaata ctttctttgc caaaaaaata ttttctttca
     7441 aactcaactt gtatttgtcg ggaaacacga taattcctta aataattaaa gcagtacgtt
     7501 aaatcatcat cttatcatca ctttcggggt ttatgttgca tgcgtccgtt ttctaatacg
     7561 gtttcccatc ccgcgaaacg aggcggaggc ctgtgcaaaa aacctgttca cgaaattttc
     7621 cgcattaacg atacgctgaa aatgcgctaa aaatgactgt gtttgaatat cggttgattt
     7681 catccgtttg tgtaacctcg cgccggtttt gtcatgattt tgcattatag tg
//
LOCUS       DAXHKG010000094         7718 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.094, whole genome shotgun sequence.
ACCESSION   DAXHKG010000094 DAXHKG010000000
VERSION     DAXHKG010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7718
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.094"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(212..1513)
                     /locus_tag="ACFMWP_001541"
     CDS             complement(212..1513)
                     /locus_tag="ACFMWP_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HFC5892121.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPNLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDGPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(1503..2414)
                     /locus_tag="ACFMWP_001542"
     CDS             complement(1503..2414)
                     /locus_tag="ACFMWP_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC5892122.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGSLVRLLPEYTVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            2522..2920
                     /locus_tag="ACFMWP_001543"
     CDS             2522..2920
                     /locus_tag="ACFMWP_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC5892123.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            2969..3574
                     /locus_tag="ACFMWP_001544"
     CDS             2969..3574
                     /locus_tag="ACFMWP_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC5892124.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALCAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            3760..5871
                     /locus_tag="ACFMWP_001545"
     CDS             3760..5871
                     /locus_tag="ACFMWP_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFC5892125.1"
                     /translation="MKISFHLALLPTLIIASFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGNLIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGMDYSREHRNPTLGYSRAFTASIDPYD
                     RASWPASGRLQPILTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GSSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSINTSSSAVFNAD
                     PEYTRQYETGVKSSWLDDRLSTTLSAYQIERFNIRYRPDEQNDPYTWAVGGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVMQAKVVEDKENPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAMLGWNHKNVNITFAAANLLNQKY
                     WRSDAMPGAPRTYTARVNYSF"
     gene            6074..6733
                     /locus_tag="ACFMWP_001546"
     CDS             6074..6733
                     /locus_tag="ACFMWP_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HFC5892126.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            6904..7599
                     /locus_tag="ACFMWP_001547"
     CDS             6904..7599
                     /locus_tag="ACFMWP_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HFC5892127.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT         1897 a         1956 c         2064 g         1801 t
ORIGIN      
        1 ctgtccttac tcggtgtggt ttggccgttg atttgtcctt tttcatcgac ttctattttt
       61 gccggcgatg ggaacggtgt cggcttgggt ggcggtgatt tgggcatacc tgatgattga
      121 aagtgaaaaa aacggaagat attgagtcat tcggacgcaa tgccgtctga aacggaagtt
      181 cagacggcat ttgttttagg ttccgtaccg cttagggaat accggcgaca ggataggcgg
      241 gatagccgtg ggtatcgacc gaacaggcaa accgccaagg cgtgtggacg gtgtcggcgg
      301 acaggtgggc gagttcggga atgtgccgtt tgataaaagt accgtccggg tcggtacggt
      361 atgaggcggc ggcaatgtcg gggcaggtgt gccgtgaggc ggcaagccac cagttgcctt
      421 ggttgattgc cgcatcgaaa tcggtcagct gccgggcaaa ccatatctcg ccttcgcggc
      481 gggggaggtt taaaacgtgg cagaaaaaat ccgcgctcaa gcgtctcagg gcggggtgga
      541 ggctgccggt tttgtgcaaa cagcgcatcg cggcatcgat aatcggaatg ccggtctggc
      601 cctgctgcca aagcgtcagg cgcagggtgt gttccggatt gccgtctgaa gggccgtcat
      661 ccgtgtgctg caaggcaagt tgaaggaaaa aatcgcggcg gatgatgttg tccgcccacg
      721 cgttcagacg gcgttcgagg ctttcccgcg cgagcaggcg cggcgagatg cagccggcac
      781 tcaaatacgc gcccatcagc gaagtgtgtt tgcgcgaggg gaaatccttt aaaacggagt
      841 aggaatccgc ctgttcgaga aaccgccgcc actgccgcca agccgccgtt tcgccgctgt
      901 tttgcggcag gaagatgccg tctgaaaggg cggcaggcgg cggggcggaa aggttttcgg
      961 ggaagggttg gcggtatgcc gcgaataggt tcggaccggc ggggggctgc ttggaaaagc
     1021 ggtcgagcca tacttcgcgg tagcggtcga aatcggtgtg tgccgtgccg ccgtcgggta
     1081 tcaggtcggt tttgccgaaa acggcgcggt cattgacgaa ggttaacgcg atgccgtgtt
     1141 tgtccaattc atgccaaagg gcgttgtcgg cgagtttgtc ggcaaaagta tgggattcgt
     1201 cggcgatgac ggcgcggata ttgaggcgga cggcgagccg gacgagctcg gcaggcgatg
     1261 ccgccgtgta gagcgggatg ccgcgccctg caagcccttg ggcgagttcg gcggcggatt
     1321 ggcggtagaa cgcggcgcgg cgagggttgt ctgtttcggc atcgtcaatc caaataccga
     1381 taacgggcaa accttcggca acggcggtgc ataaggcggc gttgtcgcgg atgcggaggt
     1441 tttggcggaa ccagacgagc gtgtgtgcgg cgcacgtgtc cgcataaagg gggcgggcgg
     1501 tttcagacgg catttcggca gcctttcctg ctggcgattt tttcgttcag aaaatcgatg
     1561 aagctgcgga ctttcgcgct taagaacgcc ctgtccgcat aaacggcatt caggcggtcg
     1621 gtcgggacgg tatattcggg cagcagcctc accagcgagc cgcagcgcaa atcgtgttcc
     1681 gccgcccaaa gcggctgata accgatgcac gcgcccgcct taatcatttc gcgcatcatc
     1741 agcgtgttgt cggtacggat gacgggggtc agttcaagcc ggtatttttt gccgtccgat
     1801 ttgcgggtga ggtcgagttt ctgctggttg gtgtaggtcg gcaggacggc gggcagcccc
     1861 gccacttctt ccggcgtttc cggtacgccg ttgcgcctca ggaaatcggg cgaggcgagc
     1921 agggcaaatt cgatttccgc cagcgggcgc gcaatcagcg acggggacag ggtttgggaa
     1981 acgcgcaacg ccaaatccac gccttcggca atcaaatcga cgtggcggtt gtccaaaatc
     2041 agttctaatg tcacttcggg ataacgttcg cggtattccg ccagccagtt gcatatctgg
     2101 ctgccggcaa accacagtgg catcgttacg cgcagcagcc cctgcggttt ttccgtcccc
     2161 ccggcggctt tttgcgcggc atcgtcgagc gtgtcgagcg cgtaactgca ttgccggtag
     2221 tattcttccc cggcttcggt caggctgagg ttgcggctgt tgcggtgcag gagtttggct
     2281 tggacggtgt tttccaagtg gctgacgtgt ttgcttgcca ttgcggtgga gatgccgagc
     2341 gcgtcggcgg cgcgggtgaa gccgccgctt tggacgactt ggcggaaaac cttgaggctg
     2401 aacagggtgt ccatattttc ttgtgtggaa aagttgtatc aataaaagca gtatatattt
     2461 gaaaagggga aacatctata ctctaccgcc tgaaatgaag acaaatatca aaggagcttt
     2521 tatgtccgat tgctgcaacc gtatccaacc ggttttgctt tctgttttgc gtatcgtaac
     2581 cgcttacctg tttttgttgc acggtacgtc gaaaatcttc gccttcccca ttgaaatggg
     2641 cagcggttcg cccggcgggc tgttgctgct tgccggtatt ttagaaattg tcggcggcat
     2701 tttgctggtg ttgggcctgt ttgcgcgccc tgccgcgttt gttttgtccg gccagatggc
     2761 ggttgcctat tttatggcgc acgcttccgg aaatgctttg ttcccgattg ccaacggcgg
     2821 cgagtccgca gtgctgttct gcttcgtatt cctctatatc gcggcggcgg gcggcggagc
     2881 atggtcgctg gacaggctgt ttttcaagcg taaagcctga atcagactgc ctaaagtgta
     2941 ttttgttgaa tgtttttgag gaaaagaaat gacccgtcaa tctctgcaac aggctgccga
     3001 aagccgccgt tccatttatt cgttaaataa aaatctgccc gtcggcaaag atgaaatcgt
     3061 ccaaatcgtc gaacacgccg ttttgcacac accttcttcg ttcaattccc aatctgcccg
     3121 tgtggtcgtg ctgtttggcg aagagcatga taaggtgtgg caatttgtcg aagacgcgct
     3181 gtgtgccgtc gtgcctgccg acagttttga accgaccgcg caaaaattga acctgtttaa
     3241 ggcgggtgcg gcaactattt tgttttatga agatcaaaat gtcgtcaaag gtttgcagga
     3301 gcagttccct gcttatgccg ccaactttcc cgtttgggcg gaccaggcga acgcgatggt
     3361 gcagtatgcc gtttggacga cacttgccgc ggtcggcgta ggtgcaaacc tgcaacatta
     3421 caatcccttg cccgatgcgg cgattgccaa agcgtggaat atccccgaaa actggttgtt
     3481 gcgcgcacaa atggttatcg gcggtattga aggggcggca ggtgaaaaga cctttgaacc
     3541 agttgcagaa cgtttgaaag tgttcggcgc ataatttcgc ggtcaaaaaa atgccgtctg
     3601 aaccctgttc agacggcatt tttcagtatc aggcggcgag ttttccgcat tctgagacct
     3661 ttgtttacaa atatcatgtt caatatagtt aaaagaaatt attctcattt cctccgtgag
     3721 gcaatataat tcggttgttt tgttaaattg agtataaaaa tgaaaatatc atttcattta
     3781 gctttattac ccacgctgat tattgcttcc ttccctgttg ctgccgccga tacgcaggac
     3841 aatggtgaac attacaccgc cactctgccc accgtttccg tggtcggaca gtccgacacc
     3901 agcgtactca aaggctacat caactacgac gaagccgccg ttacccgcaa cggacagctc
     3961 atcaaagaaa cgccgcaaac catcgatacg ctcaatatcc agaaaaacaa aaattacggt
     4021 acgaacgatt tgagttccat cctcgaaggc aatgccggca tcgacgctgc ctacgatatg
     4081 cgcggcgaaa gcattttcct gcgcggtttt caagccgacg catccgatat ttaccgcgac
     4141 ggcgtgcgcg aaagcggaca agtgcgccgc agtactgcca acatcgagcg cgtggaaatc
     4201 ctgaaaggcc cgtcttccgt gctttacggc cgcaccaacg gcggcggcgt catcaacatg
     4261 gtcagcaaat acgccaactt caaacaaagc cgcaacatcg gtgcggttta cggttcgtgg
     4321 gcaaaccgca gcctgaatat ggacattaac gaagtgttga acaaaaacgt cgccatccgt
     4381 ctcaccggcg aagtcgggcg cgccaattcg ttccgcagcg gcatagacag caaaaatgtc
     4441 atggtttcgc ccagcattac cgtcaaactc gacaacggct tgaagtggac ggggcaatac
     4501 acctacgaca atgtggagcg cacgcccgac cgcagtccga ccaagtccgt gtacgaccgc
     4561 ttcggactgc cttaccgcat ggggttcgcc caccggaacg attttgtcaa agacaagctg
     4621 caagtttggc gctccgacct tgaatacgcc ttcaacgaca aatggcgtgc ccaatggcag
     4681 ctcgcccacc gcacggcggc gcaggatttt gatcatttct atgcaggcag cgaaaatggc
     4741 aacttaatca aacgtaacta cgcctggcag cagaccgaca acaaaaccct gtcgtccaat
     4801 ttcacgctaa acggcgacta caccatcggc cgttttgaaa accacttgac cgtaggcatg
     4861 gattacagcc gcgaacaccg caacccgacc ttaggttaca gccgcgcctt tactgcttcc
     4921 atcgatccat acgaccgagc aagctggccg gcttcgggca gattgcagcc tatcctcacc
     4981 caaaaccgcc acaaagccga ctcctacggc atctttgtgc aaaacatctt ctccgccacg
     5041 cccgatttga aattcgtcct cggcggtcgt tacgacaaat acacctttaa ttccgaaaac
     5101 aaactcaccg gcagcagccg ccaatacagc ggacactcgt tcagccccaa catcggcgca
     5161 gtgtggaaca tcaatcccgt ccacacactt tacgcctcgt ataataaagg cttcgcgcct
     5221 tatggcggac gcggcggcta tttgagcatc aacacgtcgt cttccgccgt gttcaacgcc
     5281 gaccccgagt acacccgcca atacgaaacc ggtgtgaaaa gcagttggct ggacgaccgc
     5341 ctcagcacta cgttgtctgc ctaccaaatc gaacgcttca atatccgcta ccgccccgac
     5401 gagcaaaatg atccctacac ttgggcagtc ggcggcaaac accgttcgcg cggcgtggaa
     5461 ttgtccgcca tcgggcaaat catccccaaa aaactctatc tgcgcggttc gttgggcgtg
     5521 atgcaggcga aagtcgttga agacaaagaa aatcccgacc gagtgggcat ccatttgaat
     5581 aacaccagca acgttaccgg caacctgttt ttccgttata ccccgaccga aaacctctac
     5641 ggcgaaatcg gcgtaaccgg tacaggcaaa cgctacggtt acaactcaag aaataaagaa
     5701 gtgactacgc ttccaggctt tgcccgagtt gatgccatgc ttggctggaa ccataaaaat
     5761 gttaacatta cctttgccgc agccaatctg ctcaatcaaa aatattggcg ttcggatgcc
     5821 atgcccggcg cgccgcgcac ttatacggcg cgggttaatt acagtttcta atcccgttcg
     5881 tgcaacagaa tgccgtctga aaatcctgat aatccgtaaa ttcagcacac gaactttttg
     5941 acaggcttta tctacatcag tataatccaa aaagaaatag cgcccttggc agtacgcatt
     6001 acccattaaa tcatagcggg tatgccgatc ccaagggctt ttttatatct ttgacaaata
     6061 taggggaagc aatatgaaaa ccgccatttt gattgacggt gcatttttta ttaagcgggt
     6121 acggtcatta ggcctgtctc aaaatccaca cgatgcaaaa agaattgctg atttggcttt
     6181 ccgatattcg atgctgcatc tgaaagataa aatcaacggc acagatcaaa tggatgattt
     6241 atatagaatt ttcttttacg actgcgtgcc gtttgaaaag aaaatgcaca atcccgtatc
     6301 tcatcgtgcc atagattttt caaagactcc ggaagccata tttcgttgca atctgcatac
     6361 cgaattgaag aagaagcgta aattagcgtt acgtttaggc aagctgtcgg acaatacagc
     6421 atggatatta aaaccccaag tcatgaaaaa tcttctgaaa aacccgtcaa ctcaaattac
     6481 ggaaaacgat gtcgtgctcg atgttaaaca aaaaggtgta gatatgcgta taggcttgga
     6541 tatttcatct attaccttaa aaaaacaagc cgataaaatc atcttgtttt ctggtgattc
     6601 cgattttgtc ccagcagcca aattagccag acgggaaggt atcgatttta ttcttgatcc
     6661 tatgtggaat catgtcccac ctgacttaat ggaacacatc gacggattga agacaaaatg
     6721 tccgaaaccg taaattacta gaacaaaggc cgtctgaaaa taaggctaat tatctaagcc
     6781 atatttcaga cggcctttat aaaggctgaa ataaaactaa acacattttt tcactcaaat
     6841 cgaacacgcc ttcaataaaa tgccataaaa tccgcacatt aatctgacac acaagagata
     6901 cctatgaaac tgaaaacctt agctttgact tcattgaccc tgttggcatt ggccgcttgt
     6961 agcaaacagg ctgaaaccag tgttccggca gacagcgccc aaagcagctc atctgctccg
     7021 gcagcccctg ctgagttgaa cgaaggtgtg aactacactg tattgtctac gcctattccg
     7081 caacagcagg ccggtaaaat cgaagtattg gaatttttcg gctacttctg cccgcattgc
     7141 gcccatcttg agccggtctt gagcgagcac atcaaaacgt ttaaagacga tacctatatg
     7201 cgccgggagc atgtcgtgtg gggtgatgaa atgaaacctt tggcacgttt ggcggccgca
     7261 gtggaaatgg ccggtgaatc agataaagcc aacagccata ttttcgatgc gatggttaat
     7321 caaaaaatca atctggccga taccgatacc ctgaaaaaat ggctgtccga gcaaacagcg
     7381 tttgacggca aaaaagtatt ggctgcattt gaggctcctg aaagccaagc gcgtgcggct
     7441 caaatggaag agttgaccaa taaattccaa atcagcggca caccgactgt gattgtcggc
     7501 ggcaaatacc aagttgaatt taaagactgg cagtctggta tgaccacgat tgaccagttg
     7561 gtggataaag tacgcgaaga gcagaaaaag ccgcaataag ttgaggattg aatgagtaaa
     7621 ggccatctga aaataggatt tcagacggcc ttttgtattt aggctttata gaagagatga
     7681 ttgcttaaag ccttatggtt ttaaatcaga atatatag
//
LOCUS       DAXHKG010000095         7550 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.095, whole genome shotgun sequence.
ACCESSION   DAXHKG010000095 DAXHKG010000000
VERSION     DAXHKG010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7550
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.095"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..419
                     /locus_tag="ACFMWP_001548"
     CDS             <1..419
                     /locus_tag="ACFMWP_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFC5892128.1"
                     /translation="EAEWAGSLFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKA
                     AAAGHGILYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHG
                     NLGWLLFAAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="ACFMWP_001549"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="ACFMWP_001549"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HFC5892129.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIGATLADMAELFSERRLMLAREITKTFETFLSGTVGEIQT
                     ALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYNLALSWKNK"
     gene            1376..1723
                     /locus_tag="ACFMWP_001550"
     CDS             1376..1723
                     /locus_tag="ACFMWP_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HFC5892130.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1728..2321
                     /locus_tag="ACFMWP_001551"
     CDS             1728..2321
                     /locus_tag="ACFMWP_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HFC5892131.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDILVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2385..2993
                     /locus_tag="ACFMWP_001552"
     CDS             2385..2993
                     /locus_tag="ACFMWP_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HFC5892132.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3001..3651
                     /locus_tag="ACFMWP_001553"
     CDS             3001..3651
                     /locus_tag="ACFMWP_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892133.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRAVLLICI
                     TAIGALAIGIVSTFNPNGDKTLQAEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3691..4470
                     /gene="map"
                     /locus_tag="ACFMWP_001554"
     CDS             3691..4470
                     /gene="map"
                     /locus_tag="ACFMWP_001554"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HFC5892134.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGSVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4625..4924
                     /locus_tag="ACFMWP_001555"
     CDS             4625..4924
                     /locus_tag="ACFMWP_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC5892135.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5162..5536
                     /locus_tag="ACFMWP_001556"
     CDS             5162..5536
                     /locus_tag="ACFMWP_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC5892136.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5724..7190)
                     /locus_tag="ACFMWP_001557"
     CDS             complement(5724..7190)
                     /locus_tag="ACFMWP_001557"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC5892137.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSTPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1945 a         2290 c         1847 g         1468 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaggtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 attgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcaccgcgcg attggttgcc
      661 gtcggcagac aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt
      721 tttcgtaatt tcgcgcgcca gcattaatcg gcgttcggag aacagttccg ccatatcggc
      781 aagcgtcgca ccgatgcggt gcggcgtttc aaacatcacg acgggaaacg ccgcccgcac
      841 ccatttggca aacagtttcc tgcgctctcc cgatttcggc ggtacaaaac cgttgaaata
      901 aaaatcggat cccgccacac cggccacact caaagccgcc atcaccgcgc ttgcgccgac
      961 aacagggaca actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc
     1021 gcacacggcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata
     1081 gccgacaatc ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga caagtttgcc
     1141 ctgaatgccg tacgcgctca aaagctgcgc ggtaacgcgc gtgtcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgtcg gaggctttct gcaagtgttt
     1321 ctgaaacata aaaaatgccg tctgaaaaac agacattata aaggttaaac cgattatgcg
     1381 cctaaaccac aaacagggcg aggcagggga agatgccgcg cttgccttcc tccaatccca
     1441 aggctgcaca ctgcttgccc gcaactggca ctgcgcctac ggcgaaatcg acctgattgt
     1501 caaaaacggc ggcatgattc tgtttgttga agtaaaatac cgcaaaaatc ggcaattcgg
     1561 cggtgccgca tacagcattt ccccatccaa attattgaaa ctgcaacgaa gtgtagagta
     1621 ttatctgcaa cagaacaggt tgacaaacgt accgtgccgc ctcgacgcgg tactcatcga
     1681 aggcagccgc ccgcccgagt ggatacagaa tattacaggt tgacgatatg acgacattac
     1741 aagaacgcgt tgccgcccat tttgccgaaa gcatccgtgc caagcaggaa gccggaaaag
     1801 tattggtcga gccgaccgta caggctgccg agctgatgct gcaatgcctg atgaacgacg
     1861 gcaagattct ggcgtgcggc aacggcggtt cggctgccga cgcgcagcac ttcgccgccg
     1921 aaatgaccgg acgctttgaa aaagagcgca tggaactcgc cgccgtcgcc ctgaccacag
     1981 acacctccgc gctgaccgcc atcggtaacg actacggctt caaccacgtc ttcagcaaac
     2041 aggtacgcgc cctcggacgc gccggcgaca tcctcgtcgg catttccact tccggcaatt
     2101 ccgccaacgt catcgaagcc attaaagcgg cacacgaacg cgatatgcac gtcatcgccc
     2161 tgaccggccg cgacggcggc aaaatcgccg ccatactcaa agacaccgac gttctgctca
     2221 acgtccccca tccgcgcacc gcccgcattc aggaaaacca catcctgctg atacacgcca
     2281 tatgcgactg tatcgactcc gtactgctgg aaggaatgta acccttttca gacggcatgg
     2341 cgcaaagcaa tgccgtctga aacgcccaag aaaggaagcc cccgatgaaa cccaaaccgc
     2401 acaccgtccg caccctgatt gccgccattt tcagccttgc ccttagcggc tgcgtcagcg
     2461 cagtaatcgg aagcgccgcc gtcggcgcga aatccgccgt cgaccgccga accaccggcg
     2521 cgcaaaccga cgacaacgtt atggcgttgc gtatcgaaac caccgcccgc tcctatctgc
     2581 gccaaaacaa ccaaaccaaa ggctacacgc cccaaatctc tgttgtcggc tacaaccgcc
     2641 acctgctgct gctcggacaa gtcgccaccg aaggcgagaa acagttcgtc ggtcagattg
     2701 cacgttccga acaggccgcc gaaggcgtat acaactacat taccgtcgcc tccctgccgc
     2761 gcactgccgg cgacatcgcc ggcgacactt ggaacacatc caaagtccgc gccacgctgt
     2821 tgggcatcag ccccgccaca caggcgcgcg tcaaaatcgt tacctacggc aacgtaacct
     2881 acgttatggg catcctcacc cccgaagaac aggcgcagat tacccaaaaa gtcagcacca
     2941 ccgtcggcgt acaaaaagtc atcaccctct accaaaacta cgtccaacgc tgactcggca
     3001 atgccgtctg aaccgccttc agacggcatt gcccgacacc ccaaaagcac aatcaaaatg
     3061 gcaaaaaaac cgaacaaacc cttcaggctg acccccaaac tcctgatacg cgccgtattg
     3121 ctcatctgta tcaccgccat cggcgcattg gcaataggca tcgtcagcac attcaacccg
     3181 aacggcgaca aaacccttca agccgaaccg caacacaccg acagcccccg cgaaaccgaa
     3241 ttctggctgc caaacggcgt agtcggacaa gatgccgccc aacccgaaca ccaccacgcc
     3301 gcctcatccg aacccgcaca gccggacggc acagacgaaa gcggcagcgg actgccgtcc
     3361 cctgccgcac ccaagaaaaa ccgggtcaaa ccgcaacctg ccgacacagc tcaaaccgac
     3421 aggcagccgg acgacgccgg aacacaagct gaaaacacac tcaaagaaac ccccgtactg
     3481 cccacaaacg tcccccgtcc cgaaccccga aaagaaacac ccgaaaaaca ggcgcagccc
     3541 aaagaaacac ccaaagaaaa agaaacgccc aaagaaaacc ataccaaacc ggacaccccg
     3601 aaaaacacgc cgcccaaacc ccataaagaa attctcgaca acctcttctg acccggcacg
     3661 gcaggcacac ccgcaatcca aggaagcatt atgaacggca tcatcatcaa aacccccgaa
     3721 gaaatcgaaa aaatgcgcga gctgggcaaa ctcgtcgccg aagccctcga ctacatcgga
     3781 caattcgtca aacccggcgt aaccaccgac gaaatcgaca aactcgttta cgactaccac
     3841 gtcaacgtcc aaggcggcta tcccgccccc ctgcactacg gcaacccgcc ctaccccaaa
     3901 tcctgctgca cctccgtcaa ccacgtcatc tgccacggca ttcccgacga caagccgctc
     3961 aaagaaggcg acattatcaa catcgacctc accatcaaaa aagacggctt ccacggcgac
     4021 tccagccgta tgtttaccgt cggcaaagtc tcccccatcg cccaacgcct gatcgacgta
     4081 acccacgcct ccatgatggc gggcatagaa gccgtcaaac ccggcgcgac actgggcgac
     4141 gtaggttacg cctgccaaca ggttgccgaa aacgccggct attccgtcgt acaggaattc
     4201 tgcggacacg gcatcgggcg cggtttccac gaagccccgc aagtgttgca ctacggaaaa
     4261 aaaggacagg gctccgttct aaaaccgggt atgattttta ccgtcgaacc gatgatcaac
     4321 caaggcaaac gccacctgcg tatcctcaac gacggctgga cggtggttac caaagaccgc
     4381 tccctctccg cccaatggga acacgaagtc ttggtgaccg aaaccggcta cgaaatcctc
     4441 accgtcagcc ccgcctccgg caaaccctga agccggacgt atccgcccca taaaaacaaa
     4501 caatgccgtc tgaaagaaac ggcagatatg atatataata taaaaacagg cttgacccgg
     4561 cacattacga aaacaaagca aatcggaatt tgccccgcaa ccagacaaac ttaaaggaag
     4621 ttttatgaaa atatttgaaa atatagaaga tgttaaagcc atccgtaaaa agaccgggct
     4681 gaaccagata gacttctggg gcaaggtcgg cgttacccag tctggaggct cgcgctacga
     4741 aaccggccgc aaaatgccca aacccgtacg cgaactgctc cgcctcgtcc atatcgaatg
     4801 catcgatttg gcgaaagtca acaaaaaaga tatggaaatc gccgccctgt tgaaaaaaca
     4861 ccatcccgac ctgtatgccg agttgtccaa acagaccaag tccgaaagaa aaaaacaaag
     4921 ttaaaccgca acctccggat gcccgacagt ttttcatttc cgaaaaacgc aaacaatgcc
     4981 gtctgaaaca ccggacaggt cgccgtatcc cgcctgccgc ccctgcctca aaccgccgaa
     5041 ccgcccgaac ccgccttttt acaaacttta tccaatttcc tgtttatttc aggatacgcc
     5101 gacattagaa tgtcaaacag ctcgaaacgg gcaaactcca catccatcca aaggaataaa
     5161 aatgaaactt ctgaccaccg caatcctgtc ttccgcaatc gcgctcagca gtatggctgc
     5221 tgctgccggc acgaacaacc ccaccgttgc caaaaaaacc gtcagctacg tctgccagca
     5281 aggtaaaaaa gtcaaagtaa cctacggctt caacaaacag ggtctgacca catacgcttc
     5341 cgccgtcatc aacggcaaac gtgtgcaaat gcctgtcaat ttggataaat ccgacaatgt
     5401 ggaaacattc tacggcaaag aaggcggtta tgttttgggt accggcgtga tggatggcaa
     5461 atcttaccgc aaacagccca ttatgattac cgcacctgac aaccaaatcg tcttcaaaga
     5521 ctgttcccca cgttaatcag gcaacaaaaa acagcgtttt cagaaatgaa aacgctgttt
     5581 ttttgaccgt tccattattc gcaaaaggga aaaaacgatt acctgccccg tgtatcaaaa
     5641 cctgccctgc cggatgaagg gcataaccgg cagggacggc atcaacacca tatgggggta
     5701 cggcttttct tgaaagattc ggcttaaata tccaacactt tcgcggtata ggcgataatt
     5761 tcatccgccc tttcggggtt ttcgttcaac ttgatgccgt aacccggtac cagctctttc
     5821 agacggcctt cccaagacgg ggcgcgctcg gggaagcatt ggtgcatcag ccggatcatc
     5881 agcggcacag cagtcgatgc gcccggcgac gcgcccagca atgcggcgag tgagccgtcg
     5941 gcgtgggcga caatctccgt accaaactgg agcacgccgc ctttttcgga gtctttttta
     6001 atgatttgga cgcgttgccc tgcggtgatg agttcccagt cgtcggggtt tgcctcgggg
     6061 tagtattcca gcagggaggc gaagcgttct tctttggttt tacgcaattc gcccagcagg
     6121 tatttggtca gcggcatatt cgcccagccg gcgcacagca taggatagag gttgtccata
     6181 tggatggaca gcggcaaatc cataagcgag ccttgcttga ggaagttgga acggaagcct
     6241 gcataagggc cgaacataag gtggcgtttg ccgtccacgt tgcgtgtgtc gaggtgcggg
     6301 acggacatcg gcggcgcgcc gacggaagcc tgcccgtaca ctttggcgtt gtgttgttcg
     6361 gcggtttcag gggtgctgtt gcggaagaac aggccggaca cggggaagcc gccgtagcct
     6421 ttgccttcgg ggatgccgga tttttgcagc agggtcagcg cgccgccgcc cgcgccgagg
     6481 aagaggaagc gggtacggag ggtgagctgc ccgtcggggt tgcgggtatc ggcggttttg
     6541 agcacccacg cgccgtcgga ttcgcgtttg atgtcttcga cgtggcggtt gaactcggtt
     6601 tttacgccct tgccctgcaa atatttcacc atttggcgcg tcagccgtcc gaaatcgaca
     6661 tccgtgcctt cggcggagta gttggcggcg acgggttggt tttcgtcccg gccgcgcatc
     6721 atcagcggag cccaatcgga aattttgttc cgatcggtgg aaaattccat attttcaaaa
     6781 agtttttggg ttttaaacgc gtcataacgt ttttgaagat aagaacaatg gtcttcattc
     6841 atcaccaaag acatatgcgg cacggcattg atgaaggaat tgtcttccaa cttgccttcc
     6901 gcgaccaacg tcgcccaaaa ctggcggctg acatgaaact gttcggcaat attgagggcg
     6961 cgcgccggat cgataatccc atttgcaccc aacggcgcat agttcaattc gcacagcgcg
     7021 gaatgccccg tgccggcgtt gttccacgcg tttgacgatt ccaacgccac atcttccaag
     7081 cgttcaatca gggtgatttc ccaagacggt tcgagttctt tgagcaaaac gcccaaagtc
     7141 gcgctcataa tgccgccgcc caccaagaca acgtctgtcg cttcagccat ggtttactcc
     7201 taaaaaacag gcatcttctg cccttatggt tatttgccgt actacaaacg cctgaatcgc
     7261 aaaagcaggg aaaaccggca atggtgtgtg tccgagtatg ctgtttcggg gttggaatgc
     7321 gttgcaagta tggcttccga caccgcttca ggggcttgta atatgttatc gtgaatgtag
     7381 tggattttac tgggaaatgc aaagtttttc tgtcgcccgc caagcccggg aactgcgaaa
     7441 tgaaaaataa aaatagttat ttatctatat atatcaaatt tttaatagat aaaaaaccaa
     7501 aattgtttat atattaattt ttaaaagatt gtcagcatat tgcgttaagt
//
LOCUS       DAXHKG010000096         7527 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.096, whole genome shotgun sequence.
ACCESSION   DAXHKG010000096 DAXHKG010000000
VERSION     DAXHKG010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7527
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.096"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(104..2893)
                     /gene="ileS"
                     /locus_tag="ACFMWP_001558"
     CDS             complement(104..2893)
                     /gene="ileS"
                     /locus_tag="ACFMWP_001558"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HFC5892138.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVACQKKDFIRLGVLGDWDKPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVGYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGDHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKGELLSAEDCEHYDKLSDTMDVWFDSGSTHYSVVKQREELDWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYTFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGREGETRHYA"
     gene            complement(3034..3954)
                     /gene="ribF"
                     /locus_tag="ACFMWP_001559"
     CDS             complement(3034..3954)
                     /gene="ribF"
                     /locus_tag="ACFMWP_001559"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HFC5892139.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSDCFQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIEADMEAAKCW"
     gene            complement(4481..5776)
                     /gene="tyrS"
                     /locus_tag="ACFMWP_001560"
     CDS             complement(4481..5776)
                     /gene="tyrS"
                     /locus_tag="ACFMWP_001560"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HFC5892140.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVKSIR
                     SQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(5839..>7527)
                     /locus_tag="ACFMWP_001561"
     CDS             complement(5839..>7527)
                     /locus_tag="ACFMWP_001561"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC5892141.1"
                     /translation="FSLKAFYIRRIKRILPAFFAVLAATLIGGFFLFTKDDFFLLWKS
                     ALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVARKSPR
                     VQFGFLAALCALSLAASFMPSAFDKYYLPHLRACEMLVGSLTAVWMRYRQQRNLAVGR
                     CCAAAGALFSACILSACLFAYSKQTAYFPGPAALIPCLAVAALIYFNHYEHPLKKFFQ
                     WKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSTAAAIVLILLLSLISYHCIEK
                     PFKKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSCHNNTGK
                     QCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYASRVF
                     QNWAACRAVYRYAEEHLPLYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRMLHKLS
                     SEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANARIRELAAKYP
                     NVYIIDAAAYIPANFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHNH"
BASE COUNT         1659 a         1924 c         2155 g         1789 t
ORIGIN      
        1 gcaatcttga aacccctccg ccgttataaa gacaaattgc ggcacaaaaa atgccgtctg
       61 aaatgctgtt cggcggtttc agacggcatt tgctcaaact ttatcaggcg taatggcgcg
      121 tttcgccttc tctgccgaca ttctctgcac agcgtttgca gacggtttca tagcctgcaa
      181 ccgcgcccac atcgcgggtg tagtgccagc agcgttcgca tttttcacca tcactggctt
      241 tagcggcaac ggcaagttcg ctgcctactt tcacttctgc tttagacacc agcaaggcaa
      301 agcgcaattc ttcgcccaaa gcgttcaggt agccggccat ttcttccggc gcagtgattt
      361 cggcttcggc ttgcaaggac gaaccgacgg ttttgtcggc gcgcaaaggc tcgatggcgg
      421 cggttaccgc ttcgcgggct tcgcggattg ccgtccattt tttcaccagt tcggcttcgg
      481 ctttttcgtt gatggtcggg aactcgtgcc aggtgtggaa gaggacgctg tcttcttcgc
      541 cgccgccgat gatgtcccac gcttcttcgc cggtaaagca caaaatcggc gcaatcaaga
      601 gaaccaaact gcgcgtgatg tggtacaggg cggtttgcgc gctgcggcgg gcgcggctgt
      661 cggctttggt ggtgtagagg cggtctttca ggatatcgag gtagaacgcg cccaagtctt
      721 ccgagcagaa agaaacaatg tcttttacag caaagtggaa ggtatagcgc ggatagtaat
      781 cgcctgccag acgctcttgc agctgacgtg ccaataccac ggcgtagcgg tcgatttcca
      841 ccatgtctgc ctgttgcacg gcatcttcaa taggattgaa gtcgctgagg ttggcaaaca
      901 ggaagctcaa ggtgttgcgg atacggcggt agctttcggt tacgcgcttg aggatttctt
      961 tggaaatcgc caattcgccg ctgtaatcgg tggatgccgc ccacaggcgc aggatgtccg
     1021 cgccgaactc gttatacact tcttgcggcg cgacgacgtt gccgatggat ttcgacattt
     1081 tgcgcccgtt ttgatccacc acgaaaccat gggtcagcag ctgtttgtac ggcgcgcgac
     1141 ccattgatga ggcgcagccg gtcagcatgg acgactgaaa ccagccccgg tgttgatcgc
     1201 tgccttcgag gtacaagtca gcaggccagt ccaattcttc gcgctgtttc acaacggaat
     1261 aatgggtcga accggagtcg aaccatacgt ccatcgtgtc ggagagtttg tcgtaatgtt
     1321 cgcaatcttc cgcgctcaac aattcgccct tatcgaggga gaaccaagcc tcgatgcctt
     1381 tttcttcgat gcgttgcgcg actttttcca aaagttcggc agagttcgga tgcagctcgc
     1441 ccgtttcttt gtgaacaaag aaagtcatcg gcgtgcccca atagcgttgg cgcgaaacca
     1501 cccagtcggg gcggccttca atcatggctt ccaaacgcgc acgaccccat gatgggaaaa
     1561 attcagtgtc atcaacggct ttgatggctt tatcgcgcag ggttttacca tcggcacctg
     1621 ctttatccat accgacaaac cattggccgg tcgcacggta aatcaacggc gttttgtgac
     1681 gccagcagtg cgcgtagctg tgttcgattt tgctgcttgc caagaggttg ccggtttctt
     1741 ccaaccattg caggataacg ggattggcct cccaaacgct catgccggca acgcgcggcg
     1801 tttcactgat gtatttgcct tcggcgttga cggggttgta aagctcgatg ccgtatttat
     1861 tgcagacggc gtagtcttcc aaaccatgag caggcgcagt atgcaccaaa ccggtaccgg
     1921 cgtcggtggt aacgtggtcg ccgttgagca tgggaatatc gcgttcgagg aacggatgat
     1981 tcatgtgcag gttttccagc ttgtcgccgg tggtttcggc aagaatagca atgccgtctg
     2041 aaaaaccgta acgtttgagc gcgtcttctg ccaaatcttt cgccagcacc aatttgcctt
     2101 tgggcgtatc gattaattga tacaccacgt ccgcaccggc agacacggct tggctcgctg
     2161 gcagcgtcca aggcgtggtc gtccagatga cggcaaacgc tttgccctcg atgcctgcca
     2221 aaccgaatgc agcggcaagc gcagcggtgt ctttaaacgg atagcccacg tcaatcgcag
     2281 gcgatacttt gtctttgtat tccacttcgg cttcggccaa tgaagagccg cagtccaagc
     2341 agaactgaac cggtttcgcg ccgcggtaga gatagccgga tttgtagatt tcgccgagca
     2401 tacgcacggt atcggcttcg gttttaaaat ccatggtcag gtagggcttg tcccagtcgc
     2461 ccaacacgcc cagacggatg aagtcttttt tctggcaggc aacttgttcg gcggcatatt
     2521 cgcggcacaa ttcgcggaaa cgcgctttgg gcatgtcttt gccgtgcagc ttttctacca
     2581 tcacttcgat aggcaaaccg tgacagtccc aacccggcac ataaggcgcg tcaaaaccgg
     2641 cttgggtttt gctgcggata atgatgtctt tgagaatttt gttgacggcg tgaccgatgt
     2701 ggatgtcgcc gttggcatac ggcgggccgt cgtgcaggat gaacttcgga cgacctttgg
     2761 cgatttcgcg cagtttttgg tagcgttttt gctcgtacca gcttttcagc catgcaggct
     2821 cgcgcttggc aagattgccg cgcatcggaa acgggctttc gagcaggttt acggttttgc
     2881 tgtaatcggt cattttttaa tctctattgt tacaatattt cggttcagac ggcattgcgc
     2941 ctcaaacagt atttcacaac gggaaacccc tatgccgtct gaacagttaa aaggttgatt
     3001 gtagcccaat cggatggttt gtataaggtt tttctaccaa cactttgcgg cttccatatc
     3061 ggcttcaatc tgccttttca gttcttccat accgtcaaac ttttcctcat cgcgcagttt
     3121 gtgcaggaag cggacgttca accgttgtcc gtacaaatcg ccttgaaagt cgaacaggtg
     3181 gacttccagc ttttgaaaac agtcgctatc aacggtggga ttgaagccga agctcgccac
     3241 gccgcgccgc gtgccgaacg cgccgtccgc ttcgacgacg aacacgccgc cgagtgcata
     3301 acggtggcgg ggcaggcgga tgttggcagt cggggcgttt aaggtgcgtc cgagttttct
     3361 gccgtgcacc accctgccgc tcaagacgta gtcgtgtccc aaaagttttt tcgcataggc
     3421 aaggttgccg tctgaaaggg cttgtcgcac ggcggtactg ctggtgcgga tgtcttcgac
     3481 gatgacggaa ggcgtacgct cggtctgcat atcgggctgt tgtgccaaaa gttcaaaaca
     3541 gccttcccgc cccgcaccga aacggaaatc gtcgccgacg agcaaataac gcgtattcaa
     3601 ggtttgacgc agcaggcggt cgataaaccc ttgcgcggat atttcggaaa aattttgatc
     3661 gaaacgcaaa acccagacgg catcgacaca gcctgtgcct tccaataatt cgagcttggt
     3721 gcgcaggggg ctgatccgac acggtggcat cctgccggtg cggagtgcga aaaattcttt
     3781 gggttggggt tcgaaaacga cggtcacgac gggtaatccg cgcgtatcgg cttcgaggcg
     3841 gagtttttgg aggatgtgtt tgtgtccgag gtgtacgccg tcaaaattgc ctatggttac
     3901 ggcggccccg tgcggaaagt cgggcgcgtt gtgccgcccc agcctgattc tcattgttat
     3961 gttcgggtat gtggtgaaac aggcggtcat tgtaaacggt attgcggttt atagacagtg
     4021 tgccgcccgt tacgcccgcc cgacgcggga aaagtaggca aatttcccgc agccgaacgc
     4081 gccaaacgca taaagcgcgc agcaggcgcg gtgctatgtg ttgaaacatc gccccaaacc
     4141 tgatgcaaca tcagtgaaaa tcgttctttt ttaaccaggt aaaccgagac aagcaaccct
     4201 ccgccgtcat tcccgcgcag gcgggaatcc ggacctgtcc gcacagaaac ttatcggata
     4261 aaaacagttg ctcaaacccc gagattctag attcccactt tcgtgggaat gacggttcag
     4321 ttgcgttccg acaacaccgt aatcttgaaa ctcgtcattc ccgctcaggc gggaatctag
     4381 aacgtggaat ctaagaaacc gttttgcccg ataagtttcc gtgcggacag gtccggattc
     4441 ccgcctgcgc gggaatgacg gcatttctgc ggcaatcgga ttatttccaa accaaaagcg
     4501 cgtggttgcg tttgccgcgc cgaaggatgg tgtatttgcc gaaacgtttg tgttcgccgt
     4561 tcagcaggca ggcatcgtcg gggcgttcgg cggcgtggtt ggggttgttg gcttcggcag
     4621 gtttgccgtt gagcaaaacc gctttgctgt tcacaaagcc gcgcgcttct ttattggagg
     4681 atgccaaacc ggttttgacc aaggcttcga cgacattgat gccgtctgaa acttcaaatg
     4741 caggcaggcc gtcgagggcg agctgctcga agtcgctttc ggtcaggctg ctttggtctt
     4801 cggcaaacag gctttcggaa atgcgctgcg cggcggcaag ggcttcttcg ccgtgaatca
     4861 ggcgggtcat ttcttcggcg aggatgcgtt gcgcttcggg cttgctgccg ctggctttat
     4921 ctttcgcttc gatagcgtcg atttcttcga tggacaggaa ggtaaagtat ttcaggaatt
     4981 tatacacatc ggcatcggcg actttcagcc agaattggta gaactgatag ggcgaggttt
     5041 ttttcgcgtt cagccacacc gcgccgcctt cggttttgcc gaatttggtg ccgtctgatt
     5101 tggtaaccaa aggcagagtc agtccgaaca cttgtttttg gtacaggcgg cgggtcaggt
     5161 cgataccggc agtgatgtta ccccattggt cggagccgcc gatttccaaa accgcgccgt
     5221 ggcgtttgtt caactcggcg aagtcgtaac cttgcagcag ggaataggcg aactcggtga
     5281 aggaaatgcc tgcgccgtcg cggtcgatgc gctgtttgac ggattctttg ttcagcatgg
     5341 cgttgacgga gaaatgcttg ccgatgtcgc gcaggaagtc gaggcagttc attttgccga
     5401 accagtcggc gttgttcgcc ataatggcgg cgtttccgcc ttcaaagctc aagaaagggg
     5461 ttaattggct gcggatgctt ttcacccagc cggcaacggt ttcggcggaa ttcaagctgc
     5521 gttcggcggc tttgaagctg gggtcgccga tcataccggt cgcaccgccc accagtgcaa
     5581 tcggcgtatg ccccgcctgt tggaagcggc gcaatgccaa tacgggcagc aggtgtccga
     5641 tgtgcaggct gtcggcggtc gggtcgaagc cgcaataaag ggaaattttt tgttcgttca
     5701 acaaagcgtc taaggcttcg atgtcggtgg tttgcgcgat taggccgcgc gattgcaggt
     5761 cttggatgac gctcatcggt ctctttcaaa aaaaattagc ggttttgcaa accgccgatt
     5821 gtaacaaatt taagcgaatc aatggttatg gcgcgtatcg agaaaccgtt gtttttcgga
     5881 aaaacgcttc gccaattccg tgccgccgta agggttgatg tggtctttgt ccgagtaaac
     5941 cggcaatccg ccgatttgga aatttgcggg gatataggcg gcggcatcaa taatatagac
     6001 gttggggtat ttggctgcca attccctgat gcgtgcattg gctttcagag tgctttcgtc
     6061 gtccgggcgc agggtttggc ggtaacccgg tatgcgtgaa gacaagatat aggcgcgttg
     6121 tacgttgtaa gacgaggcaa ggttgtccgc catcaggtaa acggcttgtt tttcggatga
     6181 gagtttgtgc agcatacggt cgaatttttg gaaaaaaccg gcatcgtagg caagggagcg
     6241 gctgttttcg ggcatttggc tgccccagcg catcgccaaa accacttttg aatacagggg
     6301 caggtgttct tcggcatagc ggtaaacggc gcggcaggcg gcccagtttt ggaacacacg
     6361 ggacgcgtag ccttccacat aggcgcaagc gtcggcggaa accatagtgg cggaccattt
     6421 ttcttttttg cccacggcat cgaagaatgt tttgtaatgg tcggcgtggg agtcgcccaa
     6481 aaccagcagc tccggctgtt tttccgtatc cccccacagg cattgtttgc cggtattgtt
     6541 gtggcaggag gtgttggaac gcgtcagccc caagcggtcg tattgcgcca taaacggcag
     6601 cctcatcgcg aaaaacgagc ccgcccccaa aatgagcata ggcaaggcat aaatccataa
     6661 aacggattgt gcgaacgaac ctttccattt tttaaacggc ttttcgatgc agtgataaga
     6721 aatcagggaa agcagcaata tcaggacgat tgctgccgct gttgaataag gcggcaggtt
     6781 gtccgggccg atatagcgca taaaggccaa tatcggccaa tgccacagat aaagcgaata
     6841 ggaaatcaaa ccggcggcaa cagtgatttt ccattggaaa aattttttaa gcgggtgttc
     6901 gtaatgattg aaataaatca gcgcggcaac agccagacag ggaatcaaag cggcgggtcc
     6961 cgggaaatag gcggtttgtt tcgaataggc aaacaggcag gcggacagta tgcacgcgga
     7021 aaacaatgcg ccggcggcgg cacagcatct gccaacggcg agattccgct gttgccggta
     7081 ccgcatccac acggcggtca gcgatccgac cagcatttcg caggcgcgca ggtggggcag
     7141 gtaatattta tcgaacgcgg aaggcataaa ggaagcggca aggcttaagg cgcacaatgc
     7201 ggcgaggaag ccgaactgta cgcgcgggct tttgcgggcg acaagcagca gcaatatcgg
     7261 aaagacaaag taaaattgtt cttcgaccga caaagaccaa atgtgcagca agggcttttc
     7321 ttcctgcgcg ggatcgaaat aatccttccc ccttgcaaaa tacaggttgg aggcgaaacc
     7381 caaggcggtc agcgcggatt tccacaaaag aaagaaatca tctttggtga ataaaaagaa
     7441 gccgcctatc agcgttgccg ccaatacggc gaaaaatgcg ggcaaaatcc gtttgatgcg
     7501 gcggatataa aatgccttca gggaaaa
//
LOCUS       DAXHKG010000097         7479 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.097, whole genome shotgun sequence.
ACCESSION   DAXHKG010000097 DAXHKG010000000
VERSION     DAXHKG010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7479
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.097"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(16..771)
                     /locus_tag="ACFMWP_001562"
     CDS             complement(16..771)
                     /locus_tag="ACFMWP_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HFC5892142.1"
                     /translation="MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(896..2055)
                     /gene="nirK"
                     /locus_tag="ACFMWP_001563"
                     /pseudo
     CDS             complement(896..2055)
                     /gene="nirK"
                     /locus_tag="ACFMWP_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
     gene            2429..4684
                     /locus_tag="ACFMWP_001564"
                     /pseudo
     CDS             2429..4684
                     /locus_tag="ACFMWP_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
     gene            4863..5396
                     /locus_tag="ACFMWP_001565"
     CDS             4863..5396
                     /locus_tag="ACFMWP_001565"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HFC5892143.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5459..6643)
                     /locus_tag="ACFMWP_001566"
     CDS             complement(5459..6643)
                     /locus_tag="ACFMWP_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HFC5892144.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6683..7087)
                     /locus_tag="ACFMWP_001567"
     CDS             complement(6683..7087)
                     /locus_tag="ACFMWP_001567"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HFC5892145.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1654 a         1826 c         2090 g         1909 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aagttgtgca agacatattt
       61 ggattgcagg ctggtgcgga tgccgtagcg gaggaaggcg gcatagttgg acgagtcgct
      121 cgacccgata gacgcgccgc tgcaaaacat ttgcgcgttg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagcccg tgcatatcat aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggcctttc cgtccgccgt cggcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cggcgcaata
      421 ggcgttggcg gcaaaccagg aaacatttgt taccggttgt tttaattcgc ccgccttcgg
      481 cgcatagctg cggctgccgt ttttcatcca atgcttcagg taagcgggtt ctgcctgttt
      541 ggaaccgatc ctgccttttt gccattgggg gtggctgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgagtgccg gcgagtgccg cgccgaggaa aaataaccgg acatacttca taaagcctcc
      781 tgacaggcgg ttaaaatcaa tcttccgaaa ggaaagattg gttgttaaaa aaccactgcc
      841 gtgcgtaatg aagtacagcg gcagtggttc gtcccgctaa tgacgggtat ccaatttaat
      901 aaacgctttt ttcggatgca gaggctgccg gggcagaagc tgcgggagcg gaagcagcag
      961 gagctgcacc gttaccggcg taagcggtat cactcaattt ttgagtcatg atttcagggt
     1021 tttccgcacc ctctactttc aattggccca acgcgccttt gttgaatgcg cggaagatgg
     1081 agtggtcgac caaagtgtag ctgcccggga tgtcgacttt gaattcgacg atggcggaac
     1141 cgccggcagg aacgatggtg ctttgtacgt tttcgttaat cagcttgccg ccttccacat
     1201 aaactttgtc gaagatttcg ccgatgacgt ggaaggaaga cactaggttc ggaccgccgt
     1261 taccgacgta catacgcacg gtttcgcctg ctttggcttt cagcgcgtta tcgccggcga
     1321 tagaacctac atgaccgttg aatacgacgt attcaggctg ttcggcaacg gctttgtcca
     1381 tatcgaacgg ttgcaggcct tgcgcgcctt ttttgccttt ggtgtagaag tcgccttgga
     1441 cgatgtagaa ctctttatcc actttcggca gaccttcttt aggctcgacc aaaatcagac
     1501 cgtacatacc gttggcgatg tgcataccga ccggcgcgac ggcgcagtgg tagatgtaca
     1561 gacccggttg cagggctttg aagctgaatg tggaagtgcg gcccggggcg gtaaaggttg
     1621 cggctgcacc gccgccctga ccggttgcgg cgtggaagtc gacgttatgg ggaacggtag
     1681 aagacgggtt gttggaaaat tccacttcaa ccgtatcgcc ttcgcgtacg cggatcatgc
     1741 gacccggaac gtcgccgtca aatgtccagt agcggtattc cacaccgtct tccatggtca
     1801 tggtttttcg acagtttcca tttttacgcg gactttggca ggatagtcgc ggtcgattgc
     1861 gggaggtact tcaggagcgt gggtggtaac tgcatcgata acgggcagtt cgcctgtcgg
     1921 cgtttcggcg gcggtttgtg cggcggaact tgcggcttct gcggaagcgg caggggcttg
     1981 cgcggcaggt tcgccgccgc aggcggctaa tgcgaataag gaagcaatca ttgcagctaa
     2041 ggcttggcgt ttcataatgt tttccttttg taagaaaagt agaggaattg gttaagaact
     2101 tggtgtgatt atgcgtttgc cccattgggg gcattttgat ttaagtcaaa taattcataa
     2161 aatatgaact taaaatgata cttctaatac tttatagcta ctaaaaatta caatgaatag
     2221 gctgatttgc ttaagggctt cggcaaatca ggcaaaggca gggtagttgc cgactaaaga
     2281 aaatgatagt tattatcata tatgtatttg ttttatatgt gagtttcttt gaacaaatgt
     2341 ttatttgtgc gctaaaccgt gctacaatct ttaacattca tattctgtga attttaaaca
     2401 accactttta ccaaaaggag ctctaaaaat gggacagtac aagaagctat ggtacttgct
     2461 gtttgccgtt ctggcggtat gctttaccat tcttggctat atgggcagcg aggtttacaa
     2521 aaaagccccg ccttaccctg aacaggtcgt ttccgcatca ggcaaagtgc tgatgacgaa
     2581 agacgatatt ttggcaggtc agtctgcgtg gcagagtacc ggcggtatgg aagtcggttc
     2641 gattctgggt cacggcgcat atcaggctcc ggactggacg gccgactggc tgcatcgtga
     2701 gttggttgca tagttggatt tgaccgcgca acagacttac ggcaaaaaat tcgatgaagt
     2761 ttcccctgaa gaacaagccg ttctgaaaac ccgactggct gacgaatacc gcaaccaaag
     2821 ccgtattaaa gaagacggca gcgtcgtcat cagcgatacg cgcgtgaaag ccatcgaaag
     2881 catcctgcct tattaccacg gtgtttacgg cgatgatccc gcgctgcaaa ccacccgcga
     2941 acactttgca atgaaaaaca acacattgcc aagccaagaa gcgcgtgaaa aactgttcga
     3001 cttcttcttc tggacttctt ggtctgcttc gaccaaccgt cctgacgaga cgttcactta
     3061 taccaacaac tggccgcacg agcctttgat caacaacgta ccgaccactg aaaactatat
     3121 gtggtcattc accagcgttg ttcttctgct gatgggcatc ggtttgttga tgtggggtta
     3181 ttccttcctg accaaacacg aggaagtgga agtgccgtct gaagacccga tttccaaaat
     3241 ccaactgacc ccttcacaaa aagcattggg caaatacgtc ttcctgacgg ttgccctgtt
     3301 tgtggtacaa gtattgctgg gcggtctgac cgcgcactac accgtcgaag gtcagggttt
     3361 ctacggcatt gacgaggcgt tgggctttga aatgtccgac tggttccctt acgccctgac
     3421 ccgtacttgg cacatccaat ccgccatctt ctggattgca accggctttt tgacggcagg
     3481 tttgttcctt gcgccgattg tcaacggcgg caaagatccc aagttccaac gtgcaggcgt
     3541 gaacttcctc tatatcgccc tcttcatcgt ggtcggcggc tcttacgcgg gcaacttctt
     3601 cgcgttgacg cacatccttc ccccggaatt taacttctgg ttcggacacc aaggttacga
     3661 atacctcgat ttgggacgtt tctggcaact cctgctgatg gtcggcctgc tgttgtggct
     3721 gttcctgatg ttgcgttgca cggtttccgc cttcaaagaa aaaggcgtgg acaaaaacct
     3781 gctggcaatc tttgtcgctt ctatggtcgg tgtgggcgta ttctacgcac cgggactgtt
     3841 ctatggcgag aaatccccga ttgccgtaat ggaatactgg cgttggtggg tggttcacct
     3901 gtgggtggaa ggcttctttg aagtatttgc cactgccgct tttgcctttg tcttctacaa
     3961 tatgggcttt gtccgccgca gtaccgccac agcttctact ctggccgctg ccgccatctt
     4021 tatgttgggc ggcgttccgg gtacgctgca ccacctgtac ttctccggct ctacctccgc
     4081 ctctatggca atcggtgcct gcttctccgc tttggaagtc gtgccgctgg tgttgctggg
     4141 ccgtgaagca tacgagcatt ggtcttacca acacctgtcc gactgggcga aacgcctgcg
     4201 ttggccgctg atgtgcttcg tggcagtcgc cttttggaat atgatcggtg ccggtgtatt
     4261 cggtttcctg attaacccgc cgatttccct gttctatatc caaggtttga atacttctgc
     4321 tgttcatgcg cacgccgcct tgttcggtgt gtacggtttc ttggcattgg gcttcgtatt
     4381 gctggttgcc cgttatttga aaccgaacgc gcagtttgac gacaaactga tgacttgggg
     4441 cttctggctg ctcaacggcg gcttggtcgg tatgattgcc atcagcctgt tgccggttgg
     4501 cgtgattcag gcatacgcct ccatcacgca cggcctgtgg tatgcacgca gcgaagagtt
     4561 cctgcaaatg gaaatcctcg acaccttgcg ttgggtacgt acggcagctg acttggtctt
     4621 tatcggcggt gcaatctgcg ttgccatcca agccactaaa atcgtattcg gccgcgacaa
     4681 ataagttttg cggtatgaaa tgagcaactg cacccgtttt cgggtgcagt tttttattgc
     4741 ggattgggac gggaatggaa aaggatgtgg attttttatt ttaatcggct atacaattgc
     4801 tgctttcatg ccgtctgaag cacgtttcag atggcatcgg tttacatcag ataaggataa
     4861 aaatgggtat ttacgatttt caaatgaaag atgcggaagg caatgcggtt gatttgtcag
     4921 gctatcgcgg caaggttctg ctgattgtca acacggcaac gcgttgcggt ctgaccccgc
     4981 aatacgaggc tttgcagaag ctgtatgcac aatataccgc agaaggcttg gagattttgg
     5041 attttccgtg caaccagttc cgcgaacagg ctcccgaaag cagcggagaa attgcccaag
     5101 tgtgtatgat gaagtttggc acgaagttta agattttcga caaaatcgaa gtcaatggag
     5161 caaataccgc gcccttgtat gcctacctga aatccgtcaa accgcaagat aaaggcaatc
     5221 atctgtttaa agatttcgtg ttgaagctcg cagctttggg agagaagcgc gacgaaggcg
     5281 acatcaaatg gaactttacc aaattcctcg tcaaccgcga cggcgaagtg gtcgagcgtt
     5341 ttgcgcctag tgttacgccc gaagaaatcg aagccgatat tcgggcattg ctgtaatctg
     5401 ccgccgtctt gggaaatgcc gtctgaaggc ttcagacggc atttgtccgt ttgcgggttt
     5461 attccgaaat atcggcaaca ccgctttcgg ggaagatggg caaatccggc ggtgggagca
     5521 gggtatccaa agtcagggcg gacgcatcga gtgtggggta gccttcaaac gcgaccgaat
     5581 aaccgctgtt tccgttcata cggattcggg cgtgcgcgcc cagagggaaa gtgattttgt
     5641 cggcaatgtg cccgaaggga aagcccgtca gcacggggat tttcgccgtg cgcgaaacat
     5701 ggttggcaac ggcggaaaaa tcataagacg gatcatagac atctcgaatt ttttccatac
     5761 ggaaattgcc gaacacgatg gcgcgctgtt tcttcaaaat acccgaaaga tacagcgtat
     5821 tgagcatacg ttcgatgcgg tagggctgtt cgccgacatc ttcgaggaac aaaatgccgc
     5881 cgtcgatgtc gggcatataa ggcgtgccgg cgagcgaggc gaggacgctt aagttgccgc
     5941 cccacaatat gccttcggtt tcgacatcgg cgcgttggat ataaggaaca tcaacggtca
     6001 ggcggttttg ggttgcaccc ttgataaagg catccatcgt aaacgcaccg ggggcgggtt
     6061 tgccaaaatc gctataagcc atcgggccgg caaaactcat catattgcct tttgccaaca
     6121 atgccagctg gacggcgcat acgtcgctga atccgaaaaa cagcgtgccg tgttcgcgca
     6181 tccttgcgcc gagcgaagca aaatcgatat gcggcagaat ccgcgccgca ccgtaaccgc
     6241 cgcgcaagcc catcagcact ttaggcgtgg cgacgcggcc ggaagcgacc tcttggaaat
     6301 cggcgacacg ttgtgcgtcc gtaccagcaa accgttggaa gcggcggctg cccgcctgtt
     6361 ggttggttac ggtaaaaccg gcattgtaaa ggcgggttaa ggctgtgttg acgcggttgg
     6421 tgtcttcggc aaagcctgac gaagcgacaa cgcgcagaag gttgccgtcc gaactttgac
     6481 ggcgtggcgt ttggagaggc acggttcggg ctttcacaac agaatgggaa gagggaaggg
     6541 gcggaacgga tgtggcggat gtgccgcaag cctgaagcag tcccgcgccg gcggcggcgg
     6601 tgcaggtttt cagaaaacga cggcgggagg tcggttcggt cataatttcc ctttcatacg
     6661 gtttcagacg gcatcggcgg gcttaaagca gctttttaag ctgttccgtc caatcttgcg
     6721 gcagggtcat accgtgtttt cggacggggt ttgcccaaat cggcgcaggg aaggacgcat
     6781 cgttttcaaa gcgggcgata atatgccaat gcaggtgcgg cacgacattg cccaagctgg
     6841 cgaggttaat cttggcaggt tgaaacactt ggcgcatagc ggcttcgact ttgtacacca
     6901 tttccatcaa ttcgccgcgt tccgctgccg aaaggtcggt catttcggca atatgcttac
     6961 gccaaatgac gcggcagaat gcaggcgaac cgctgtcgtt atggacggcg atgacgcgca
     7021 gcttgggggt ttgcagcaaa atatcttcat cttgtgccgt gcagatgggg cagggttggg
     7081 cggtcatttt tccttattcc tgaaagtgtt taaaaaacgg tagggtaatt tttaatattt
     7141 caatctgtct gtccgcattg ccgttaattg taccacttca tagggcggtg ctctatgtgt
     7201 cgtcctgtgt gttgaaacat atcggacgcg tttgaacagt tgtgcggcaa actgttttag
     7261 cggcaggcaa gagatgccgt ctgaagccca ttgtccgtca ttcccacaca ggcagttgct
     7321 acggttgctg aagcccctta gccgtcgcgc aggcggttgc tacggttact aaaatcccgt
     7381 cattcccgcg caggcgggaa tccagtccgt tcggtttcag ttgtttctga taaatcttgc
     7441 agcgttgggt ttttagattc ccgctttcgc gggaatgac
//
LOCUS       DAXHKG010000098         7362 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.098, whole genome shotgun sequence.
ACCESSION   DAXHKG010000098 DAXHKG010000000
VERSION     DAXHKG010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7362
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.098"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            46..990
                     /gene="tehA"
                     /locus_tag="ACFMWP_001568"
     CDS             46..990
                     /gene="tehA"
                     /locus_tag="ACFMWP_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HFC5892146.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAAASVVWLLLVAAYLIKMFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GVLSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRG"
     gene            complement(1064..1747)
                     /locus_tag="ACFMWP_001569"
     CDS             complement(1064..1747)
                     /locus_tag="ACFMWP_001569"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HFC5892147.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVLEKFYL"
     gene            2044..4347
                     /gene="parC"
                     /locus_tag="ACFMWP_001570"
     CDS             2044..4347
                     /gene="parC"
                     /locus_tag="ACFMWP_001570"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HFC5892148.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSSK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKTDLMAVFRLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEIQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTTFKEGDRLKQTLEGRTV
                     LPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTVDSGETVLPPVAVYASSLINPDCKIIAATNQNR
                     ALAFPIGELKIMAKGKGLQIIGLNTGESMTHTAVSSEAEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGRLLPISGSLKQLSSPK"
     gene            4368..5944
                     /locus_tag="ACFMWP_001571"
                     /pseudo
     CDS             4368..5944
                     /locus_tag="ACFMWP_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237220.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
     gene            5937..6404
                     /locus_tag="ACFMWP_001572"
     CDS             5937..6404
                     /locus_tag="ACFMWP_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HFC5892149.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNVDQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            6508..7260
                     /locus_tag="ACFMWP_001573"
     CDS             6508..7260
                     /locus_tag="ACFMWP_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC5892150.1"
                     /translation="MTDILIDNTATETVRTLIQAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         1672 a         2214 c         1912 g         1564 t
ORIGIN      
        1 cactatatct gtgcgttacg acggcatgcc gtctgaaggg tgtttatgtc tgcatctaag
       61 aaatttccga ttcctttgag ctatttcagc atcgcgctgg gcttgtttgc cttggggctg
      121 tcgtggcgtt acggcgcgtc tgtcgggctg ctccccgcct tggccgccga atcgctgctt
      181 gcggcggctt cggttgtctg gctcttgctg gtggcggcat acctgatcaa aatgtttgcg
      241 taccgaaacg attttttgtc tgatttgcgc gacttggtgc aatgctgctt catcagcgcg
      301 attccgatta ccgctatgct ggagggactc gcgctgaagc cctatcaggc aggcgcggcg
      361 gcagtcctga tttatgtcgg cgttgccgga cagttggcgt tttcgatgta tcgggcggcc
      421 ggtctgtggc gcggcctgca ttccttggag gcgacgacgc cgattattta tctgcctacg
      481 gttgcgacaa actttgtcag cgcgtcatct ctggcggcgt tggggcatca tgattatgca
      541 gctttgtttt tcggcgcggg tatgttttcc tggctgagct tggaagcctc catcttgggc
      601 aggctgcgca cggcggcacc ggtcggcacg gcggcgcgtg gcgtggtcgg catccagctt
      661 gcgcccgcct ttgtcggctg cggcgcgtat tttgccgtcg gcggtaaagt cgacggtttt
      721 gcgttggcat taatcggcta cggctgcctg cagcttttgt tcttgctacg cctgacccgc
      781 tggttttggg aaggtggttt tacgatgagc ttttggggat tttcattcgg tttcgcggca
      841 atggcaggat gcggtctgca tctggcggct tctggcgtat tgtcgggctt ggggctgacg
      901 cttgccaccg ccggatcggc aggcgtggcg ctgctgcttg tcggtacgct gcaccggata
      961 gcgacggggc gtttcttggt acgcggctga tgcgttttgc cgccttgtca aaaatgccgt
     1021 ctgaacgctc aagccttcag acggcatttt ttatttcaca cccttacagg tagaattttt
     1081 cgaggacttt caaattgtcg tccaatttgt acaccaacgg ctgaccggtc gggatttcca
     1141 agcccatgat gtctttgtcg gaaatgccct cgatgtgttt tgccagcgcg cgcagggagt
     1201 tgccgtgcgc cgccaccaag acgcgtttgc cgctcaaaat cgcgggggcg atttggtctt
     1261 cccaaaacgg caatacgcgc tccagcgtta ctttcaggtt ttcgccgtcg ggtacgacat
     1321 cggcaggcag atgggcatag cggcggtctt tgtgtgcgga aaactcatcg tctttgtcca
     1381 aaagcggcgg cagggtgtcg tagctgcgcc gccagatgcg gacttgctcg tcgccgtatt
     1441 gttcggcggt ttgttttttg tccaggcctt gcagttggcc gtagtggcgt tcgttcagcc
     1501 gccatgtttt gatttgcggt acgaacagtt ggtcggattc ttccaaaacg atgttgcagg
     1561 tcttaatcgc gcgggtcagg acggatgtga aggcgatgtc gaactcatag ccgttttctt
     1621 tcagtttttt accggcggcg gcagcctcgg caagcccctg ctcgctcagc ttcacgtcgc
     1681 gccagcctgt aaacaggttt ttcgcgttcc attcgctttg tccgtggcgg ataaatacca
     1741 gttccatatc gtctccaatg tgtgaaagtg ggaaagcctt atttataaca tattttcaca
     1801 tttcccgtat ttgattcaga ttcagacacg cgcccactat ggtttgccgt tttgatttac
     1861 aataatgtcc tttgttttac attccgcata cacaatgttt caacacacag gacgacacat
     1921 aaagcaccgc cctatgtgtt gccctgattt ggaaggggtt gccccctccc aaataaagtc
     1981 tgattctacc gccccgaagg acagatgtcc aagtggcggg gtttcaaccg aaaaggaaat
     2041 acgataaata tgcaaccgca cgctccacat accgattcca atacgctgat gctcggccga
     2101 tacgccgaac gcgcctatct cgaatacgcc atgagcgtgg tcaaaggccg cgcgctgcct
     2161 gaagtttcag acggccaaaa gcccgttcag cggcgcattt tgtttgcgat gcgcgatatg
     2221 ggtttgacgg cgggggcgaa gccggtgaaa tcggcacgcg tggtcggtga gattttgggt
     2281 aaataccatc cgcacggcga cagttccgcc tatgaggcga tggtgcggat ggcgcaggat
     2341 tttaccttgc gctatccctt aatcgacggc atcggcaact tcggttcgcg cgacggcgac
     2401 ggtgcggcgg cgatgcgtta caccgaagcg cggctcacgc cgattgcgga attgctgttg
     2461 tccgaaatca atcagggaac ggtggatttc gtgccgaact acgacggcgc gtttgacgag
     2521 ccgctgcacc tgcccgcccg cctgcctatg gtcttgctca acggcgcgtc aggcatcgcg
     2581 gtgggcatgg cgaccgagat tccgtcgcac aatttgaacg aagtgacgca ggcggcgatt
     2641 gcgctgttga aaaagccgac gctggaaacc gccgacctga tgcaatatat tcctgcgccc
     2701 gattttgccg gcggcggtca aatcatcacg ccggcggacg aattgcgccg gatttatgaa
     2761 accggcaagg gcagcgtgcg cgtgcgtgcg cgttatgaaa tcgaaaaatt ggcgcgcgga
     2821 caatggcgcg tcatcgtaac cgagctaccg ccgaacgcca attcctccaa aatccttgcc
     2881 gaaatcgaag agcagaccaa cccgaaaccg aaagcaggca agaagcagct caaccaagac
     2941 cagctcaata ccaaaaagct gatgctggat ttaatcgacc gcgtgcgcga cgagtccgac
     3001 ggcgaacatc ccgtacgact ggtgttcgaa ccgaaatcca gccgcatcga taccgatacc
     3061 ttcatcaaca cgctgatggc gcaaacttcg ctggaaggca atgtgtccat gaacttggtg
     3121 atgatgggtt tggacaaccg ccccgcgcag aaaaacctga aaacgatttt gcaggaatgg
     3181 ctggatttcc gcgtcgttac cgtaacacgc cgtctgaaat tccgtttgaa ccaagtggaa
     3241 aaacggttgc acatcctcga aggccgtctg aaagtctttc tgcacatcga cgaagtgatt
     3301 aaagtcatcc gcgaatcaga cgacccgaaa accgatttga tggcggtgtt caggctgacc
     3361 gaaatccaag ccgaagacat tttggaaatc cgcctgcgcc agttggcgcg tttggaaggt
     3421 ttcaaactcg aaaaagaatt gaacgaattg cgcgaggaac aaggccgtct gaacatcctt
     3481 ttgggcgacg aaaacgaaaa acgcaagctg attatcaaag aaatacaggc ggatatgaaa
     3541 caatacggcg acgcgcgacg cacgctggtg gaagaagccg gacgcgccgt gttgacgcag
     3601 accactgccg acgaacccat cacgctgatt ctgtcggaaa aaggctggat acgcagccgc
     3661 gccggacaca accttgattt gagccaaacc acgttcaaag aaggtgaccg cctcaaacaa
     3721 acccttgaag gccgcaccgt tttacctgtc gtcatcttgg attcatcggg cagaacctac
     3781 acgctcgatg ccgccgaaat ccccggcggg cgcggcgacg gcgtaccggt ttcatcctta
     3841 atcgagctgc aaaacggcgc gaaacccgtt gcgatgttga caggattgcc ggaacaacat
     3901 tatttattat caagcagcgg cggctacggc ttcatcgcca aactgggcga tatggtcggg
     3961 cgcgtgaaag cgggcaaagt agtgatgact gtggatagcg gcgaaaccgt cctgccgccg
     4021 gttgccgtct atgcttcttc gctgatcaac cccgactgca aaatcattgc cgccaccaat
     4081 caaaaccgcg ccctcgcctt ccccatcggc gaattgaaaa ttatggcgaa aggcaaagga
     4141 ctgcaaatca tcggattaaa caccggtgaa tcgatgacgc ataccgccgt ttcttccgag
     4201 gcagaaatcc tgattgaaag cgaaggcagg cgcggcgcag cgcacaaaga ccgcatcccc
     4261 gtctccctgc ttgaggcaaa acgcggcaaa aaaggcagac tattacccat atcgggcagc
     4321 ctgaaacagc tttcttcccc caaataaacc cgattccaca cataattatg gtgatttcca
     4381 acccccgcga acttgaaaaa ctcaaagacc ggattcccaa tctgatcaac atcgcccgca
     4441 tcgccatcgt cctccccctg ctgattatgc atatcttcgg gttggaggtc agcgggcatg
     4501 aaaacctgta cgcctcatgg acgacatggg cattttactt gtggctcgcc atttcctgct
     4561 ggatgatttt cttttccatc atccatccgc attggcaatg gcagtcgctg aaaatgccgc
     4621 gtttcagcgc ggtggcggac atcacgatga tcggcgtgct gacctacctg ttcggcggca
     4681 tcgactcggg gttcggcatc ctgatcctgc ccttcgtggg cagctcctgc ctgctcagtt
     4741 acgggcgtta ccccctgctc tatgccagct acgccgccat cctgctgata ttcaacgcca
     4801 ttgccgacgg cgatatcggc aaatatccgc acatatcgga tgcccgaacc gcctcggcaa
     4861 ccttcatcct cgtcgccgcc tcctatcttt ccgccatctt cacctcactg tcggtcaaat
     4921 acatcgacag cgccggccaa ctggcccgcg acaaccacct cgcctaccgg cgcatcaaag
     4981 gcttgagcca aaccgtactc gaacgcgttc aagaagccgt cgtcgtcatc aacgtcgagc
     5041 atcagaccat actgttcaat aaaaaggcaa aagacctgct acccatgctt gaaatcggac
     5101 agcatactgt cctgttcgac cctattaccg ttttatggga caaggcctct tcgcgtactt
     5161 tcgaacgcaa tatcgacacg cccgccctga ccgcccgcat ccgcgccgtg ccgatgaaca
     5221 aagagcagaa caagctgctc atcctctaca tccgcccgca aagcgaaatt caggcagaag
     5281 ccctgtccgt caaacttgcc gcactcggac aactgaccgc caacctcgcc cacgaaatcc
     5341 gcaacccgat gtccgccatc cgccatgcaa acgacctgtt gcgcgaaaat atggaagcgg
     5401 gggcggcaga tccgttcaac gccaaattgt gcaaaatcat cgacggcaac gtctgccgta
     5461 tcgacaaaat gctcgaagac atttcctcgc tcaacaagcg caacaaaacc gaacgcgaaa
     5521 ccatcggcct gataccgttt tgggcggaat tcaaacaaga gttcctgctc ggccatcccg
     5581 atgccgccgg ctgcatccgt ccggacattc agggcggcag cctgaccgcc tatttcgatc
     5641 ccgcccacct gcggcaaatt atgtggaacc tcgccaacaa cgcgtggcgg cacagccgca
     5701 aacagcccgg ctcgatttcc gtcaccatcc gccccgcgca aaaaaacacc gtctgcatcc
     5761 tctttgccga ccgcccgaag tgcaggaaca cctgttcgaa cccttttaca ccacggcgga
     5821 aaacggcacc ggcctcgggc tgtatgtcgc ccgcgaactg gcacacgcca acttcggcga
     5881 tttgacctac ctgccggaag ccaaatgttt caaactcaca ttaccggaaa aaagcaatga
     5941 ctgaactgca acatcccgtc ctcgtcgttg atgacgaaac cgatattctc gacctgatgg
     6001 aaatgaccct gatgaaaatg ggcttgcgcg tccataccgc gtcaggcgtt gccgaagcaa
     6061 aaaacaagct cgacagccaa cgctattcgc tcgtcctgac cgatatgcgt atgccggacg
     6121 gctcggggct agaagtcgtc caacacatca acagccgcct gctcgatacg ccggttgctg
     6181 tcatcaccgc cttcggcaat gtcgatcagg cacaggaagc cctgcgttgc ggcgcgttcg
     6241 accccgatac catgcagata caggactatc tcgaccaaat cgaacgcgac atcatcgaac
     6301 aaaccctcaa acaaaccgaa ggcaaccgca cgcaggccgc caaacgcttg ggcatcagct
     6361 tccgttcgat gcgctaccgt atggaacgcc tcaacatcgg ctgacgacaa aacggcatcc
     6421 gcaccatctc cgcccacccg aaaaaatgcc gtctgaaacg gcacggcaaa gcgggttcgc
     6481 cccacgcccg aacggacaca aaacaccatg accgacatcc tcattgacaa caccgccacc
     6541 gaaaccgtcc gcaccctgat acaggcattc ccccttgtgc ccgtttccca accgcccgaa
     6601 caaggcagtt acctccttgc tgaacacgat accgtcagcc tcaggcttgt cggggaaaaa
     6661 agcagcgtca tcgtcgattt tgcctccggc gcggcacaat accggcgcac aaaaggcggg
     6721 ggcgaactca tcgccaaagc cgtcaaccac accgcgcacc ccaccgtttg ggacgcaacc
     6781 gcaggattgg ggcgcgacag cttcgtcctc gcctcgctcg ggctggccgt taccgccttc
     6841 gagcaacatc ccgccgtcgc ctgcctgctt tcagacggca tccgccgcgc cctcctcaat
     6901 cccgaaacgc aagacaccgc cgcgcgcatc accctgcatt tcggcaacgc cgcagtacaa
     6961 atgcccgcac ttgttcaaac acaaggcaaa cccgacatcg tctatctcga ccccatgtat
     7021 cccgaacgcc gcaaaagtgc cgccgttaaa aaagaaatga cctacttcca ccggctcgtc
     7081 ggcgaagcgc aagatgaagc ggcactcctg cataccgcac gccaaacagc aaaaaaacgc
     7141 gtcgtcgtca aacgcccccg cctcggcgaa caccttgccg gacaagcccc tgcctaccaa
     7201 tacaccggca aaagcacccg cttcgacgtt tacctgccct acgggacgga caagggataa
     7261 cgcccataaa acaagacacc gaaaaatttg ccgttcttat gcaaacgaga aaccggtttt
     7321 tgcgtttcga ctgttttgga taaatcatca caccttaaag tt
//
LOCUS       DAXHKG010000099         7351 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.099, whole genome shotgun sequence.
ACCESSION   DAXHKG010000099 DAXHKG010000000
VERSION     DAXHKG010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.099"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            217..429
                     /locus_tag="ACFMWP_001574"
     CDS             217..429
                     /locus_tag="ACFMWP_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HFC5892151.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            complement(408..569)
                     /locus_tag="ACFMWP_001575"
     CDS             complement(408..569)
                     /locus_tag="ACFMWP_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892152.1"
                     /translation="MSEGTIARKFNQFILPVQLNQMPSEGAERTSDGIGEARRLQTAF
                     LPLYFNAAS"
     gene            577..2160
                     /locus_tag="ACFMWP_001576"
     CDS             577..2160
                     /locus_tag="ACFMWP_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HFC5892153.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     KHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLGGGGKLPAIQKILNHNTYYVAHEYMEIFNDPIYVNGFIEWANRHRLAYIGDTDLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEAFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYVAAFVEHGAEAFVQ
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2242..3339
                     /locus_tag="ACFMWP_001577"
     CDS             2242..3339
                     /locus_tag="ACFMWP_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFC5892154.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEGLFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3453..4568
                     /locus_tag="ACFMWP_001578"
     CDS             3453..4568
                     /locus_tag="ACFMWP_001578"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HFC5892155.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4693..5148
                     /locus_tag="ACFMWP_001579"
     CDS             4693..5148
                     /locus_tag="ACFMWP_001579"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HFC5892156.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5219..5695
                     /locus_tag="ACFMWP_001580"
     CDS             5219..5695
                     /locus_tag="ACFMWP_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HFC5892157.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5683..6609
                     /locus_tag="ACFMWP_001581"
     CDS             5683..6609
                     /locus_tag="ACFMWP_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC5892158.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6674..7231
                     /locus_tag="ACFMWP_001582"
     CDS             6674..7231
                     /locus_tag="ACFMWP_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC5892159.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTADPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATHGLYQNVPVQPVKIRRIVVGQ"
BASE COUNT         1932 a         1804 c         1907 g         1708 t
ORIGIN      
        1 tgttaatcca ctataaatgc gccgattgcc aaggcgatga tgctcaacca gggtttttgt
       61 gaagcgttca ttgttgtcgt cctgatggga attgccgcca ttatgcgcaa gcgtccgtct
      121 ttttccaaac cgccgtaccg tttccgcgtt tgcccaagtt cacgccccga cttacaataa
      181 cgcccgtcag attgcagttc caacgaaagg aaaatgatgg aaacccttat cctcgacatc
      241 ggcggcatga gctgcggcgg ctgcgtcaaa agcgttaccc ggatattgga aggcgtaaaa
      301 ggcgtggcaa gcgtcgaagt cagccttgaa aacaaaagtg cgaccgtcgg atacgacccc
      361 gcgcaaaccg atgcaggggc gttgattgaa gccgttgaag acggcggcta tgatgccgcg
      421 ttgaaataaa gcggcaaaaa tgccgtctga agccttcgcg cctccccgat gccgtctgaa
      481 gtacgctccg cgccttcaga tggcatttga tttagttgaa cgggtaggat gaattggtta
      541 aacttgcggg caatagtgcc ttcagacaaa caaaatatgc cgaacaaaaa gaaaaaagcc
      601 gcctttgcgc gtgctgcaac ggagaacggt gtgccggacg tgtccaacat caaaaattca
      661 tatgatgatt tgatgtatga atccaaagca ttttcccaaa ccgccatcaa cgccttggag
      721 gctcgcgccc gcatgatggg tttgcagccc gcgcccgccg ccaatgccaa ggtcttggag
      781 ctgggctgtt cgatgggcgg caacatcatc acgcaggctc tttattaccc ggatgcggaa
      841 tttgtcggta tcgacttgtc cggcaggcag gttgcgcagg gcaacgccat cattgaaaaa
      901 atgggcttga aaaatgtgcg tctggaagaa aaagatattt tgaccgtcga tgagtcattc
      961 gggaagttcg actatatcat cgtccacggc atttggtcgt gggtgcctga cgcagttaaa
     1021 gacaaaatct tttcgatttg ccggaacaac ctgaccaaac acggcattgc ctatatttca
     1081 tacaatgttt accctggctg gaaacggcag gagcagttgc gcgaaattat gtactttgcc
     1141 ggcagggatg tgcttgaaga acccttggaa gcgcggacgc ggaaaggctt ggacgcgctc
     1201 aaggcgctgg cggaaatttt ggaaaacgac aaaggcttgg gcggcggcgg caaacttccg
     1261 gcgattcaaa aaatattgaa tcacaatact tattatgtcg cacacgaata tatggaaata
     1321 ttcaacgacc cgatttacgt taacggcttc atcgaatggg caaaccgcca ccggctggcg
     1381 tatatcgggg ataccgattt gcacgcgtct tttgtttctt ggatggcgga gcatacgcgg
     1441 gagcggattc tggcattggc agggggcgat tatattgcca aagaatttta cagcgatatt
     1501 ttatccgacc gccaattccg ccgttcgctt ttatgccgtg aggaagtcgg ggatactgtc
     1561 aggcgtgacg agtcggttgc cgtcgaagtg atagaaagtt tgaatttccg cccggcaaga
     1621 ggggaaacaa tcaactttga tgaaaacgat accctgcttt cgggcatacg cgatgtgatg
     1681 aaaaccggag aggcgtttaa aacggaagat gttgcggaaa atctcgcccg ccgatttccc
     1741 ggtttgacat tcgaccgtat gaaaatcaat tcccagcttt tattgcaaac cattctcggg
     1801 cgtttttctg tttcatcaga caatgcgggc aaacaatttt ttgaagacca taaaacctat
     1861 gtgccggcgc gttttacaga ttatgtcgcc gcctttgtgg aacacggcgc ggaagcgttt
     1921 gtccagcctg ccaaccgtta caacgaaagc accccctcat tcgggtacgg gcatttgtac
     1981 attatgcggc aattgtcgcg gccgacgagc aaacaggcat tgattgaaac ggttgccgaa
     2041 aacttgaaca tcgtcagcac cacgcccgac ggtttgacat tccatccgcc tgccgaagtg
     2101 tatgtggaag aaatattggc agacttggca gacaggcatt ttctcgtttc ggcggattga
     2161 cgggcaagtc ccgacggcaa tccgtccgat atattttcaa acaggaaaaa cacacactgc
     2221 gaaaagcggt acacgacata tatgaaccag acatttacct tgcccgatac gcgcccgtat
     2281 ccccaaaatc cgattaaaaa ccacctgctg ctcaatgcct accagttggc gcataattct
     2341 tcccaggctt cgcgcaaact ctcgtccggc caacttcaaa ccgaaatcag ggggatgctt
     2401 gagcaaaacc actatatcaa cctttccctc gcgctgacga tgtcgcccga tgccggaact
     2461 tatgccgcgc tgctttccag tgtgaacgcg gtactcgatt gcgagaaaga aggcgaagtg
     2521 cagtggttcg ccctgccggt cgtgctggtg tccggctgca agaaagaacg ggcaatcgag
     2581 atgaagctgc cgacggaggg attgtttgcc tgtttgcaaa actatccgca cctgcgcgcg
     2641 ttgacgcaag agacgcaatg gctgccttat cttgtacatt cctccgattt gagtgcggtc
     2701 gcgccggatg agtggtggcg tgccaaacaa aataccgaag cggcggcgca acacttacgc
     2761 cgtttcgccc cgcgcccttt gcttttgccc gaagggcagt ccgtccacgt cgtttacgcg
     2821 ctgggtttcg gcagcggcaa agttcagacg gcattgggtc agaaccttct tcaggcaggt
     2881 ctgcccttga tgcaggtatg gcaggaaaat cttgcatcgg aaggcgttac gctgtttgcc
     2941 aatccgcttt ccccggattc tccggtacgc gcgctttccg acggcagcca cacgcgccag
     3001 cgcatggcga tggatgtgtt tgcggcaaac gcgatacgcg ccgtccgtat gcagagtccg
     3061 cgcgtcggcg tggtcgcagc ggcaaaggcg ggcggacaga ttttattcgg gtttaatgcg
     3121 accgacggcg cgtttgaagt cgtgccgcag gtgttttcgt ggcagctttc ctttaccgac
     3181 aatattggcg ttattcagca aaattttttg gatttaatgg cagaatgccg tgtagaacac
     3241 gtttacctgt tgcacaatcc cttgggcgaa caggaaagca tcccgagcta tgcggaagca
     3301 ttgaaacggg aagggcacaa tccgtttttc agcgcatagt gatttgtagt agtgataggc
     3361 tttctcattt ctataataaa tcaaaataaa gagcacaaca ctttttcatt ctgtgttgtg
     3421 ccttgagtga aacgaaagga tgaattataa atatgaagat tgtaattgca ccggattcgt
     3481 ttaaggaaag cttgacagct caacaggtag ctgaagcaat aaaaagaggc ttccaacaat
     3541 cgatagcaga tgtggaatgt ctcctctgtc ctgtcggtga tgggggagaa ggcactgtag
     3601 atgctatccg acattctctt gacctagaag aaaaatgtct ccaagtgaca ggaccttttg
     3661 gacaaaaaga agtcatgcgc tattttcaaa aagaacaact agccctattc gaagttgctg
     3721 atttggttgg tcttggaaaa atcccgctag agaaacgaaa tccattacaa atccaaactc
     3781 gtggtattgg agaattgatt cgccacctca ttagtcaaga aattaaagaa atctatattg
     3841 gcgttggcgg tacggccagt aatgatggag gtattgggat tgctgctggt ttaggttatc
     3901 aattttatga tgaggatgga aatgccttac ccgcttgcgg tcaatcctta ctaaacctag
     3961 cttctgtttc aacagaaaat cgctataaaa ttcctgaaga tgttcacatt cgtattttag
     4021 cagatgttgt gagtccctta tgtggacacc aaggtgcgac ctatacgttt ggcaagcaaa
     4081 aagggttgga ttctactatg tttgaggccg tagatcaggc aatacaagat ttttatgaaa
     4141 aagtctcccc tgcaacatta aaacttaaag gagcaggagc tggtggaggc atcgctggtg
     4201 gtttgtgcgc ctttgctcag gcaagtatcg tatctggaat tgacacctgc ctggacttga
     4261 ttgactttga taagaaagtg tcagatgttg acttggttat cgttggtgaa ggaagactag
     4321 atcgtcaaag tttagcaggg aaagcgccta ttggtgtagc aaaaagaacc cctgtcggag
     4381 ttcctgttgt cgctatttgt ggcagtctcg ttgaagattt gccttccctg ccatttgaaa
     4441 atatccaagc tgccttttct attttggaga aaagtgaacc tttagaagat agtttgaaaa
     4501 atgccagtct ctatttggag catacggctt ctaatattgg acacttatta aatatgccta
     4561 agatttagcc aaaccatttc ttccagatgg atgttttggc tggttctgcc ttatgcggtt
     4621 acgattaacc gaccgatgac gtctgaaagg gtttccgctt cagacggcat cgcgccggaa
     4681 cagggagggg atatgaaaaa accgaaaatc ctttttgtct gcctcggcaa catctgccgt
     4741 tcgccgatgg cggaatacat tttgcgccgc cgcgccgccg aagcgggcat tccccttgaa
     4801 gcggacagcg cggggacatc gggctggcac gacggcgaag atatgcaccg cgagacggca
     4861 aagatattga aaaaacacgg tatcgatgct tcaggcttta ccagccgcaa aatccgccaa
     4921 agcgatgcgg cggcgtttga ctgcatcatc gcgatggacg gcaagaattt gtccgaattg
     4981 gaaagaacct tcggcaggcg gccggaaaaa atattcaagc tgaccgacct gatacccgaa
     5041 agcggttacg accatgtccc cgatccgtgg tatacgggcg attttgaaga aaccttcagg
     5101 cttgcggatg cgggctgtcg ggcattgttg gaaaagattt ccaaataaag caattgaata
     5161 caaatataaa accgcctcct gccgtatcgg ttgttcagac ggcataaaca gagaatttat
     5221 gaaaacaaat ttcaaacaga aaattatcga acaggcacgc agcgaaggct tgcaggtaac
     5281 cgctttgcgc gagcaggtat tagatattgt cttgcagcaa agcggcgtga ttaaagccta
     5341 caacgtcttg tcgcagatgc agcagcaaag cgagggcgtg cttgcaccgc ctaccgccta
     5401 ccgcgccctt gatttttggg cggagcaggg cgttttgcac aaagtggcgg cggtcaacgg
     5461 ctatattttg tgcagccacg cgcagcacga gtgcgacgac cattgccacg accacgaaga
     5521 agccgaagcg caccacagcg cgtttatttt ggtctgcacc gaatgcggca cggcggacga
     5581 gcaaaccctc agccacgagt gggcggcact gcgcgcaggc gttgccgaaa gcggctttgc
     5641 gctgaaagaa gaacacgttg ttttaactgg aatctgtaaa aaatgtcaga aatgaaaaaa
     5701 accaaagtcc acctgatttc aggttttctg ggaacaggca aaaccactgc gctcaaaagc
     5761 ctgatggcgc aaaaagaccc gaacgaaaaa tgggtcatca tcgtcaacga gttcggcgaa
     5821 atcggcattg acggcgcggt attgagcgac aacggtatcc ctgtggcaga aatcgccggc
     5881 ggctgtttgt gttgcaccgc cggcccgcaa atgggcgtaa ccgtgcagaa aatgctgcgc
     5941 gacgccaagc ccgaccgcct gatgattgaa gcaagcggac tggctcacgc agccagcgtc
     6001 atcgacgaac tcaaagccaa accgctggac agccttttgg aaatcggcgc cgtctttacc
     6061 gtcgtcaatc cgcgccagtt catcaacccc gattacgcgc aacaggcgtt gtataaagac
     6121 caaatcggca tctgcgacgt attggtcgcc agcaaaaccg atttatgcac ccccgaacag
     6181 cttgccgaat ttcacgacaa agcggcaaaa ctgttcccgc ccaaagccaa agtggttgaa
     6241 gtccaaaacg cacaactcga catccggtgg ctcgatattc ccgtcatcga aaaatcacgc
     6301 taccgcctca aagccctgcc ggataatacc atgggcttcc agtcgcaagg tttcacattc
     6361 cccgccggac gcgatttcga cggcgaaaag ctgaccaact ttttcaacga cctgcccaaa
     6421 atgaccgaag gactcgtccg cgccaaaggc gtgtttcaag tattgggaac gtgggtgtgg
     6481 ctcaactggg tagacggaca gtggggcgcg aaccaagtct catggcggcg cgattcgcgt
     6541 tttgaattga ttgccaaatc gtttgatgcg gatttaatcg aacaaaagct caaagacgca
     6601 ttggaatagc gttcacgcgc cttcagacgg catatgaaat gaaaatgccg tctgaaggtc
     6661 tgaggaggac gggatgaaac ccaaattcaa aaccgtttta accgcgctgc ttttggcggt
     6721 ttccctgccg tctatggcgg caacccatgt tttgatggaa accgatatgg gcaatatccg
     6781 tttggttttg gacgagtcca aagcccccaa aaccgttgct aatttcgtgc gctatgcccg
     6841 aaaaggcttt tacgacgaca ccgtttttca ccgcgttatc gacggtttcg ttatccaggg
     6901 cggcggattt accgaagact tggtacaaaa ggcaaccgat aaggccgttg ccaacgaatc
     6961 cggtaacggc ttgaaaaaca ctgccggtac catcgccatg gcgcggacgg ccgatccgga
     7021 ttccgccacc agccaattct ttatcaatct ggcggacaat gattcactca actacaaaaa
     7081 cggacaatac ggctataccg ttttcggcag ggtcgaaagc ggcatgaaca ccgtttccaa
     7141 aatcgcccgc gtcaaaaccg ccacgcacgg cctttatcaa aacgtacccg tacagcccgt
     7201 caaaatccgt cgcattgttg tcggacagta acacgcagac agatgttcag acggcgtcgc
     7261 ccgtttcaca aaaaacgccg tctgaagtga aaaaatattt taaaacagat agttgatatt
     7321 gacaaattca aaccgaggat tttaaaatgc t
//
LOCUS       DAXHKG010000100         7348 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.100, whole genome shotgun sequence.
ACCESSION   DAXHKG010000100 DAXHKG010000000
VERSION     DAXHKG010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.100"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            144..1154
                     /gene="dusB"
                     /locus_tag="ACFMWP_001583"
     CDS             144..1154
                     /gene="dusB"
                     /locus_tag="ACFMWP_001583"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HFC5892160.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFADEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNAQAGSALMQNEPLVAAILEAVVRAVDVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAAAVFKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGETAGV
                     RIARKHIGWYIGEMPDGEQARREINRLDSAAAQYDMLAGYLERLAGKTDRWACGYRTN
                     AF"
     gene            1184..1423
                     /locus_tag="ACFMWP_001584"
     CDS             1184..1423
                     /locus_tag="ACFMWP_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HFC5892161.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            1426..1962
                     /gene="ruvC"
                     /locus_tag="ACFMWP_001585"
     CDS             1426..1962
                     /gene="ruvC"
                     /locus_tag="ACFMWP_001585"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HFC5892162.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPPDAP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            2013..2882
                     /locus_tag="ACFMWP_001586"
     CDS             2013..2882
                     /locus_tag="ACFMWP_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HFC5892163.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWDGKKRETVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLHFYPAWESFPSEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            3381..3515
                     /locus_tag="ACFMWP_001587"
     CDS             3381..3515
                     /locus_tag="ACFMWP_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892164.1"
                     /translation="MPSERIFRSVLRLVGVSSETVKRKFAGVELSYAGKAAGESLYCL
                     "
     gene            3632..4426
                     /locus_tag="ACFMWP_001588"
     CDS             3632..4426
                     /locus_tag="ACFMWP_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HFC5892165.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSTQTEDKPHWSEFAQAWK"
     gene            4638..7241
                     /gene="pepN"
                     /locus_tag="ACFMWP_001589"
     CDS             4638..7241
                     /gene="pepN"
                     /locus_tag="ACFMWP_001589"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HFC5892166.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSTKLLSVKINGVAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDCFTTMGGRNVKIEFYTAEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAESRL
                     KNNIFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAAAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVFPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
BASE COUNT         1789 a         1959 c         1972 g         1628 t
ORIGIN      
        1 ccgcctgtga gtggcggggc agggaatctg tgtgcggatt atgccataaa acggtgtccg
       61 ccccaatcgc gggcgcgtcc ggagattgga aatcctgctt aaaaaatgta caatggcgca
      121 cttttttgaa acgcggatcc attatgcaca tcggcggcta ttttatcgac aaccccatcg
      181 cacttgcacc gatggcgggc attaccgaca aacccttccg ccgcctctgc cgcgatttcg
      241 gcgcgggttg ggcggtgtgc gaaatgctga ccagcgaccc gacacttaga aataccaaaa
      301 agaccctgca ccgcagcgat tttgccgatg aaggcggcat cgttgccgtg cagattgccg
      361 gcagcgatcc gcagcagatg gcggatgccg cgcgttacaa cgtcagcctt ggggcgcagg
      421 ttatcgacat caacatgggc tgtcccgcca agaaagtgtg caatgcccaa gccggcagcg
      481 cgctgatgca gaacgagccg ctggttgccg ccattctcga agccgtcgtc cgtgcggtgg
      541 acgtacccgt taccctcaaa acccgtttgg gctggcacga cgaccacaaa aacctgcctg
      601 ccgtcgcccg catcgccgaa gattgcggca ttgccgccct tgccgtccac ggacgcactc
      661 gcacgcaaat gtacaaaggt gaagcggctt acgacctgat tgccgaaacc aaatgccgtc
      721 tgaacatccc ggtctgggtc aacggcgaca tcacttcgcc gcaaaaagcc gccgccgtct
      781 tcaaacaaac cgccgccgac ggcatcatga tagggcgcgg cgcgcaaggc agaccgtggt
      841 tcttccgcga tttgaaacat tacgccgaac acggtgtttt accgcctgcc ttgagtttgg
      901 cagaatgcag tgccgccatt ttgaaccacg tccgcgccat gcacgcgttt tatggtgaga
      961 ccgccggtgt gcgcattgca cgcaaacaca taggctggta catcggcgaa atgcccgacg
     1021 gcgaacaggc gcggcgtgaa atcaaccgct tggacagtgc ggcggcgcaa tacgacatgc
     1081 ttgcaggtta tcttgaaaga cttgccggaa aaaccgaccg ttgggcgtgc ggctaccgca
     1141 caaatgcctt ctgaacactt gattatcctt tgaaagtgca atcatgcccc atacccttcc
     1201 cgatatttcc caatgtatca gacaaaattt ggaacaatat ttcaaagacc tgaacggtac
     1261 cgaaccttgc ggcgtgtacg atatggtatt gcatcaggtg gaaaagccgc tgctggtgtg
     1321 cgtgatggag caatgcggcg gcaaccagtc caaagcctcc gtcatgttgg gactgaaccg
     1381 caatactttg cgtaaaaaac tgattcaaca cggtttgctg tgaatatgtc ggcaaccgtc
     1441 cgtatcttag gtatcgaccc gggcagccgc gtaacgggtt tcggcatcat cgatgtcagg
     1501 gggcgcgatc atttttacgt cgcctccggc tgcatcaaaa cgcctcccga tgcgcctctg
     1561 gcagacagga ttgccgtgat tgtgcggcac atcggcgaag tcgttgccgt ttacaagccg
     1621 cagcaggcgg cggtggaaca ggtgttcgtc aacgtcaatc cggcatcgac gctgatgctg
     1681 ggtcaggcta ggggcgcggc attggcggca ttggtcagcc ataagctgcc cgtttcggaa
     1741 tacacggcct tgcaggtcaa acaggcggta gtcggcaaag gcaaggcggc gaaagaacag
     1801 gtgcagcata tggtggtgca gatgctgggg ctttcgggaa cgccgcaggc ggatgcggcg
     1861 gacggtcttg ccgtcgcgct gacccacgcc ttacgcaacc acgggcttgc cgccaaactc
     1921 aatccttcgg ggatgcaggt caagcgcggc aggtttcaat agtttcagac ggcatttgta
     1981 ttttgccgtc tgaaaagaaa atgtgtatcg agatgaaatt tatatttttt gtactgtatg
     2041 ttttgcagtt tctgccgttt gcgctgctgc acaaacttgc cgacctgacg ggtttgctcg
     2101 cctacctttt ggtcaaaccc cgccgccgta tcggcgaaat caatttggca aaatgctttc
     2161 ccgagtggga cggaaaaaag cgcgaaaccg tattgaagca gcatttcaaa catatggcga
     2221 aactgatgct tgaatacggc ttatattggt acgcgcctgc cgggcgtttg aaatcgctgg
     2281 tgcgttaccg caataagcat tatttggacg acgcgctggc ggcgggggaa aaagtcatca
     2341 ttctgtaccc gcacttcacc gcgttcgaga tggcggtgta cgcgcttaat caggatgtac
     2401 cgctgatcag tatgtattcc caccaaaaaa acaagatatt ggacgcacag attttgaaag
     2461 gccgcaaccg ctacgacaat gtcttcctta tcgggcgcac cgaagggctg cgcgccctcg
     2521 tcaaacagtt ccgcaaaagc agcgcgccgt ttctgtatct gcccgatcag gatttcggac
     2581 gcaacgattc ggtttttgtg gattttttcg gtattcagac ggcaacgatt accggcttga
     2641 gccgcattgc cgcgcttgca aatgcaaaag tgatacccgc catccccgtc cgcgaggcgg
     2701 acaatacggt tacattgcat ttctacccgg cttgggaatc ctttccgagt gaagatgcgc
     2761 aggccgacgc gcagcgcatg aaccgtttta tcgaggaacg cgtgcgcgaa catcccgagc
     2821 agtatttttg gctgcacaag cgtttcaaaa cccgtccgga aggcagcccc gatttttact
     2881 gactacgtaa aattacaaaa catatcaggc gtttcaagtc gaaattcctg attgtttttg
     2941 gaaatttgaa atccgggtcg tgcaaacagg atttgccgga cggttttaac ggttcagttg
     3001 tttgtaaaaa caatgctttt taagattgac aaaaaaccag aatcaggttt tagggcttat
     3061 tccgcgaaca aagggggcgg atgccgaaaa tccgattaat atattaaaat taaatttgtt
     3121 taaaaacata aagttgtaaa caagtatctc atataagcct ttttcattaa acagatagtc
     3181 agatattttg tgctaaaaat ttatataata tttaaattaa tatcaagtta taaaaatata
     3241 tagaatttta ttttgtttat ttataatttt aagcaataat ctaaatcagg cattttgatt
     3301 cccctgtttt aaaaaatact tggcaaggtg tgaaaaaagg cgtacattcc gctacacaga
     3361 attacagacg cagcggagca atgccgtctg aaaggatttt ccggtcagtc ttgcgattgg
     3421 tcggggtttc atcggaaacg gtgaaacgaa agtttgccgg cgtagagttg agctacgcgg
     3481 gcaaagccgc aggcgaaagc ctgtattgtt tgtgaagcgt aaatctctga tttgaggtat
     3541 tggggcaatc ctgtgggggg ttgcctcttt ttttatccgc cttttaatga cacaataggc
     3601 gcaagtctgt ttttgaatgc aaggtactgc catgaatacg attttggctt tcgatattga
     3661 aaccgtaccc gatgtgcagg gtatccgaac attgtacgag ctgccgtcct cgctgcccga
     3721 cgatgaagtg gtgctgtttg cccagcaaaa acgccgtgct cagacgggtg gggattttat
     3781 gcagcatcat cttcatcaga ttgtggcgat ttcgtgctgc atgcgttggg ggcaggataa
     3841 agtccatgtc ggcaccatcg gcgagatgga cgatggcgaa gaagtcgtga ttgccaaatt
     3901 tttcgagttg attgaaaaac atacgccgca actggtcagt tggaacggcg gcggtttcga
     3961 cctgccggtt ctgcattacc gctccctgat atacggcatt aacgccgcgc gctattggga
     4021 tatgggcgac ggcgatttcg gcgacagccg cgatttcaag tggaacaact acatcagccg
     4081 ttatcaccaa cgccactgcg atttgatgga tttgctcgcg ctttaccagc cgagggcaaa
     4141 cgtgccgctg gacgatatgg cgaaactgtg cggttttccg ggcaagctgg gtatggacgg
     4201 cagcaaggtg tgggatgcgt tccacgcggg caggctgaaa gaaatccgca attattgcga
     4261 aaccgatgcc gtgaatacgt atttgatgta tctgcgtttt tgtctggtca gcggcagatt
     4321 cgacgcggac gaatacgaaa tggaaatcaa gcggatcaga aactatcttt ccacccaaac
     4381 agaagataaa ccgcattggt cagaatttgc ccaagcgtgg aaatagaaaa cctgctgtcc
     4441 gaaggcggta cgcttgtgcc gccgtttcgg tttcagacgg catatggtgg attaaattca
     4501 aaccggtaca gcccgtacta tctgtactgt ctgtggcttc gtcgccttgt cctgattttt
     4561 gttaatccgc tttaaaagct gtatccgtgc tgtctgaagc cttttccagt caaaccaaac
     4621 aatattgaaa gaaaaaaatg agcaaaaccg tccgttatct gaaagattac caaacgcctg
     4681 cctaccgcat ccttgaaacc gacctgcatt ttgatattgc cgaaccgcaa actgtcgtga
     4741 aatcccgttt gacggtcgag ccgcagaggg tgggggagcc gctggtgttg gacggttcga
     4801 cgaaactctt gtccgtcaaa atcaacggcg tggcggcgga ttatgtgttg gaaggcgaga
     4861 ctctgacgat tgcagacgtg ccgtccgaac gcttcaccgt cgaagtggaa accgagatcc
     4921 tgccggcgga aaacaaatcg ctgatggggc tgtatgcttc cggtggcaat ctgtttaccc
     4981 aatgcgagcc ggagggcttc cgcaaaatca cgttctacat cgaccgtccg gatgtgatgt
     5041 ccaaattcac gaccaccatc gttgcggaca aaaaacgcta tcccgttttg ctctccaacg
     5101 gcaacaaaat cgacggcggc gagtgttcag acggccgcca ttgggtgaaa tgggaagacc
     5161 cgtttgccaa accgagctat ctgtttgctt tggtcgcggg cgatttggcg gtcacggaag
     5221 actgtttcac cacgatgggc ggcagaaacg tcaaaatcga gttttacact gccgaggcgg
     5281 acaagcctaa ggtcggcttt gccgtggaat ccttgaaaaa cgcgatgaag tgggacgaaa
     5341 cgcgcttcgg tttggaatac gacttggata ttttcatggt cgtcgccgtg ggcgatttca
     5401 atatgggtgc gatggaaaac aaggggctga acatttttaa taccaagttc gtccttgccg
     5461 acagccgtac cgccaccgat accgattttg aaggcatcga atccgtggtc ggacacgagt
     5521 atttccacaa ctggacaggc aaccgcgtta cctgccgcga ttggttccag ctttcgctga
     5581 aagaagggtt gaccgtgttc cgcgaccaag aattttccgg cgaccgcgcc agccgcgccg
     5641 tgcgccgcat cgagaacatc cgcctgctgc gccagcacca gttccccgaa gacgcaggcc
     5701 cgaccgccca tccggtgcgc cccgccagct atgaggagat gaacaatttc tacaccatga
     5761 ccgtttatga aaaaggcgcg gaagtggtgc ggatgtatca caccttgctc ggcgaagagg
     5821 gcttccaaaa aggcatgaag ctctatttcc aacgacacga cgggcaggcc gtgacctgcg
     5881 acgatttccg cgcggcgatg gcggacgcga acggcatcaa tctcgaccag ttcgccttgt
     5941 ggtacagcca ggcgggcacg cccgttttgg aagcggaaag ccgtctgaaa aacaatattt
     6001 tcgagttgac cattaaacaa accgtgccgc ccacgcccga tatggcggac aagcagccga
     6061 tgatgattcc cgtcaaaatc gggctgctga accgcaacgg cgaagcggcg gcattcgatt
     6121 atcagggcaa acgcgcgacc gaagccgtat tgctgctgac cgaagccgaa cagatcttcc
     6181 tgctcgaagg cgtaaccgaa gccgtctttc cctcgctgct gcgcgggttc agcgcgccgg
     6241 tgcatctgaa ctatccgtac agcgacgacg acctgctgct tctgctcgcc catgacagcg
     6301 acgccttcac gcgctgggaa gccgcacaaa cgctctaccg ccgtgccgtc gccgccaacc
     6361 ttgccgcact ttcagacggt attgaactgc cgaaacacga aaaactgctt gccgccgtcg
     6421 aaaaagtcat ttcagacgac ctcttagaca acgccttcaa agccctgctt ttgggcgtgc
     6481 cgtctgaagc cgagctgtgg gacggcgcgg aaaacatcga cccgctgcgc taccatcagg
     6541 cgcgcgaagc cttgttggac acgcttgccg tccgcttcct gccgaaatgg cacgaattga
     6601 accgtcaggc ggcgaagcag gaaaaccaaa gctacgagta cagccccgaa gctgccggct
     6661 ggcgcacgct gcgcaacgtc tgccgcgcct tcgtcctgcg cgccgacccc gcgcacatcg
     6721 aaaccgttgc cgaaaaatac ggcgaaatgg cgcaaaacat gacccacgaa tggggcatcc
     6781 tgtccgccgt caacggcaac gaaagcgata cgcgcaaccg cctgctggcg cagtttgccg
     6841 acaagttttc agacgacgcg ctggtgatgg acaaatattt cgcccttatc ggctcaagcc
     6901 gccgcagcga caccctgcaa caggttcaaa ccgccttgca gcatccgaaa ttcagcctcg
     6961 aaaaccccaa caaagcccgt tcgctcatcg gcagcttcag ccgcaacgtc ccgcatttcc
     7021 acgcagaaga cggcagcggc taccgcttca tcgccgacaa agtcatcgaa atcgaccgct
     7081 tcaacccgca ggtcgccgcc cgtttggtgc aggcgttcaa cctctgcaac aagctcgagc
     7141 cgcaccgcaa aaacttggtg aaacaagcat tgcagcgcat tcgggcgcag gaaggattgt
     7201 cgaaagacgt gggcgaaatc gtcggcaaaa ttttggattg aggccgtcaa acagaaaaac
     7261 aatgccgtct gatatagtta cacacacgtt ttatcatcac ttccccatcg ttttattacg
     7321 caatggcaaa acggccgcaa agtcatat
//
LOCUS       DAXHKG010000101         7221 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.101, whole genome shotgun sequence.
ACCESSION   DAXHKG010000101 DAXHKG010000000
VERSION     DAXHKG010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7221
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.101"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(81..165)
                     /locus_tag="ACFMWP_001590"
     tRNA            complement(81..165)
                     /locus_tag="ACFMWP_001590"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(129..131),aa:Leu,seq:caa)
     gene            442..1095
                     /locus_tag="ACFMWP_001591"
     CDS             442..1095
                     /locus_tag="ACFMWP_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HFC5892167.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQVASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1174..1827
                     /gene="hisG"
                     /locus_tag="ACFMWP_001592"
     CDS             1174..1827
                     /gene="hisG"
                     /locus_tag="ACFMWP_001592"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HFC5892168.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1931..2830
                     /locus_tag="ACFMWP_001593"
     CDS             1931..2830
                     /locus_tag="ACFMWP_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HFC5892169.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2827..4116
                     /gene="hisD"
                     /locus_tag="ACFMWP_001594"
     CDS             2827..4116
                     /gene="hisD"
                     /locus_tag="ACFMWP_001594"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HFC5892170.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4162..5259
                     /gene="hisC"
                     /locus_tag="ACFMWP_001595"
     CDS             4162..5259
                     /gene="hisC"
                     /locus_tag="ACFMWP_001595"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HFC5892171.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5256..6173
                     /gene="hisB"
                     /locus_tag="ACFMWP_001596"
     CDS             5256..6173
                     /gene="hisB"
                     /locus_tag="ACFMWP_001596"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HFC5892172.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIQQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6268..7137
                     /locus_tag="ACFMWP_001597"
     CDS             6268..7137
                     /locus_tag="ACFMWP_001597"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC5892173.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
BASE COUNT         1888 a         2126 c         1722 g         1485 t
ORIGIN      
        1 aatttaatcc actatattta gttttatcta tttcattaaa cagcaataga caaaaaaaat
       61 aaccgctcta aaagcggttg tggtgcccag ggtcggactc gaaccgacac accttgcggc
      121 gggggatttt gagtcccctg cgtctaccaa tttcgccacc tgggctggtg aagaagtcgt
      181 cattataatg gcttttgaaa ttctgtaaac cttttttttg aaattatttt atctgttttt
      241 attttatttt tgattttaaa tagaattttt attattttaa tcttactgtt ctttccgctc
      301 caaagattct gtatgattcg gcaattcctg ccgtgcagac aacgtaaaaa aatactacat
      361 taaatctgcc aaacgcgtta agatggaaat attcaaattc cgtacgaatc aggttttgct
      421 atttattctt gggagattgt catgttttcc gtaccgcgtt cctttttgcc gggcgttttc
      481 gtacttgccg cgcttgccgc ctgcaaacct caagacaaca gtgcggcgca agtcgcttct
      541 tcaagtgcat ccgcgtcggc tgcggaaaat gcggcaaagc cgcaaacgcg cggtacggat
      601 atgcgtaagg aagacatcgg cggcgatttc acgctgaccg acggcgaagg caagcctttc
      661 agcctgagcg atttgaaagg caaggtcgtg attctgtctt tcggctttac gcactgtccc
      721 gatgtctgcc cgacagagct tttgacgtac agcgacacgt tgaagcagtt gggcgggcag
      781 gctaaggacg tgaaagtggt gttcgtcagc atcgatccgg aacgcgacac gcctgaaatc
      841 atcggcaagt atgccaaaca gttcaatccg gactttatcg gtctgacggc aacgggcgac
      901 caaaacctgc cggtcatcaa gcagcaatac cgcgtggttt ctgccaaagt caatcaaaaa
      961 gacgacagcg aaaactattt ggtcgaccac tcttccggtg cgtatctcat cgacaaaaac
     1021 ggtgaggttg ccattttctc gccttacgga agcgagccgg aaacgattgc tgccgatgta
     1081 aggactctgc tctgataaaa ccgtatgccg tctgcaccgt cggcgcctat tcagacggca
     1141 ttattgtttc aaccgacaaa ggacatccac accatgcagg ataatgcttt gacaatcgcc
     1201 ttatccaagg ggcgcatttt tgaggagacg ctgccgctgc ttgccgctgc cggcattgtt
     1261 ccgactgaag agcctgaaaa atcgcgcaag ctgattatcg ggacgaacca tgaaaacatc
     1321 cgccttgtca ttgtccgcgc aaccgatgtg ccgacttatg tccgctacgg cgcggcggac
     1381 ttcggcattg cgggcaaaga cgtgctgatc gaacacggcg gcacggggct ttaccggcct
     1441 ttggatttgg agattgccaa gtgccgcatg atggttgctg tgcgtaaagg gtttgattac
     1501 gaagcagctt cgcaacccgg atgccgtctg aagattgcca cgaagtatcc tgaaatcgcg
     1561 gcatctcatt ttgccggcaa gggtgtccat gtggacatta tcaaactgta cggctcgatg
     1621 gaacttgcgc cgctggtcgg cttgagcgat gcgattgtgg acttggtttc gacgggcaac
     1681 accttgaagg caaacggctt ggaagcagtc gaacacatcg tcgacatttc cagccgcctg
     1741 gtggtcaaca aggctgcttt gaaaacgaaa tacgcgctgc tggagccgat tattcaggcg
     1801 ttcggcggcg cagtgaaggc gaagtaagca tccatttgaa taaagatgcg ttttcagacg
     1861 accctatccg ttcccgccga caggtcgtct gaaaatatca ccggcagtaa actgtatagg
     1921 agaagttaaa atggttgcaa aaataaaaaa attctcagat tcaacccttt ccgttttgaa
     1981 taacggcgag cgtcggtttt atgtctattg tctgaccgac ctgaaaaaag acaaaatcct
     2041 ctacatcggc aaaggctgcg gtaatcgtat cttcgagcat gaatgggttg ctagtcgttc
     2101 acaagaccca gtctccggcg agattatcga tcggaaactc aaagccatct ccaaatgcaa
     2161 gaaactcggt cgctatatca tcagctatca tctgactgaa gtcgaagcac tcgccgccga
     2221 atctgcctta attcattttg ttaaatctgt cttgggtaaa aaactcaaaa ataaaattgc
     2281 cgggcatggt ccgggtggta ttagcgtaga agaactagat cgccgctttg gattctcttc
     2341 tctcccactt aacgagatta accccgacgg gctgattctc gccatcaaaa tccacaatgc
     2401 tttcgattta gatactgacg aagaattaga ctaccttttc gacaaccaag acgatgccaa
     2461 cctcaaatcg cgtacgttgg gcaactgggt tatcggtaaa gatgttgctt caaaagtgaa
     2521 atacgttatc ggcgttcaca ccggtctgca aaacgctgtt gtcagtgcat acgaagtgga
     2581 cggttttgaa acaatggttg aggaaaccaa aaacggtaga aaacaatccc gttaccgttt
     2641 ccgcactacc tctcgtagcg aagaggtatt agccaaactc ggtctgcaac aaaaatgcct
     2701 gcccgaattg aagtttggta gcgggggaga aaaagcgtat atcagaccca aaacagagac
     2761 agaaactgaa caagagaata ttcagacgac ccccaatcca aaaataaaaa aggaaaaaac
     2821 caaatcatga aaaaactcaa cacccaatcg cccgatttcc aagccggact caaagccctg
     2881 ctggcttttg aaaccgcgca aaaccccgaa accgaacgca tcgtcgccga catttgcgcc
     2941 gacgtgcaaa agcgcggcga tgcggctttg attgaataca ccaacaaatt cgatcagaca
     3001 aacgctaaaa gcatcgatga tttaatactc acgcaagccg atttgaacgc ggcgttcgag
     3061 cgcattccga acgacgttca gacggcattg cagaccgccg cccgccgtgt cgaaagctac
     3121 caccaacgcc aaaaaatgga atcgtggagc tacaccgatg aagacggcac gctgttggga
     3181 caacagatta ccccgcttga ccgcgtcggc atttacgtcc ccggcggcaa ggcggcatat
     3241 ccgagttccg tcatcatgaa cgccatgccc gcccacgtcg caggcgtgaa agaaatcatc
     3301 atggtcgtgc cgacaccgaa aggcgaacgc aacgacatcg tgcttgccgc cgcatacgtc
     3361 gccggcgtaa ccaaagtctt caccgtcggc ggcgcgcagg cggttgccgc cctcgcctac
     3421 ggcacggaaa ccatccccca agtcgataaa atcaccggtc cgggcaacgc cttcgtcgcc
     3481 gccgccaaac gccgcgtgtt cggcgtggtc ggcatcgaca tggtggcggg gccgtctgaa
     3541 atcctggtca tcgccgacgg cacgacacct gccgattggg tggcgatgga tttgttcagc
     3601 caggccgaac acgacgaaat tgcccaagcc atcctcatcg gcacgtcgca agcgtatctc
     3661 gacgaagtag aagccgctat ggaccgcctg atcgaaacta tgccgcgccg cgacatcatc
     3721 gaagcctcgc tcggcaacag gggcgcgatg atactcgcca aagacttgga cgaagcctgc
     3781 gaaatcgcca actacatttc ccccgaacac ttggaactgt cagtcgaaaa tccgcaggaa
     3841 tgggcgaaaa aaatccgcca cgccggtgcg attttcatgg gacgctacac cggcgaaagc
     3901 ctcggcgact actgcgccgg tccaaaccat gtattgccca ccagccgaac cgcccgcttt
     3961 tcctcgcctt tggggacata tgatttccaa aaacgctcca gcctgattca ggtttcggaa
     4021 cagggcgcgc aaaaattagg cgaaaccgcc agcgtgctgg cacacggcga aagcctgacc
     4081 gcccacgccc gcgcggcaga gttccgtatg aaataatgcc gaaacggcgt acaggcatat
     4141 tccaaccatt aaggaaacac gatgaaatcc gtccgctcct tcatccgcga cgacatacaa
     4201 gctatgtcgg catatcagat tgccgacgtt ccgcccggct ttgccaaact cgattcgatg
     4261 gaaagtcccg tccacccttt tgccggacat gaaacgctgt tgcaggaatg gcaggcacgg
     4321 cttgccgccg cgcccatcca tctttacccc aatccctccg gcagcggttt acaggaagca
     4381 ttacgttcgg cgttcgacat tcccgactgc gccgacatcg cgctgggcaa cggctcggac
     4441 gagctgatac agttcatcac gatgctgacc gccaaaccgg gcgcggcaat gttggcagcc
     4501 gaacccagtt tcgtcatgta ccgccacaac gccgcgctgt acggcatgga ttatgtcggc
     4561 gttccactga acggagattt caccctcaac ctgcccgccg tcctcgaagc cgtcaggaag
     4621 caccgccctg ccctgacctt tatcgcctac cccaacaacc ccaccggcgt atgtttcacg
     4681 cgtgccgaaa tcgaagccgt catcgaagct tcagacggca tcgtcgtcgt cgacgaagcc
     4741 tacggcgcat tcaacggcga cagcttcctg ccgcaggcgg gcagcattcc caacctcatc
     4801 gtcatgcgta ccgtcagcaa aatcggtttt gccggactgc gtatcggcta tgcggcaggc
     4861 tgtcccgaag tcatcggcga actgcaaaaa atcctgccgc cctacaatat gaaccaactg
     4921 agcctgacca ccgccaaact cgccctgcaa cactacggca tcatctctgc caacatcgac
     4981 agcctgaaaa acgaacgcga acggatgttc gccgaattgg gcaaaatatg ccgtctgaac
     5041 acctttccaa gtcaggcaaa cttcattacc atacgcgtac ccgatgccga tttgttgttt
     5101 gacacgctca aacaaaaccg catcttggtt aaaaaactgc atggcgcgca cccgcttttg
     5161 gaacactgcc tgcgcattac cgtaggcagc cccgcacaaa acgatgccgt tctcaacatc
     5221 attcgccaac tttactgcca accaacggat ttcctatgaa tttgactaaa acacaacgcc
     5281 aactgcacaa ctttctgacc ctcgcccaag aagcaggttc gctgtccaag ctcgccaaac
     5341 tctgcggcta ccgtaccccc gtcgcactct acaaactcaa acaacgcctt gaaaagcagg
     5401 cagaagaccc agatgcacgc ggcatccgtc ccagcctgat ggcaaaactc gaaaaacaca
     5461 ccggcaaacc caaaggctgg ctcgacagaa aacaccgcga acgcactgtc cccgaaaccg
     5521 ccgcagaaag caccggaact gccgaaaccc aaattgccga aaccgcatct gctgccggct
     5581 gccgcagcgt taccgtcaac cgcaatacct gcgaaaccca aatcaccgtc tccatcaacc
     5641 tcgacggcag cggcaaaagc aggctggata ccggcgtacc cttcctcgaa cacatgatcg
     5701 atcaaatcgc ccgccacggc atgattgaca tcgacatcag ctgcaaaggc gacctgcaca
     5761 tcgacgacca ccacaccgcc gaagacatcg gcatcacact cggacaagca atccagcagg
     5821 cactcggcga caaaaaaggc atccgccgtt acggacattc ctacgtcccg ctcgacgaag
     5881 ccctcagccg cgtcgtcatc gacctttccg gccgccccgg actcgtgtac aacatcgaat
     5941 ttacccgcgc actaatcgga cgtttcgatg tcgatttgtt tgaagaattt ttccacggca
     6001 tcgtcaacca cagtatgatg accctgcaca tcgacaacct cagcggcaaa aacgcccacc
     6061 atcaggcgga aaccgtattc aaagccttcg ggcgcgccct gcgtatggca gtcgaacacg
     6121 acccgcgcat ggcaggacag accccctcga ccaaaggcac gctgaccgca taaaaaacca
     6181 taccgtctga aacacccgca ggcttttcag acggtatcgg aacagataag attacactac
     6241 actacaaaca gaaaaggagt aaacatcatg tccgcaaacg aatacacaca aatcggctgg
     6301 ataggcttag ggcaaatggg tctgcctatg gtaacgcggc tcttggacgg cggcatcgaa
     6361 gtcggcgtat acaaccgctc gcccgacaaa actgccccca tctccgccaa aggcgcaaaa
     6421 gtttacggca acaccgccga actcgtccgc gactatcccg tcattttcct gatggtttcc
     6481 gactatgccg ccgtgtgcga catcctgaac ggagtccgcg acggattggc cggcaaaatc
     6541 atcgtcaaca tgagcaccat ctccccgacc gaaaacctcg ccgtcaaagc acttgtcgaa
     6601 gccgcaggcg gacagtttgc cgaagcaccc gtttccggat cggtcgggcc cgccaccaac
     6661 ggcacgctgc tgattctgtt cggcggcagc gaagccgttt taaacccgct gcaaaaaata
     6721 ttttccctcg tcggcaaaaa aaccttccat ttcggcgatg tcggcaaagg ttcgggcgcg
     6781 aaactcgtct tgaactcgct cttgggcatt ttcggcgaag cgtacagcga agcgatgctg
     6841 atggcgcggc agttcggcat cgataccgac accatcgtcg aagccatcgg cggctcggca
     6901 atggactcgc ccatgttcca aaccaaaaaa tccctgtggg caaaccgcga attcccaccc
     6961 gccttcgccc tcaaacacgc ctccaaagac ctcaacctcg ccgtcaaaga gcttgaacag
     7021 gcaggcaaca ccctgcccgc cgtcgaaacc gttgctgcca gctaccgcaa agcagtcgaa
     7081 gccggctacg gcgaacagga cgtttccggc gtttacctga aattggcaga acactgattg
     7141 ccttttccaa acacaatgcc gtctgaacat atttcagacg gcatttttat caccccacgc
     7201 ttaaaatcag tcccgattat g
//
LOCUS       DAXHKG010000102         7086 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.102, whole genome shotgun sequence.
ACCESSION   DAXHKG010000102 DAXHKG010000000
VERSION     DAXHKG010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7086
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.102"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(66..425)
                     /gene="rnpB"
                     /locus_tag="ACFMWP_001598"
     ncRNA           complement(66..425)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACFMWP_001598"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(504..1607)
                     /gene="prfB"
                     /locus_tag="ACFMWP_001599"
     CDS             complement(504..1607)
                     /gene="prfB"
                     /locus_tag="ACFMWP_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HFC5892174.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1710..2603)
                     /locus_tag="ACFMWP_001600"
     CDS             complement(1710..2603)
                     /locus_tag="ACFMWP_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HFC5892175.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2945..3394
                     /locus_tag="ACFMWP_001601"
     CDS             2945..3394
                     /locus_tag="ACFMWP_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC5892176.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3468..3776
                     /locus_tag="ACFMWP_001602"
     CDS             3468..3776
                     /locus_tag="ACFMWP_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892177.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3892..4734
                     /locus_tag="ACFMWP_001603"
     CDS             3892..4734
                     /locus_tag="ACFMWP_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HFC5892178.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4724..5470
                     /locus_tag="ACFMWP_001604"
     CDS             4724..5470
                     /locus_tag="ACFMWP_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HFC5892179.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLLDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5492..6079
                     /locus_tag="ACFMWP_001605"
     CDS             5492..6079
                     /locus_tag="ACFMWP_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HFC5892180.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6085..6264
                     /locus_tag="ACFMWP_001606"
     CDS             6085..6264
                     /locus_tag="ACFMWP_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HFC5892181.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6496..6936
                     /locus_tag="ACFMWP_001607"
     CDS             6496..6936
                     /locus_tag="ACFMWP_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HFC5892182.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1806 a         1885 c         1614 g         1781 t
ORIGIN      
        1 caacctaaat aaaaatgccg tctgaaccat atttcaggtt tcagacggca tttgcgtgtc
       61 ggatgcacac cggacaggcg gtaagccggg ttctgtctcg gacagtcatt cctctaggca
      121 taccgttacc agtatgctca agcaacctac ccgaacgctc ggcgggcagc gtcattgcgt
      181 tctgtttggt cttgctccga atggggtttg gcctgccgca tattgttacc aaatgcgcgg
      241 tgcgccctta ccgcaccttt tcacccttgc ctgtgctgcc aaagcagcca tcggcggttt
      301 tgctttctgt tccactttcc gtcgcgttac cgcgcccggc cgttaaccgg cattctaccc
      361 tgcggagccc ggactttcct ccccgtatgc cttacgcgat acgcggcgac tgtctgctcg
      421 tcccgtgtgc ggcgcggatt ataacacgaa acgcaaaaat gccgtctgaa acggtacagg
      481 tttcagacgg catacagcct aaactacacg ccctgtttca ggctggcttc gataaagccg
      541 tccaaatcgc catccaatac ggctttggtg ttgccgactt cgtagcctgt acgcaagtct
      601 ttgatacgtg aggaatccaa aacatacgaa cggatttggc taccccaacc tacatcggat
      661 ttaccttctt ccaacgcctg tttctcttca ttgcgtttgc gcatttccaa ttcatacagt
      721 ttggacttca acatttccat cgcggcggct ttgttggcgt gttgcgaacg gtcgttttga
      781 cattgcacca caatccccgt cggctcgtgg gtaatacgca cggcggagtc ggttttgttg
      841 atgtgctgac cgcccgcgcc cgatgcgcga taggtgtcga tacgcaaatc ggcggggttg
      901 atttcgattt cgatggaatc atcgatttca gggtaaacga acacggaggc aaacgaagta
      961 tggcgtttgt tgttcgagtc aaacggtgaa tagcgcacca agcggtgaac gccagtttcg
     1021 gtacgcagca aaccataggc gtattcgcct tccactcgga tagtcgcgcg gttgatgccc
     1081 gcgatttcgc cgtcgtcttc ttcgaggatt tcgattttga agcctttgcg ctcggcgtag
     1141 cggctgtaca tgcggaacag catacccgcc cagtcttccg cttccgtacc gcccgcgcct
     1201 gcggtgatgt cgataaagca gttgttcggg tcggcgggct ggttgaacat ccgtttgaac
     1261 tccaaatccg ccatctgttt ttccagcccc gccacatctt cctgcacggc ggcaaaacct
     1321 tcttcgtcgt tttcttcgac ggtcatttca atcagcatgc ggttgtcttc gatgcccgaa
     1381 gcgatgttgt cgagcgtcaa cacgatgcct tcgaggattt tgcgctcttt gccgatttct
     1441 tgggcgcgtt tcgggtcgtt ccaaagttcg gggtcttcgg aaagaccgat aacttcttcc
     1501 aatcggtctt tcttaccctg ataatccata taaactcgga tgtcttcgct gcgcttttcc
     1561 aaatcattca gggtattgtt gagctggttg attacttcgg cttccatgat tcttttgttc
     1621 tttcaaaatt ttaggggcgt attgtacggg attcgggtat ttttttctat ggataaagcc
     1681 ttctagaaac acgttcggac ggcatagcgt caataacggt atgccgccag tttgcgtttg
     1741 atttcaggca atgcggcacg tgctgcctcc tcacccaact ggatggcacg ttttttctga
     1801 tcgaatccgc cgactgcacc caaatccaaa acctgcggtt tgataaccac atccgcctgc
     1861 cccaactcat tttgcaacgc ggaaacgctc attacgttca gcgtctgatc gagataagag
     1921 aagaagcctt ggctgatgtt tttgcccgga cgggcggaaa tatcgacggc aatcacgaaa
     1981 ttcgccccct gccgccgggc ggcactgacg ggcacgggct gcgacagacc gccgtcaaca
     2041 tatgtatgcc tgccgatgat aacgggttgg aacacattgg gaatggcggc ggaagcgcgc
     2101 acagcctgcc cggcattccc ttgattgaaa gcgacggcct tgccggtttc aaaatcagta
     2161 gcaacagcgg caaatttgat gggaaactgc tgaatctgcc tgccgccgac ttttcggttg
     2221 atgtaatttt gcagcttttc gcctttgata aaaccactgg tggacaaggt taaatcgact
     2281 aaatcggttt tgcctaaaat ttcggcttcc aattcgaggc ggtcgggcga catacccgat
     2341 gcaaaaaggc tgccgacaat cgaacctgcc gatgtgccgg taaccacctt cacaggaata
     2401 ccgttttctt tcaaaacctt aataatacct acatgggcaa atcctttaga tgcgccgcca
     2461 ccgagtgcca aaccgaccac tgcggcgggt ttggcggttt gcaccggctt gcgggcggca
     2521 ttatttcccg ccgtgccgca ggcggcaagc aacgcggcgg cggcgattgc caaaagcggt
     2581 ctgatttttg aaaacgttac catattttcc attcctttat atatcgcacc ccgtcaaaaa
     2641 gagggattgc ttttcttaac aacccccttt gacagccaag caaatggagg ctttgttaag
     2701 tcatcatcaa aattaatatt tctttttttc ctttacggaa attatatttg aaggcatact
     2761 atccaaggtg ggaattatct cacaacaccg ccgttatcca aatatcccgc ctttttccct
     2821 tcctttccat caaaatactt tctttttata ttcattaact tgttaaatca ttggctgccg
     2881 ggtgtcagtt tttccgacaa aatccgtcta atggggtatc aacagaacca aaacaggaac
     2941 acttatgaaa atcggaacaa cttggcagac ggcatccgct atgctggttt tgcgtctgtt
     3001 tgccgcatat gaatttttgg aatcgggttt gcaaaaatgg aacggggaga attggttttc
     3061 tgaaatcaac gatcaattcc cattcccgtt caacttgctg ccggacgcgt taaactggaa
     3121 tctcgctatg tatgcggagc ttttactgcc cgtactgttg cttttgggtt tggcaacgcg
     3181 tctgtcggca ttagggctga tggtcgttac cgccgtcgct tgggctgcgg ttcacgccgg
     3241 ttcgggttac aatgtctgcg acaacggtta taaaatggct ttaatttata tcgtggtatt
     3301 aatcccgctg cttttccagg gtgcgggcgg atggtcgctg gatacgctgc tgaaaaaacg
     3361 gttttgcccc caatgccgtc tgaagcaaga ttgattcagt cgtggaatct gactttaaac
     3421 attccaacct tatctcgtta acttgatatt ctgaaaagga aatagaaatg aacaaaaaca
     3481 ttgctgccgc actcgccggt gctttatccc tgtctttggc cgccggtgca gttgctgcca
     3541 acaaaccggc aagcaacgca acaggcgttc ataaatccgc ccatggctct tgcggcgcgt
     3601 ccaaatctgc cgaaggttcg tgcggcgcgg ctggttctaa agcaggcgaa ggcaaatgcg
     3661 gcgagggcaa atgcggtgcg accgtaaaaa aaacccacaa acacaccaaa gcatctaaag
     3721 ccaaggccaa atctgccgaa ggcaaatgcg gcgaaggcaa atgcggttct aaataatccc
     3781 accccttcaa accaagccgc gtttttcagt aaaatgcggc ttttttaacg gcaaacaaag
     3841 attttttaac aagcacatca ttcttttgtg ccatccgaac cgggtaaaaa tatgattcaa
     3901 cacgcaggct tgggctaccg ccgcgacttg gcggaagact ttctctcgct ttccgaaaac
     3961 agcccgatat gctttatcga agccgcaccg gaaaactggc tgaaaatggg cggctgggcg
     4021 cgcaaacagt ttgaccgtgt ggcggaacgg ctgccgctgg cgttgcacgg attgtctatg
     4081 tcgctgggcg ggcaagcacc gctggatact gatttgatag acggcatcaa agaaatgatg
     4141 cgccgttacg attgcacgtt tttctccgac catttgagct actgccacga cggcggtcat
     4201 ctttacgatt tgttgccgct gccctttacc gaggaaatgg tgcatcatac ggcgcggcgt
     4261 atccgcgaag tgcaagaccg tttgggctgc cgcatcgccg tggaaaacac gtcctactat
     4321 ctgcattccc cgcttgccga gatgaacgag gtcgagttcc tcaacgccgt cgcacgtgag
     4381 gccgattgcg gcattcatct ggatgtgaac aatatctacg tcaacgccgt caatcacggc
     4441 ctgttgtcgc cggaggcttt tttgaaaaac gttgacgcag atcgcgtgtg ctatatccat
     4501 attgccggac atgacgtgga aacgccggaa ttgttgattg atacacatgg cgcggcagtt
     4561 ttgccgactg tttgggactt gctcgaactt gcctatgcca agctgccgac gattccgccc
     4621 accctgttgg aacgcgattt taatttcccg ccttttgccg aactcgaagc cgaagtcgcc
     4681 aaaatcgccg attatcaaac gcgtgccgga aaggaatacc gccgtgcagc ctgaaacctc
     4741 cgcccaatac cagcaccgtt tcgcccaagc catacgcggg ggcgaagccg cagacggtct
     4801 gccgcaagac cgactgaacg tctatatccg cctgatacgc aacaatatcc acagctttat
     4861 cgaccgctgc tataccgaaa cgcggcaata ctttgacagc gaagaatgga gccgtctgaa
     4921 agaaggtttc gtccgcgacg cgcacgccca aacgccctat tttcaagaaa tccccggcga
     4981 gttcctacaa tattgccaaa gcctgccgct tttagacggc attttggcac tgatggattt
     5041 tgaatatacc caattgctgg cagaagttgc tcaaattccg gatattcccg acattcatta
     5101 ttcaaatgac agcaaataca caccttcccc tgcggccttt atccggcaat atcgatatga
     5161 tgttaccgat gatttgcatg aagcggaaac agccttgtta atatggcgaa acgccgaaga
     5221 tgatgtgatg taccaaacat tggacggctt cgatatgatg ctgctagaaa taatgggttc
     5281 ctccgcgctt tcgtttgaca ccctcgccca aacccttgtc gaatttatgc ctgaggacga
     5341 taattggaaa aatattttgc ttgggaaatg gtcaggctgg actgaacaaa ggattatcat
     5401 cccctccttg tccgccatat ccgaaaatat ggaaggcaat tccccgggcc aaaaccatct
     5461 atccgcataa aattaccttg ttcccgatac tatgccgcta cccgacctga ccgatgccga
     5521 attaatagag tcgcgtaaac tgcttctgca ttttgcgcgg cttcagttgc ccgaccaccc
     5581 tgatttggct gaagatttag tgcaggaaac attgctgtcc gcatacagcg caggcgacag
     5641 ttttcaaggc agggcacttg tcaacagctg gctttttgcc atattgaaaa acaaaattat
     5701 tgacgcatta cgtcaaatcg gaaggcagag gaaagtcttt accacactgg atgacgagct
     5761 actggatgaa gcatttgaaa gccatttttc ccaaaacggg cattggacgc cggaagggca
     5821 gccgcaacat tggaacactc cggaaaaatc attaaacaac aacgaattcc aaaaaattct
     5881 gcaaagctgc ctatacaacc tgcctgaaaa caccgcacgg gtatttaccc tgaaggaaat
     5941 actcggtttt tcatccgacg aaatacaaca aatgtgcggt atcagcacgt ccaactacca
     6001 caccattatg caccgcgccc gagaatcatt gcgccaatgc ctgcaaatca aatggttcaa
     6061 ccaagaaaac ccgaagtaaa cgttatgaaa aaatgccgcg atatcgccct gcttctttcc
     6121 aaacatcagg accgggaaac caccccgggc gagaagattt ccatatacac acacctgctg
     6181 ttctgtccgt attgccgtga atataaaaga caacttcaaa ccatcaaaag atcactggca
     6241 aaaacaacca gaacttcaaa ataaatgccg tctgaaaagg cttcagacgg cataagctga
     6301 cggaaacaaa tcaaaccgat ttactgttat cggcagttca tccataatac acgcttcaaa
     6361 agcagcatat tcctccatac ggaatatata aatacgcaaa acacgaaggc tgcatcaatt
     6421 tgctttattt gccttatttc acagacggcg ctacccctcc cgcccaaccc gttctttctg
     6481 aatgagcaga tttcaatgat taaggaaacc ctaatgcgcc caatcttcct atctttcgtt
     6541 ttactcccta ttttgataac cgcctgcagc acaccggaca agtctgcccg atgggaaaat
     6601 atcggcacaa tctcaaacgg caatattcat acatatatca ataaagacag cgtgagaaaa
     6661 aacggaaatc tgatgatttt ccaagataaa aaagttgtta ccaatctaaa acaagaacgt
     6721 tttgccaaca cccccgcata caagactgcc attgccgagt gggaaatcca ctgcaacaac
     6781 aaaacatacc gcttaagttc gctacagttg tttgatacaa aaaacacgga aatttccaca
     6841 caaaactaca cagcctcttc cctccgcccg atgagcatcc tgtccgggac attaaccgaa
     6901 aaacaatatg aaaccgtatg cggaaaaaaa ctctgattgc aacttataca caaacttacc
     6961 cacaaacctt atcataaaaa tgccgtctga aatactgaaa tatcagcatt tcagacggca
     7021 ttttgccatt ccctgaaaat tatccacaaa gttatccaca ttatttttta aaaccggctt
     7081 ccatcc
//
LOCUS       DAXHKG010000103         6970 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.103, whole genome shotgun sequence.
ACCESSION   DAXHKG010000103 DAXHKG010000000
VERSION     DAXHKG010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6970)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6970)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6970
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.103"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            409..615
                     /locus_tag="ACFMWP_001608"
                     /pseudo
     CDS             409..615
                     /locus_tag="ACFMWP_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
     gene            615..812
                     /locus_tag="ACFMWP_001609"
                     /pseudo
     CDS             615..812
                     /locus_tag="ACFMWP_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(1004..2407)
                     /gene="mtrE"
                     /locus_tag="ACFMWP_001610"
     CDS             complement(1004..2407)
                     /gene="mtrE"
                     /locus_tag="ACFMWP_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HFC5892183.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(2462..5665)
                     /gene="mtrD"
                     /locus_tag="ACFMWP_001611"
     CDS             complement(2462..5665)
                     /gene="mtrD"
                     /locus_tag="ACFMWP_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HFC5892184.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LRATYPGASAQVMEDSVLSVIERNMNGVEGLDYLSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(5677..6915)
                     /gene="mtrC"
                     /locus_tag="ACFMWP_001612"
     CDS             complement(5677..6915)
                     /gene="mtrC"
                     /locus_tag="ACFMWP_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HFC5892185.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1616 a         1953 c         1827 g         1574 t
ORIGIN      
        1 atcaaacatc aaattggact gaccaatcag ggcggattct aatgacacgc cgttcccgcc
       61 gtcaacggca tttacctcgc accgcccccg aaacacaaga aaaaactaca ccaaactaca
      121 atttttgttt atacaaatat ttgttttgac aggatttaaa cgaaagctcc gattcaaatc
      181 tgccgaaccg cccaaaaata tatagtggat taacaaaaat caggacaagg cgacgaagcc
      241 gcagacagta cagatagtac ggtaaggcga ggcaacgccg tactggttta aatttaatcc
      301 attctattga cctgaatatt aaagtttcgc aaagtaatgc aacgttgctt taattggttt
      361 gaccactatt gccgacgatt agaaaaatat tttcggagat gttcaattat ggaaacttgg
      421 gttcaaaact acacggcaat cggcggcagc ctgtatctga ctgccgccgc cgcactctta
      481 cccatcgtct ttttctttgc cgcgctgacc gtcctgaagc tgaaaggcta tcaggcgggg
      541 ctttatacgc tgctgattgc gcttgccgtt gccgtattcg gcttcgggat gccggcgggt
      601 atggcggttt cttccctgcc gccgcagccg cactgaccca acgcccctac gccacgctgg
      661 atttgaccgc gcattacaaa atcggcaaat ccacccgcat cggtttggac tttgaaaacg
      721 tgttcaacaa acgctaccgc cctatgcccg acattcacgt ttacggcacg ccgcgcagcc
      781 tgaccgcaac cgtcaaacat atagtggatt aacaaaaatc aggacaaggc gacgaagccg
      841 cagacagtac aaatagtaca acttggtgct tcagcacctt agagaatcgt tctctttgag
      901 ctaaggcgag ccaacgctgt actggttttt gttaatccac tataaagaaa gaaatgccgt
      961 ctgaaacctt atcgtttcag acggcatttt attgcccgac cggttatttg tcggtttggg
     1021 tatcccgttt caatccgccg ccgagtgcct tgtacaaatc ggcaaggttt tcggcgcggg
     1081 tcagttgtgc cgacaaagcc gcaccttccg ccgaatagct gctgcgttcc gcatcgagca
     1141 agtcgagcgc gccggatacg ccgtgtttgt aacgcagacc gaccaaacgc aacgcttctt
     1201 tagaggcgcg gctttgtttg cttaaagcgt cataggcttt atccaactgc tcgcgcgccg
     1261 ccaatgcgtt tgccacgtct tgaaatgcgg attggacggc ggattcatag gcaacgattt
     1321 gtgcctgttg gcgcagcttg gctacatcaa ggttcgcctt gttcgtaccc caggtaaaaa
     1381 tcggcagggt aatagacggc gcgaacgacc aaacgcccgt gccgcttttg aacaacccac
     1441 ccaattcggc agaacccgta ccgacggttc cggtcaggcg gatggatggg aaaaaggcgg
     1501 cgcgtgccgc accgatattg gcgtttgcct gtttgagcgc gtgttcggca gcacggatat
     1561 cgggacggtc gagcaatact tcggaactca aaccggccgg cagtttttca acaaaaaact
     1621 gcttgtccag cggcaaaccg gcaggcaggt cttcgggtat cggttggtta atcaaggttg
     1681 ccaaggcatt gcgcgcctgt tcgcggctgc gcgcggcatg ggcataatcg gctttggcag
     1741 attcgattag ggcttcctgc tgacgtaggg cgacggcgga aatcacgcct gccttgtaac
     1801 gtaattcgga cagcttgtag gtttcctcgc gcgttttcaa aacacgttgc gccaaagaca
     1861 tcgcttcttc ggcgtaacgt tcgttgaaat aggctttggc aacggtggca atcaggctca
     1921 aatgtgccgc atcgcggttg gcggtgctgg cgaaatagcc ttgcagtgcc gcctcgctgc
     1981 tgctgcgtac acgcccgaac aaatcgagtt cgtaagatgc cgcacccagt ccgactttgt
     2041 agctgctgct tacattgccg ccgctcaagc tgccttggcg cgagtcgttc gcattggcgg
     2101 caagcgtggg caggaggttg ttgcgctcaa tcatgtattg tttgcggtag atttcgctgt
     2161 tcaatacggc ggtacgcaaa ctggtattgc gctcgagtgc gatgtcgatc agcttttgca
     2221 ggcgcgggtc ggcaaaatag tcatgccaac ctaaatcgac cgcacggatg ccgctgtcgg
     2281 cggtatcgtt tttgaacgtt tcggcaactt cgactttggg ctgctcgtat tggggaatca
     2341 tggtgcaggc ggataatgcg aaggctgctg caacagaagt caaggtggtt ttcaatgtag
     2401 tatccataaa aaagtcctga tgccgtctga aaacccgtag gcgttcagac gtcatggttg
     2461 cttaatgttg gctgtcgtcc gaaccggtga tgcccgcttc ggcggcgtgt tttactgcca
     2521 tttcgtgttc gtgcgcggtt tctttgaaga atttgcgcac caccacatag aaaagcggaa
     2581 caaggaacac ggacaagagc gtgccgatga gcatccccca gaatacggtc gtgccgatgg
     2641 cgcgctggct ggcagaactt gcaccgccgg caatatacag gggaaccacg cccaaaataa
     2701 aggcgaacga ggtcatgata atcggacgga aacgcaggcg ggcggcttcc aaagcagctt
     2761 cgaccgcgct tttcccttgc gcttgaaggt ctttggcaaa ttcgataatc aaaatcgcgt
     2821 ttttcgcact caaacccatc acggtaacga aaccgacttg aaagtagatg tcgttggcga
     2881 acgagggaac gctgcccaac agtccttcaa acaggttgcg cccggttacg cccgcagccg
     2941 caccgatcaa acccaacgga atcacaagga tgaccgccag cggaatcgac cagctttcat
     3001 aaagcgcggc aagtaccaaa aatacggctg caaccgccaa accgtacaaa atcagggttt
     3061 gcgagccgcc ttttgcctct tcgcgcgact gtccgcccca ttcgaagctg taaccgccgc
     3121 ccaattcgtc aaccattttt tgaaccgccg ccatagcctg cccggtggaa acgccggttg
     3181 caggcgaagc ggacagcttc atcgaaggat aaccgttgaa gcgtacgctc tgttccgtac
     3241 cgttttccca agaaacagta gcaatggtgg aaagcggtac ggcgacgccg gatttgttcg
     3301 gcacggtcag gttcaaaata tcggcaggct gcatacgggc atcctcgtcg gcctgcacca
     3361 tcacgcgttg cagacggcct tggttcggga agtcgctgac ataagacgaa ctcagcgcac
     3421 ttgccaatgc ggtgcggatg tcggcaaacg aaatgccttg cgccgccgcg gcggcacggt
     3481 tgatgtcgat tttcaactgc ggcgagtctt ccaaaccgcc ggcacggacg gtgctggggt
     3541 caaacaaacc gctggcacgc attttctgaa tcaactcgtt gcgcttcgcc agcaatgcgg
     3601 tatggccggt attgttgcgg tcttgcaggt tgatgctcag gcccgaacca ttgcccaact
     3661 ccaaaatcgg aggcgggacg acggcgatgc caaaaccgtc tttaagcgtc cccatcatca
     3721 tacccgtcag cttgccggca atcgcaacgg catcgctgcc gggcgcggta cgctcgttcc
     3781 aatctttcaa tatggcaaaa cccatcgcca tattctgacc gctgcccgaa aagctgaagc
     3841 cggaaacggt aatgatgttt tctatttcag gaatgctttt cgccagttgg gtaacttgcg
     3901 ccaaagtcgc attggtgcgc tcttgggtcg ctcctgcagg cagttgtacg ctgaccatga
     3961 cgaagccttg gtcttcggtc ggcaggaacg aagtcggcag gcgcataaac aggaacacgc
     4021 ccacaaccgc caagccgata tagacaacca tcatgcggaa agtcttacgc agcactttgg
     4081 caacccggcc ttcgtaaccg tgcgtccaac tgttgaattt cttgttaaac cagccgaaga
     4141 aacctttttt ctcttcgtga tgccctttcg ggattgtctt caacattgtg gcacacaaag
     4201 caggggtaag ggtcagcgca aggaaggcgg aaaatgcgat tgatgacgcc atcgtcaggg
     4261 caaactgttt gtaaatattg cccgtcgccc cgctgaacat cgccaacggt acgaacacgg
     4321 aaatcagaac ggcggtaata ccgatgaccg cgcccgaaat ctgacccatc gcttttttgg
     4381 tcgcttcttt gggcggcaag ccttcacccg ccataatgcg ctcgacgttt tcaaccacca
     4441 caatcgcgtc atcgaccacg atgccgatga ccaaaaccat cgcaaacatg gtcagtacgt
     4501 taatcgacat gcccatataa gagatgaagg cgaaaccgcc caacagcgaa atcggtacga
     4561 cgatggtcgg aatcagcgta taacggatgt tttgcaggaa gagatacatt acgacaaaca
     4621 ccagcaccat cgcttcgatt aaagtatgaa tcactttttc aatcgaaatt tcgacgaatt
     4681 tggaagtatc gtaaggggtt ttccagctca taccctgagg aaagtatttt tccaacgtcg
     4741 ccatgcgttc tttaaccgcc tttgccgtcg ccatcgcatt gccgctgttg gacagcatca
     4801 ccgccatacc ggtggtattt acaccgttca gacgggttga ggaagaatag tcttccatac
     4861 ccagtccgac ccttgccaca tccttcaggt aaacattaga accgtcggta ttggcgcgga
     4921 ggatgacgtt gccgaattct tctgccgtac ccaactgccc ttgcgccgtt acggtagccg
     4981 taaccgtctg tccgcgaacg gcgggaagcg aaccgataga acccgctgaa atctggacgt
     5041 tctgggcgga cagcgcactg ccgatatcgg caaacgacaa attgtagttt tgcagtttct
     5101 taggatcaac ccaaatccgc atcgcgcgtt gcgcgccgaa caggcgtacc tgccccacgc
     5161 cttcgatacg ctgcaactcg ggaacgatat tacgctgcgc gtagtcgttc atctcttcgg
     5221 ttgactgcac atccgacgaa agcatcacaa tcatcaggaa attggaacgc gccttggata
     5281 cggttacgcc gtattgctgg acggttgccg gcagcgtgct caatacttcg gaaagcttgt
     5341 tctgcacttc cacctgcgcc agattctcgt cggtatcggg cgtaaaggtc aggctcacgc
     5401 tgccgctgcc gctcgaatcg gcagaagtgg acagataatc caaaccttcc acgccgttca
     5461 tattccgctc gatcacggaa agcacgctgt cttccattac ctgcgcggac gcgcccggat
     5521 aagtggccct cagggtgatg gtcggggcgg cgacagacgg atattgcgaa acaggcaggc
     5581 ttttaatgcc gaaaataccc gccgcaataa tgaaaatcga aataacccac gcgaaaatgg
     5641 ggcggtcgat aaaaaattta gccatcgatg ccttccttat tccgcttcag aagcagtttt
     5701 ggcttcagat gccgtctgaa cgccggattg aggcgcggcg gcttggtttt cagacggcgc
     5761 ccattctttg ggcgttacct ttttcgcacc cgttataccg gcgatactga tgccttccac
     5821 aaccaccttg tccccgtcct tcagacccga cgtaacaatc caattcgtac cctgctgttg
     5881 cgcgaccgtt acctcgcggg gttccatacc gccttgggcg ttcacaatca tcacggtatc
     5941 tttcgcaccg cgcgttaccg cctgctgcgg cacgatgaat gcgttatcca ccgccacttg
     6001 gtccatcagc acgcgcacat acaggccggg catcaggata ttctgatcgt tcggtacggc
     6061 ggcgcgcagg gtaatctgac cggtcgattc gttgacggtc ggatcggcaa acagcaggcg
     6121 gcctttttca gggtaaactg tgccgtcgtc aaatttgatg ccgaccgcaa tcacaccatc
     6181 cgccgccagc agtttgcctt cggctatctg acggcgcaat ttcatcactt cggatgcaga
     6241 ctgggtaacg ttcacataca tcggattggt ttggcggatg gttgccagca cggtcgtatc
     6301 gcccgcattc aacagcgtac cttcggaaac tttggactga ccgataaagc cggaaatcgg
     6361 cgcggtaatg cgcgaacggt tcagattaat gccggcagat ttgattgccg cctgtgctgc
     6421 tttgacacct gcctcggcag aacgtttcgc cgttaccgca gcatcgtatt cctgccggct
     6481 gacggcttcg gcggcaacca aaggcttgta ccgcgccaaa tccgcatccg ctttggcaag
     6541 cgttgcctga gccgttgcca gttgcgcgcg tgcgctttcc agacctgctt cataagtgga
     6601 actgtcgatc tgatacagcg gctgtccggc acggacataa ctgccttctt ggaacaggcg
     6661 tttttggatg atgccgccga cttgggcgcg gacatcggcg gtacgcagcg attccaaacg
     6721 ccccggcaac tcgacggtca atgcgacggt ttgcggatgg acggttacga caccgacgac
     6781 gggagccggt gcttcccgac cagcaggctg cccgccctgc gccgcgtctc cgcctttacc
     6841 gcaagacgac agtaccaatg caacggcggc agccaacgcg gccgcacgca tcgccttaaa
     6901 agcataaaaa gccattattt atcctatctg tctggtttga tgtaaagggt tttgccaatc
     6961 aacaggcatt
//
LOCUS       DAXHKG010000104         6727 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.104, whole genome shotgun sequence.
ACCESSION   DAXHKG010000104 DAXHKG010000000
VERSION     DAXHKG010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.104"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            120..1025
                     /gene="glyQ"
                     /locus_tag="ACFMWP_001613"
     CDS             120..1025
                     /gene="glyQ"
                     /locus_tag="ACFMWP_001613"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HFC5892186.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAVEGASLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1102..1512
                     /locus_tag="ACFMWP_001614"
     CDS             1102..1512
                     /locus_tag="ACFMWP_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding protein YggL"
                     /protein_id="HFC5892187.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAA
                     DDAEAFGRFMDELIAYLEANDFEMAGGGDCGDFSCLFQKSAPRGLGETEKKAIISWLA
                     GREDVATLHATPLVDGFYGDDGWENYSETYKQAD"
     gene            1533..3596
                     /gene="glyS"
                     /locus_tag="ACFMWP_001615"
     CDS             1533..3596
                     /gene="glyS"
                     /locus_tag="ACFMWP_001615"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HFC5892188.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDVVNVSVLGLQSGNKTLGHRFLSNGEITIENADSYAAQMREQGKVVA
                     PFAERKAAIQTALERQARRLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTADPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3613..4659
                     /locus_tag="ACFMWP_001616"
     CDS             3613..4659
                     /locus_tag="ACFMWP_001616"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC5892189.1"
                     /translation="MPSEAFRRHRAYRENKLQSLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKRDSRIKILAQAQNSGLIPSLNIGLDELAKSG
                     MGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHG
                     KIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSK
                     LGRLAYYPEALVKYRLHANQVSSKYSIRQHEIAQGIQKTARNDFLQSMGFKTRFDSLE
                     YRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTPPAGAWLDFAADGRMRRLFTL
                     RQYFGILRRLLKNR"
     gene            4701..5528
                     /locus_tag="ACFMWP_001617"
     CDS             4701..5528
                     /locus_tag="ACFMWP_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC5892190.1"
                     /translation="MQNHVISLASAAERRAHIADTFGAHGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISR
                     KAMRFFLDRFAALPPEGLHPVDLMMFSDFFDREGMPVCQLDPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQWRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            5540..5635
                     /locus_tag="ACFMWP_001618"
                     /pseudo
     CDS             5540..5635
                     /locus_tag="ACFMWP_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
     gene            5677..6519
                     /locus_tag="ACFMWP_001619"
     CDS             5677..6519
                     /locus_tag="ACFMWP_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC5892191.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHDIPFQFFDALMPSEELNRM
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
BASE COUNT         1715 a         1795 c         1773 g         1444 t
ORIGIN      
        1 aatttaatcc actatatcat gtatgccgtg ttttcaaatc agtctgtctt tgagataaac
       61 ctatccaaac agcaatggaa acagtaaaat aaacccttta ttttatcgaa tcataagcca
      121 tgcttacctt ccaacaaatc atcttcaaac tgcaaacctt ctgggcagac aaaggctgca
      181 ccgtcatcca acccttcgac atggaagtcg gtgccggcac atcccatccc gccacctgcc
      241 tgcgcgcgct cggtcccgag ccttggtttg ccgcctacgt ccaacccagc cgccgcccta
      301 aagacggccg ctacggcgac aatcccaacc gcctgcaaca ctactatcaa ttccaagtcg
      361 ccctcaaacc cgcccccgcc aatatccaag acctctatct tgattctctg cgcgaattgg
      421 gcatcgaccc caaagtccac gacatccgtt ttgtcgaaga cgactgggaa aatccgactt
      481 tgggcgcgtg gggtttgggc tgggaagtct ggctcaacgg catggaagta acccagttta
      541 cctacttcca acaagtcggc ggcattgact gcacccccgt actcggcgaa atcacctacg
      601 gcatcgaacg cttggcgatg tacctgcaag gcgtggaaaa cgtctatgac ctcgtttggg
      661 caaaaacgct ggacggcaat accgtaacct acggcgacgt gtaccaccaa aacgaagtcg
      721 aacaatccac ctacaacttc gaatacagcg atgccgattg gctgctgcgc cagttcaacg
      781 actacgaagc gcaagccaaa cgcctgcttg ccgttgaagg agcaagcctt gcgctgcctg
      841 cctacgagct ggttctcaaa gcggggcata cgttcaacct cttggacgcg cgcggcgcga
      901 tttccgtaac tgagcgggca acttatattg gacgtattcg tgcattgagc cgcgccgtgg
      961 cgcaaaaata tgttgaaagc cgcgaaaaac tgggcttccc tttaatgaag gcaaatgctg
     1021 cctaaggggg cgacgatttt ttacgttcgg gcggcacgat aaggcagccg tccggaagcc
     1081 attatatttt ttaggaaaat catgcctgtc tatttccgca ccccaagcag gaaacgcctg
     1141 cacaaaatga accgccgcca gcataaaaag ctgcatttgg gcgagtttca aacattgatt
     1201 ttcggcgttc aaggcagttt gcaccaagct gcggacgatg ccgaagcgtt tggccgcttt
     1261 atggacgagc tgattgcgta tcttgaggca aacgactttg aaatggcggg cgggggcgat
     1321 tgcggcgatt tttcgtgcct gtttcaaaaa tccgcccccc gaggcttggg cgaaaccgag
     1381 aaaaaagcca ttatctcttg gctggcaggc cgcgaagatg tcgccacttt gcacgccacc
     1441 ccgctggttg acggttttta cggggatgac ggctgggaaa attacagcga aacctataaa
     1501 caggcagatt aaccaaattc aaagaaagcc gaatgatgac ccaaaccctt ttaatcgaac
     1561 tccttaccga agaactcccg cccaaagctc tgaataatct gggcaaccat tttgccgccg
     1621 ccgttgccga aggcttggaa aaagcgcaac tggttgacgg tgcagccgaa tttacggctt
     1681 atgcctcgcc gcgccgtttg gcggttcaag tcaaaaacgt caaagccgtt caggccgacc
     1741 aaaaaatcgt gaaaaaaggc cctgccgtgg cgaatgccat gaaagacggt gcgccgacca
     1801 aggctttgga aggtttcgca cgcggtgcgg gcgcgaaaat cgaagacttg accatcgtcc
     1861 acgacggcaa gcaggacgtg tacgcctacg aatacgtcca aaccggcaaa ccgttgggcg
     1921 agcttttgga agacattatc aatgccgcag tgaaaaaatt gccgattcca aaagtaatgc
     1981 gttggggcag cagcacattt accttcgtgc gccccgtcca cgggctgatt gtgctgcacg
     2041 gcggcgatgt cgtgaacgtc agcgttttgg gtctgcaaag cggcaacaaa accttgggac
     2101 accgcttcct ctccaacggc gaaatcacca ttgaaaacgc cgacagctac gccgcacaaa
     2161 tgcgcgaaca aggcaaagtc gtcgctccgt ttgccgagcg caaagccgcg attcagacgg
     2221 cattggaaag gcaggcgcgc cgtctgaacg ccgccgtcgc cgccgatgaa gccttgttgg
     2281 acgaagtaac cgcgctggtc gaatggcctg tggtattgga agccggtttt gaggaacact
     2341 tcctcgccgt gcctcaagaa tgcttgattt tgacgatgca gcaaaaccaa aaatacttcc
     2401 cgctgctcga ccaaaacggc aagctgatga accgcttcct gctggtctcc aacctgcaaa
     2461 ccgcagaccc gtcgcacatc atccaaggca acgaacgcgt attgcgcgcg cgcctgtctg
     2521 atgccgagtt cttctacaag caagaccaaa aagcgactct ggaaagccgc ctgcccaagc
     2581 tggcaaacgt ggtgtaccac aacaaaatcg gttcgcaggc cgaacgcatc gaacgcctgc
     2641 aaagcattgc cgcccacatc gctaaagcgt tgggcgcaga tgctgccgca gccgaacgcg
     2701 ccgcacgttt ggcaaaagcc gacttggtga ccgaaatggt cggcgagttc cctgaactgc
     2761 aaggcacgat gggcaaatac tatgcccgct tggacggcga aaccgaagaa atcgccgaag
     2821 ccatcgagca gcactatcag ccgcgttttg ccggcgacaa gctgcccgaa agcaaaattg
     2881 ccgccgccgt ggcactggcg gacaagctgg aaaccctggt cggcatttgg ggcatcggtc
     2941 tgattccgac cggcgacaaa gacccctacg ccctgcgccg cgccgccttg ggtattttgc
     3001 ggatgctgat gcagtacggt ttggacgtga acgaactgat tcagacggca ttcgacagct
     3061 tccccaaagg tttgctcaac gaaaaaacgc cgtctgaaac cgccgacttt atgcaggcgc
     3121 gccttgccgt gttgctgcaa aacgattatc cgcaagacat cgttgccgcc gtactcgcca
     3181 aacagccgcg ccgtttggac gatttgaccg ccaaactgca ggccgttgcc gcgttcaaac
     3241 aactgcccga agccgccgcg ctcgccgccg ccaacaaacg cgtgcaaaac ctgctgaaaa
     3301 aagccgatgc cgagttgggc gcggttaacg aaagcctgtt gcaacaggac gaagaaaaag
     3361 ccctttttgc tgctgcgcaa ggcttgcagc cgaaaatcgc cgccgccgtc gccgaaggca
     3421 atttccaaac cgccttgtcc gaactggctt ccgtcaagcc gcaagtcgat gccttctttg
     3481 acggcgtgat ggtgatggct gaagatgccg ccgtgaaaca aaaccgcctg aacctgctga
     3541 accgcttggc agagcagatg aacgcggtag ccgacatcgc gcttttgggc gagtaaccgt
     3601 tgtacagtcc aaatgccgtc tgaagccttc agacggcatc gtgcctatcg ggagaataaa
     3661 ttgcagtctt tagtcagcgt attgatttgc gcctacaacg tagaaaaata tttcgcccaa
     3721 tcattagccg ccgtcgtgaa tcagacttgg cgcaacttgg agattttgat tgtcgatgac
     3781 ggctcgacag acggtacgct tgccattgcc aaggattttc aaaagcggga cagccgtatc
     3841 aaaatccttg cacaagctca aaattccggc ctgattccct ctttaaacat cgggctggac
     3901 gaattggcaa agtcaggaat gggggaatat attgcacgca ccgatgccga cgatattgcc
     3961 gcccccgact ggattgagaa aatcgtgggc gagatggaaa aagaccgcag catcatcgcg
     4021 atgggcgcgt ggctggaagt tttgtcggaa gaaaaggacg gcaaccggct ggcgcggcat
     4081 cacaggcacg gcaaaatttg gaaaaagccg acccgacacg aagatattgc cgactttttc
     4141 cctttcggca accccataca caacaacacg atgattatga ggcgcagcgt cattgacggc
     4201 ggtttgcgtt acaacaccga gcgggattgg gcggaagatt accaattttg gtacgatgtc
     4261 agcaaattgg gcaggctggc ttattatccc gaagccttgg tcaaataccg ccttcacgcc
     4321 aatcaggttt catccaaata cagcatccgc caacacgaaa tcgcgcaagg catccaaaaa
     4381 accgccagaa acgatttttt gcagtctatg ggttttaaaa cccggttcga cagccttgaa
     4441 taccgccaaa taaaagcagt agcgtatgaa ttgctggaga aacatttgcc ggaagaagat
     4501 tttgaacgcg cccgccggtt tttgtaccaa tgcttcaaac ggacggacac gccgcccgcc
     4561 ggcgcgtggc tggattttgc ggcagacggc aggatgcggc ggctgtttac cttgaggcaa
     4621 tacttcggca ttttgcgccg attgctgaaa aaccgttgaa aaacgccgtt ttatccaaca
     4681 gacaaaaaac aggataaatt atgcaaaacc acgttatcag cttggcttcc gccgcagaac
     4741 gcagggcgca cattgccgat accttcggcg cgcacggcat cccgtttcag tttttcgacg
     4801 cactgatgcc gtctgaaagg ctggaacagg caatggcgga actcgtaccc ggcttgtcgg
     4861 cgcatcctta tttgagcgga gtggaaaaag cctgctttat gagccacgcc gtattgtgga
     4921 aacaggcatt ggacgaaggt ctgccgtata tcgccgtatt tgaagatgat gtcttgctcg
     4981 gcgaaggcgc ggagaaattc cttgccgaag acgcttggct gcaagaacgc tttgaccccg
     5041 attccgcctt tatcgtccgc ttggaaacga tgtttatgca cgtcctgacc tcgccctccg
     5101 gcgtggcgga ctactgcggg cgcgccttcc cgctgttgga aagcgaacac tgggggacgg
     5161 cgggctatat catttcccga aaagcgatgc ggtttttcct ggacaggttt gccgccctgc
     5221 cgcccgaagg gctgcacccc gtcgatctga tgatgttcag cgattttttc gacagggaag
     5281 gaatgccggt ttgccagctc gatcccgcct tgtgcgccca agagctgcat tatgccaagt
     5341 ttcacgacca aaacagcgca ttgggcagcc tgatcgaaca cgaccgcctc ctgaaccgca
     5401 aacagcaatg gcgcgattcc cccgccaaca cattcaaacg ccgcctgatc cgcgccttga
     5461 ccaaaatcag cagggaaagg gaaaaacgcc ggcaaaggcg cgaacagttc attgtgcctt
     5521 tccaataaaa ggaggagaga tggacatcgt atttgcagca gacggcagga tgcggcggct
     5581 gtttaccttg aggcaatact tcggcatttt gcgccgattg ctgaaaaacc gttgaaaaac
     5641 gccgctttat ccaacagaca aaaaacagga taaattatgc aaaaccatgt tatcagctta
     5701 gcttccgccg cagaacgcag ggcgcacatt gccgatacct tcggcaggca cgacattccg
     5761 tttcagtttt tcgacgcact gatgccgtct gaagaactga atcggatgat ggcggaattg
     5821 gtgccgggat tggcaaaaca gcacctgttg agcgaagtgg aaaaagcctg ctttatgagc
     5881 cacgccgtat tgtggaaaca ggcattggat gaaggtctgc cctatgttgc cgtatttgag
     5941 gatgatgtcc tgcttggcaa agacgcagaa aagttccttg ccgaagatac ttggttggaa
     6001 gagcgttttg ataaggattc tgcctttatc gttcgtttgg aaacgatgtt tgcgaaagtt
     6061 attgtcagac cggataaagt cctgaattat gagaaccggt catttccttt gctggagagc
     6121 gaacattggg ggacggctgg ctatatcatt tcgcgtgagg cgatgcggtt tttcttggaa
     6181 aggtttgccg ttttgccggc agagtggatt aaagcggtag attggatgat gtttacttat
     6241 ttctttgata aggaggggat gcctgtttat caggttaatc ccgccttatg tacccaagaa
     6301 ttgcattatg ccaagttcct cagtaaaaac agtatgttgg gtagcgattt ggaaaaagat
     6361 agggaacaag aaagaagaca ccgccgttcg ttgaaggtga tgtttgactt gaagcgtgct
     6421 ttgggtaaat tcggtaggga aaagaagaaa agaatggagc gtcaaaggca ggcggagctt
     6481 gagaaagctt acggcaggcg ggtcatatcg ttcaaatagt ttgtgtaaaa tatagcggat
     6541 taaaattaga aatggataca ctgtcattcc cgcgcaggcg ggaatctagt ccgttgagtt
     6601 tcagtcattt ccgataaatc accgcaacgt taaatttcta gattcccgcc tgcgcgggaa
     6661 tggcggtggt gggatttctg tttttccgac aaattcctaa aacttaaagt tccgttattc
     6721 ccgcgaa
//
LOCUS       DAXHKG010000105         6673 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.105, whole genome shotgun sequence.
ACCESSION   DAXHKG010000105 DAXHKG010000000
VERSION     DAXHKG010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6673
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.105"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            28..1383
                     /locus_tag="ACFMWP_001620"
     CDS             28..1383
                     /locus_tag="ACFMWP_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HFC5892192.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLFYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKSY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMMGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1387..2424
                     /locus_tag="ACFMWP_001621"
     CDS             1387..2424
                     /locus_tag="ACFMWP_001621"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HFC5892193.1"
                     /translation="MSDTPATPATPATPATRDFGLIDGRAVTGYVLSNRRGTRVCVLD
                     LGGIVQEFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRT
                     YRVEANEGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYR
                     LDEDNRLTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVS
                     TVSDDLEVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRI
                     SIYSDRNGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTRE
                     ATIAYGIESLS"
     gene            2658..4916
                     /locus_tag="ACFMWP_001622"
     CDS             2658..4916
                     /locus_tag="ACFMWP_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HFC5892194.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELALIRWEAVSIDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDDRSYIATQTVTNPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFEAEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVRAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
     gene            4929..5594
                     /gene="pgmB"
                     /locus_tag="ACFMWP_001623"
     CDS             4929..5594
                     /gene="pgmB"
                     /locus_tag="ACFMWP_001623"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HFC5892195.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGISIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVSEAEFAELTRRKNDNYVEMIQAVKPEDVYPGILPLLET
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKASGALPIGVGKAEDLGSDIPLVSGTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(5804..>6673)
                     /locus_tag="ACFMWP_001624"
     CDS             complement(5804..>6673)
                     /locus_tag="ACFMWP_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC5892196.1"
                     /translation="RDHRGRPACPLLSMFKAILLGQWHSLSDPELEHSLITRIDFNLF
                     CRFDELIIPDYSTLCRYRNWLAQDDTLSELLKLINCQLTEKGLKIEKASAAVVDATII
                     QTAGSKQRQAIEVDEEGQISGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEK
                     LHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSAENRQHLEEHQLQDGIMRKACRN
                     RPLTETQTKRNRYLSKTRYVVEQSFGTLHRKFRYARSTYFGLIKVSAQSHLKAMCLNL
                     LKAANRLSAPAAA"
BASE COUNT         1470 a         1892 c         1821 g         1490 t
ORIGIN      
        1 ttttcaaatc aaaaaaggat ttaccttatg tcggaatata cgcctcaaac agcaaaacaa
       61 ggtttgcccg cgctggcaaa aagcacgatt tggatgctca gtttcggctt tctcggcgtt
      121 cagacggcct ttaccctgca aagctcgcaa atgagccgca tttttcaaac gctaggcgca
      181 gacccgcaca atttgggctg gtttttcatc ctgccgccgc tggcggggat gctggtgcag
      241 ccgattgtcg gccattactc cgaccgcact tggaagccgc gtttaggcgg ccgccgtctg
      301 ccgtatctgt tttatggcac gctgattgcg gttattgtga tgattttgat gccgaactcg
      361 ggcagcttcg gtttcggcta tgcgtcgctg gcggctttgt cgttcggcgc gctgatgatt
      421 gcgctgttgg acgtgtcgtc gaatatggcg atgcagccgt ttaagatgat ggtcggcgat
      481 atggtcaacg aggagcagaa aagctacgcc tacgggattc aaagtttctt agcgaatacg
      541 ggcgcggtcg tggcggcgat tctgccgttt gtgttcgcgt atatcggttt ggcgaacacc
      601 gccgagaaag gcgttgtgcc acaaaccgtg gtcgtagcat tctatgtggg cgcggcatta
      661 ctgattatta ccagtgcgtt cacaatcttc aaagtcaaag aatacgaccc ggaaacctat
      721 gcccgttacc acggcatcga tgtcgccgcg aatcaggaaa aagccaactg gttcgaactt
      781 ttaaaaacgg cacctaaagc gttttggacg gttactctgg tacagttttt ctgctggttc
      841 gccttccaat atatgtggac ttactcggca ggcgcgattg cggaaaacgt ctggcacacc
      901 actgatgcgt cttccgtagg ttatcaggag gcgggcaact ggtacggcgt tttggcggcg
      961 gtgcagtcgg ttgcggcggt gatttgttcg tttgtattgg cgaaagtgcc gaataaatac
     1021 cataaggcgg gttatttcgg ctgtttggct ttgggcgcgc tcggcttttt ctccgttttc
     1081 ttcatcggca accaatacgc gctggtgttg tcttatacct taatcggcat cgcttgggcg
     1141 ggcattatca cttatccgct gacgattgtg accaacgcct tgtcgggcaa gcatatgggc
     1201 acttacttgg gcctgtttaa cggctctatc tgtatgccgc aaatcgtcgc ttcgctgttg
     1261 agtttcgtgc ttttcccgat gatgggcggc ttgcaggcca ctatgttctt ggtagggggc
     1321 gtcgtcctgc tgctgggcgc gttttccgtg ttcctgatta aagaaacaca cggcggggtt
     1381 tgagcgatga gcgatacccc cgctaccccc gctacccccg ctacccccgc tacccgcgat
     1441 ttcggcctga tcgacgggcg tgccgtaacc ggctatgtgc tgtccaatcg gcgtggtacg
     1501 cgtgtctgcg tgctggactt gggcgggatt gtgcaggaat tttccgtttt ggcagacggc
     1561 gtgcgcgaaa acctcgtggt gtcgttcgac gatgcggctt cctatgcgga caatccgttt
     1621 cagattaaca agcagatagg gcgcgtggcc ggacgcatcc gcggtgcggc gttcgacatc
     1681 aacggcagga cttaccgcgt ggaggccaac gaaggcagga acgcgctgca cggcggttcg
     1741 cacgggctgg ccgttacccg tttcaacgcg gtggcggcag acggccgttc ggtggtgctg
     1801 cgcagccgcc tgcaacagtc ggccgacggt tatcccaacg atttggattt ggatatttcc
     1861 taccgcttgg acgaggacaa ccggcttacc gttagctatc gcgccaccgc gctcggcgac
     1921 acggtgttcg acccgacgct gcacatttac tggcggctgg acgcgggcct gcacgatgcg
     1981 gttctgcata ttccgcaggg cggacatatt ccggccgatg ccgaaaaact gcccgtctca
     2041 acggtttcag acgacctcga agtatttgat ttcagccggc ccaagccgct ggatgccgcc
     2101 gttgccgccc tgcgccgcga aacgggtcgg gccggttttg acgacgctta ccgcgtgccg
     2161 tccgatatag gccgtcccgc cgctgtgttg caagccggac gccgccgtcg tatcagcata
     2221 tacagcgacc gcaacggctt ggtcatcttt accgccgccc cgcaggattt cgcgcggcac
     2281 gatgcgggcg tttacgacgc gctggcgacc gaggcgcaga cgctgcccga cagcctgaat
     2341 tggcccgagt tcggcaatat tcgtctgaac aagggtgata ccagggaggc gacgattgct
     2401 tacggcatcg aatccctttc ttaggagctt cctaacaccg gttgcagacg gcctttttat
     2461 agtggattaa caaaaaccgg tacggcgttg cctcggctta gctcaaagag aacgattctc
     2521 taaggtgctg aagcaccaag tgaatcggtt ccgtactatt tgtactgttt gcggcttcgt
     2581 cgccttgtcc tgatttttgt taatccacta taagatttca ccattccctc aaatcaatcc
     2641 aaacaggagc ttcataaatg tacacaagaa ttatggaaat cagcccttgg acgctgcgtt
     2701 cggcaaagct ggaaaaagaa cacaaacggc tgcaagagag cctgaccagt ttgggcaacg
     2761 gctatatggg tatgcgcggc agctttgagg aaacctactc cgccgacagc cacttgggca
     2821 cctacatcgc cggcgtgtgg ttccccgaca aaacccgcgt cggctggtgg aaaaacggct
     2881 atcccaaata tttcggcaaa gccatcaacg cgctcaattt cagcaaagtc aaaatctttg
     2941 tcgatggtca agaggtggac ttggcgaaaa acgatgttgc cggcttctcc gtcgaactcg
     3001 atatgcagca cggcgtgttg cgccgctcgt tcaccgtatt cggcgtgcgt ttcgatgtgt
     3061 gcaaattcct gtccgtcgca caaaaagagc tggctctcat ccgctgggaa gccgtatcta
     3121 tcgacggcaa aacccaccaa gtccgcatcg attccatcat cgatgccgac gtgaaaaacg
     3181 aagattccaa ctacgaagaa aaattctggc aagtattgga caaaggcgtt tcagacgacc
     3241 gctcctacat tgccacccaa accgtcacca atcccttcgg cgtggaacaa tttatcgtca
     3301 acgccgagca aactttcgcc ggcagcttca aagccctcgg cggcagccaa accgactggc
     3361 aggtctccaa ttctttcgag gccgaagtcg gcggcacgcc caaaaccttt gaaaaacggg
     3421 ttattgttac caccagccgc gattatcagg gcttggaagc agtgaaagcc gcaggccgtg
     3481 ccttgtcgga aaaagtcgca ggcgttgcgt ttgaaacctt gctggacgcg cacaaagcag
     3541 gctggctgca ccgttgggaa atcgccgacg tggtcatcga aggcagcgac gaagcgcagc
     3601 aaggcatccg tttcaatctg ttccaactgt tctccaccta ctacggcgaa gatgcgcgcc
     3661 tgaacatcgg ccccaaaggc tttaccggcg aaaaatacgg cggcgcgacc tattgggata
     3721 ccgaagccta tgccgtaccg ctctacctcg cactggcgga acccgaagtt acccgcaacc
     3781 tgctgcaata ccgccgcaac caactgccgc aggcgcagca caacgcgcgc gaacagggct
     3841 tggcgggcgc actctatccg atggtaacgt ttacgggtat cgagtgccac aacgaatggg
     3901 aaatcacctt cgaggaaatc caccgcaacg gcgcgattcc ttacgccatc tacaactaca
     3961 ccaactacac cggcgacgag ggctatcttg ccaaagaagg cttggaagtc ttggtcgaag
     4021 tgtcccgctt ctgggcggac cgcgtccact tctccaaacg caacggcaaa tacatgattc
     4081 acggcgtaac cggcccgaac gaatacgaaa acaacatcaa caacaactgg tacaccaaca
     4141 ccctcgccgc atgggtattg gactacaccc gcgaagcctt ggcgaaatac ccgcgtccgg
     4201 atttgaacgt gcgtgccgcc gagttggaaa aatgggcgga catcagcgcg aatatgtacc
     4261 gtccgcatga cgaagaactc ggcgtattcg tgcaacacga cggcttcctc gacaaagaca
     4321 tccgccccgt gtccgcgctt tcgcccgacg atttgccgct caaccagaaa tggtcgtggg
     4381 acaaaatcct gcgttcgccc tttatcaaac aggcggacgt attgcaaggc atctatttct
     4441 tcggcgaccg tttcaatatc gacgaaaaac gccgcaattt cgacttctac gaaccgatga
     4501 ccgtgcacga aagctcgttg tcgccgtgta tccactctat tctcgccgcc gaactgggca
     4561 aagaagaaaa agccgtggaa atgtaccggc gcaccgcacg cctggacttg gacaactaca
     4621 acaacgacac cgaagacggc ctgcacatta cttctatgac cggctcgtgg ctcgccatcg
     4681 tccaaggttt cgcccaaatg aaaacttggg gcggtaaact cagcttcgca ccgttcctgc
     4741 cgagcgcatg gacaggctac gccttccata tcaactaccg aggccgtctg attaaagtcg
     4801 ccgtcggcaa agaaaacgtc gtcttcaccc tgctcaaagg cgagccgctc gatttgcagg
     4861 tgtacggcaa agacatcaca ctcaacggca gccataccgc cgcgttggaa aaataaggag
     4921 ggcgcaaaat gacgtttacc gcagtgctct tcgatctcga cggcgtcatc accgacaccg
     4981 ccgaatacca ctaccgcgcg tggaaaaaac tcgccgaaga actgggcatc agcatcgacc
     5041 gcaagtttaa cgagcagctc aaaggcgtgt cgcgcgacga ttcgctcaaa cgcatcctcg
     5101 cgcacggcgg caaaaccgtc agcgaagccg agttcgccga actgacccgc cgtaaaaacg
     5161 acaactacgt cgagatgatt caggcagtca aacccgaaga cgtgtatccc ggcattttgc
     5221 ccctgctgga aacattgaaa gcaaacggca aaaaaatcgc cctcgcgtcc gccagtaaaa
     5281 acggcccgtt cctgctcgaa cgcatggggc tgacccactt cttcgacacc gtcgccgacc
     5341 ctgccgccgt cgcgcattcc aaacccgccc ccgacatctt cctcgccgcc gccgagggcg
     5401 tgggcgcgga catccgccgc tgcatcggca ttgaagacgc tgccgcaggt gtcgccgcca
     5461 tcaaagcctc cggcgcctta cccatcggtg tgggcaaagc cgaagacttg ggtagcgaca
     5521 tcccgctggt gtccggcacc gccgagctga cctacgccta cctgcaaaac gtgtgggcac
     5581 agtcgggcag gtaaaacgcg tcagataaag tgttaaggaa gtaaaaggcc gtctgaacag
     5641 tgtttcagac ggcctgagac ctttgcaaaa ttcctgtccc tcccgacagc cgaaacccaa
     5701 acacaggatt tcggctgttt tcgtaccaaa tacctcctaa ttttacccaa atatcccctt
     5761 aatcctgccc ggatacccga taatcaggca tccgggctgc cttttaggcg gcagcgggcg
     5821 cacttaacct gttggccgct ttcaacaggt tcaaacacat cgctttcagg tggctttgcg
     5881 cactcacttt aatcagtccg aaataggttg accgcgcata gcggaattta cggtgcagcg
     5941 taccgaagct ctgttcgacc acataacggg tcttcgacaa ataccggttg cgtttggttt
     6001 gcgtttccgt cagcggacgg ttgcggcagg ctttgcgcat aatgccgtcc tgcaactgat
     6061 gttcttccag atgttgccgg ttttccgcac tgtcatagcc tttgtcggca tagacggtcg
     6121 tacctttggg cagtccttcc aacaacggcg acaggtgttt gcactcatgg gcattggcgg
     6181 gagtaatgtg cagtttctcg atatagcctt ctgcatcggt acgggtatgt tgtttgtaac
     6241 cgagtttgta gaggccgttt ttctttatcc aacgggcatc gctgtcctta ctcggtgtgg
     6301 tttgaccgct gatttgtcct tcttcgtcaa cttctatggc ctgacgctgt ttgctgccgg
     6361 cggtctggat aatggtggca tcaacgacgg cggcggatgc tttctctatt tttaggcctt
     6421 tttcggtcag ttggcagtta atcagtttga gtaattcgga cagggtgtcg tcttgcgcca
     6481 gccagttgcg gtagcggcat aaggtactgt aatcggggat gatcagttcg tcgaaacggc
     6541 aaaacaggtt gaaatcgatg cgggtgatga ggctgtgttc gagttcggga tcggagaggc
     6601 tgtgccattg tccgagcagg atggctttga acatggacaa caggggacag gcgggacgac
     6661 cgcggtggtc tct
//
LOCUS       DAXHKG010000106         6434 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.106, whole genome shotgun sequence.
ACCESSION   DAXHKG010000106 DAXHKG010000000
VERSION     DAXHKG010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6434
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.106"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            109..1650
                     /locus_tag="ACFMWP_001625"
     CDS             109..1650
                     /locus_tag="ACFMWP_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC5892197.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAAMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGWQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRACSDKAVSPVMPSEPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLAAFALGIFLLLDGGEGGK
                     RTETL"
     gene            1679..2278
                     /locus_tag="ACFMWP_001626"
     CDS             1679..2278
                     /locus_tag="ACFMWP_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HFC5892198.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            2275..2880
                     /gene="nadD"
                     /locus_tag="ACFMWP_001627"
     CDS             2275..2880
                     /gene="nadD"
                     /locus_tag="ACFMWP_001627"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HFC5892199.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRNLASQGVSDGIPPAAARYIREHGLYEK"
     gene            2939..3325
                     /gene="rsfS"
                     /locus_tag="ACFMWP_001628"
     CDS             2939..3325
                     /gene="rsfS"
                     /locus_tag="ACFMWP_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HFC5892200.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            3379..3849
                     /gene="rlmH"
                     /locus_tag="ACFMWP_001629"
     CDS             3379..3849
                     /gene="rlmH"
                     /locus_tag="ACFMWP_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HFC5892201.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYVLKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKTWQQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            3924..4190
                     /locus_tag="ACFMWP_001630"
     CDS             3924..4190
                     /locus_tag="ACFMWP_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HFC5892202.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            4347..5030
                     /locus_tag="ACFMWP_001631"
     CDS             4347..5030
                     /locus_tag="ACFMWP_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HFC5892203.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            5154..5666
                     /gene="coaD"
                     /locus_tag="ACFMWP_001632"
     CDS             5154..5666
                     /gene="coaD"
                     /locus_tag="ACFMWP_001632"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HFC5892204.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            5698..6351
                     /locus_tag="ACFMWP_001633"
     CDS             5698..6351
                     /locus_tag="ACFMWP_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HFC5892205.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1402 a         1707 c         1859 g         1466 t
ORIGIN      
        1 ttcagacggc gggaggaagg cggatacggt atgtagtcgg attgaaatat acggtatgtg
       61 gggcttttgg gtacaatcgc aacatcagtg tttcaagtgg ggaaggcgat ggatggacgg
      121 cgttgggcgg tatggggtgc ttttgccctg ctgccttcgg cttttttggc ggcaatggtc
      181 gttgcgcctt tgtgggcggt ggcggcgtat gacggtttgg cgtggcgcgc ggtgctgtcg
      241 gatgcctata tgctcaaacg tttggcgtgg acggtatttc aggcagcggc aacctgtgtg
      301 ctggtgctgc ctttgggcgt gcctgtcgcg tgggtgctgg cgcggctggc gtttccgggg
      361 cgggctttgg tgctgcgcct gctgatgctg ccgtttgtga tgcccacgtt ggtggcgggc
      421 gtgggcgtgc tggctctgtt cggggcggac ggtctgttgt ggcgcggctg gcaggatacg
      481 ccgtatctgt tgttgtacgg caatgtgttt tttaacctgc ccgtgctggt cagggcggcg
      541 tatcaggggt ttgtgcaagt gcctgcggca cggcttcaga cggcacggac gttgggcgcg
      601 ggggcgtggc ggcggttttg ggacattgaa atgcccgttt tgcgcccgtg gcttgccggc
      661 ggcgtgtgcc ttgtcttttt gtattgtttt tccgggttcg ggctggcatt gctgctgggc
      721 ggcagccgtt atgccacagt cgaagtggaa atttaccagt tggtcatgtt cgaactcgat
      781 atggcggttg cttcggtgct ggtgtggctg gtgttggggg taacggcggc ggcagggttg
      841 ctgtatgcgt ggttcggcag acgcgcgtgt tcggataagg cagtttctcc tgtgatgccg
      901 tctgaaccgc agtcggtcgg ggaatatgtg ctgctggcgt ttgcggcggc ggtgttgtct
      961 gtgtgctgcc tgtttccttt gttggcaatt gttgtgaaag cgtggtcggc cggcgaatcg
     1021 tggcgtgtgt taatggaaag tgaaacgtgg caggcggtgt ggaatacttt gcgcttctcg
     1081 gcggcggcgg tgtttgcggc ggcggttttg ggtgtggtgt atgcggcggc ggcgcggcgg
     1141 tcggcgtgga tgcgcgggct gatgtttttg ccgtttatgg tgtcgccggt ttgtgtttcg
     1201 gcgggcgtgc tgctgcttta tccgcagtgg acggcttcgt tgccgttgct gctggcgatg
     1261 tatgcgctgc tggcgtatcc gtttgtggca aaagatgttt tgtcggcttg ggacgcactg
     1321 ccgccggatt acggcagggc ggcggcgggt ttgggcgcaa acggctttca gacggcatgc
     1381 cgcatcacgt tccccctctt gaaaccagcg ttgcggcgtg gtctgacttt ggcggcggca
     1441 acctgcgtgg gcgaatttgc ggcaaccttg ttcctgtcgc gtcccgagtg gcagacgctg
     1501 acgactttga tttatgccta tttgggacgc gcgggtgagg ataattacgc gcgggcgatg
     1561 gtgctgacat tgctgttggc ggcgttcgcg ctgggtattt tcctgctgtt ggacggcggc
     1621 gaaggcggaa aacggacgga aacgttataa tgcgaaccct ttttcagagg acggcaaaat
     1681 gagcgagttg gataacatcc ttgcccataa tcggcagttt gtcgagtcgg gcgaatatga
     1741 aaaatacttt accgacaaat accccgaacg cgggctggca gttttgtcct gtatggatgc
     1801 gcggattatc gggctgctgc ccgacgcgtt gggtttgaaa aacggcgatg ccaagctgat
     1861 taaaaatgcc ggcgcgctgg ttacgcaccc gtggggttcg gtgatgcgga gccttttggt
     1921 tgccgtgttt gaactgaagg tcagagagat tatggtcatc gcccatcacg attgcggtat
     1981 gcaggggctg aatgccgaag aattcctcgg gcgcgtccgg gaaagccgga ttcccgaaga
     2041 ccgtatcgaa accctgcgtt atgccggtat cgacctcgac ggctggctga ccggtttcga
     2101 caacgtcgaa gacagcgtgc gccacacggt ggaccttatc cgtaaccatc cgctgatgcc
     2161 gcgccatatc gccgttcacg gattggtcat ccatcccgtt accggcaaac tgacgctggt
     2221 tgtggacggc agtgtttcag acggcatgga cttatcggaa ggaatggaaa catcatgaag
     2281 aaaatcggac tgttcggcgg cactttcgac ccgatacaca acgggcatct ccacatcgcc
     2341 cgcgcctttg ccgacgaaat cggcttggac gcggttgttt tcctgccggc aggcggcccg
     2401 tatcacaaag acgcagcctc cgcttccgcc gccgaccgcc ttgccatggt cgaactggcg
     2461 acggcagaag acgcgcgttt tgccgtcagc gattgcgaca tcgtccgaga aggtgcaacc
     2521 tatacttttg ataccgtcca aatcttccgc cagcagttcc catccgcgca actctggtgg
     2581 ctgatgggca gcgacagcct gatgaagctg cacacatgga aaaaatggca gatgctcgtg
     2641 cgcgaaacca atatcgccgt cgccatgagg cagggcgaca gcctgcacca aaccccgcgc
     2701 gaactgcacg cgtggctggg caagtccctt caggacggca gcgtccgcat cttgtccgcc
     2761 ccgatgcata atgtgtcgtc aacggaaatc cgccgcaacc ttgccagcca aggcgtttca
     2821 gacggcatcc cgcctgccgc cgcacgctac atccgcgaac acggtttgta tgaaaaataa
     2881 agtcaaatca gtaagaaacg gctataatgc cgtctgaaaa catcccgtta ggaaaataat
     2941 gaacgaacaa gaactgcaag acctgcaaaa aatggtcggg gtcgccgtca acgccctcga
     3001 agacatcaaa gccaaagaca tttccgttct cgaaacgcaa gacaaaactt cgctgtttgc
     3061 cagaatgatt atcgccagcg gcgacagtac gcgccaagtc aaagcactgg ccaacaacgt
     3121 tgccgtcgat ttgaaagaag ccggttttga aatcctcagc accgaaggcg acagcggcga
     3181 atggacgttg gttgatgcag gagacctcgt cgtccacgtt atgctccccg ccgtgcgcga
     3241 cttctatgat atcgacaccc tttggggcgg cgagaaaccg agtttccacg ccggaatgca
     3301 gaagccgtgg cacgcggcag actgattccc gatgccgtct gaatgttcag acggcatttt
     3361 cctgtaaggg agaaagcatt gaacatcacc gttttggcag tcggcaccaa aatgccgcgc
     3421 tgggttgatg aggccgtcgc cgaatacgcc aaacgcttcg gacgcgacgt cgcctacgta
     3481 ctcaaagaaa tcaaacccga aaaacgcggc gcgggcgtga atgccgccca aggaatggcg
     3541 gcggaagaaa aacgcatcct cgaagccata ccgcaaggcg cgttcctcgt cgtccttgac
     3601 gaacgcggca aagcaccgac ctccgtcgag ctggcggaac acctcaaaac ttggcagcaa
     3661 aacggcgaac acgtctgctt cgtcatcggc ggcgcggacg gcatgaccga ccgcctcaaa
     3721 cagcaggccc gcatgatgat gcgcctgtcc agcctgaccc tgccgcacgg gatggtgcgc
     3781 gtccttctga ccgaacaact ctaccgcgcc gcctccatcc tgcacaacca cccctaccat
     3841 cgggaataag aaggcttttg tccgcactcc caatcggtta aaatcccccc gttatttctg
     3901 aacacacagc aaaggaatcc gctatggcac gcatggtatt ctgcgtcaag ctcaacaaag
     3961 aagccgaagg catgaaattt ccgccgcttc ccaacgaatt gggcaagcgc atttttgaaa
     4021 acgtatcgca agaagcgtgg gcggcgtgga cgcgccacca aacgatgctg attaacgaaa
     4081 accgtttaag cctcgccgat ccgcgcgcgc gcgaatacct ggctcagcag atggagcagt
     4141 atttcttcgg cgacggcgcg gatgccgttc agggatacgt tccgcaataa cggttttccg
     4201 ttttgaacac aggctgtccg aaactgcttc agacggcctt taaaatacgc cggacaactt
     4261 tatcttcacg caaccggaca aattttgaca ttgggcaatg ttaaaatccc ccattattcc
     4321 caaccgcgct ttcaggagca gatgatatgc aacacgacgt ttacgactac accgcgcata
     4381 cggtttctaa aaacaccgtc ctgcagaaaa cctaccgcct gctcggattt tcattcattc
     4441 cggcagccgc aggcgcggca cttgccgcca atgccggttt caatttttac gccgccttcg
     4501 gttcgcgctg gatagggttt gccgtcgtgt tggcgttttt ctacggtatg atccacttca
     4561 tcgagaaaaa ccgttacagc aataccggcg ttaccctgct gatggtattc acattcggta
     4621 tgggcgtatt gatcggcccc gtgctgcaat acgcgctcca tattgccgac ggtgcgaaaa
     4681 tcgtcggcat tgccgccgcg atgaccgccg ccgtcttttt aacgatgtcc gccttggcgc
     4741 gccgaacccg gctcgatatg aacgcgctcg gacgcttcct gaccgtaggt gcggtcattc
     4801 tgatggtcgc cgtggttgcc aatctgtttt tgggtattcc cgcactcgcc ctgaccattt
     4861 ccgccggttt tgtcttgttc agttccttaa tgattatgtg gcaggtacgc accgtcatcg
     4921 acggcggcga agacagccac atcagcgcgg cactgacact gtttatctcg ctttacaaca
     4981 tcttcagcag cctgctgaac atcctgttgt ctttaaacgg cgaggattga tgccggtaaa
     5041 acgccgtccg gctatgccgt ctgaaaatgc ttcagacggc attttacttt gggcatacaa
     5101 tacggatgca cacgcaccaa cacacagccg gctatgaggc cgggaggaat caaatgttac
     5161 cgaatacacc gcgccgcgcc gtttatgccg gcagtttcga tccgcccaca ttggggcatc
     5221 tgtggatgat acggcaggcg caatctatgt ttgacgaact catcgtcgcc atcggcatta
     5281 accccgacaa acgcagcacc tataccgtcg ctgaaaggca ggatatgttg tgcgatatta
     5341 ctaaaatgtt tcccaacgtc agaaccgatg tatttgaaaa ccgatttctg gtgcattatg
     5401 cccgtgaggt agatgcagga ttcatcgtgc gcggcatccg ttctgcttcg gattacgaat
     5461 acgaacgttc catgcgccac atcaacagcg acctcgcccc cgaaatatcc accgtattcc
     5521 tcatgccgcc gcgcgaaatc gccgaagtgt cgtccactat ggtcaaagga ctggtcgggc
     5581 cggaaggctg gacggaaacg atccaccgct acgtgccgca agctgtgtac gaaaaaatcc
     5641 ttgccgaaca tcaacacgaa aattgaaccc ttctattttt gcaaggcata tatggatatg
     5701 ttggaaattt tgttccgcca tcaagacttc gtcgccatca acaaaccggg cggcatatcc
     5761 gtccaccaag acagcggcga gaccggactg gcccgaacac tcgccataca gttgggcgta
     5821 gagcgtgtgt ggctgctgca ccgattggac aaacagacca gcggcatttt actgtttgcc
     5881 ctcaacagag aaagcgcgtc cgcccttagc ggacagtttg ccggcaaaag catcaaaaaa
     5941 acctatttgg cactatccga ccgcaaaccg tccaaaaagc agggttggat taaaggcgga
     6001 atggaaaaat ccagacgcgg aatgtggaag ttgacgcgca atacagaaaa tatcgccgtt
     6061 acccgattcc acagcatcag tatcgccgaa aaactgcggc tgttcatcct ggaaccgcat
     6121 acgggcaaaa cgcaccaatt gagagtggcg atgaaaagtt tgggcagtcc gattctgggc
     6181 gacagcttat acggcggaac agaatccgaa accatgtttc tgtatgcatg gaaaatacaa
     6241 tttgcctacc aaaaccgaca aatcgaaatt gttgcaccct taaaaaacga atggcagact
     6301 gaaaatatct ctcatgcgct ggaagaattt tatatggcaa aagcaggtta ataaatataa
     6361 attaatttat aaacaatatg ataaatattt ttataaaaat ttttcaagaa aacggttgac
     6421 tgcaaatctc ttca
//
LOCUS       DAXHKG010000107         6421 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.107, whole genome shotgun sequence.
ACCESSION   DAXHKG010000107 DAXHKG010000000
VERSION     DAXHKG010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.107"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            176..1234
                     /gene="alr"
                     /locus_tag="ACFMWP_001634"
     CDS             176..1234
                     /gene="alr"
                     /locus_tag="ACFMWP_001634"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HFC5892206.1"
                     /translation="MRPLNVQIRLGNLRHNYQILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLIRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1298..2653)
                     /locus_tag="ACFMWP_001635"
     CDS             complement(1298..2653)
                     /locus_tag="ACFMWP_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HFC5892207.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAASKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(2669..2941)
                     /locus_tag="ACFMWP_001636"
     CDS             complement(2669..2941)
                     /locus_tag="ACFMWP_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HFC5892208.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3067..3804)
                     /locus_tag="ACFMWP_001637"
     CDS             complement(3067..3804)
                     /locus_tag="ACFMWP_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC5892209.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4085..4984)
                     /gene="prmB"
                     /locus_tag="ACFMWP_001638"
     CDS             complement(4085..4984)
                     /gene="prmB"
                     /locus_tag="ACFMWP_001638"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC5892210.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGNGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5129..5722
                     /locus_tag="ACFMWP_001639"
     CDS             5129..5722
                     /locus_tag="ACFMWP_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892211.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNKSLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5834..>6421
                     /locus_tag="ACFMWP_001640"
     CDS             5834..>6421
                     /locus_tag="ACFMWP_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HFC5892212.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIAAAAMKA
                     AIPDYMKFGAGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVSKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVERPANPDAVSTCFKADKGAETVNNDTEHNAT
                     YFSHFPSKQKSTDGGRCPFLYRFPYFLSAGRAGFAG"
BASE COUNT         1719 a         1621 c         1502 g         1579 t
ORIGIN      
        1 atttgggaaa gcgattatat caggaaaagc aaaccgcctt cctacctgaa aactgctgct
       61 tcggcttgaa gacacaaggg tctttaatat tttaaaagcc ttgccgttgg attataattc
      121 cctaattgat ttcttaattt tgctaataaa cacttgtttg gtaaggaatg aatttatgcg
      181 tcctttgaac gtgcagatca ggttgggcaa ccttaggcac aattatcaga ttttaaagga
      241 aatgcacgga ggcaagctgt tggcggtagt gaaggccgac gcatacggac acggtgcggt
      301 cagatgtgct ttcgcgctgg cagacttggc agacggcttt gccgtggcga caatcgatga
      361 aggaatcagg ctgcgggaga gcggcattac ccatccgatt gtccttttgg aaggcgtatt
      421 tgaagcatca gagtacgaag cggtcgaaca atactcgctt tggccggcag tcggaaacca
      481 atggcagctt gaggctttgc tgatccgcca ttggaaaaaa cccgtcaaag tctggttgaa
      541 aatggattcg gggatgcacc gtaccggttt tttccctcat gattacgctt cggcatatgc
      601 ggcattgaaa cagtcggaat atgtggacag tattgtcaaa ttctcgcatt tctcctgtgc
      661 ggacgaaccc gaaagcggta tgacggaaat acagatggaa gcattcgatt tgggtacgga
      721 agggctggaa ggcgaagaaa gccttgccaa ttcggcggct attttgaatg ttcccgaagc
      781 acgcagggat tgggggcgcg cgggcttggc gttatacggc atttccccgt tcggaggcag
      841 cgatgacagg ctgaaacccg tgatgaggct ttcaacccgt atttttggcg aacgcgtttt
      901 acagccgcac tcccctatcg gttatggcgc aacattttat accagcaaat ctacgcgcgt
      961 cggtctgatt gcctgcggtt atgcggacgg ttatccgcgc cgcgccccaa gcaattcccc
     1021 cgtcgctgtc gacggcaaat tgacccgggt catcggcagg gtctctatgg atatgatgac
     1081 catcgagctg gacgcttcgc aagaaggttt gggacacgag gtcgaactgt ggggcgatac
     1141 ggtcaacatc aatactgttg ccgaagcggc cggaaccatc ccttacgaat tgatgtgcaa
     1201 tatcaaacgt gcaaaattca cttatatcga gtaatcaagt ccaaacaaaa atgccgtctg
     1261 aagcctttca gacggcattt ccccatcaaa accgcaatca gtttttcatc gattgaaccg
     1321 gtgcgggaat cctgccgccc cggttgacga acacttcgca tgagccttct tttaccggca
     1381 ttacaggcgc gtagcccaac aggccgccga actcgacgct gtcgccgacg gtttttccgg
     1441 ttaccggaat aatgcgcacg gcagtggttt tgctgttgat catgccgatg gcggcttcgt
     1501 cggcgatgat gccggaaatg gtgtgtgcgg gcgtatcgcc agggacggca atcatgtcca
     1561 gcccgaccga gcagacggcg gtcatcgctt cgagtttatc caacgtcagc acgcctgctt
     1621 cggcggcggc aatcatacct tcgtcttcgg aaacggggat aaacgcgcca ctcaaaccgc
     1681 caaccgcgct cgaagccatc atgccgccct ttttcacggc atcgttcagc aatgccaaag
     1741 ctgctgttgt gccgtgcgta ccgcagacgc tcaaacccat ttcttcaaga atgcgcgcca
     1801 ccgagtcgcc gacggcaggg gtcggtgcca gcgacaagtc gagaatacca aacgggatat
     1861 tcagcatttt tgaggcttcg cggccgatga gttcgcccac gcgggtaatt ttgaaggcgg
     1921 ttttcttcac aacttcggca acttcggtca atgtcgttgc atccgaattt tccaacgcgg
     1981 cttttacgac acctgggccg gatacgccga cattaatcac agcatccgct tcgcccgatc
     2041 cgtgaaacgc acccgccata aacggattgt cttccaccgc attgcagaac acgacgattt
     2101 tcgcgcagcc gaaaccttcg ggcgtaattt cagccgtgcg tttgatggtt tcgcctgcca
     2161 gcttgaccgc atccatattg ataccggcgc gcgtactgcc gacattgatg gagctgcaca
     2221 cgatgtcggt ggtcttcatc gcttcgggaa tggaacggat taacacctcg tctgaaggcg
     2281 acatgccttt ttgcaccaac gcggaaaagc cgccgataaa ggacacgccg atggctttgg
     2341 cagccttatc caaagtttgc gccacgctga cgtaagaatc ggctttgctc gccgccgcga
     2401 tttgggcaat cggcgtaacg gaaatgcgct gattcacaat cggcacgccg tatttggcag
     2461 acagatattt tgccgtcgcc accaagtctt tgccgaccgt ggtgattttg ttgtaaatgt
     2521 tttggtttaa cacgtcgatg tcggtgctga tgcagtcgtg caaatcaatg ccgatggtaa
     2581 tggtgcgcac gtcaaaattc tggtcggcca ccattttgac ggtttctaaa atctcgccgg
     2641 attgaatact catggctctc cctccgactt aaatacggtg catggcttgg aaaatttctt
     2701 cgttttgcat acggatatca agcgcgagtt ttttgctctc ttccgcaaac aaatccaaaa
     2761 cctcctgccg agatttgggg catttcgagg tatccaccaa gataatcatg gtaaaaaaat
     2821 cgtccatcag ctgttggctg atattaagga tgttgattcg gttttccgcc aaaattttgg
     2881 aaacatcgta cacgatgccg acgcggtctt tgccgatgac ggtgatgact gaattgttca
     2941 caggcttact ccttgcagat atccgttaaa gtccgaaatt ataccaccgt tggattttga
     3001 agaaatattg tcaacaatat atacatacaa aatgccgtct gaaactattt cagacagcat
     3061 caagattcag ggttcgatta aataaccatc cttatcccac tgggttttcc tgaccaactt
     3121 gtcatcctga taaacagcct cgctcttttt agaaccatct tcataccact ccaaaaccac
     3181 cccgttgcgt tgatggtggc ggatagacag ttccgagagt aatcggccgc tttcatccca
     3241 agtcagaatt ttggcaggct catcgttgac cataaccatt tccgttttga tattgccgtc
     3301 ggcataccat tgcttccata cgccgtttgc cttattctgt ttaaactgga tttcgctttc
     3361 cttgccgccg ttacggtaat agcggtaccc cgtaccttca ctcaaaccat ttttataagg
     3421 cataacggca gattttttac cgttcggata ccagttgacc cactccccgt ccggcttacc
     3481 cttgctgaag ccccccgcca tttttttctg accattaaaa tgccacaaaa tcaacatacc
     3541 gttttgcagg gtaggcacaa aagatttgat ttgcgttgaa gcaacgatat aaggttcgga
     3601 atatttcttc atcgacggat aataaaaatc ctgcgcgtgc gcaataccct ccgccacact
     3661 atattgcctg atataagcgg cagaagacat cgtcgccgtc agtttcccgt tctgattaaa
     3721 ataaacagaa taggtctgcg ccggcaaagc ggccgaaaaa cccaacagga cagttgaaaa
     3781 tacaatccga gataattttt tcattgcaat agcgatataa aaacaaggct gtgttttagt
     3841 aatcttttga tttcaattat ttgcaaggga aaagacaatt attttccggt taggaataaa
     3901 cctattctat tgaatatatt gaagccaagt acgcctatca acactatatt aaaacactgc
     3961 caaaaacaat taacttataa acaatatggt aaggatttct ctgccaagca tcaaacccga
     4021 gacaacgtat cgtaaaaatg ccgtctgaaa acaaatcgtc ttcagacggc atttcccctt
     4081 caactcactc ttcacccaat aactgctcgc gcgtcaagag gaaaacaaaa ccgtcgcccc
     4141 cgctggtttc caaccaagta aaaggcaact ccggatacgc tgcttccaat acatccctgt
     4201 tatgcccgat ttccaccagc aatacacctt tgggattcag aaactttgcc gcattcagaa
     4261 gaatctgcct ggtggcatcc aacccgtccg ccccgctgcc caatgccaat tccggttcgt
     4321 gcaaatactc ttcaggcaat aactcaaccg attccgcatc cacataaggc ggattggaaa
     4381 caatcaaatc ataagtgcct tccaatcctt caaacaaatc cgtatgaata agccggatgc
     4441 gttcttccaa accataatct tcgacattaa tccctgccac ttccaaagca tccaagctca
     4501 catcaaccgc atcaatttgg gcatcaggat aatgatgcgc catctgaatg gcaaggcaac
     4561 cgcttccggt gcaaagatcc aaagcattat gcaccagctc atcgtattct atccaaggac
     4621 gaagtccgtt acccaacaat tcataaataa aagaacgagg tatgattacg cgctcatcca
     4681 catagaaatc aaactctccc tgccatgcct ggtgtgtcaa ataagcggct ggaatgtgtt
     4741 cgacagcacg acgctcaata accgccagca cttcctcttt ttcagcttcc aagagttttg
     4801 catcaagata tggggcaagc atatccaaag gcaaattcaa agtatgcaga atcaaataag
     4861 ccgcttcatc atgcgcatta tctgttccat gaccaaaaaa gagccctgcc tcattaaaac
     4921 ggctgactgc aaaacgtaaa atatcgcgga tagtcgtcaa ttcttgtgct gcctgattaa
     4981 acataatatg aaccattctg cgtatagata cttttaatta taacagaaac aacaagcaaa
     5041 ccttttcata tcgccaaata accacccaat ctacccatac aactacataa atgcccgcgc
     5101 gaaaaccatc gcccgaacgg aaacgacaat ggccgacggt atgggcaatc tgattggctg
     5161 ggaaaaaacg gggcttgttg tcggtaagca gtggataacc gcaaaagacg acaaggtgtc
     5221 cgatgtctgc aatgccaacg gcgagatggg cgtaatcggg ctttacgagc ctttctcaca
     5281 cggcgcattg acgatacccg gtcatccgaa ctgccgatgc gaggttgttt ccgtatcggg
     5341 tggcgaattg ggggaatttg ccgaaaaaaa ggagcttcgt aaagcggcta tgcagtatgc
     5401 gcgggataac tttatcggca aaagctatgt caatgaaaac agcgggcatg aactgaaggt
     5461 aacttggcaa ggtgtgaaac acgctgcgtc aaaggcaaat caggcggaat tatccatcat
     5521 gacaaaactt gatgacttat tgcgctacgc aaaatatgag ggttcttatt cggataggaa
     5581 aggtcatcct aatattattg cagcacataa gtatcgtgcc gttgccaagg ttgggaataa
     5641 gtctttaaat atcggtgtga ttgtaaggga atttccagac gaccataaac attacgacca
     5701 tttcatcttg aaggatgaat aaagcccttt tgcagtgtcg ttctggagcg gatagcgtta
     5761 aggcaagtac acttccagcc ttgaaaaagg gctttaaatt cagcatgcca tttatacagg
     5821 caggagtaaa cccatgacaa agttatacgc agaaatcgcc aagatggaga cgcaggacga
     5881 cgacacggtc aaggtttggg gttacgcttc aagcgaggaa atcgattcgg acggcgaagt
     5941 catcgcggcg gcagctatga aggcggcgat tcccgattat atgaagtttg gcgcggggcg
     6001 cgagatgcac ggctcaaacg ctgcgggaac ggcaattgaa atcaacgttg aagacgacgg
     6061 cataaccttt ttcggtgctc atatcatcga ccccgttgtc gtgtcgaaag tcaaaacagg
     6121 cgtttacaaa ggcttttcca tcggcggcag cgttaccgcc cgcgatgatt tgaacaagtc
     6181 gcaaatcacg ggcttgaagc tgacggaaat cagccttgtc gagcgccctg ccaatcccga
     6241 tgcggtgtct acctgcttta aggcggacaa aggtgcggaa acggtaaaca acgatacaga
     6301 acataatgct acatatttta gccatttccc ttccaaacaa aaaagcaccg acggcggccg
     6361 atgccccttc ctttacaggt tcccctattt tttatccgcg ggcagagccg gttttgccgg
     6421 g
//
LOCUS       DAXHKG010000108         6255 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.108, whole genome shotgun sequence.
ACCESSION   DAXHKG010000108 DAXHKG010000000
VERSION     DAXHKG010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.108"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(391..825)
                     /locus_tag="ACFMWP_001641"
     CDS             complement(391..825)
                     /locus_tag="ACFMWP_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HFC5892213.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(828..1490)
                     /gene="exbB"
                     /locus_tag="ACFMWP_001642"
     CDS             complement(828..1490)
                     /gene="exbB"
                     /locus_tag="ACFMWP_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HFC5892214.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1556..2392)
                     /locus_tag="ACFMWP_001643"
     CDS             complement(1556..2392)
                     /locus_tag="ACFMWP_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HFC5892215.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     ETGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMENDE
                     QGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVKFE
                     LN"
     gene            2647..3285
                     /locus_tag="ACFMWP_001644"
     CDS             2647..3285
                     /locus_tag="ACFMWP_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HFC5892216.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3737..4537)
                     /locus_tag="ACFMWP_001645"
     CDS             complement(3737..4537)
                     /locus_tag="ACFMWP_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HFC5892217.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(4673..5179)
                     /locus_tag="ACFMWP_001646"
     CDS             complement(4673..5179)
                     /locus_tag="ACFMWP_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892218.1"
                     /translation="MDFFDFFAQGKYKKIATEQGLDRKYFIFHYIVCNLSAISSFCLM
                     KVIHSYTILCLLIMIIGIAFGFILRNRVLSIVKNKQKFLSDMFPLEMPFFSRVYKIPI
                     LARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFICYWFGLCYPANTYYVF
                     LSRDYKHI"
     gene            complement(5516..6157)
                     /locus_tag="ACFMWP_001647"
     CDS             complement(5516..6157)
                     /locus_tag="ACFMWP_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HFC5892219.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMMMSEKSGVPLYFDRAL"
BASE COUNT         1676 a         1565 c         1288 g         1726 t
ORIGIN      
        1 ggtatagcgg attaacaaaa accagtacgg cgttgcctcg ccttaactca aagagaacga
       61 ttctctaagg tgctgaagca ccaagtgaat cggttccgta ctatttgtac tgtctacggc
      121 ttcgttgcct tgtcctgatt tttgttaatc cactataaaa attagaaatg cacattttca
      181 ttattctcgc gcaggcagga ctccagactt acccatttca gtaatgtttg aaaataaaag
      241 aaaaatcaga tgtttgtatt cccgtctgcg cagaaatgga gacggcgctc tgtcgtctca
      301 tttttgtttt aatcaactat atatagctga ttaaacataa gaaatgccgt ctgaaagact
      361 ttcagacggc attcgttcaa gcgtcgaact ttattgcgcc ttggtttcgg ttacaaaacc
      421 gattttggtg attcctgcct gacgggcggc ttctaaagct ttgtttacat aatcgtattc
      481 caccgccttg tctgccgcaa tcgccacaat cacgttttca ttctgctcct tggcggcttt
      541 cagacggctt tccacttccc cgatttccac tttgcttgca gaatccccgc cgacataata
      601 gccgccgttc gcatcaatcg tcaggcgcag ggggtcttta ggctgtttgt cctgcttgtt
      661 tgtctgctcg gacgcggtcg gcagttccaa agggatggaa tgcgtcagca ccggcatagt
      721 aatcataaac acaatcagca acaccagcat cacgtccacc aacggcgtaa cgttgatgtc
      781 ggacatcgga gaatcgtcgc cggaattcat cgaaccaaat gccataatca gctatccttt
      841 tgattaagca ggcggacgtg caaatcgtgc gccatcgcat ccaaatcctg ggtcagtatt
      901 tttgtgccgc gattgaggaa gttgtatgcc aacaccgccg gaatcgccac gaacaaaccc
      961 gccgccgtcg ccaccagtgc ctcgccaatc gggccggcaa ccgccgcaat actcatctgc
     1021 ccgctttgcc cgatattgat cagggcgtgg taaatccccc aaaccgtgcc gaacagcccg
     1081 ataaacggcg cggtcgcgcc gatggaggca agcgcggtca tcccgtaatc aaaccggcgc
     1141 ataatctgcg ccatactgtt gcggatttga atgaccaaat actcgttcaa cggcaaagcc
     1201 tgcgccagtt cggacgcttc gtttcggcgg tagttgcggt aagactgcaa tgcctcttgc
     1261 gccagtttgg acaaaggcgc atcgacggcg cgcacttttt cgaccgcgtc gttcagcgac
     1321 aaagtatcgc gcatatgccg tttgacggcg gcattccctt tgcgcgcccg atacagcttg
     1381 atgcagcgca agacaaccaa acaccacgtt acgatactca tcaacagcat caacacaaac
     1441 acaccgatca ggacgggatc gcccgattca aatactaatt tcaaattcat aatgattcca
     1501 acactgaaaa aaccaatcaa acatccaagc tgccgcaaac cgctgcggca accgcctaat
     1561 tcaattcaaa cttgacgggg actttaaact ccgtccaggc attggcttga aaatgcccgt
     1621 tttgcgccgc cttgcgtgcc gcattgtcca accgagaaaa accactgctt ttcacgattt
     1681 taacggactc gacatgaccg cccggagaaa ccaaaacgct caaaacaacc gtaccctgct
     1741 cgtcattctc catagaaagc gtgggataag ccgggcgcgg aatgctgccg ttggcgcgta
     1801 aaggattgcc tttgctgctg ccggctcctt ccccgtgttc gcctttgaca ccgccgctac
     1861 ctttaccgct gccttctccg cgccccgttc cgtctccttt ggtaccggtt tcttccccat
     1921 taccctgctc gctgtctgct ttggcagaag cattgctggg atgttcggca ggtttttcag
     1981 acggcttctc gaccggtttt tccgccggtt tcgggacagg cttcgcttcc ggcttaggct
     2041 ctggtttcgg tttttcttcg ggtttcggct tttcttcagg tttcggctct tccttaggct
     2101 gctgaatatc cgcatccgcc tttttcgtaa ccaccggctt caaaaccggc ttgggcggct
     2161 cgacaggttt gggcggctca ggctcaggtt gcggctcagg cgcagcaggc gcacctgcgc
     2221 cttcgggtgc accgtcccct ccgccaaaat cacccaaatc gacaaattcg ataacatttc
     2281 ctgactctat cacgggcagc ttgtgcgcct gccagagcaa tgccaccatt gccaaatgca
     2341 gcagtgcgac ggaaaacacg actgcggggg ttaaaattcg ttctttatcc ataattcggg
     2401 cataataata gcaacaattc ctatttgcaa cctattttta caatttttgg tcatatgaat
     2461 gtctgttccg ttcacaggca aaccgtgttt aaacgctgta ttacagcaaa tcatcagata
     2521 acgggccggc agaaaaaatg attccgtctg atttcttatt ccaataaaat caggttagat
     2581 gatatattgc cgcttctgtc tgtcagccgt ttcgggctgc acaccacatc tgttcaaagg
     2641 aaaaccatgt ttcaaaattt tgatttgggc gtgtttctgc ttgccgtcct gcccgtgctg
     2701 ctcgccatta ccgtcaggga ggtggcgcgc ggctatacgg cgcgctactg gggagacaac
     2761 actgccgaac aatacggcag gctgacactg aaccccctgc cccatatcga tttggtcggc
     2821 acaatcatcg taccgctgct tactttgatg ttcacgccct tcctgttcgg ctgggcgcgt
     2881 ccgattccta tcgattcgcg caacttccgc aacccgcgcc ttgcctggcg ttgcgttgcc
     2941 gcgtccggcc cgctgtcgaa tctggcgatg gctgttctgt ggggcgtggt tttggtgctg
     3001 actccgtatg tcggcggggc gtatcagatg ccgttggctc aaatggcaaa ctacggtatt
     3061 ctgatcaatg cgattctgtt cgcgctcaac atcatcccca tcctgccttg ggacggcggc
     3121 attttcatcg acaccttcct gtcggcgaaa tattcgcaag cgttccgcaa aatcgaacct
     3181 tatgggacgt ggattatcct gctgcttatg ctgaccgggg ttttgggtgc gtttattgca
     3241 ccgattgtgc ggctggtgat tgcgtttgtg cagatgttcg tctgactggc tttcagacgg
     3301 cataaacgct ccagaaaacg cggcaggaca tattgccctg ccgcgttttc ctgtagtgta
     3361 atcttatttt tttcatcatt attagaacca agttgcatga taataccttt cattaactga
     3421 aacactgatt aagaaactcc agtctgtcta atgatgaggt tttcacatcg ccaaaacttg
     3481 ccaatcaaat gctggattta ttgccgtctg agatttggtc aaatccaaag gcgacattct
     3541 tagaccctgt gtgtaaatca ggggtatttt tgcgtgaaat cgtcaaacgc ttggatgaag
     3601 gcttgaccaa tcaaatacca gataaacaaa ctcgcattaa ccacatttta aaaaatcaag
     3661 tttttggaag tactgccacg tatgtaggta gctttgaccg atatttgcat aaaaactcct
     3721 ttgctggtga aaggaattat tttgccaatt ttaaaatatt tctagcacca aatagtacaa
     3781 tgacaaagac aatcatgcca atgattaaat caggatagct agaatgagtc aataacgtca
     3841 atgctcccgc cgctatcaca ccgatattga tgataatgtc attggatgta aaaatcatgc
     3901 tggctttgat atggatttct ttattttgat ttttgctcag tagatataag cacagccagt
     3961 ttgcaatcaa tgccaaaaat gccgtgccaa tcatcagttg ataattgggc agctgctcag
     4021 caccgataaa acgcctaatc acttctatca ccccaaataa cgccaatatt atctgcgtta
     4081 tccccgccaa aaatgccaca cgttttttat acgccagcgt cataccaatg gctgatagcg
     4141 ccaatatata gacaaagctg tccgccagca tatctagact atcagcaatc agccccatag
     4201 aattagcaaa aataccaacc gaacactcta tgataaaaaa cacaaagtta atcatgagca
     4261 cttgatataa taatcttttt tctaagtgct catcaggctt gttaaacact atcttatcaa
     4321 caatcacttc ggtggaaatg atatgactat caaaattaag cggttcaagt acttgtaaaa
     4381 tcgttgtatc ttgattatcg tgatagacgg ttaagcaccg cccagcaata tcaaactgta
     4441 attcataaat atcagacaca tcttttaaac gcatgcgaat gagctgttct tcggacgggc
     4501 agtccatttt ggtaatgtta aaaatggtct ttttcatcta tttagttcct tgttttgatc
     4561 aggttggctc aaataaatct gtgtttatat tgctgcttgg taatttttgg atggtttgag
     4621 taaattgatt aggttaaaat ttacctttgg aagtaccgcc acgcataata gtttagatat
     4681 gtttataatc tctggataaa aaaacgtaat aagtgtttgc tggataacaa agtccaaacc
     4741 aatagcagat aaaataaggc atccaccccc tttcttcatt aaggataaga gatatcgaga
     4801 aacaaatcat aactaaacag aaaaaatttt ggagataaag ccatttcatt cccctattca
     4861 agaatctggc caagataggt attttgtata ctctagaaaa gaaaggcatt tccaagggaa
     4921 acatatcaga taaaaacttt tgtttatttt ttactataga tagaacccta tttctcaaga
     4981 taaatccaaa tgcaatgcca attatcatta ttaataaaca aaggatagta taactatgga
     5041 taaccttcat taaacaaaaa gaagaaatgg cagataaatt acatacgata tagtggaata
     5101 taaaatattt acggtctaaa ccttgttcag ttgcaatttt tttatactta ccttgcgcaa
     5161 aaaaatcaaa gaaatccatt aaactatctt tcacattaga aatttaaaag ctaaataata
     5221 caacaaacaa tgtgaagtac tattcatggt ttatttaaaa aataatacta ttctgaacat
     5281 tatttagata cagaaattaa caaattagaa ctaaacaagc ttttaaatac tttaatttta
     5341 ttggaaagct ataaaaggaa ctataacttt acacactagt cacttctttt taagaggcaa
     5401 aagggattgg gaaggtcgtc ttggagataa gcactggtat ttcggccaat ggtaaataga
     5461 gtttacctca aatagggtag aacctccttc atctgtcagt taataacagc cacttttaca
     5521 atgccctgtc aaaataaagc ggcacgcccg atttttcact catcatcatc aaataaccca
     5581 tcaccttttg aggccattcg ataccgcgca ccacggtcag attcctcaaa acggggaaaa
     5641 ccaaaatatc ctccatgccg attccgccgt tgatgccgtc tgaagcaccg tccatcaaat
     5701 tctccaactc ttgcaaatct gcgtttatgc gttcgagata ttgggcggtt ttattcaaat
     5761 tggcggaaaa gctgccgatg cttttctctt ttttgtctgt aaaatatttt accgcttccg
     5821 gcgttgcaaa ttcgggcagc ccgattttga tcacgcgcgg ctgcaccagt ttgtcgttgt
     5881 atccgcccac cttgtccagc cacgcccgta tctcggggcg gacttcgtct ttcagacggt
     5941 cttcgcggtc gaaatgccgc acaatgtcca aactctcgcc cataaacgaa ccgtcttctt
     6001 tttgcaggac gggcacttgt ttcgcaccga tcataccgat cggcgttgcc tcgtcgtcgt
     6061 ttgccagcac ggcttcttca acgtccgcgc caaacagccc ggcagccatc cgcgcacgca
     6121 cacaaaacgg gcaatggtcg taaatataca gtttcatcaa aatattcctc gtcaacctgt
     6181 cggtaccggc taccttaaca ccccgcgcca cccgaaacaa gtttatcttc ccgcctatgc
     6241 accgtaaata aataa
//
LOCUS       DAXHKG010000109         6206 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.109, whole genome shotgun sequence.
ACCESSION   DAXHKG010000109 DAXHKG010000000
VERSION     DAXHKG010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6206
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.109"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..217
                     /locus_tag="ACFMWP_001648"
     CDS             <1..217
                     /locus_tag="ACFMWP_001648"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892220.1"
                     /translation="SVMRNFPLSSVKIIMIIYYIILHRNEKSGKAKNPPPSFPRKRES
                     RILMPQEFIKDGRGLKVWIPACAGMTV"
     gene            complement(1209..1454)
                     /locus_tag="ACFMWP_001649"
     CDS             complement(1209..1454)
                     /locus_tag="ACFMWP_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892221.1"
                     /translation="MLKSIELNSHIRNRLAAYLKGRGMDFQTAMREEKGNKEIASIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            1566..1994
                     /locus_tag="ACFMWP_001650"
     CDS             1566..1994
                     /locus_tag="ACFMWP_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HFC5892222.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGSAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            2006..2482
                     /locus_tag="ACFMWP_001651"
     CDS             2006..2482
                     /locus_tag="ACFMWP_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HFC5892223.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLKQAYLSVEKERTVRVRIV
                     GQQAWLTLKGYISELSRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(2832..3320)
                     /locus_tag="ACFMWP_001652"
     CDS             complement(2832..3320)
                     /locus_tag="ACFMWP_001652"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HFC5892224.1"
                     /translation="MLKLTLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLHVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTSYAFVHYL
                     RY"
     gene            complement(3388..4443)
                     /gene="aroG"
                     /locus_tag="ACFMWP_001653"
     CDS             complement(3388..4443)
                     /gene="aroG"
                     /locus_tag="ACFMWP_001653"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HFC5892225.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            complement(4605..4832)
                     /locus_tag="ACFMWP_001654"
     CDS             complement(4605..4832)
                     /locus_tag="ACFMWP_001654"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892226.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCSVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            5059..5367
                     /locus_tag="ACFMWP_001655"
     CDS             5059..5367
                     /locus_tag="ACFMWP_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892227.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVTATFYSQLKSK
                     "
     gene            complement(5416..5520)
                     /locus_tag="ACFMWP_001656"
                     /pseudo
     CDS             complement(5416..5520)
                     /locus_tag="ACFMWP_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            6121..6206
                     /locus_tag="ACFMWP_001657"
                     /pseudo
     CDS             6121..6206
                     /locus_tag="ACFMWP_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
BASE COUNT         1554 a         1555 c         1417 g         1680 t
ORIGIN      
        1 cagtgtcatg agaaattttc ctttgtcaag tgttaaaatt ataatgatta tatactacat
       61 tatactacat cgcaatgaaa aatcaggaaa agcaaaaaac cctccgccgt cattcccgcg
      121 aaagcgggaa tctagaattt taatgccgca agaatttatc aaggatggtc ggggtttaaa
      181 ggtctggatt cccgcctgcg cgggaatgac ggtttagaaa tcacccgaaa caagaaaaag
      241 aaccgaaacc gaacaagccg gattcccgcc tgcgcgggaa tgacgggatt tcaggttact
      301 gtttttgatt ttctgttttg tggaaataac gggattttgg atgatgtgca tttatcgaga
      361 aaactaaaaa ccctccgccg tcattcccgc gaaagcggga atctagacct ttcggtgcgg
      421 aaacttatcg gataaaacgg ttttccctgc atcctggatt cccactttcg tgcgaatgac
      481 gggatatagg tttcactacg gacgtgttca gattaccgcc tgcgcgggaa ggacggaatt
      541 tcagattgtt gtttttgatt ttctgttttg tgggaataac gggattttgg atgatgtgca
      601 tttatcggga aaactaaaaa ccctccgccg tcattcccgt gaaagcggga atctagaatt
      661 tcaatgccgc aagaatttat cggggatgtc cggggtttga aggtctggat tcccgcctgc
      721 gcgggaatga cggtttagaa atcacctgaa acgagaaaaa gaaccgaaac cagataagtc
      781 ggattcccgc acgggaggga aggacgggat ttcaggttac tgtttttgat tttctgtttt
      841 gtgggaataa cgggattttg gatgatgtgc attttcggga aaactaaaaa ccctccgccg
      901 tcattcccgc gaaagtggga atctagaatt ttaatgcggc aaaaatttat cggaaaaaac
      961 cgaagtttaa agacctagat tcccgcctgc gcgggaatga cggtttagaa atcacccgaa
     1021 acgagaaaaa gaaccgaaac cgaacaagcc ggattaccgc ctgcgcggga atgacggctc
     1081 aaaagttacg aaacgaaaaa taaccgaaac caaacaagtc ggattcccgc gcgggcggga
     1141 atgacgataa gcataatttc aatctgccat attgtctttt cacttgcctg aaaacagatt
     1201 tcagccgcct atccctgcat ccggcggctg atgtagtcgg caatcaaatc ccgcttttcc
     1261 caaaaaaact tctgcatttt ttgttcggaa tacagtttgc ggaccagagt gggcagaccg
     1321 ctgtggacga tggaggcgat ttctttgttg cctttttcct cccgcatcgc cgtctgaaaa
     1381 tccatacccc tgcctttcag atatgctgca aggcggttgc ggatgtggga attgagttcg
     1441 atggatttga gcattttgcc tccgttttgc ggtaaggatt tatttgattt gtttatccgc
     1501 ctgattttat cacgtttccc aagcggtttg cctgtacaat accgcttttc ggcagggtgt
     1561 gggcgatgat gttttcttgg ttcaagctgt ttcacttgtt ttttgtcatt tcgtggtttg
     1621 cagggctgtt ttacctgccg aggattttcg tcaatatggc gatgattgat gcgccgcgcg
     1681 gcaatcccga gtatgtgcgc ctgtcgggta tggcggtgcg gctgtaccgt tttatgtcgc
     1741 cgttgggctt cggcgcggtc gtgttcggct cggcgatacc gtttgccgcc ggttggtggg
     1801 gcagcggttg ggtacatgtc aaactgtgtt tggggttgat gctcttggct taccagttgt
     1861 attgcggcgt gctgctgcgc cgttttcagg attacagcaa tgctttttca caccgctggt
     1921 accgcgtgtt caacgaaatc cccgtgctgc tgatggttgc cgcgctgtat ctggtcgtgt
     1981 tcaaaccgtt ttgacggagc atcttatgcc gatagaaatc gaacgccgtt ttttgattgg
     2041 aaacgacaac tggcggcaat acgccgacga accgctgctc ttgaaacagg cttatctttc
     2101 tgtcgagaaa gaacgtaccg tccgtgtccg tattgtcgga caacaggcgt ggctgacact
     2161 gaaaggctat atttcagaac tcagccgcag tgagtttgaa tacgaaatcc cgcttgccga
     2221 tgcggaaaag atgatggaaa cgatgtgtcc gtttaagatg gaaaaatggc gttatccggt
     2281 cagatggggc ggcagcctgt ttgaaatcga tgtttttctt ggcgataatg cgcctttggt
     2341 cgtcgcggaa atcgagttgc ccgacgagaa tgccgatttt gaccgtccgg actggctggg
     2401 acgggaaatc actgccgacg gtatgtttac caatgcctat ttgagcaggc atccgttctc
     2461 aagctggaaa aatgccgtct gaaacggctt cagacggcat tctccgacaa ccatcgcaaa
     2521 tccaaagaca gcctctatat ccttatttct gctttctttg ttccattatt cccaataaat
     2581 ccccataacc taaaatctcg tcattcccgc gcaggcggga atccggttct ttaaacttcg
     2641 gttttttccg ataaattgct ttagcttttc gtttccggat tcccgctttt gcgggaatga
     2701 cgatggaaga ttgttgttat ttcggataaa ttaccctaac tttaaaatcc cggattccca
     2761 tcttcggggg aataacaata ttttctattt cagcccatca tttgcggggg attttataga
     2821 gagtttatat ttcaatatct caaataatgc acaaaagcat agctcgtgcc tttgctgctg
     2881 acacggcgtt ccgtccgctc tgcttctttc caatgcgtcc ggtctattgc ggggaaaaat
     2941 gcatctcctt ccacagacaa atccacttcg gttatccgca aatcggtcgc caatggcatc
     3001 gcttgtccgt atatctgcgc gccgcccata atgacggctt cttccgcgcc tgcgcacaat
     3061 gccaatgccg cctccaaact tgccgccgtt tccgcgcctg ccgcgcaata atccgcctgc
     3121 cggctgatga cgatgttcct ccgtccgggc aggggtttga cgtgcaggga ttcccacgtt
     3181 ttccgcccca taatgacggg tttgcccaag gtataggctt tgaaaaatgc gaaatcttcg
     3241 gggatgtgcc aaggcatcgc attgcccgcc ccgatgcaca ggttttccgc acacgccgca
     3301 attagggtta atttgagcat atttcctcca caaaaatgcc gtctgaacgc ttcagacggc
     3361 attttatgac attccgtgtc aaaaatctca accggcgcgc gccatacgtt ttttgtttgc
     3421 acctgccaac aatgccaaca gttcttcagt cgcgccccaa ccgatacacg catcggtaat
     3481 gcttttgccg tacacttccg gcttgtcctg cctgccttcg accaaatggc tttccaccat
     3541 cacgcccatg atattgccgc cgtcctgttc caattgggcg gcaatatctt gtgccacttc
     3601 catctgccgg gtgtaatcct tgcggctgtt ggcgtggctg caatctatca tcagcttgtc
     3661 ggttacccct gccgcacgca gttgttccgc cgcctcgctg acgtgtcccg catcataatt
     3721 cggctctttt ccgccgcgca aaatgacatg acagtcagga ttgccgccgg tatggacaat
     3781 ggcggaatgc ccggccttgg ttacagacag gaaatgatgc gaatggctcg ccgcaccgat
     3841 tgcgtcgatg gcaatcttca aattgccgtc cgtaccgttt ttaaagccga cggggcagga
     3901 cagcccgctt gccaattcgc ggtgaacttg gctttcggtc gtccgcgcac cgattgcccc
     3961 ccaagaaatc aagtccgcat aatattgcgg cgtaatcata tccaaaaact cggtagaggc
     4021 aggcataccc atattgttca gcgacaacaa caggctgcgc gcctgacgca aaccgaaatt
     4081 gatgtcaaac gtaccgtcca aatgcgggtc gttaatcaaa cctttccaac ccaccgtcgt
     4141 cctcggcttc tcgaaataaa cgcgcatcac aatcaaaagc tcgttttcat actgcttgcg
     4201 gagtttcaac aaacgctccg catattccaa cgccgctttc ggatcgtgaa tcgaacacgg
     4261 cccgataata accaacagcc gcttgtccct gccgtgaacc aaatcggaaa tttcctgacg
     4321 ggtgcggtga accaagcccg aagcctcttt ggaaatcggc agctcgtaaa gatgggcaat
     4381 cggcggcaac aactctttaa cttctttaat cttaatatcg tctgtggggt aatggtgtgt
     4441 catcttgcat ctttcctgat ggttttttat acgcggctta ggttacatcg tttaccttgc
     4501 acaaacaagt gcaacatatt actacaaagc tattttattt caaaataact gatatatctt
     4561 ttttcataga ttttaaattt catattttta atattttagg aattttattc caaagaaaaa
     4621 gaaacagatt gataaaaaca atacccgcca ttcattcgga caaaaccgca cggaacatcc
     4681 gttttcccat ttccacgaca atccggtaca gaacaccccg ctgccgattc cgcctgcaca
     4741 tccggcaaaa tttcatacgc aaggaaaatg ttgaaaacaa aaagaactaa ttgcttgaaa
     4801 aaagatttaa ttggaatgcg ggtatttccc acactttctc catttattca tcctcattat
     4861 aggaagaaaa acatgaaaaa accctgcttg cactctcact tgcagccgtg tccgccgtta
     4921 cggtagccga tattcctgag tctaacggca agggcaaagc catcatcggc gataaggaaa
     4981 aacaccgtta ccaagcatga aaaccttgtt ttgaaagtct atggcgaaat ccgccaagat
     5041 ttgggggacg gatgatccct gaccccttgg gcggatgcat atgcagattt gcgcggcaaa
     5101 accaaagtga tgacgaccca gatgtgtgct tcccgcgatg tcagcaaaag cgccaaaggt
     5161 tggagtgtcg gtatcggtct gaatgtaggc aaacagttga ccgacagcgt cggtctcgag
     5221 tttgatccat actaccgtca caaaacaatc tgcaaacccc gtgagattgt tttggacggc
     5281 gacaaaacca aaatgggccg ctccaaatcc aacgagtacg gcttccgcgt aaccgcaacg
     5341 ttctatagtc aattaaaatc aaagtaggac agtagtgcat cgtcaaatcg ggcgtaatca
     5401 gacaaaacgg tttgcagatg cagaacgggc ggtaacttcc agtacaaaaa acggagcagt
     5461 tctttctgta cttttttctt taatttgcag tgtgttatct tcatatttcg agggtaacat
     5521 atctgctaat ctagtacagc ccctagttta aagctttgtt tcttaagtcc gcagagtatg
     5581 ccatggttag accttcaaag ttgagtattg tactattttg tttttaatta actataaaac
     5641 gcttgtgtga ataggaagac tgcagaatat tgctgccttt tcctgtttgc tttaaataaa
     5701 cagaaaatgc cgtctgaaac cgattttcag acggcatttg tcccttaaaa cacgtttttt
     5761 caagcgcgac cataccaaac acccacaggt tgccttccac ccttcgtaca acctttgctc
     5821 catcaaacat ccacttccta aatactgatg tctgcttagg ttgaatcggc attcgtacga
     5881 ttacggcaca ccgcctaatc tgtacctgcg tctgttgcgc ccaataccaa agactacctg
     5941 aaaatctccc aaacttttca ggtagcctta tcacgttttc gactgttacc acacgcccaa
     6001 agaccgcctg aaaccctttt tcagacgttc cgctccgata cccccccaac aaaacgccgc
     6061 ccgaacgcat gttcagacgg cattttcttt gcgtcgattc attccccgat atagcgcagg
     6121 tctttttcca gccatttccc ttccaaacaa aaaagcaccg acggcggccg atgccccttc
     6181 ctttacaggt tcccctattt tttagc
//
LOCUS       DAXHKG010000110         6203 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.110, whole genome shotgun sequence.
ACCESSION   DAXHKG010000110 DAXHKG010000000
VERSION     DAXHKG010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6203
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.110"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            272..718
                     /gene="yciA"
                     /locus_tag="ACFMWP_001658"
     CDS             272..718
                     /gene="yciA"
                     /locus_tag="ACFMWP_001658"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HFC5892228.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIAQGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPILAGLLPTP"
     gene            complement(769..1590)
                     /locus_tag="ACFMWP_001659"
     CDS             complement(769..1590)
                     /locus_tag="ACFMWP_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC5892229.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPNMVARGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1709..2167
                     /locus_tag="ACFMWP_001660"
     CDS             1709..2167
                     /locus_tag="ACFMWP_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC5892230.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2332..3447)
                     /gene="lst"
                     /locus_tag="ACFMWP_001661"
     CDS             complement(2332..3447)
                     /gene="lst"
                     /locus_tag="ACFMWP_001661"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HFC5892231.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKTGDETGGTVRILLGSPDKEMKEISEKAAKDFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKN"
     gene            complement(3650..3820)
                     /locus_tag="ACFMWP_001662"
     CDS             complement(3650..3820)
                     /locus_tag="ACFMWP_001662"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892232.1"
                     /translation="MAIMAYFGGFVRALFDLGVFERGGVKGRGKWFSRVWRRSEVLCL
                     MCGGIFSVKLIL"
     gene            3880..6105
                     /locus_tag="ACFMWP_001663"
     CDS             3880..6105
                     /locus_tag="ACFMWP_001663"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HFC5892233.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTSDIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVIVPEATSVSIVFTDKQGNKKELREPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGDKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAEGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNGKSPKRKAGELDNRGSHFYLTLYWAQELAEQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAVDIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT         1662 a         1814 c         1387 g         1340 t
ORIGIN      
        1 tgacgcggcg ggaatctatc ggaaatgact gaacccccga gattctagat tcccactttc
       61 gtgggaatga cggttcagtt gcttagggta ggatttggcg ggattggcgg actgaagccc
      121 actctacagc cccgccctac aatacgcctt gcgaatctgt cccacgcccg cccttgtatg
      181 tctcaaatgg gttaaactac gcacttcccg acttcccgtt tcgggcaggg gtgcaggttc
      241 gatttatctt tcaataaaac aaggaaactt tatgcagcac gaagaaggca accgccaacg
      301 ccctcaaggc gaactgctcc tgcgtaccgt cgctatgccg cgcgatacca atcccaacca
      361 agacattttc ggcggctgga ttatgtcgca gatggatttg ggcggcggca tattggcagc
      421 ggaaatcgca caaggacgca tcgttaccgt cgccgttcag gaaatgaact tcatccgccc
      481 ggtcaaggtc ggcaacgtcg tctgctgcta cgggcattgc gtccgcgtgg gcaatacttc
      541 cctccagctt aaagtcgaag tctgggtgaa aactttgatg aacgattgcg ttaccgaaga
      601 ccgccacctc gtaaccgaag ccgtgttcac ttatgtcgcc atcgatgcgg aaggcaatcc
      661 gcgcccgatt ccgaaagaag gcaaccccat attggcgggc ttattgccta ctccgtaaaa
      721 atgcccgtaa aaatgccgtc tgaaactgtc ttcagacggc attccgcatc atttgaacca
      781 agatctgatg cgggaaaaca gcgacatact ctgtttttca aagtcttccc gcacttccgg
      841 cacggctttt tttatcacct tcattcctgc aaaagtctgc gccacgggca taatttcaat
      901 cgtgttcaca ttcatatgcg ccggccggcg gtacagccac aatgcggttt ccgcaatatc
      961 ttcggggcgg ataaattcca caccctcata cacgcctgct gccttctcgt catcgccttt
     1021 gaagcgcacg ttggaaaact ccgtattgcc gcacaaaccc ggctcgatat tggtaacgcg
     1081 gatgttctta tccgccaact ccgcgcgcaa attcaggctg aactggcgca caaacgcctt
     1141 ggtcgccccg taaacgttgc tgccggcata agcataattg cctgcaatcg aacccaaatt
     1201 catcacataa ccgccgcccc gagccaccat attcggcaaa atcttgcgcg ttagaaacgt
     1261 caaacccaaa acattggttt gaatcattgt ttcccaatct tcaaaatccg ccttgtccgc
     1321 cgtgtccaga cccaaagcca gcccggcatt gttgatgagg cagtcgatgt cggaaaattc
     1381 atcagggatg ccgtttaagg cgttttccac cgactcgcgg cgcgacacgt ccatttccaa
     1441 agggtaaaac aaagcaccca attcatccgc caaggcctga agcctgtccg cacgacgcgc
     1501 cgcaccgata acgcggtatc ccgccccgac aaacgcgcgg cacatcgctt cgccgaatcc
     1561 tgccgaagca ccggtaatta aaacagccat tgtttttcct ttctttctcg tttcccaaac
     1621 ctgtttcagg tatcataata cccttcagac ggcatcgcgc cggctgaaaa tgacaacaac
     1681 cataccacca cgacaggaca cattcaatat gaaaacccaa atcagccttg ctgctgccgc
     1741 catcacactg ctcctttccg cctgcggagg cagcggaata ccttcccaac ccaaaggcga
     1801 aatttccgaa aaccgcaccg ccgcgttcaa atctatgatg cccgacttct cgcgtatggg
     1861 caaaatggtc aaaggcgaag aaccttacga tgtcgaaaaa ttcaaacagg cggcagcggc
     1921 gtttgccgac agcagcaaaa aaccgtttac gctttttgag tccgacccgc aaggcaacgg
     1981 gcgcgcactg cccgccgttt ggtcggatgg tgcaaaattt gaagccgaaa aaacaaaatt
     2041 cgccgccgcc gtcgaaaaac tcaacgccgc cgcccaaacc ggcaaactgg acgaaatcaa
     2101 agccgcctac ggcgaaaccg gcgcaagctg caaatcctgc cacgacagct tccgcgcgcc
     2161 cgaataacat ccaaaacaaa acaatgccgt ctgaagactt cagacggcat tttctttgcc
     2221 atttcagcac acgcaaagca atcagaaatt atcgtcaatc caaatgaaaa aacgctatcc
     2281 ttatttttac cccacgcact ccgccatttt ctattttgat ttgctatgcg attaattttt
     2341 atcgtcaaat gtcaaaatcg ggatgccgga ttgggtaaac agggcataca ccggcttgag
     2401 ccaataatct tctggaaggg aagccggttt caatgcgtaa acgtgcacat tgggaaaatc
     2461 cttcatcgtc aacgccgcgc cgctgaaaaa ggtataaatt tcatacctcg tatgcgggtt
     2521 tttcttaatt tcgcgcaaaa tatagtcttc gatgacatag ggcgaattta atgtggttac
     2581 gccggaaagc ccgtaggttt ggcgggggtg cggcgcgaca tattgtatgt tgaaatcttt
     2641 tgccgccttt tccgaaattt ccttcatctc tttgtcgggt gaacccaaaa gtatccgcac
     2701 cgtgccgccc gtttcgtccc ccgtcttcag ttcggacgca tcgaacagcg gcaggtaagt
     2761 catcttgcgg cggccgtcgt ccataatgtt tttcaaaccc ttgaatatcg tgtaatgctc
     2821 gtcggaagca ttgcgggttt tggcgatgct ccaatctccg atcatcatcc gggcaaaatt
     2881 ccgcttgatc gtcccgttta cagaaaactc atcgcccaaa tagctgctgc tttgaattaa
     2941 attgcctgtc ccgtcgtcaa aggttttgat ttccgcatcc gggtaagtgc tcaaaaaggc
     3001 ggcaatgctg actttttcca aacttgccaa ataaatccgc ttgactttcg gcagcagcat
     3061 cgactttacc ttcagctccg ccatcgtcgg aatgaaatta aacgatttgt tcaaaccgta
     3121 gggcaggtgg aaaaaatacg cccgctccgc cttatccttt atctgattga aataataatc
     3181 gtatttttca ttcctgtttt cagacatcag caccacataa aaccgctccc ccggatgctg
     3241 cgccataatc ctttccgcca ccttcatctg caatatggta tagcagaaaa tcagattgac
     3301 cggttccccc tcttcattga agagtttgtc cttcagcagg gaaaccgcat tcctttcccc
     3361 ctgatttacc cggtcaaatg tataaaatat cccgaaacaa aaaacaatca aacacaacac
     3421 ggtcaaacaa gcctttttca agcccatatc cctaaaactc cattccgaca aattgaacat
     3481 acgccccgag tgtcccggga cggaaaaatg cggaatttta gcagatattc cgacagttac
     3541 cgaatattat agtggattaa atttaaatca ggacaaggcg acgaagccgc agacagtaca
     3601 agcagtacga caaggcgagg caacgctgta ctggtttaaa tttaaaccac tataaaatca
     3661 atttcaccga aaatatgccg ccgcacatca ggcacagcac ctccgaccgc cgccaaacgc
     3721 gggaaaacca tttccccctt cctttcacgc cgccgcgttc aaacacgcca agatcgaaca
     3781 aagcgcgaac aaagccgcca aaatatgcca taatagccac gcacattccc cgcgcaatgt
     3841 gttccaaaag aaaaaaccaa cctacaagag aataatccta tgactcaaaa atccaccatt
     3901 gtttataccc ataccgacga agcacccgcg ctggcgaccc aatcgctgct gccgattgtg
     3961 caggcttttg cccgccacgc cgatattgat gtcaaaacca gcgacatttc tctctccggc
     4021 cgtattttgg cggcgtttcc cgaatacctg accgaagcgc aacgcgtacc tgatgcgctt
     4081 gccgaattgg gcgaactggt gaaacaaccc gatgcaaacg taatcaaact gccgaacatc
     4141 agcgcgtccg taccgcaact gactgccgcg attaaagaat tgcaatctaa aggctttgcc
     4201 gttcccgact atcccgccga cccgcaaacc gatgaagaaa aagccgtacg cgaacgctac
     4261 gaccgcatca aaggcagcgc ggtaaaccct gtcctgcgtg aaggcaactc cgaccgtcgc
     4321 gcccctaaag cagtgaaaaa ctttgcgaaa aaaaatccgc acagcatggg cgcatggacc
     4381 aaagactcca aaacccacgt tgccaccatg caaagcggcg acttttttca taacgaacaa
     4441 tctgttatcg tacctgaagc gacttccgta tccatcgtat tcaccgacaa acaaggcaac
     4501 aaaaaagagc tgcgcgagcc cgtcgccctg aaagccggcg aaatcatcga cgcgaccgtg
     4561 atgagtaaaa aagccctgct cgccttcctt gccgaacaag taaaagatgc gaaagcaaaa
     4621 ggcgtgttgt tctcgctgca catgaaagcc actatgatga aagtgtccga cccgattatc
     4681 ttcggacacg ccgtcaaagt attcttcgcg cctgtttttg aaaaattcgg cgacaaactg
     4741 gctgccgcag gtgtcaacgt caacaacggc ttcggcaacc tgcttgccaa tctggacaaa
     4801 ctggatgcgg acacccgcac cgccgtcgaa gccgaaatcg ccgccgttta cgctgccaac
     4861 cccgatttgg cgatggttga ttccgacaaa ggcatcacca acctgcacgt tcccagcgat
     4921 gtcatcgtcg atgcctctat gcctgcgatg attcgcaatt ccggccgtat gtgggacaaa
     4981 aacggcaaag cgcaagacac caaagccgtg attcccgaca gcagctatgc cggcgtttac
     5041 caagcaacca tcgacttctg ccgcgaacac ggcgcatttg acccgacaac catgggtact
     5101 gtgcccaacg tcggactgat ggcgcaagcg gcggaagaat acggctcgca caacaaaacc
     5161 tttgaaatcg aagccgacgg tcaggttcaa gtcattgatg cggaaggaaa agtcctgatg
     5221 caacacgacg ttgaagcagg cgacatctgg cgtatgtgcc aaaccaaaga cgctccggtc
     5281 aaagactggg tgcaactcgc cgtcaaccgc gcccgcctga gcaacacgcc tgccgtgttc
     5341 tggctcgatg aaaaccgtcc gcacgacaag agcctgctcg ccaaggttaa agcctacctt
     5401 gccgaactgg ataccaatgg cctcgacatc cgcgtcctcg ctcctgaaga agccgccaag
     5461 ttcagcttgg gtcgtctgaa aaacggcgaa gacaccatct ccgtaaccgg taatgtcttg
     5521 cgcgactacc tgaccgactt gttcccaatt ttggaactcg gcacaagcgc gaaaatgctg
     5581 tctatcgttc cattaatgaa cggcggcggt atgtttgaaa ccggcgcggg cggttctgca
     5641 ccgaaacacg ttcaacagtt cctcgaagaa aaccacctgc gttgggactc tttgggcgaa
     5701 ttcctcgcac tcgccgtatc gtttgaacat ttggcgcaaa aaaccggcaa tgccaaagcc
     5761 caagtcctcg ctgacacttt ggatgccgcc accgaaaaac tgctgttgaa cggcaaatcg
     5821 cctaaacgta aagccggcga actcgacaac cggggcagcc atttctacct taccctctac
     5881 tgggcgcaag aattggcgga gcaagacaaa gatgccgaac tgaaagccgc atttacgcca
     5941 ttggcagccg ctttgaccgc cgacgaagcg aaaatcgttg ccgagctttc cgccgtacaa
     6001 ggcaaagcgg tcgacatcgg cggctactac gcagccaatc ctgaaaaagc ggcacaagtg
     6061 atgcgtccga gcgtaacctt taatcaggca ctaaacgcct tataagcaca aaggtaaaaa
     6121 tgccgtctga acattcgtcg ttcagacggc attagttatc cctatctgcc tgattatgat
     6181 taaacgccgc acccattgga tat
//
LOCUS       DAXHKG010000111         6146 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.111, whole genome shotgun sequence.
ACCESSION   DAXHKG010000111 DAXHKG010000000
VERSION     DAXHKG010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6146
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.111"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(550..1134)
                     /gene="rnhB"
                     /locus_tag="ACFMWP_001664"
     CDS             complement(550..1134)
                     /gene="rnhB"
                     /locus_tag="ACFMWP_001664"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HFC5892234.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAAGPEEIASLNILHATMLAMKRAVDGLAVRPEKIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALEKYGVLPEHRRDFAPVRNLFAQQALF"
     gene            complement(1202..3097)
                     /gene="mnmG"
                     /locus_tag="ACFMWP_001665"
     CDS             complement(1202..3097)
                     /gene="mnmG"
                     /locus_tag="ACFMWP_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HFC5892235.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKATIREMLENQENLDLFQQAVEDVTLDGERISGVVTAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGSADMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIQGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3372..4799)
                     /locus_tag="ACFMWP_001666"
     CDS             complement(3372..4799)
                     /locus_tag="ACFMWP_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC5892236.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            4959..5948
                     /gene="pdxA"
                     /locus_tag="ACFMWP_001667"
     CDS             4959..5948
                     /gene="pdxA"
                     /locus_tag="ACFMWP_001667"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HFC5892237.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAVEAVEAGKLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFCIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1279 a         1613 c         1796 g         1458 t
ORIGIN      
        1 tcattcccgt aaaaacaaaa aatcaaaaca gaaaactgaa atatcgtcat tcccgcgcgg
       61 gcgggaatct aggtctgtcg gtacggaaac ttatcgggaa aaacggtttt tccaaccctg
      121 agactccgga ttcctgtttt cgcgggaatc cggttttttg agtttcagtc atttttgata
      181 aattcttgta gctttgagtt tctagattcc cgcttttgcg ggaatgacgg tttggaagtt
      241 acctgaaatt caaaaaaaaa cggaaaccgg acggattgga ttcccgtttt cacgggaatg
      301 acggatttta ggtttctttt ttgattttct gtttttcgcg ggaatggcgg tttggaagtt
      361 acctgaaatt caaaaaaaaa aaacggaaac cggacggatt ggattcccgc ctgcgcggga
      421 atgacggatt ttaggttttt ttttttgatt ttctattttt cgcaggaatg acggtttggg
      481 ttctttctct ttggagttgc gatgccggaa atgccgtctg aaggcttcag acggcatttt
      541 tgtgccggtt taaaacaagg cctgctgcgc gaacaggttt ctgacggggg cgaagtcgcg
      601 gcggtgttcg ggcagcacgc cgtatttttc gagggcttcc aaatgctgct tcgtgccgta
      661 acctttgtgt ttgtcgaaac cgtattgggg atggcgttgc gccagtgcgt acatttccgc
      721 atcgcgggcg gtctttgcca aaacggatgc ggcggatatt tcgatgattt tgctgtcgcc
      781 tttgacgacg gcttcggcag ggatgttcaa atgttcggga atgcggttgc cgtcgatgaa
      841 tattttttcg ggacgcacag ccaaaccgtc aacggcgcgt ttcatcgcga gcatggtggc
      901 gtgcaggatg ttgaggctgg cgatttcttc gggcccggcg gcggcgacgt gccacgcaac
      961 cgcctgattt tttatcattt cggcaagcgc gtcgcgtttt ttctcgctga gttttttgga
     1021 gtcggtcagt ccgggcaggt cgaatatttc cggaaggatg acggcggcgg caaacacgct
     1081 gccgactaaa ggcccgcgcc ctgcctcgtc cacgccggcg gtcagtatgt gcatgatgtt
     1141 tcctgtcggg atggcacgat gccgtctgaa cggtgtttca gacggcatcg cgccgatgtg
     1201 tttatttcgc gtctttaaac ccgcgcttca aatgcaccat cagcaatgcc actgccgcag
     1261 gcgttacgcc ggaaatgcgg cttgcctgcc cgacggtttc aggtttgtgc tggttgagct
     1321 tttgctgcac ttctgccgac aagcctttga ctttgccgta atcgatgccg tcgggcagtt
     1381 ttaaggtttc gatgtcgcgg cggctgtcga tttcttcgtt ttggcggtcg atatagcctt
     1441 ggtatttgac ttggatttcg acttgttcga ccacttcggc ggagaggcgt tcagacggca
     1501 tcgcgccttc gagcgtcatc agcgcggcgt agtcgaggtt cgggcggcgc aggaggtcgt
     1561 gcaggttggc ttcgcggctg agcttttgcc cgaatacgcg gatttgttcg tcttcggcga
     1621 gtttttgcgg cgtgtaccac gttgttttca aacgttggat ttcgcgttcg atggcttcgc
     1681 gtttttcgtt gaacatgcgc cattgcgctt cacccaccaa gccgattttg tagccgtctt
     1741 cggtcaggcg catatcggcg ttgtcttccc tgagttgcag gcggtattcg gcacggctgg
     1801 tgaacattcg gtagggttcg ttcacgcctt tggtgatgag gtcgtccacc aatacgccga
     1861 gataggcttg ttcgcggcgc agcaggagcg ggtcttgttc gcggacgtat tgcacggcgt
     1921 tcgcgcctgc cagcagtcct tgcgcggcgg cttcttcgta gcccgttgtg ccgttgattt
     1981 gtccggcgaa gaagaggcct tggatggttt tggtttcgag gctggctttg aggttgcgcg
     2041 ggtcgaagta gtcgtattcg atggcgtagc cagggcgcag gatatgggcg ttttcaaggc
     2101 ctttcatgct gcgcacgagc gcgatttgga tgtcgaacgg caggctagtg gagataccgt
     2161 ttggatagta ttcgtgcgtg gtcaggcctt cgggctcgag gaaaatctgg tggctgtctt
     2221 tgtcggcgaa gcggttgatt ttgtcttcga tagacggaca ataacgcgga cccacacctt
     2281 cgattttgcc agtaaacatg gggctgcggt cgaagcctga acggatgatg tcgtgggttt
     2341 gcgtgttggt atgcgtaatc cagcaggaca cttggcgagg gtgcatatcg gcgctgccgc
     2401 gtacggacat tacgggaacg ggcgtgtcgc cgggctgttc ggtcagttgg gagaagtcaa
     2461 tcgtgcgccc gtcaatacgc ggcggcgtgc cggttttcag acggccttgc ggcaggttca
     2521 attcgcgcaa acggccgccc agcgatttgg cggcggggtc gccagcgcgg ccgccttcgt
     2581 agttttccaa accgatgtgg attttgccgg acaaaaacgt gccagcagtt agcacgacgg
     2641 cgcgtgcttt aaactccacg cccatcgcgg taaccacgcc gctgatgcgt tcgccgtcga
     2701 gcgttacgtc ttcgacggct tgttggaaaa ggtcgaggtt ttcttggttt tccaacattt
     2761 cgcggatggt ggctttgtac aggatacggt cggcctgcgc gcgcgtggct cgcactgccg
     2821 cgcctttgct ggcgtttagg cggcggaact ggatgcctga tttgtcggtg gccaacgcca
     2881 tcgcgccgcc gagcgcgtcg agttcgcgta ccaaatgccc tttgccgatg ccgccgatag
     2941 aggggttgca cgacatttgt ccgagcgttt cgatattgtg tgtgagcaaa agcgtctgcg
     3001 cgcccatacg ggcggcggcg agcgcggctt ccgtgcctgc gtgtccgccg ccgacgacga
     3061 taacgtcgta ggttttgggg taaatcatgt gggtcatgtg tgtattgcct gacggtgttt
     3121 cagacggcat ttatagtgga ttaacaaaaa ccagtacagc gttgcctcgc cttgtcgtac
     3181 tgcttgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttgaacc actatattca
     3241 atatgccgtc tgaaaaacga aatggattca aaagtaaagg gttgggattg tacgcttgtt
     3301 cgccctgttt ttacagtgtg cggaaaggga aaagccgctt cgcggggaag cggctccggt
     3361 aagggcggga tttaccaaac gtcggatttg atacggcgtt tcaggcccgg atgttcggaa
     3421 agtttgaact cggggtcttt gcccattttc agcttggcgg tgtaatcgcg cagcagcata
     3481 aacgccaagg gcgagagcag caggatggcg acaaggttga tccacgccat aatgcccatc
     3541 gccatatccg ccatatccca gaccaaaggc acattggcaa ccgcgccgaa atagacccac
     3601 gccaaaacca gcatacggaa aacggcggta atcagccaat ggcttttgat gaattggacg
     3661 ttggactcgg cataggcata gttgccgata acggtggaaa aggcaaacat aaacaggatg
     3721 acggcgagga agcccgcgcc ccattgcccc acttggctga caatcgccgc ctgcgtcagc
     3781 gccgcaccgc tcaaatcgcc gtaaggctgt tggtaaatca agatgatgaa ggcggtgcaa
     3841 gaacaaacga tgatggtatc gacaaacacg cccagcattt gaatcatacc ttgcgaaaca
     3901 gggtgtttca cttcggcggc ggcggcggcg ttcggcgcgg aacccatacc cgcctcgttg
     3961 gaatacaggc cgcgtttgat gcccatcatc atcgtttgcg aaatcagacc gccgagtaag
     4021 ccgcctgctg ccgcgtcgaa tttgaacgcg cccgaaaaaa tctgaccgaa cacgtccgga
     4081 atcatcggaa tattggtcaa aatgatgaaa agcgcgataa agaggtacaa aaccgccatc
     4141 agggggacga cgatttccgc cgctttagat atgcgcctga tgccgccgaa gataatcggc
     4201 gcggttaaaa tcaccagggc gacgccgaca taatgaggct cccaacccca cgccgctttg
     4261 acggtatcgg caatggtatt ggtctgaacc gcttcaaaca caaagccgaa acagaaaatc
     4321 aggctcaggg cgaacaacac gcccagccat ttctgcccca gcccttgagt gatgtagtag
     4381 gcagggccgc cccggaaatg gtggttgtcg tagtcgcgga ctttaaagag ctgcgccagc
     4441 gaagattcga caaacgccga actcataccg attaaggcgg ttacccacat ccaaaacacc
     4501 gcgcccggcc cgccgacttt gatggcgatt gccacgcccg cgatattgcc cacgcccacg
     4561 cggctggcaa ggccggttac aaatgcctga aacggcgtga tgccgtgagg gtcgtccccc
     4621 tgtttgcggc cgccgagcat ttctttgatg ctgcgcccga acaggcggaa ttggacaaag
     4681 cccgtggtta cggtgaagaa aagccccgta cccaaaagca tataaaccaa gtatgaccac
     4741 atcggatcgt tgatggcgcc gacccagccg tgcagccatt cggtaaagtt ctcgttcata
     4801 tcgcttcctt aaagttgaaa ctcgcacata ttggcggtat gcaagcaggg tttaaatttt
     4861 gtaaacgccc attctagcag attgtcaaca aaatcagaaa aatttacatc gccgcgcggc
     4921 tgcggcgtta gaatcgcatt ttgtttggag caaacacgat gaaacagcct gtttttgccg
     4981 ttacttccgg cgagcctgcc ggcatcggcc ccgatatttg tttggacttg gcgtttgcac
     5041 gcctgccctg ccgctgcgcg gtattgggcg acaaacacct gttgcgcgcg cgcgccgaag
     5101 ccttgggcaa aagcgtcgtc ctgcgcgact tcgatccaga atcaggcggc gcggcatacg
     5161 gcgagctgga agtgctgcac atccctgccg tcgaagcggt tgaggcgggc aaactcaatc
     5221 ccgccaacgc cgcctatgtg ctgcaacttt tggacaccgc gctcgcaggc atttcagacg
     5281 gcattttcga cggcatcgtt accgcgccgc tgcacaaagg catcatcaac gacgcgcgcg
     5341 caagcacagg ttttttcagc ggacacaccg aatatctggc ggaaaaaagc ggcacggggc
     5401 aggtcgtgat gatgcttgcc ggcaaaggcc tgcgcgtcgc cctcgtaacg acccacctgc
     5461 cgctgaaaga cgttgccgcc gccatcacgc aaccgctgat tgaaagcgtc gcacgcattt
     5521 tgcatcacga cttaaaacac aaattctgca tcaaaaatcc caaaatccta gtcgccggac
     5581 tcaaccccca cgccggtgag ggcggacacc tcggacacga agaaaccgac accattatcc
     5641 ccgcgctcga aaacctgcgc cgcgaaggga taaacctcgc cggcccgtat ccggcggata
     5701 ccttgttcca accgtttatg ctcgaaggtg cggatgccgt attggcgatg taccacgacc
     5761 aagggctgcc cgtgttgaaa taccacagtt tcgggcaggg cgtgaacatc acactggggc
     5821 tgccctttat ccgcacctcc gtcgatcacg gcaccgcgct cgatttggcg gcaaccggca
     5881 gggcggattc cggcagcctg ataactgccg tggagaccgc cgtcgagatg gcgcgcggca
     5941 gcctttaaag atgataaaag acccgtcatt tccgcgcagg cgggaatccg gtctgttcgg
     6001 tttcagttgt ttttgggttt cgggtaattt ccaaatcgtc attcccgcgc aggcgggaat
     6061 ccagaccttc gggcgacggc aatattcaaa gattatctga aagtttgagg ttctagattc
     6121 ccgttttcac gggaatgacg aaaggt
//
LOCUS       DAXHKG010000112         6122 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.112, whole genome shotgun sequence.
ACCESSION   DAXHKG010000112 DAXHKG010000000
VERSION     DAXHKG010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6122
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.112"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(155..2083)
                     /gene="dnaK"
                     /locus_tag="ACFMWP_001668"
     CDS             complement(155..2083)
                     /gene="dnaK"
                     /locus_tag="ACFMWP_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HFC5892238.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDHIIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTSD
                     IDDVILVGGQSRMPKVQEAVRDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2291..2563)
                     /locus_tag="ACFMWP_001669"
     CDS             complement(2291..2563)
                     /locus_tag="ACFMWP_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892239.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2749..3435
                     /locus_tag="ACFMWP_001670"
     CDS             2749..3435
                     /locus_tag="ACFMWP_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC5892240.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRNTKNLSVISVKGDSMEGVLNDGDSILVN
                     HSENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNHPADDVEII
                     GRVEWFGRTI"
     gene            3567..3905
                     /gene="erpA"
                     /locus_tag="ACFMWP_001671"
     CDS             3567..3905
                     /gene="erpA"
                     /locus_tag="ACFMWP_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HFC5892241.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3922..4068
                     /locus_tag="ACFMWP_001672"
     CDS             3922..4068
                     /locus_tag="ACFMWP_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892242.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4065..4529
                     /locus_tag="ACFMWP_001673"
     CDS             4065..4529
                     /locus_tag="ACFMWP_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HFC5892243.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPKVDCGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWEKRAELHDYFSYLGLDIITRRYMELETVVPPEEGEGEGEG
                     GDGEIPEYLELHSEWEDDISAPSQAEPPPRNIKPLVFGLLIAFLGYLLGKIF"
     gene            4564..6075
                     /gene="ubiB"
                     /locus_tag="ACFMWP_001674"
     CDS             4564..6075
                     /gene="ubiB"
                     /locus_tag="ACFMWP_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HFC5892244.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT         1380 a         1358 c         1645 g         1739 t
ORIGIN      
        1 ataaaaaatt tccagagaac cgatacaaca gttggaactt gggtttggga atattacggt
       61 agatgaactt ggaacctctg ttatgctatg gtcttttatc tcaattgaaa aaagcgcgaa
      121 tcaaacggtt cgcgcttttt tcagacggta ttaattattt tttgtcgtct tttacttctt
      181 caaagtcggc atctacgaca tcatcgtctt tctttgcaga agcattggct tgttcgcttt
      241 cgcctgcttg ggcttcagct tgtgcttgag cgtaaaccat ttcccccagt ttttggctgg
      301 ctgcgcccag cgcctcggtt ttggcatcga tagcggcttt gtcgtcgcct ttaactgctt
      361 cttcggcttc tttcagcgcg gcttcgattt tttctttctc ggctgcgtcg agtttgtcgc
      421 cgtagtcggc caaagatttt ttcacagagt gaatcagggc ttcagcttgg ttgcgggaag
      481 cgaccaattc agtcagtttt ttatcttcct cggcattggc ttcggcatct ttcaccatgc
      541 gttcgatttc ttcttcgctc aaacctgaag aaccttggat ggtgatgttg gctgctttgc
      601 cagtgccttt gtctttggcg gaaacgtgca ggatgccgtt ggcgtcgatg tcgaaggtga
      661 cttcgatttg cggcataccg cgcggtgcgg gtgcgatgtc gcccaagttg aactgaccca
      721 aagatttgtt ggcagaagcg cgttcgcgtt cgccttgcag tacgtggatg gttactgcgc
      781 tttggttgtc ttcggcggta gagaacactt gcgacgcttt agtcgggata gttgtgttct
      841 tttgaatcag cttggtcatc acgccgccca tggtttcgat acccaaggac agaggggtta
      901 cgtccagcag caatacgtcg ctgcggccgc cgctcaatac ttcgccttgg atcgctgcgc
      961 ctacggcaac ggcttcgtca gggttcacgt ctttgcgcgg ttctttgccg aagaaatctc
     1021 taacggcttc ttgtactttc ggcatacggg actgaccgcc gaccaaaatt acgtcgtcga
     1081 tgtcgctggt gctcaagccg gcatctttca atgcggtgcg gcaaggctcg atagagcggg
     1141 caatcaggtc ttcaaccagg ctttcgaatt tggcgcgggt aattttcatc gccaagtgtt
     1201 tcgggccggt tgcgtccatg gtgatgtacg gcaggttaat ttcggtttgc tggccgctgg
     1261 acaattcgat tttggctttt tcggcagctt ctttcaggcg ttgtagagcc atcacgtctt
     1321 gtttcaaatc aatgccttgt tcttttttga actcggcgat gatgtggtcg atgaggcgtt
     1381 ggtcgaagtc ttcaccgccc aagaaggtat cgccgttggt tgccaatact tcgaattgtt
     1441 tgtcgccgtc gaggttggcg atttcgatga tggaaatatc gaaagtaccg ccgcccaagt
     1501 catatacggc tactttgcgg tctttgttgt cgcctttgtc cataccgaat gccaaagcgg
     1561 ctgcggtcgg ctcgttgatg atgcgtttca cgtccaaacc ggcgatacgg cctgcgtctt
     1621 tggtggcttg acgttggctg tcgttgaagt aggcagggac ggtaatcacg gcttcggtta
     1681 ctttttcgcc caagtaagct tcggcggctt ctttcatttt acgcaggact tctgcggaaa
     1741 tttgaggagg agacagctct ttgccttgtg cttttaccca tgcgtcgccg ttgttggctt
     1801 tgatgatttc gaaaggcata gattcgatgt cgcgttggac ttctttgtct tcaaatttgt
     1861 ggccgatcaa acgtttggcg gcgtaaatag tgtttttggc gttggttacc gcttggcgtt
     1921 tggcaggcgc accgacgagg atttcgccgc cgtccaaata agcgataacg gacggcgtgg
     1981 tgcgtgcgcc ttctgcgttt tcgatcactt tggtttgacc gttttcggaa atggccaaac
     2041 aagagttggt tgtacctaag tcgataccga ttacttttgc catgtggata atcctatttg
     2101 attttgctta ttttgagaaa tatgttggaa cattttgtcc cgatgggctg taaatagggc
     2161 gggcggcggg ctgtttcaag ctacagcatg gctataagta tataacttta tgaatatatt
     2221 ggttttatat ttgatttaat acatttggct ccaatgcatt caagcataat gtttcaaatg
     2281 gcaggcaggt ttattcatag acgatgccgg cgagcatttc ctgttcgttc aagttgccgt
     2341 actctttttc ccagtcgtgt gaagactcga tgatgtcgca ttctttggaa agggagactt
     2401 gttctgcatc catatctttg gcgttcagta tgttgaattg ttcgcatagg gatgcggata
     2461 aagtgatgtc aggctgtttg gcttcagaac ggttttcttg gaaggcaaag cagaatgcgg
     2521 taaatgccgc agcatagata agatatttgc cggttttctt cattttctat cctttttctg
     2581 tcaactcagg attaaaccta tggaaaatct taaaaattat gtattgagta agaaaaatca
     2641 taatttaaat ttagtttatc atagttgttc cgtttttggg atagctaagg taaaatatat
     2701 ttcatgttta ctttagatga ttgaatgaag gggagcggaa ggatatttat ggaaaccttt
     2761 aaagacagac tggttttttt atggaaaagc gaagcgaagc aggcaaaaat cgcatccgat
     2821 attgaaatga cgattgcggg cttcagcagg atatggaatg aaggcggtct gccgaagtct
     2881 gaaacattaa aaaaaatcaa gcagttgaag gggtgtagta tcgattggct gctgaccggg
     2941 gagggtaatc cgtttccgga tgaagcccca aaaaaatccc ttgcttacga taccttggga
     3001 aatgaagtcg atacggacga gtttgtcttt gtgccgagat atgatattcg ggcggctgcg
     3061 ggatacgggc agtttgtcga tcatgaggaa ccggtattta caatggcgtt cagacggcat
     3121 tggattgaga attatgttac ccgcaatacg aaaaacctgt ctgtaatttc cgtcaagggg
     3181 gattcgatgg agggggtttt gaatgacggc gattcgattt tggtcaacca tagcgagaat
     3241 acgccgaggg acggactgta tgtgttgcgg attaatgaaa atctgctggt taaacgttta
     3301 cagattgtac cgggcgggat aatcaacgtt atttccgcca acgaggctta ccctgctttt
     3361 gaaattaatt tgaatcatcc tgccgatgat gtggaaatca tcgggcgggt cgagtggttc
     3421 ggcaggacga tttgagtttg gggcttgaaa tcgggagcgg tcaaacttat ctgtaaggca
     3481 gttccttttc agggaacaag cccccgcttg cctttgaagg gggtttgaga gagaatgcag
     3541 aaaatattat attaaggaat aacaccatgt cggatgaaag ccctattatt tttactgaca
     3601 gctgctgtgc caaagttgcc gatttgattg ccgaagaaaa caatcccgat ttgaaattgc
     3661 gggtttttgt caatggcggc ggctgttcgg gtttccagta cggatttact tttgatgaaa
     3721 tcaaaaacga cgacgatttt gaaattgaga aaaacggttt ggtctttttg gtcgatccga
     3781 tgagctatca atatctggtc ggcgcggaaa tcgactatac ggaaagtttg cagggttcgc
     3841 aattcgtcat ccgcaatccg aatgcggaaa caacctgcgg ttgcggatcg tcgttttccg
     3901 tatgaccgct tggtttgtgt gatgccgtct gaacgttcag acggcatttt tacttttgga
     3961 aaatatatta tcgggatgaa ttcacatata atccgattgt ttgaagatga atcgggtttc
     4021 ccgaaaggaa cgggcggaac ggtatcaggc gtatttgttc ccttatgatt gagatgagta
     4081 aagattaccg aaacgatttg tacgatgtat atgtttccta cccgcccaaa gtggattgcg
     4141 ggcttatccg ggagtgtctc agggagaatc tcggcgaaga aaaggcggaa ggattgattg
     4201 agtccctcga ttccaaaccg caagtgctgg ttgaggaaaa atgtacctgg gaaaagcggg
     4261 cagagttgca cgattatttc agctatttgg gtttggatat tattactcgg agatatatgg
     4321 agttagaaac ggtcgtgccg ccggaggaag gggagggcga aggagaaggc ggggatgggg
     4381 aaatacccga atatcttgaa cttcatagcg aatgggaaga tgatatttcc gcaccttcgc
     4441 aagccgaacc gccgccccgc aatatcaaac cgctggtttt cgggctgctg atagcctttt
     4501 tgggctatct gctcggtaag attttttgat tgtccgataa atgctgtatt cgggatttta
     4561 tatatgaaat ggttgaaacg cctgacggtt attgtcggga ctttttaccg ctatcggctg
     4621 gcaggtctgt gcgcttcgct gatgggtagc ggttggatat gcgctctgct gaaaatgatg
     4681 ccgcagtcgt ccaaattgaa aaacgaaccg cctgccgtcc gtctgcgcct tgccttggaa
     4741 agcctggggc cgattttcat caagttcggg caggttttgt ccacacgccc tgatttgatt
     4801 ccgcacgatt acgccgtcga actggcaaag ctgcaagaca aagtgccgcc ttttgacgcg
     4861 cggctttcgc gtgaacaaat cgaaaaatcg ttgggtcagt ccatcgaaaa gctgtatgcg
     4921 gaatttgaaa ccgagcccgt cgccagcgcg tccatcgccc aagtacacaa agcccgcctg
     4981 cattcgggcg aacgagtggc tgtcaaagtt ttgcgcccca accttttgcc ccttatcgaa
     5041 caggatttgt cgctgatgcg tttcggcgcg gtttgggtgg agcgtctgtt tgccgacggc
     5101 aagcgtctga agccgctcga agtggtggcg gagttcgaca aatacctgca cgacgagttg
     5161 gatttgatgc gcgaagccgc caatgccgga cagctcgggc gcaatttcca aaacagcaat
     5221 atgctgattg tgcccaaggt gttttacgac tactgcacca gcgacgtgct gacaatcgaa
     5281 tggatggacg gcacgccggt tgccgacatc gccaaactca aagcagacgg catcgatttg
     5341 cacaaactcg ccgattacgg cgtggaaatc tttttcacgc aggtcttccg cgacggcttt
     5401 ttccacgcgg atatgcaccc cggcaatatt ttggttgccg ccgacaaccg ctacatcgcc
     5461 ctcgatttcg gcatcgtcgg cacgctgacc gattacgaca aacgttatct cgccatcaat
     5521 ttcctcgcct ttttcaaccg cgattaccgg cgcgtcgcca ccgcccacat cgaatcgggc
     5581 tgggtgcctg ccgacacgcg tgcggaagaa ttggaagccg ccgtccgcgc cgtgtgcgaa
     5641 ccggtgttca acaaaccgat ttcgcagatt tccttcggct tggtgctgat gcgcctgttt
     5701 gaagtcagcc gccgcttcaa tgtcgaaatc caaccgcagc ttgtgctgct gcaaaaaacg
     5761 ctgctcaaca tcgaaggctt gggccgccag ctcgatcccg atttggactt gtggaaaacc
     5821 gccaaaccgt ttttggtgaa atggatgaac gggcaggtcg gccctaaagc cctttggcgc
     5881 aacctcaaaa acgaagcccc cgactgggcg caaatcatcc cttcattgcc gcgcaaaatc
     5941 agtgcgttga ttgatgaaaa ccgccagcag gaaatgcgtg atgcctatat ccatttggtc
     6001 aaagtgcagc agcggcaaag cctgtggctg gctgtgattg cggttgtttt gctgctgatt
     6061 ttgcttttga aataggcttt gtccgaatca tcgcccgact ccgcccgttt ataaggaaat
     6121 cg
//
LOCUS       DAXHKG010000113         5945 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.113, whole genome shotgun sequence.
ACCESSION   DAXHKG010000113 DAXHKG010000000
VERSION     DAXHKG010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5945
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.113"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(79..483)
                     /locus_tag="ACFMWP_001675"
                     /pseudo
     CDS             complement(79..483)
                     /locus_tag="ACFMWP_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(789..2048)
                     /gene="rho"
                     /locus_tag="ACFMWP_001676"
     CDS             complement(789..2048)
                     /gene="rho"
                     /locus_tag="ACFMWP_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HFC5892245.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTSNYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            complement(2268..4652)
                     /gene="ppsA"
                     /locus_tag="ACFMWP_001677"
     CDS             complement(2268..4652)
                     /gene="ppsA"
                     /locus_tag="ACFMWP_001677"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HFC5892246.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFSINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYSGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            5064..5885
                     /locus_tag="ACFMWP_001678"
     CDS             5064..5885
                     /locus_tag="ACFMWP_001678"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HFC5892247.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
BASE COUNT         1279 a         1376 c         1691 g         1599 t
ORIGIN      
        1 tctttgagct aaggcgaggc accgccgtac tggtttttgt taatccacta taaaaattta
       61 tggggctgtc ctagataact aggataaact cgattttact aattgtttta aaatggaaat
      121 ttgaactttt atctcactgt tgttaaaacg tcgttcgtac ccctttaaat acagctcaaa
      181 atgcgctttg ggaatgccgt caaacttgcg taaatgacgt tttgcccggt ttcaaaagtt
      241 cccaattcca ttgatatggt tttgtcgttc agcaaaataa ctttcatctg cttctacttt
      301 gccgtcaaac atttccaaat gcggactgtt ttgataaata agtaatcgta aacgatgaaa
      361 ataataggct gcggtatttt tattaacgcc tactaactct gctgctgttc ttgcagttac
      421 acctgcgaca aacagttcaa tgagtttatt ttgtttatac cggcttagac gactttttct
      481 cataggggca actctaactt aatttgaatt tccctagtta tctaggacag ccccaaattt
      541 atacaaaaat gagcgcggtt cggcgcaacc ttgaatcaag ttcccgcatc ggttttcatt
      601 gccggtacgg atgcgttcaa gccggttttg caaaggccgc gctttcggca agcggacacg
      661 gacactgccg acggttgcgc cgttaacggg gggagggagg agctgcgccg accgtgtgaa
      721 tgaaagtgcc gtctgaaacc cgattttcag gcttcagacg gcatttcgca ttaatgcggg
      781 cggcgcgttt atttgccgcg catcagttca aagaaatcat cattgttttt agaggctttg
      841 atttttccga ttaaaaattc ggctgcctcg atttcgtcca tcgggtgcag gaacttgcgt
      901 aagagccaca tacgttgcaa ctggtcgttc ggcacaagca gctcttcgcg gcgcgtgccg
      961 gatttgttga tgttgatggc ggggaagagg cgtttttccg ccatacggcg gtcaaggtgc
     1021 aattccatat tgccggtgcc tttgaattct tcgtaaatca catcgtccat acggctgccg
     1081 gtttcaacca atgcggtggc gatgatggtc agcgaaccgc cttcttccac gttgcgcgcc
     1141 gcgccgaaga aacgtttggg gcggtgcagt gcgttggcat cgacaccgcc ggttaggatt
     1201 ttgcccgagg taggcacgac ggtattgtag gcgcgggcaa ggcgggtaat cgaatccagc
     1261 aggatgacca cgtctttttt gtgttctacc atacgcttgg ctttttcaag caccatttcg
     1321 gcaacttgga cgtggcgttg cgccggttcg tcaaaggtgg aggaaaccac ttcgccgcgg
     1381 acggaacggc tcatttcggt tacttcttcg ggacgctcgt caatcaagag gacgatgagt
     1441 tcgacttcgg gatagtttga ggtaacggcg tgggcaatgt tttgcagcat cacggtttta
     1501 ccgcttttgg gcggggcaac caagagggcg cgctgacctt tgccgatagg ggaaatcagg
     1561 tcgatggcac gtccggtcag gttttcttcg gactttaagt cgcgttccag cttcaactgt
     1621 tcggtcggaa acagcggggt caggttttca aacaggattt tatggcggca tacttccggg
     1681 tggtcgccgt tgatggtatc aagcctgacc agggcaaaat agcgttcgtt gtcttttggg
     1741 acgcgcacgc ttccttcgat ggtgtcgccc gtatgcaggt tgaagcggcg gatttgggtg
     1801 ggcgagacat agatgtcgtc ggggccggca agataggacg tgtccgcgct gcggaggaag
     1861 ccgaagccgt cgggcaggat ttcaagcgtg ccggagcagg tgaaaccctc gccttttttc
     1921 atcatctggc ggacgatggc aaatacgaga tcttgtttgc ggaatcggtt ggcgttttcg
     1981 atgccgtgtt cttccgccaa ttctaagagt ttggaaatgt gcagggtttg taattcggag
     2041 acgtgcataa taatgatgta ttttgaagag gaaaaagaca ggcagatgcc gtctgaaaga
     2101 agaagctgac cgttgccggt tgctcgggga agggggaatt gtaggcagtc ggcgcgtggg
     2161 tgtcaaatat tatcgcggac ggggcatcgg caggaaatgc cgtctgagcg gagctgcttg
     2221 gaaaaaaata cccccgcgct tttcaggctc gggggtatgg gcattgatta tttgttcaat
     2281 tcattcgcca aatatagcca agtttcgatg acggtatccg ggttcaggga aacgctttca
     2341 atgccttcct caaccagcca tttggcgaag tccggatggt cggacgggcc ttgaccgcag
     2401 atgccgacat atttgttctg cttgcggcag gcggagatgg caaggtgcag catcactttg
     2461 acggcagggt tgcgttcgtc aaacgattcg gataccaagc cgctgtcgcg gtcgagaccg
     2521 agggtcagtt gggtcatgtc gttcgagccg atggagaagc cgtcgaagta ttgcaggaat
     2581 tgttccgcca ataccgcgtt gctcggcagc tcgcacatca taatcaggcg caggccgttt
     2641 ttgccgcgtt ccaagccgtt ttctttcagg gctttgacaa cggcttcggc ttcgcccaaa
     2701 gtgcggacga acggaatcat gatttcaacg ttggtcaacc ccatttcatc gcggacgcgt
     2761 ttcaaggctt tgcattccaa ggcgaaacag tctttgaagt tgtcggcgac ataacgcgcc
     2821 gcaccacgga agcccaacat cgggttttct tcatgcggtt cgtatacgtt gccgccgacc
     2881 aggttggcgt attcgttgga tttgaagtcg gacatacgga cgatggtttt acgcggataa
     2941 accgatgcgg ccaatgtcgc cacgccttcg gcgattttat cgacgtagaa gtcgacaggg
     3001 gacgcgtaac cggcgatacg gcgggtaatt tccgctttta attcgtcgtc ttgtttgtca
     3061 aattccaaca aggctttggg gtggataccg atttggcggt tgatgataaa ttccatacgc
     3121 gccaagccga tgccttcgct gggcaggttg gcgaagctga atgcgagttc gggattgccg
     3181 acgttcatca tgacttttac aggtgcttta ggcatgttgt ccaaagcaac atcggtaatt
     3241 tgtacgtcca gcaggccgga gtagatgaag ccggtatcgc cttcggcaca ggatacggta
     3301 acttcttgac cgtttttcag caattcggtt gcattgccgc agccgacaac ggcaggaata
     3361 cccagttcgc gcgcgatgat ggcggcgtgg caggtacgtc cgcccctgtt ggtcacgatg
     3421 gcggaagcgc gtttcatcac cggttcccaa tctgggtcgg tcatgtcggt aaccagtacg
     3481 tcgccggctt cgacggaatc catctcggaa gcatctttaa tcaggcgtac cttgccctga
     3541 ccgactttct gaccgatggc gcggccttcg cacaagacgg ttttttcgcc gttgatagaa
     3601 aagcggcgca ggttgcggct gccttcttcc tgggatttga cggtttcggg acgggcttgc
     3661 aggatgtaga gtttgccgtc caagccgtcg cgtccccatt cgatgtccat cgggcggccg
     3721 tagtgttttt cgatggtcag tgcgtaatgc gccaactcgg tgatttcttc gtcggtaatg
     3781 gagaagcggt tgcggtcttc ttcggggaca tcgacgttgg ttaccgattt gccggcttct
     3841 gctttgtcgg taaaaatcat tttgatgtgt tttgagccca tggttttgcg caggatggca
     3901 ggtttgcctg ctttcagcgt gggtttgaac acatagaatt cgtcgggatt gactgcgcct
     3961 tgtacgacgt tttcgcccag accgtaggat gaagtgacaa agacgacttg gtcgtaaccg
     4021 gattcggtat cgagggtgaa catcacgccg gacgcgccgc tgtcggaacg caccatacgc
     4081 tgcacgccgg cggaaagggc gacgatgtcg tgttcgaagc ctttgtggac gcggtaagaa
     4141 atggcgcggt cgttgtacag ggaggcgaat acatggcgca tcgcttcttt aacgttttcc
     4201 aagccgttga tattcaggaa ggtttcctgt tggccggcaa atgatgcgtc gggcaggtct
     4261 tcggcggttg cggaagagcg tacggcaacg gaaatgtccg cgccgccggc atcggcaacc
     4321 attttgttcc atgccgcttc gatttcggca tcgagctgtt cggggaaggg cgtgtccaaa
     4381 atccattggc ggatttcttt gccgacgcgt gccagttcgg caacgtcttc gacatctaat
     4441 tttgccagtg cggcggaaat gcgttcgctc agaccgttgt gtgcgaggaa tgcgcggtag
     4501 gcatcggctg tggtggcaaa gccgccgggg acgcgaacgc ctttttcggt cagctgactg
     4561 atcatttcgc ccagcgaggc gtttttaccg cccacgcgtt caacatctgt catacgcagg
     4621 ttttcaaacc aaattacgta gttgtcggcc atttgtgtgt ccaatccaaa atatgttaaa
     4681 aaagaaacaa atccgcgtgc ttattttaag cgattcgttc ctctgctgtc atgtgtttta
     4741 tccgttttaa aatcatgatg ccgtctgaaa aattgcggtt tcggcgtgtg tagcggtttg
     4801 aaacttgcag ccggtatact tctttttttg ggtattttct ttgtaaaaca ggtggtttga
     4861 ataggttaat gttttttctg tttgattttt ttgtttattt tttaaaattt tctgccaaaa
     4921 aatactttat ataaataatt ttatttcaaa attatattgt gtctgtttgg gtgtaatccg
     4981 aggtaggtgt gctgcgagtg ctttccttgt gtctgccgct gctgttatga tgggatttta
     5041 aacctgtgtt ttaaggatgg aagatgagca gtccgcgcca tgtgttttac atttccgacc
     5101 gtaccggtct gactgccgag aatatcggcg aggctttgct gaaccagttt ggcaatctgt
     5161 cgttcaaacg ccatacgcat ccgtttgtcg atacgccgga aaaggcgcgc gcggtggtgg
     5221 agaaggtcaa tcggagccgg caggaaaacg gtcagcgtcc gattgcgttt gtcagtgtgg
     5281 ttgatgacga aatccgtcgg attatcaaag gggcggatgc ttttcagatt aatttctttg
     5341 agactttttt gggactgttg gagaaagaac tcaataccga agccacggca tccgagcagg
     5401 ggcatcacag tatcggtaat acgaagcgtt acgatgcgcg tatggaggcg gtgaatttct
     5461 cattgaacca cgatgacggg gtcagcgata agaaccttca ggaagcggat gtaatcttga
     5521 tgggtgtatc gcgttcgggc aaaacgccga cctgccttta cctcgccctg caatacggca
     5581 tccgtgcggc aaactatccg ctgattcccg acgatttgga atcggccgat ctgccgcgta
     5641 tggtcaagcc ttatagggat aagctgttcg ggttgaccat ccagccggaa cgtttgcagg
     5701 ccatccgcca agagcgccgc ccgaattcaa cttatgccaa aatcgataca tgccgcagcg
     5761 aggtggcgga cgcgcagagt atgttcagac ggcatgggat tccgtttgcg aatacgacgg
     5821 ataaatcagt ggaagagctt gccgtacaca tccttcaggc gtgcaagctc aaacgcaggt
     5881 tttgacgggt tttgattcgg tttgaaggtg gaactgccgt ctgaaatcag gtttcagacg
     5941 gcagt
//
LOCUS       DAXHKG010000114         5929 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.114, whole genome shotgun sequence.
ACCESSION   DAXHKG010000114 DAXHKG010000000
VERSION     DAXHKG010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.114"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            55..1593
                     /gene="murJ"
                     /locus_tag="ACFMWP_001679"
     CDS             55..1593
                     /gene="murJ"
                     /locus_tag="ACFMWP_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HFC5892248.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPS
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLWAAQACLPFEWVRAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            1726..2682
                     /locus_tag="ACFMWP_001680"
     CDS             1726..2682
                     /locus_tag="ACFMWP_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HFC5892249.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSGSHYAVELMLAVRDRGWNGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGERGENALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHAGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            2733..3515
                     /gene="trpC"
                     /locus_tag="ACFMWP_001681"
     CDS             2733..3515
                     /gene="trpC"
                     /locus_tag="ACFMWP_001681"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HFC5892250.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRADNIEAEVGKLF"
     gene            3581..5881
                     /gene="recQ"
                     /locus_tag="ACFMWP_001682"
     CDS             3581..5881
                     /gene="recQ"
                     /locus_tag="ACFMWP_001682"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HFC5892251.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMAGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGAELSDKEWRSVIRQCISLGYLTVNIARYQALQLTEAAKKVLKGETEVMLRPLK
                     RGKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QNLNGLHDIYGLGEAKTERFGHGILEVCRNAAGFSRDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLADTPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDETAKHKRRLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT         1293 a         1762 c         1618 g         1256 t
ORIGIN      
        1 aaagtctgat cctgccgccc taaagggcgg ggtttcaacc gaaaaggaaa tacgatgaat
       61 atgctgggag ctttggcaaa agtcggcagc ctgacgatgg tgtcgcgcgt tttgggattt
      121 gtgcgcgata cggtcattgc gcgcgcattc ggcgcgggca tggcgacgga tgcgtttttt
      181 gtcgcgttca aactgcccaa cctgcttcgc cgcgtgtttg cggagggggc gtttgcccaa
      241 gcgtttgtgc cgattttggc ggaatataag gaaacgcgtt ctaaagaggc gacggaggct
      301 tttatccgcc atgtggcggg gatgctgtcg tttgtgctgg tcatcgttac cgcgctgggc
      361 atacttgccg cgccttgggt gatttatgtt tccgcacccg gttttgccaa agatgccgac
      421 aaatttcagc tctccatcga tttgctgcgg attacgttcc cctatatctt attgatttca
      481 ctttcctctt ttgtcggctc ggtactcaat tcctatcata aattcagcat tccggcgttt
      541 acgcccacgt ttctgaacgt gtcgtttatc gtattcgcgc tgtttttcgt gccatatttc
      601 gatcctcccg ttaccgcact ggcatgggcg gtttttgtcg gcggcatttt acaactcggc
      661 ttccaactgc cctggctggc gaaactgggt tttttgaaac tgcccaaact gaatttcaaa
      721 gatgcggcgg tcaaccgcgt catgaaacaa atggcacctg cgattttggg cgtgagcgtg
      781 gcgcagattt ctttggtgat caacacgatt ttcgcgtctt atctgcaatc gggcagcgtt
      841 tcatggatgt attacgccga ccgcatgatg gagctgccca gcggcgtgct gggggcggca
      901 ctcggtacga ttttgctgcc gactttgtcc aaacactcgg caaaccaaga tacggaacag
      961 ttttccgccc tgctcgactg gggtttgcgc ctgtgtatgc tgctgacgct gccggcggcg
     1021 gtcggactgg cggtgttgtc gttcccgctg gtggcaacct tgttcatgta ccgcgaattc
     1081 acgctgtttg acgcgcagat gacgcaacat gcgctgattg cctattcttt cggtttaatc
     1141 ggtttgatca tgattaaagt gttggcatcc ggcttttatg cgcggcaaaa catcaaaacg
     1201 cccgtcaaaa tcgccatctt cacgctcatc tgcacgcagt tgatgaacct tgcctttatc
     1261 ggcccactga aacacgtcgg actttcgctt gccatcggtc tgggcgcgtg tatcaatgcc
     1321 ggattgttgt tttacctgtt gcgcagacac ggtatttacc aacctggcaa gggttgggcg
     1381 gcgttcttag caaaaatgct gctctcgctc gccgtaatgg gcggcggact gtgggcggcg
     1441 caggcttgcc tgccgtttga atgggtacgc gccggcggaa tgcggaaagc ggggcagctc
     1501 tgcatcctga ttgccgtcgg cggcggactg tatttcgcat ctctggcggc tttgggcttc
     1561 cgtccgcgcc atttcaaacg ggtggaaagc tgaccgatgc cgatatcctt tttcggaaaa
     1621 cgctttttcc gcgcctatat tcgggcgcgc atcccccacg tccgcaccag ccggacgggc
     1681 tgccgcatca tcaatgccgt ctgaaaacaa gaaaaccgat accttatgat tttaacaccg
     1741 ccggacacgc cctttttcct ccgcaacggc aatgccgaca cgattgccgc caaattcctg
     1801 caacgccccg cacctgcata ccgccgcgag ctgcttccag acagcacggg taaaaccaaa
     1861 gtcgcctacg acttttcaga cggcatttcg cccgacgcac cgctggtcgt gctgtttcac
     1921 ggtttggaag gaagcagtgg cagccattac gcggtcgaac tgatgctcgc ggtacgcgat
     1981 cgcggttgga acggcgcagt cgtccatttc cgcagctgcg gcggcattgc caacaccgct
     2041 ccggtgttct accacttggg cgataccgcc gaaatcgcct ttactttgga cacgcttgcc
     2101 gcgcgttacc gtgaaatata cgccgtcggc gtatcgctgg gcggcaacgc gctggcaaaa
     2161 tatttgggcg aacggggcga aaacgcgctg ccgcaagccg ctgccgtcat ctccgcaccc
     2221 gtcgatgcag aggcggcagg cagacgcttc gacagcggca tcacgcggct gctctacacg
     2281 cgctacttcc tccgcaccct gatacccaaa gcacggtcgc tccacggttt tcagacggca
     2341 tttgccgcag ggtgcaaaac actgggcgag tttgacgacc gcttcaccgc accgctgcac
     2401 ggctttgccg accggcacga ctactaccgc caaacttcct gcaaaccgct gctcaaacac
     2461 gttgccaaac cgctgctcct gctcaatgcc gccaacgacc ccttcctgcc gcccgaagcg
     2521 ctgccgacac cggacgaagt gtccgaagcc gttaccctgt tccagccggc acacggcgga
     2581 cacgccggct ttgtcggcag caccggcggc aggctgcacc tgcaatggct gccgcagacc
     2641 gtcctgtcct atttcgacag cttccgcaca aacaggcggt aacggtttga tgctaatatt
     2701 ccccctttcc ccggacaaat acggaacacg acatgaccga catcctcaat aaaatcctta
     2761 ccgccaaggc acaggaagtt gccgctcaaa aagccgccgt caacgccgaa cacatccgcg
     2821 cacttgccgc agaagccgcg cccgtccgca gcttcatcgg ttcgatacgc ggcaaacacc
     2881 gcctaaacct gcccgccgtc attgccgaaa tcaaaaaggc aagcccgagc aaaggcctga
     2941 tccgtccgga cttccgaccg gccgagattg cacgcgccta tgaaaacgcc ggggcggcgt
     3001 gtttgtccgt actgaccgac gaaccctatt tccaaggttc gcccgaatac ctcaaacagg
     3061 cgcgcgaagc cgtatcgctg cccgtgctgc gcaaagactt catcatcgac gaatatcagg
     3121 tttatcaggc gcgcgcatgg ggggcggatg ccgtcctgct gattgccgca gcactggaac
     3181 aggaacaatt ggaacgcttt gaagcggtgg cgcacgaatt gggcatgacc gtcctgctcg
     3241 agctgcacga tgaaagcgaa ttggaaaaat gccgcaacct gaccacgccg ttgtggggtg
     3301 taaacaaccg caacctgagg acttttgaag tctccctcga ccaaaccctg tcgctgctgc
     3361 ccgcgctgga aggcaaaacc gtcgttaccg aaagcggcat tacaggcaag gcggatgtgg
     3421 aatttatgca atcgcgcggc gtgcatacct tcctgatcgg cgaaacgttt atgcgtgccg
     3481 acaatattga ggcggaagta ggcaaactct tctaaatccc gatttcagac ggcattccct
     3541 ttctttaacc gacacaccct ttaccggaca cggaaccatc atgcaccgac cgaccgccaa
     3601 acagattctg cacgaagtat ttggttatcc cgaatttcgc ggcaggcagg aggctgtcat
     3661 caatactttg gcaggcggcg ggagtttgac ggtgctgatg ccgacgggcg ggggcaagtc
     3721 tttgtgttac cagattcccg cgctgatgcg cgaaggcgtg gcggttgtcg tatcgccgct
     3781 gattgcgctg atgaacgacc aagtggccag cctgcatgtg gccgggattg aagcagcggc
     3841 agtcaacagc ggcacatcgg cagatgaggc gcgcgagatt gccgacaagc ttgcccaagg
     3901 ccgtctgaaa ctgctttatg tcgcgccgga acgcttggtt accgatcgct ttttgcgttt
     3961 tctcgaccaa caaaccgtca gcctgtttgc cattgatgag gcgcattgcg tcagccagtg
     4021 gggacacgat ttccgccccg aataccaaca gctcggcatg cttgccgaac gctatccgaa
     4081 cgtcccgcgc atcgccctga ccgccaccgc cgatgccgcc acgcgcgccg acatcaagca
     4141 ttatctgcac ttggacgatg cgcccgaatt tatttccagc ttcgaccgcc cgaatattta
     4201 ttatcaggtt atcgaaaaaa acaacggcaa aaaacaactg cttgaattta tccgcaaaga
     4261 aatggcgggg caaagcggca ttgtgtattg cctaagccgc aaaaaggttg aagatgtggc
     4321 gcagtttttg cgtgaaaacg gattaaacgc gattccgtat catgctggtt tgagcatgga
     4381 cgtgcgcgag gaaaaccaac gccgctttac gcatgaagac aatattatcg tggtggcgac
     4441 cgtggcgttc ggcatgggca tagacaaacc cgacgtgcgc tttgtcgccc atctcgatat
     4501 gccccagagt gtcgaacatt tctatcagga atcggggcgt gccggcaggg acgggctgcc
     4561 tgccgcgagc tggctgtgtt acggcttgaa cgattgggtg ttgctgcgcg aacggattgc
     4621 cgaaggcaac agcgatgagg tgcaaaagca aatcgaaatg caaaaactcg atgccatgct
     4681 ttccgtctgc gaaaccgccg cctgccgccg cgtactgttg ctcaaacatt ttggcgaaga
     4741 atccgaaccc tgcggccatt gcgacaactg cctgcatccg cctgtgcggt ttgacggcac
     4801 ggtgttggta caaaaattac tcagctgcgt gtaccgcgcc ggacaacgtt ttgccgccgg
     4861 ttacatcacc aaccttttgc gcggtaaaag cgacgattgg atacgcggca accggcacga
     4921 acaactgtct accttcggca tcggtgcgga gttgtccgac aaagaatggc gcagcgtcat
     4981 ccgccagtgc atcagcctcg gctacctcac cgtcaacatt gcccgatatc aggcattgca
     5041 actgaccgaa gccgccaaaa aagtcctcaa aggcgaaacc gaagtgatgc tgcgtccgct
     5101 caagcgcggc aagcccgccg cccgcaccct caaagacaac tggctgcgta ccgaacgcga
     5161 agaacgcctg tggcaggcat tgcgcgtttg gcgtatgaaa caggcagaag ccgaaggcat
     5221 ccccgcctat atgattttcg gcgacaaaac cctgcgcgac cttgtcgaaa aaatgccgca
     5281 aaacctcaac gggctgcacg acatctacgg cttgggcgaa gccaaaaccg aacgtttcgg
     5341 acacggcata ctcgaagtct gccgcaacgc cgccggcttc agccgcgacg cggtcatccg
     5401 tccgcaaacc gaacgcgaac aacaactgcg tcaaaaactc gaggcctggc ggtatgaaca
     5461 ggcaagggcg gaaaactgcg ccctgcatgc cgtcctctcc gacgaaagcc ttgccgatat
     5521 gcttgccgat acgcccgaaa ccgaaaccga cctcgaaggc gtacacggct tgggcagcgt
     5581 acgcgccgcc aaatacggac gggacatcct cgccgtctgc cgtccgtttt cagacggcat
     5641 cgatgaaacc gccaaacaca aacgccgcct gatgcgcgcc ctgatccaat ggtgcaacga
     5701 aacggcaaaa cacgaacagt ccgaacccta ccgcattctc agcaaagccg ccctacgcgc
     5761 cattgccgcc aaacagccgg aaggtttggc ggagcttgcc gccgtatatg gcgtaggcga
     5821 agaaaaagcc gcacgttacg gtgcggcggt gttggcggta ttggaacgaa atgccgtctg
     5881 aaaaccgtta ccaagtttca gacggcattg cctctattta aaaattcct
//
LOCUS       DAXHKG010000115         5928 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.115, whole genome shotgun sequence.
ACCESSION   DAXHKG010000115 DAXHKG010000000
VERSION     DAXHKG010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5928
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.115"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            309..1256
                     /locus_tag="ACFMWP_001683"
     CDS             309..1256
                     /locus_tag="ACFMWP_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HFC5892252.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVALHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1408..2532)
                     /gene="rluD"
                     /locus_tag="ACFMWP_001684"
     CDS             complement(1408..2532)
                     /gene="rluD"
                     /locus_tag="ACFMWP_001684"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HFC5892253.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTLWIKEGAVIVNDKPSQPKDKMIGGEQIRVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWRGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLTHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCSDPVKEAVKSLGSRQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2531..3334
                     /locus_tag="ACFMWP_001685"
     CDS             2531..3334
                     /locus_tag="ACFMWP_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HFC5892254.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3392..5611)
                     /locus_tag="ACFMWP_001686"
     CDS             complement(3392..5611)
                     /locus_tag="ACFMWP_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HFC5892255.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTAVRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVAAAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRIRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         1436 a         1868 c         1426 g         1198 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat atgtttcaac aggggatggc
       61 acatcaagca ccgcactgcg tgttgcccga acgagactac cctccgatta gattctatcg
      121 ctataaacag acgggtttca accgaaaagg aatggggata aagtccattt ctgacacctc
      181 tcgggcgatg ccgtctgaaa accaatctcc actttcagac ggcattgttt aggcacggtc
      241 attttgcaaa ttaaggttaa ggcgtgtatg cttgccttcc cttaaaaaca aacacgcaac
      301 gcattattat gaatatcctc agtaaaatca gcagctttat cggaaaaaca ttttccctct
      361 gggccgcgct ctttgccgcc gccgcttttt tcgcgcccga caccttcaaa tgggcggggc
      421 cttatattcc ttggctgttg ggcattatta tgttcggtat gggtttgacg ctcaaacctt
      481 ccgacttcga tattttgttc aaacatccca aagccgtcat catcggcgta atcgcacaat
      541 tcgccattat gccggcaacc gcctggctgc tgtccaaact gttgaacctg cctgccgaaa
      601 tcgcggtcgg cgtgattttg gtcggctgct gcccgggcgg tacggcttcc aatgtgatga
      661 cctatctggc gcgtggcaat gtggctttgt cggttgccgt tacgtctgtt tccaccctga
      721 tttccccatt gctgactccc gccatcttcc tgatgcttgc cggtgaaatg ctggaaatcc
      781 aagcggccgg tatgttgatg tccatcgtca aaatggtttt gctccccatt gttttgggtt
      841 tgattgtcca taaggttttg ggcagtaaaa ccgaaaagct gaccgatgcg ctaccgctgg
      901 tttccgttgc cgccatcgtg ctgattatcg gcgcggttgt cggggcaagc aaaggcaaga
      961 ttatggaaag cggcctgctg atttttgccg ttgtcgcact ccacaacggc atcggctacc
     1021 tgctcggctt ctttgccgcc aaatggaccg gcctgcctta tgatgcacaa aaaacgctgg
     1081 ccatcgaagt cggtatgcaa aactcggggc tggccgccgc gcttgccgcc gcacactttg
     1141 ccgctgcgcc ggtcgttgcc gttccgggcg cattgttcag cgtgtggcac aatatctccg
     1201 gctcgctgct ggcaacttat tgggcggcca aagccggtaa acataaaaaa ccctaaacgc
     1261 ctttcatcat aatgccgtct gaacggggca aacgaaaccg gcggtttctg cccgacccct
     1321 tcagacgcct ttgtttgaaa tcggcgggga cgattatccg gctgctccga ttcggctacc
     1381 tgcgttcgcc ccgcctttca agccacctca ctccctcaca taaaccactt cgacatcgta
     1441 gtcgtcttcg ttccaatcgt catcgtcgtc cgcgccgaat ttgtcctgcc attcctcttc
     1501 attgctcaaa gacgaatcca aaccggcttc aagacggagg acggacaaca aatgatatat
     1561 gtcgtccgga atcggtgcct caaacgaaac ggtttcgccg ctttccggat gggtgaaact
     1621 caagcggtag gcgtgcaatg cctgacgcga gcccaaactt ttaacggctt ctttcaccgg
     1681 gtcgctgcac ggatggcgcg ggttgccgta cacgggatcg ccggcaagcg gatggttggc
     1741 ctcgcgcata tggacgcgga tttggtgcgt cctgcccgtt tcgagcgagc attcgatata
     1801 gctgtgggta agatagcgtt ccaacacttt gacgtgggta acggctggtt tgccgccgaa
     1861 tttgacgact gccattttca ggcggttgtg cggatcgcgt ccgatttggg tttcgatttt
     1921 accgtcgaag gggacgatgc cgttggcgac ggcgcggtag atgcgtttga ccgtgcgctc
     1981 ttgaagctgc ctcacgaggg aattttgcgc cggcagggtt ttggcaacca ccatcagccc
     2041 gctggtttct ttgtccaaac ggtgtacgat gcctgcacgc ggtacttggc tcaattcggg
     2101 acagtgcgcc aacaggccgt tgagcagcgt ccccctccag ttgcctgccg ccggatgcac
     2161 caccagtccg gccggtttgt tgacgacaat gacggtatcg tcttcgtaaa caatatccaa
     2221 agccataggc tctggaacaa acgccagatt ttcctcactc ggacggacgg ttacacggat
     2281 ttgctcaccg cctatcattt tgtctttggg ttgcgaaggt ttatcgttta caataaccgc
     2341 gccctcttta atccataatg tcaggcggct gcgcgaatag tcgggcagaa gtttcgccaa
     2401 caccgcatcc aaccgcccgc cggcaagctc gagcggaacg gtcagaccga tacggttttc
     2461 agtttcggaa gctgacgcaa agtctgaatc gtcgctataa tcggattcat tatcaaagga
     2521 agtattctgc atgaaaaaaa ttcttttaac ggtttcatta ggtttggcac tgagtgcctg
     2581 tgccactcaa ggtacggtcg ataaagatgc ccagattacc caagattgga gtgtggagaa
     2641 gctctatgcc gaagcccagg acgaattgaa cagcagcaat tatacgcggg ctgtcaagtt
     2701 atacgaaatc ttggaatcgc gcttccccac cagccgccat gcccggcagt cgcaactgga
     2761 taccgcatac gcctattata aagacgatga aaaagacaaa gctctggcgg caatcgaacg
     2821 cttccgccgc cttcacccgc aacacccgaa tatggattac gcgctatacc tgcgcggttt
     2881 ggtactgttc aacgaagatc agtctttctt gaacaagctg gcctcgcaag actggtccga
     2941 ccgcgacccg aaagccaacc gcgaagcgta ccaggcgttt gcggaactcg tccaacgctt
     3001 ccccaacagc aaatacgccg ccgatgcgac cgcacgtatg gtcaaactgg tcgatgcact
     3061 gggcggcaat gaaatgtcgg tggcgcgcta ctacatgaaa cgcggtgcat atatcgccgc
     3121 cgccaaccgc gcccaaaaaa tcatcggcag ctaccagaat acgcgttatg tcgaagaatc
     3181 gctcgccata ttggaacttg cctaccaaaa actcggcaaa ccacagcttg ccgccgatac
     3241 gcgccgcgtg ttggaaacca acttcccgaa aagcccgttt ttgacgcacg cttggcagcc
     3301 cgacgatatg ccctggtggc gttactggca ttaagcccat cttcgtaatg ccgtctgaag
     3361 ccgtttcaga cggcatttta tgtttcaaac ctcattcaaa cggttttttc tgccaataga
     3421 atttataccc tctcaaacgt tgagccttca cgccgccgcg ccccaagccg aattgcagcg
     3481 cgcccgacaa atcggtacgc aacaatttga tgccgtgtgc acggatacgg ttttgcaccg
     3541 cttcggtcgg atgtttgtag gcgttggcat aaccgcttga agcaacggca tattcgggcg
     3601 agacggcatt gaggaacacg cccgacgagg acgtattgct gccgtgatgt cccaaaacca
     3661 aaacctggct gtacaggttg cctccatact tgccgaccag gctttcctcg cccttcgtat
     3721 ccaaatcgcc cgttaccagc agtgccgcac cgcccgccac aacacgcaaa acacaacttt
     3781 tcccattatc atcgatgttt ttgcgttcag acggcatcaa aaactcaaaa tccacgccgt
     3841 cccattgcca acgctgttcc gcacaatgcc gcgccccctc ataaaattcc ggctgcccgg
     3901 cataaatccc gccgttcggt atcttgccga ctgcctgaaa accgccgtcg tggtcgctgt
     3961 cgtgatgcga cagaaccagc ttgtccaaac ggcggacacc cgccgcattc aaactcggca
     4021 caatccccat ctgcgccgcc gctgccgttc cggtgtcaaa caaaagatga tgatttgccg
     4081 tctgaaccga caccgacaaa ccctgccccg catcccaaac cgtaaccgca acctcatttt
     4141 ccggcacgcc gggtgaacgg taaaacacaa accctgccaa cagcaacacc gcccacggac
     4201 gcaaacccaa gccgcgcggc agcagcaaca gcaaagcggc acacaccgcc aacaccaaca
     4261 gcggcaaagg tgcggcggca acggcaaact cgggcgacac atcggcaagc cacaccaaaa
     4321 accgcaaagt atattccgcc aaaaatgccc ccaactgttg caaaggcgca aacggcacga
     4381 ccgaacccag caacgccagc ggcgtcaata cccaagaaaa ccacggaatc gccaccgcat
     4441 tgaccaaagg gctgattaaa ggcagcgaag caaacagata accgagcaaa accagcgaca
     4501 acaccgaagc cgcccactgc ccgcgcacgg cggtttgccg tttcccttcg tgcaaacgcc
     4561 ccgaacacgc ccatatcagg gccgccacca aaccgaaaga cagccaagtc cccacaccca
     4621 agaccgccga cgggtcgaac agcagcaccg ccgccaacgc ctgccaccac gtcgcccacg
     4681 ccgacaatct tcccctgcgc caagcccacg caaacgccgc caacatcaaa acgctgcgct
     4741 gcgtcggcac ggaaaaaccg gcaagcagcg cgtaaaacag cgcgcctgca caccccgccg
     4801 ccaaaaccca cgcacgcggc cgggcaggaa ggcgcgggga acaggcaagc agccgcttcg
     4861 ccagccacgc aaacattacc gccaccatcg taacgtgcaa acccgaaata ctgaccaaat
     4921 gcgtcagccc caacggccgg aacgcctgcc acaattcggg gcgcaatgcc gactgttcgc
     4981 ccacgctcaa cgcgcgcatc agcccgatgc cgtctgaaag cccgccgtcc gcatccgcct
     5041 gctgccaatt acggctgatg cggctgcgcc aaaccgcaat cccccaaccg cttccgccat
     5101 gcagcaaaac cctgtccgca ccgaccgtcc ccgcgccgcc tatcccgttg gataatgccc
     5161 acgcctcacg gttcaaaccg cgcaggttca attcgccgac gacggggtgc acacgtgccg
     5221 ttatccgcca tctgctcccg accgcccatt cgcgccgttt gtagtccgac agcagcaaat
     5281 caaacgtccg accaccgctg tccacagcct ttgccgcaaa ctgcacgcgc cgcccgtccg
     5341 acctcggcat atccgccact tccaccgtca acggcacacc tgaaaccgcc tccgcccgcc
     5401 attgcgaaga cagtgccgct tccgttctga atacgccgta agccgcgccc gccaacacgc
     5461 acagcatcag accggcaaac gcaaaacgcc ttgcaaacac agcaaaaacc gcaaaagccg
     5521 ccagccaaaa cagccaatgc ggcacgaccg gcagcgcaaa cgaagccgcc gcgccgacaa
     5581 cccaacacgg caaaaaccaa cgacggaaca cgtctcccca ccccagatat ttcaaaaata
     5641 aacggataat aaagcaaatc cgaaaaaccg tcataacaag atttgaaaat gatatagtgg
     5701 tttaaattta aatcaggaca aggcgacgaa gccgcagaca gtacaagcag tacgacaagg
     5761 cgaggcaacg ctgtactggt ttttgttaaa ccactataag aatgcaaacg aaaagcctca
     5821 gtattatcct agacaacggc aaactttcca tcgtcattcc cgcacaagcg ggaatccaaa
     5881 cttgtccgca cggaaactta tcggataaaa cggtttctta gattccac
//
LOCUS       DAXHKG010000116         5827 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.116, whole genome shotgun sequence.
ACCESSION   DAXHKG010000116 DAXHKG010000000
VERSION     DAXHKG010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.116"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(1040..3766)
                     /locus_tag="ACFMWP_001687"
     CDS             complement(1040..3766)
                     /locus_tag="ACFMWP_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HFC5892256.1"
                     /translation="MQQQHLFRLNILCLSLMTALPVYAENVQAEQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKSSDTLSKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGVSQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSS
                     EYGNGALAGSVAFQTKTAADIIGEGKQWGIQSKTAYSGKDHALTQSLALAGRSGGAEA
                     LLIYTKRRGREIHAHKDAGKGVQSFNRLVLDEDKKEGGSQYRYFIVEEECHNGYAACK
                     NKLKEDASVKDERKTVSTQDYTGSNRLLANPLEYGSQSWLFRPGWHLDNRHYVGAVLE
                     RTQQTFDTRDMTVPAYFTSEDYVPGSLKGLGKYSGDNKAERLFVQGEGSTLQGIGYGT
                     GVFYDERHTKNRYGVEYVYHNADKDTWADYARLSYDRQGIDLDNRLQQTHCSHDGSDK
                     NCRPDGNKPYSFYKSDRMIYEESRNLFQAVFKKAFDTAKIRHNLSINLGYDRFKSQLS
                     HSDYYLQNAVQAYDLITPKKPPFPNGSKDNPYRVSIGKTTVNTSPICRFGNNTYTDCT
                     PRNIGGNGYYAAVQDNVRLGRWADVGAGIRYDYRSTHSEDKSVSTGTHRNLSWNAGVV
                     LKPFTWMDLTYRASTGFRLPSFAEMYGWRAGESLKTLDLKPEKSFNREAGIVFKGDFG
                     NLEASYFNNAYRDLIAFGYETRTQNGQTSASGDPGYRNAQNARIAGINILGKIDWHGV
                     WGGLPDGLYSTLAYNRIKVKDADIRADRTFVTSYLFDAVQPSRYVLGLGYDHPDGIWG
                     INTMFTYSKAKSVDELLGSQALLNGNANAKKAASRRTRPWYVTDVSGYYNIKKHLTLR
                     AGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMKF"
     gene            complement(3853..5652)
                     /locus_tag="ACFMWP_001688"
     CDS             complement(3853..5652)
                     /locus_tag="ACFMWP_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC5892257.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVETVQDMHSKPK
                     YEDEKSQPESQQDVSENSGAAYGFAVKLPRRNAHFNPKYKEKHKPLGSMDWKKLQRGE
                     PNSFSERDELEKKRGSSELIESKWEDGQSRVVGYTNFTYVRSGYVYLNKNNIDIKNNI
                     VLFGPDGYLYYKGKEPSKELPSEKITYKGTWDYVTDAMEKQRFEGLGSAAGGDKSGAL
                     SALEEGVLRNQAEASSGHTDFGMTSEFEVDFSDKTIKGTLYRNNRITQNNSENKQIKT
                     TRYTIQATLHGNRFKGKALAADKGATNGSHPFISDSDSLEGGFYGPKGEELAGKFLSN
                     DNKVAAVFGAKQKDKKDGENAAGPATETVIDAYRITGEEFKKEQIDSFGDVKKLLVDG
                     VELSLLPSEGNKAAFQHEIEQNGVKATVCCSNLDYMSFGKLSKENKDDMFLQGVRTPV
                     SDVAARTEANAKYRGTWYGYIANGTSWSGEASNQEGGNRAEFDVDFSTKKISGTLTAK
                     DRTSPAFTITAMIKDNGFSGVAKTGENGFALDPQNTGNSHYTHIEATVSGGFYGKNAI
                     EMGGSFSFPGNAPEGKQEKASVVFGAKRQQLVQ"
BASE COUNT         1377 a         1488 c         1287 g         1675 t
ORIGIN      
        1 gttcccacgg tcaggatttc agattgcgga catctgtcag aaaagacaaa aaaccttccg
       61 ccgtcattcc ctacaggcga gaatccgatc cgttgaaatt cggttgtttt aaataaattc
      121 ttacagcttt gattttctgt ttttccgata acgccgtaac tttgaaacgc gaaagcggta
      181 atccgatccg ttgggatttt gcaacttcaa atcaatccgc aaactgaaat cccgtcattc
      241 ccgcgcagtc gtgaatccga acgcgtccgc acgaaaacct gcatcccgtc attcccacgg
      301 aagtgggaat ctaggacgta aaatctcaag aaaccgtttt atccgataag tttccgcacc
      361 gacagacctg gattcccgcc tgcgtgggaa tgacgaaatt tcagcgagcc gtagggtggg
      421 ctgtagggtg ggcttcagcc caccaatttc accgcatcaa aggtttttgg gaatacggcg
      481 gtttcggttt tcggtgggaa tgggcggaat ggataacatt gacggagttg ggggaatagg
      541 tggaaacggt gggattggtg ggctgaagcc caccctacag ccagccctat gtccacgctg
      601 cacatcctac gcccgccttg cgtttcttat aagcagcatt ttacgcaata ctttgcgtcc
      661 gctgaaaaaa tttcaaacgg tcttttttat caaatgcgaa aaatataacg tcattcccgc
      721 gcaggcggga atctagtctg tcggtgcgga aacttatcgg ataaaacggt ttctttagat
      781 tttacgccct agattcccgc ctgcgcggga atgacgggat ttgaggtttc tgtttttgat
      841 tttccgcctt cgcgggaatg acggtttaga agttacccga aacctcaaaa aaaaccgaaa
      901 ccgaacggtc tggattcccg cctgcgcggg aatgacgggt ttcgagatta cggtgtatcg
      961 gggatgatgg gaaacggtgg gaattgtgta aaaaatgccg tctgaagcct ttcagacggc
     1021 atttgcggcg tttggacgtt taaaacttca tttccaagct aaatgtgtag tttcggccgg
     1081 gggcggcata tcggttgtaa acgccgacat ttttgtgttg gttgactgcg ccgccggcag
     1141 tttgccgcac attttcccaa gtaacatagc ggtagttgag gaggttgtac acacctgcgc
     1201 gcagggtcag gtgtttcttg atattgtaat atccggaaac atccgtaaca taccaaggcc
     1261 gcgtccgccg tgatgctgct tttttagcat tggcattacc gttcaacagc gcctggctgc
     1321 cgagcagttc gtcaacagat tttgccttgg aataagtaaa catcgtattg atgccccata
     1381 ttccgtcagg atggtcgtaa cccaaaccca atacatatcg tgaaggttgg acggcatcaa
     1441 agagatatga agttacaaac gtcctgtcgg cgcgtatatc ggcatctttg accttgatac
     1501 ggttataggc aagcgtggaa tacaacccgt ccggcaaccc gccccatacg ccgtgccaat
     1561 cgattttacc caaaatattg ataccggcta tccgtgcatt ttgggcattt cggtatccgg
     1621 ggtcgccaga agccgaagtt tgcccgtttt gagttcgggt ttcataaccg aatgcaatca
     1681 ggtcgcgata ggcattgttg aaatagctgg cttccaaatt gccgaagtcc cctttaaata
     1741 caatacctgc ctctctatta aaggattttt ccggtttcag atccaacgtt ttcaaagact
     1801 ccccggctct ccagccatac atttcggcaa acgacggcag acggaagccc gtagaagcgc
     1861 gataagtcaa atccatccag gtgaaaggtt tgaggactac gcccgcgttc caagaaaggt
     1921 tgcggtgagt gccggtagag acactcttat cttccgaatg cgtgctgcgg taatcgtaac
     1981 gtatgcctgc tccgacatcc gcccacctgc ccaaacggac attgtcttga acggctgcat
     2041 aataaccgtt gccgccgata ttcctcggtg tgcagtctgt ataggtgtta ttgccgaaac
     2101 ggcatatcgg cgatgtattg accgtggtct tgccgataga caccctatac gggttgtctt
     2161 tgcttccgtt gggaaacgga ggctttttcg gggttatcaa atcatatgcc tgaactgcgt
     2221 tttgaagata ataatcgctg tgggacaatt gcgacttaaa gcggtcgtac cctagattga
     2281 tactcaaatt gtgacggatt ttggccgtat caaatgcctt tttaaatact gcttggaaca
     2341 ggtttcggct ttcttcataa atcatccggt cggatttata gaaagaatac ggtttattgc
     2401 cgtcgggacg gcaattttta tccgaaccgt cgtgagagca atgcgtctgc tgcaaacggt
     2461 tgtccaaatc tataccttgc cggtcataag aaagtcgggc gtaatcggcc caggtatcct
     2521 tatcagcatt atggtaaaca tattcgaccc cgtagcggtt tttagtatgg cgttcatcat
     2581 aaaacacgcc ggtaccgtaa ccgataccct gcaatgtact gccctctccc tgaacaaaca
     2641 gcctttctgc cttattatcg cccgaatatt tgccaagacc tttcagcgaa ccgggtacat
     2701 aatcttcact ggtaaaatag gcaggaacag tcatatcccg tgtatcaaag gtctgctgcg
     2761 tacgttcgag aacggctccg acataatggc ggttgtccaa atgccaaccc ggtcggaaca
     2821 gccatgattg gctgccatac tcaagcgggt tcgcaagtaa gcggttggag ccggtataat
     2881 cctgcgtgct gacggttttg cgctcatctt tgaccgaggc atcttctttc agcttgtttt
     2941 tacaggccgc atatccattg tggcattctt cttcgacaat gaaatatctg tactgactgc
     3001 caccctcctt cttgtcctcg tccaacacca gccggttgaa gctctgcaca cccttgccgg
     3061 catctttatg cgcatggatt tcccgacccc gccgtttagt ataaataagg agggcttccg
     3121 cgccgccgct gcgtccggca agcgcaaggg attgcgtcag ggcatggtct tttcccgaat
     3181 aggcagtttt actctgaatg ccccactgtt ttccctctcc gataatgtcg gctgcggttt
     3241 tggtttgaaa tgcgaccgaa cctgccaatg cgccgtttcc gtattctgat gaattcgaac
     3301 ccttgctgat ttcaacggcc ttgacgtttt catactcgat ttcattgatt gcgccgctgc
     3361 tacccgccgt cctcgtccca cccaatgccg cctgcgcggt gtaggactgt atttgcgaaa
     3421 cgccgtctac cgttaaggaa acgcggtttt tatccatgcc gcgtattgaa tagccggaac
     3481 ttgcgccccg accctgttcg accacggcaa tacccggatc ataacgggtc aggtctcgga
     3541 tattcaaaac ctgttcttta cttagcgtat cggaagactt gaccaacttg cccagcccgg
     3601 ttacttcgtt atcgcggcgg gttttctgtt ttttggcttt tacctgtatg gtatccaact
     3661 gtttttcctg tgcttgttcg gcttgcacat tttctgcata aacgggcagc gcggtcatta
     3721 aagacaggca taaaatattt aatcggaaca aatgttgctg ttgcatagtg tttccctaat
     3781 cttcgctttc agacggcatc ggaaggaacg gtgccgtctg aagccttatt ctcgattgtt
     3841 cggcagccgt gcttattgca caagctgttg gcgtttcgca ccgaatacca ccgatgcttt
     3901 ttcttgtttt ccctctggtg catttcccgg aaatgagaac gatccgccca tctcgatggc
     3961 gtttttgccg tagaaaccgc cggatacagt ggcttcaata tgcgtatagt gggaatttcc
     4021 ggtattttgc ggatccagcg caaagccgtt ttcaccggtt ttcgccacac ctgaaaaacc
     4081 gttgtcctta atcatggcag taatagtaaa cgcaggagac gtacggtctt ttgccgtcag
     4141 tgtgccactg atttttttag tggaaaaatc cacgtcaaac tctgccctat taccaccttc
     4201 ctgattggag gcttcgccgc tccagcttgt gccgttggca atatatccgt accaagtacc
     4261 gcgatatttg gcgtttgcct ccgtccttgc cgccacatcg gatactggag tgcggacacc
     4321 ttgcaggaac atatcgtctt tattttcttt tgacagcttc ccaaaactca tgtaatccaa
     4381 gttggaacaa cacaccgttg ccttcacgcc gttttgctca atctcgtgct gaaatgccgc
     4441 cttattgccc tcagacggca gcagtgaaag ctccactccg tcaaccagca gctttttcac
     4501 atctccaaaa ctgtctattt gctctttctt aaactcctcg ccggtaatac ggtatgcatc
     4561 tatcacggtt tccgttgcag gccctgccgc gttttcccca tccttcttat ctttctgctt
     4621 cgcaccaaac accgctgcaa ctttgttgtc gttgctcaag aatttaccgg caagttcctc
     4681 gcctttcggc ccgtaaaatc cgccttccaa actgtcggag tcggaaataa agggatgact
     4741 tccatttgtt gcacctttat ctgccgccaa cgccttacct ttgaaacggt tgccgtgaag
     4801 agttgcttga atggtgtaac gcgtagtttt tatttgtttg ttttcactat tattttgagt
     4861 aatacggttg ttacgataaa gtgtgccctt tattgtttta tcagaaaaat caacctcaaa
     4921 ctcactagtc ataccaaaat cggtatgacc ggatgatgcc tctgcctgat tacgcaatac
     4981 cccttcttct aatgcagaca acgcccccga tttatctcct cctgctgcac tacccaatcc
     5041 ttcaaacctt tgtttttcca tagcatcagt aacataatcc caagtacctt tataagttat
     5101 cttttccgat ggcagctcct tggaaggttc tttcccttta tagtaaagat atccgtcagg
     5161 tccaaaaaga actatattat tcttaatatc aatattattt ttattaaggt aaacatatcc
     5221 cgaacggaca taagtgaaat ttgtataacc aactacacga ctttgcccat cttcccattt
     5281 tgattcaata agttcagaac taccccgttt tttttccaat tcatccctct cactaaaact
     5341 atttggttct cctctttgca gttttttcca atccattgaa cccaatggtt tgtgcttttc
     5401 cttatattta ggattaaaat gtgcattccg gcgaggtagt tttactgcaa agccataagc
     5461 cgcgccgctg ttttccgata catcctgttg gctttcaggc tggctttttt catcctcata
     5521 cttaggtttg gagtgcatat cttgcacggt ttccacgctg tccaaatcga aactgccgcc
     5581 gccacccaga caagcactca acaaaaacac aggcagcacc atagcagcct gatttaccaa
     5641 tggattgttc atataaaccc aattcaatta aagaatgata aggattatta ttttatttat
     5701 ttttaacaaa tttgcaaata cttttttatt tttttaggga atacaccaaa atcccgtcat
     5761 tcccgcgcag tcgtgaatcc gaacgcgtcc gcacggaaac ctatatcccg tcattcccac
     5821 gtatatc
//
LOCUS       DAXHKG010000117         5805 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.117, whole genome shotgun sequence.
ACCESSION   DAXHKG010000117 DAXHKG010000000
VERSION     DAXHKG010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5805
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.117"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(18..239)
                     /locus_tag="ACFMWP_001689"
                     /pseudo
     CDS             complement(18..239)
                     /locus_tag="ACFMWP_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="taurine catabolism dioxygenase TauD"
     gene            complement(238..345)
                     /locus_tag="ACFMWP_001690"
                     /pseudo
     CDS             complement(238..345)
                     /locus_tag="ACFMWP_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="ACFMWP_001691"
     CDS             complement(391..1119)
                     /gene="pdxJ"
                     /locus_tag="ACFMWP_001691"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HFC5892258.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1143..1934)
                     /gene="recO"
                     /locus_tag="ACFMWP_001692"
     CDS             complement(1143..1934)
                     /gene="recO"
                     /locus_tag="ACFMWP_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HFC5892259.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCEDADALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="ACFMWP_001693"
     CDS             complement(1968..3095)
                     /gene="pheA"
                     /locus_tag="ACFMWP_001693"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HFC5892260.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3134..4366)
                     /locus_tag="ACFMWP_001694"
     CDS             complement(3134..4366)
                     /locus_tag="ACFMWP_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HFC5892261.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYHVTPHQYAWAFALNIITMMFFNRITAWRL
                     KTGAHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(4886..5740)
                     /locus_tag="ACFMWP_001695"
     CDS             complement(4886..5740)
                     /locus_tag="ACFMWP_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC5892262.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         1354 a         1686 c         1574 g         1191 t
ORIGIN      
        1 acataatcat cgcctcaata tttaatatcc caaaatatag atttaaaacc atcgcctttg
       61 tggtttgtca gcattcctaa ttgagataga aagtcaaata atttcttgtt tctccggctg
      121 ccatcaagat ggtttagatt aagacctcga acaatacaat acccaatact ctgtactgta
      181 ttgtgaattt cttctatcaa actattattg tttgcagata aaatatactt ttgattcata
      241 tagtgaatta aatttaaacc agtacggcgt tggcttgcct tgccgtacta tttgtactgt
      301 ctgcggcttc gccgccttgt cctgatttaa atttaatcca ctataacata tccctgtcgt
      361 gaaatgctgt ctgaaagggt ttgcctgccc ttacggcagc agccttgccc tgaacatcgc
      421 ctccttcatt tggcgcacgg cttcgggcag tccgaggaag agggcttggg caatcagcga
      481 atgcccgatg ttcagttcgc ggatggcgag gatttgggcg atgggggtaa cgttgtgtat
      541 ggtcagtccg tgtccggcgt tgacgaccaa gcccaaatcg ccggcaaaat gcgcgccgtt
      601 ttgcagacgc tcgaattgct tgagttgttc ggcgtggctg cgcgcgtcgg catacgcgcc
      661 tgtgtgcagc tcgacaacgg gcgcgccgac atcataggcg gcttggattt gcctgtcgtc
      721 ggcatcgata aagagagaga ctcggatgcc tgcgtcggtc aggattttgg tgaacccggc
      781 gattttttcc tgttgcgcca atacgtccaa gccgccttcg gtcgtgattt cctgacgttt
      841 ttcaggcacg atgcacacgt cttccggcat cactttaagc gcgttttcga gcatttcttc
      901 cgtcaacgcc atttcaaggt tcaggcgcgt gcggatggcg tttttgacgg caaacacatc
      961 cgcgtctttg atgtggcggc ggtcttcgcg caggtgcatg gtaatcaaat ccgcaccgtg
     1021 cgtttcggca accagtgccg cctccacggg gctgggataa gtcgtgccgc gcgcattgcg
     1081 gacggtagcg atgtggtcga tgttgacacc taaaagcata atctttcctt ttatttctgc
     1141 cttcagacgg catttgaagc cgtgccgtcc gaagtcggga cggtttcccg ggcggtttct
     1201 ttgcggtcaa actgccgtat ctgttccaac acctgccgcg atttcagccc ctcgggcaac
     1261 aggtggcgga taaaaagccg tgtgattttc aatgcctgtt gcaggctttc ggcggtgcgg
     1321 aaactgcctt cgcgcaaatc gatcaggctt tgcccttcga caattgcgcc ggcttcgtgc
     1381 gaaagcgcgt ctgcgtcctc gcatacgggc atgaccgcct cttcgggcat cagccggtag
     1441 gttttgtccg ccaaaatatc gccgcccgtg ccgtcggcgt gcaaatcggg ggcaacgccc
     1501 aacaggttca gcagccgcca ctcgaaacgg cgcaagtcgt cgatataagc ggctttgcag
     1561 cacaccgcct ccatcacttc cgccaacgcg tcgtataact cgggcaacgg atcttcgcgg
     1621 acggtcaact tcagcatcaa ctcgttcaca tacaatccgc tgaacaaagc cctaccctgc
     1681 ggctgcggcc acccgcctat ccattcggcg cgatgtaggg tcttcaactc ttgcgaacca
     1741 taccaagacg cactcaccgg cacaaacggc accaacacgc cgcgcaattc gctctgccgt
     1801 ttgcgcgcgc ttcttgccaa aagtgccaca cgcccgtaac ggcggctgaa cgcttcgacc
     1861 cgcaggctgc tttcgcgcca gggcgaggaa gccaacagga agacgggttc gtggttgact
     1921 cggtgttcgg acatcatgcc tgaaatgccg tctgaacgct gccgccgcta caaaacggcg
     1981 gtcgggtacg aaccgatgac tttgacgaac gaagcgcgtt cgcccaagcg ttccaatgcc
     2041 gtctgaatct gcgcgtcccg gcggtgtcct tcgatgtcga tgaagaacag gtattcccac
     2101 aaaacggatt tactcggacg gctctcaaac ttggtcatgg aaatacccga ctcagtcagc
     2161 ggttgcagca gcgaggcaac cgcgcctgcc cggttgggcg cggaaacggc cagcgaagtc
     2221 ttgtcgctgc cgcttgcacc ggtttcgtga tgtcccatca ccaagaagcg cgtggtgttg
     2281 ttcggttcgt cttcgatgca ctcggcaacc atatcgagtc cgtagatttc cgccgccgtg
     2341 cgtccggcga tggcggcaac cgtaccgtcg tccgattcgg caaccagcct tgcggcttcg
     2401 gcattgctgg acacggcaat ccgttcggcg ttgggcaggt gtctgcccaa ccagtcgttg
     2461 cactgcgcca acgcctgcgc gtgggaaaag actttggcaa tgccttcggt gctgccgttg
     2521 tttttacgca aaaggttgtg gtggatgcgc aaaacgactt cgccgcacgc ctgcaacgcg
     2581 gtaacggcaa gcaaatccaa cgtgcgcccg accgagcctt cggtcgagtt ttccacgggc
     2641 gcgaccagat aatccgcctg acgggtttca acctgcttga agcagttgtc tatggtcgga
     2701 cacgccatgg tgtgcgcggc gtgtccgaaa tgcttgatcg ccgcctgctg ggtaaacgtg
     2761 ccctgcggcc ccagataggc gatggtcagc gggcgttcga cggcgaggca ctcgctcatc
     2821 acttcccgaa acaggcgtgc taccgattcg tcgggcagcg ggcctttgtt caaatcctga
     2881 atgcggcgca acacggcgac ttcgcgttcg gggcggtaca ctgcgcccgt gcctttcagc
     2941 tcgccgatgg cgtgggcgtg ttgcgcacgt tcgttgagca ggcgcaggat ttcggcatcg
     3001 atggtgtcga tggcgttgcg gtggggaagg aggagttcgt cgatagtttg ggacataatt
     3061 tcgcctgaac agtaatttat cgtgcattct aacatcaaat gccgtctgaa acggtttcag
     3121 acggcatttt ccgttaaagg tattcgctct gttcgttttc cttccacgcc cggtgcgaac
     3181 acagccacag aagcgcaatg ccgcaagagg tggacgcggt catcgttgcc gccatcacgg
     3241 ttgccgaacc gtcgtgcaag aaggtcgccg ccatacccac ccccgcgccg attaaggact
     3301 ggaacacgcc caacacggcg ttcgcgctgc cgccctcttc tttgaaataa gacataaagc
     3361 atgcctgcgt gttcgcgccg accaagccct gcgtaccgac ggaaaacatc acgcacgcaa
     3421 ccagcagcca aaacgggggc aacccgaaaa acagcacggc ggcgagttgg gacaggttgg
     3481 cggcaaattg gacgacaatc ccccacagca ggatgctttg cggatgcgcg ccggttttga
     3541 gccgccacgc ggtaatacgg ttgaaaaaca tcatcgtgat gatgttgagc gcaaacgccc
     3601 aagcgtactg gtgcggcgta acgtggtaga gctgctggta cacgaaggaa gattcggtca
     3661 gaaaggcgaa catcgaaccg aagctgaatg cctgaaaaaa cagataaccc atcgcggcac
     3721 gggttttcaa tacgcgcttg aaccgccccg ccaccagccc gaacacgtcc ctgccgattt
     3781 tgccgccgac ggcgggcttg ggcaggaaat actgtaccaa accgagcagc accagcgaat
     3841 acgccgccag aaaaacaaaa atcgcctgcc agccacccaa gccctgcaac aatgcgccga
     3901 ccatgggtgc gaccagcggc acaaccatca aaatgatgcc gataagggca aacatctggg
     3961 cggctttgcg tccggaataa taatcgcgca ccattgcgcc gacgatgacc acagtcatgc
     4021 ccgcaccgaa tgcctgcacg acgcgcaggt tgaggagctg ttcggcactc gaagcaaata
     4081 cgatggcggc aacggcaagg cagtagacgg ccagtccggt cagcgcgacg ggtttgcgcc
     4141 ctttgatgtc ggacaccgaa ccgccgacca cctgtccgaa cgccgtgccg aacataaaca
     4201 aactcaggct ctgttcgatg cggtggacat ccgcgttcag cgactgcgcc atttcgggaa
     4261 tcgcgggcag gtaggcatcg atggaaaacg gcatcagcgt aaccagcatc gccatcaaaa
     4321 ccgccatcag tttttcgctc atttcaggat aatgggcaga aggcataaat tctcgtccga
     4381 ttcgcaaaca aaccgcccgg cggcggaaaa cacaatacgc ggaaacggaa aattttaaca
     4441 caccggcaca aacaggcggc aacaaaagcc ccggcaaaac cggacgaacc ggaacgatat
     4501 agtggattaa caaaaaccag tacagcgttg ccttgcctta gctcaaagag aacgattctc
     4561 taaggtgctt aagcacccag tgaatcggtt ccgtactatc tgtactgtct gcggcttcgt
     4621 cgtcttgtcc tgatttttgt taatccgcta taaaatcccg tcattcccgc gcaggcggga
     4681 atccggacat ccaacgctgc agcaatttgt cggaaataac cgaaactcaa aaaaccggat
     4741 gcccgcctgc gcgggaatga cgatgcaaag atggtcgtta tttcggataa atatccgtct
     4801 tttcgttccg gatacccgct ttcgcaggaa tggagatgga aagatttcag cctattcggc
     4861 aatcatcaaa taccgcttcc caactttatt tttgatgcga cagccggccg gcaaccaagg
     4921 tggcggcgat gacgacaaac acgcccaagg cggacacggg cgacaggtgt tcgcccaaaa
     4981 tcaaaaccgc cagcagcacg ccgacgacgg gttcgagcga aatcaacagt cccgacacgt
     5041 tggcaggaac acggctcatc cccttgttcc acagccaata ggcgtaccag ccgcacccca
     5101 cgcccaaata cagcagcgac aataccattc cgacgctcca gtccacggta taactttgcg
     5161 ccaaagcaag cgaaaacggc aggcacatca acgatgcggc ggcaatggaa acagatgtga
     5221 atgccggtgc gccgatgcgt gcaatcagcc tttgcgtcgg acgcatagcg gcacaaaagc
     5281 ccgcgcccgc caacaacacc agcaggcagc cgaaccagcc gacttcgccg ccctcttccg
     5341 caccgcccgc catcagcagc gcgacaccgg caaatgccgc cgcgccgcat atccagtggt
     5401 aggcacgcgc tttgtcgttg aagaaaaagt gtccgacaaa caccatcagc agcggctcga
     5461 gtccgacaat gaccgatgcg ctggcggcgg aagtgtattt caacccgaca aactgaagca
     5521 gcagggtcag cacatagttg acgaacgaca caatcagcaa cggcttccat tcctcacgcg
     5581 gaatcttgcc gacatgacgg cggcaggcgg gcagtgcagg cagcgcagca atcagcaggc
     5641 gcacgccgac catcaatgcg ggatcgatgc cgccatagac atatttggcg gcaataaacg
     5701 agctgctcca gataatcagg gcaaggattt ggtaaaacat agtgagtgat aaagtcagat
     5761 ggtcatacaa aagtatagcg gattaacaaa aatcaggaca aggcg
//
LOCUS       DAXHKG010000118         5675 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.118, whole genome shotgun sequence.
ACCESSION   DAXHKG010000118 DAXHKG010000000
VERSION     DAXHKG010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5675
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.118"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(81..842)
                     /locus_tag="ACFMWP_001696"
     CDS             complement(81..842)
                     /locus_tag="ACFMWP_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892263.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKVVPTYAPLSRPSETGTDASVP
                     KLDDASRNRVLKAYLKKWQEEHNAAVADCGEEIETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDTKKDSVEFETGQIEGGENADEAESGTNEPAVSENGENDAEETLMPV
                     QLNILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            942..1193
                     /locus_tag="ACFMWP_001697"
     CDS             942..1193
                     /locus_tag="ACFMWP_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892264.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEVA
                     LESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1245..2051
                     /locus_tag="ACFMWP_001698"
     CDS             1245..2051
                     /locus_tag="ACFMWP_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC5892265.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDEQAAK"
     gene            2358..3881
                     /locus_tag="ACFMWP_001699"
     CDS             2358..3881
                     /locus_tag="ACFMWP_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HFC5892266.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKSIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            3979..5391
                     /gene="trkA"
                     /locus_tag="ACFMWP_001700"
     CDS             3979..5391
                     /gene="trkA"
                     /locus_tag="ACFMWP_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HFC5892267.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1424 a         1712 c         1383 g         1156 t
ORIGIN      
        1 ttttgcgcct gttccatgag gctttcaagt cggatgagaa tgcaaatgcc gtctgaaacg
       61 gctttcagac ggcatggcaa tcagcgtttg tattttaact cgtacttgat gtcgttgagg
      121 attttgcgga catcgtgttc caacacgtct tcgactaccg cccccgcctg ctcgtgcagc
      181 atctgctgga gctgataggt gaaaaccgcc atctgctttt gcaccgccgt tcggatgatg
      241 ccgttgacgg tatcggtcag atgggggcgc aggcgtttga tcagccgttc ggtcagctcc
      301 tgttcggaca ggcagaacac ttcgcgccgg ttgacggctt tcgggttcag gatattgagt
      361 tggacgggca tcaacgtttc ttccgcatcg ttttccccgt tttccgaaac cgccggctca
      421 ttcgtgccgg attctgcctc gtcggcgttt tccccgcctt caatctgtcc ggtttcaaat
      481 tcgacactgt cttttttggt atcaaaccgg attctccgcc gcgattcgat gtgtttttcc
      541 gaaaccgaca tttgcaggga agcctgcgcg ttgagccagt tttcctgaag gacgatcatc
      601 gggtcggttt cgatttcttc cccgcaatcg gcaacggcgg cattgtgctc ctcctgccat
      661 ttcttcagat acgcctttaa cacacggttt cggcttgcat cgtccagttt cggcacagac
      721 gcgtccgttc cggtttcaga agggcgggac agcggcgcgt aagtcggcac taccttcata
      781 cggcgcgtct gacgcaggtt ttccaaacgt ttttcccaat tcggctcttt attcgcatcc
      841 attttcggct tccggtcctt aatctttgca agcagacaaa cccgcgccca aagcgcggtt
      901 tgatataatg gcgcatttta acagattcgc gaggatacat catgggcagc atcgaacagc
      961 gtttggaata tctggaagag gcgaacgacg tgctgcgtat gcagaaccac gtcctgtcca
     1021 ccgccttcaa agccttaatc cgcgcccttc ccgccgacac cgccgaagtc gcgctcgagt
     1081 ccatccagct tgcttttgag gacgccttgg cagaattgag ctatgaggac agcccgcata
     1141 cggatttgtt ccacgacgtt acttatgcgt ttttccgtga aaaagaacgt taattttatg
     1201 ttaaactgat tttttaggct ttttgattac cgaaaggaat tttgatgaat atgaaaaaat
     1261 ggattgccgc cgcccttgcc tgttccgcac tcgcgctgtc tgcctgcggc ggtcagggca
     1321 aagatgccgc cgcgcccgcc gcaaaccccg acaaagtgta ccgcgtggct tccaacgccg
     1381 agtttgcccc ctttgaatct ttagactcga aaggcaatgt cgaaggtttc gatgtggatt
     1441 tgatgaacgc gatggcgaag gcgggcaatt ttaaaatcga attcaaacac cagccgtggg
     1501 acagcctttt ccccgccttg aacaacggcg atgcggacgt tgtgatgtcg ggcgtaacca
     1561 ttaccgacga ccgcaaacag tctatggact tcagcgaccc gtattttgaa atcacccaag
     1621 tcgtcctcgt tccgaaaggc aaaaaaatat cttcttccga cgatttgaaa aacatgaaca
     1681 aagtcggcgt ggtaaccggc tacacgggcg atttctccgt atccaaactc ttgggcaacg
     1741 acaatccgaa aatcgcgcgc tttgaaaacg ttcccctgat tatcaaagaa ctggaaaacg
     1801 gcggcttgga ttccgtggtc agcgacagcg cggtcatcgc caattatgtg aaaaacaatc
     1861 cgaccaaagg gatggacttc gttaccctgc ccgacttcac caccgaacac tacggcatcg
     1921 cggtacgcaa aggcgacgaa gcaaccgtca aaatgctgaa cgatgcgttg gaaaaagtac
     1981 gcgaaagcgg cgaatacgac aagatttacg ccaaatattt tgcaaaagaa gacgaacagg
     2041 ccgcaaaata agcccgccca tccgaacaca atgccgtctg aagccctttc agacggcatt
     2101 gttcatcaat cggcctacaa tgaactgcct gctgatttct ccctaccgca aagcaacagg
     2161 caaagattac aaatatcaaa atccgagtaa aacagtattt tattaaaaca aattgataat
     2221 caagagatta gaattatgta ttgtctttac cgtacaaacg ctggcactat ttcaacctga
     2281 taaaaaacag ccttcaaaaa ggttgcttaa aacagcagca gacacttacc gccacaacct
     2341 tgaaaaggaa cacaatcatg accgtcatca aacaggaaga ctttatccaa agcatttgcg
     2401 atgccttcca attcatcagc tactaccatc cgaaagacta catcgacgcg ctttataagg
     2461 cgtggcagaa ggaagaaaac cccgccgcca aagacgcgat gacgcagatt ttggtcaaca
     2521 gccgcatgtg tgccgaaaac aaccgcccca tctgccaaga taccggtatc gcgaccgtct
     2581 tcctcaaagt cggtatggat gtgcagtggg atgcggacat gagcgtcgaa gaaatggtta
     2641 acgaaggcgt gcgccgcgcc tacacttggg aaggcaacac cctgcgcgcc tctgtcctcg
     2701 ccgatccggc cggcaaacgt caaaacacca aagacaacac ccccgccgtc atccatatga
     2761 gcatcgtgcc gggcggtaaa gtcgaagtaa cctgcgcggc aaaaggcggc ggctctgaaa
     2821 acaaatccaa actcgccatg ctcaatcctt ccgacaacat cgtcgattgg gtattgaaaa
     2881 gcatcccaac catgggcgca ggctggtgtc ctcccggcat cttgggcatc ggcatcggcg
     2941 gcacgcccga aaaagccgtg ctgatggcaa aagagtccct gatgagccac atcgacattc
     3001 aagagttgca ggaaaaagca gcgtcaggtg cagaattgtc caccaccgaa gccctgcgcc
     3061 tcgaactctt tgaaaaagtc aacgcgctag gcatcggcgc gcaaggcttg ggcggtctga
     3121 ccaccgtgtt ggacgtgaaa atcctcgatt acccgaccca cgccgcctcc aaaccgattg
     3181 ccatgattcc gaactgcgcc gccacccgcc acgtcgaatt tgaattggac ggctcaggcc
     3241 ctgtcgaact cacgccgccg cgcgtcgaag actggcccga tttgacttac agccccgaca
     3301 acggcaaacg cgtcgatgtc gacaagctga ccaaagaaga agtggcaagc tggaaaaccg
     3361 gcgacgtatt gctgttgaac ggcaaaatcc tcaccggccg cgatgccgca cacaaacgcc
     3421 tcgtcgatat gctcaacaaa ggcgaagaat tgcccgtcga tttcaccaac cgcctgattt
     3481 actacgtcgg ccccgtcgat ccggtcggcg atgaagtcgt cggtccggca ggtccgacca
     3541 cagccacccg catggacaaa ttcacccgcc aaatgctcga acaaaccggc ctcttgggca
     3601 tgatcggcaa atccgagcgc ggcgtggcca cctgcgaagc catcgccgac aacaaagccg
     3661 tgtacctcat ggcagtcggc ggcgcggcgt atctcgtggc aaaagccatc aaatcttcca
     3721 aagtcttggc gttccccgaa ttgggcatgg aagccattta cgaatttgaa gtcaaagaca
     3781 tgcccgtaac cgtcgccgta gatagcaaag gcgaatccat ccacgccacc gccccgcgca
     3841 aatggcaggc gaaaatcggc atcatccccg tcgaatcttg aggcgccatg ccgtctgaac
     3901 acaaaatctg ccttcagacg gcatttccgc ccccggttgc ggtacaatcc accatttcat
     3961 cactcggcga cccacaccgt gaaaatcctc attttaggca acggacaggt aggttctacc
     4021 gtcgcacaaa accttgccgc catacccaac aacgacgtaa ccgttatcga catcgacgaa
     4081 aaagcattgc aggaaacagg cagccgcctc gatgtccaaa ccgttttcgg caacggcgca
     4141 tcccccttca cattagaacg cgccggcgcg gaagatgccg acttgctgct cgcgctctcc
     4201 cgcagcgacg aaaccaacat cgtcgcctgc aaagttgccg ccgacctgtt caacatcccc
     4261 ggccgcatcg cgcgcgtccg ttccagcgaa tacctcgaat acctcagccc caagctcgaa
     4321 aacaacgaaa acggcagcct ttccatattc ggcataaccg aaaccatcag ccccgaacag
     4381 ctcgttaccg aacagcttgc cggcctgata gactgcccgg gcgcattgca ggttttacgt
     4441 tttgcagacg accgcgtgcg gatggtcatc atacaggcgc ggcgcggcgg actgcttgtc
     4501 ggacgcagca ttgccgacat cgcccaagat ttgcccgacg gggccgactg ccaaatctgc
     4561 gccgtttacc gcaacaaccg cctcatcgtc cccgcgccgc aaaccgtcat catcgaaggc
     4621 gacgaaatcc tatttgccgc cgccgccgaa aacatcggcg cggtcatacc cgaattgcgc
     4681 cccaaagaaa ccagcacccg ccgcatcatg attgccggcg gcggcaacat cggctaccgt
     4741 ctcgccaagc agctcgaaca cgcatacaac gtcaaaatca tcgaatgccg gccgcgccgt
     4801 gccgaatgga tagccgaaaa cctcgacaac accctcgtcc tgcaaggttc ggcaaccgac
     4861 gaaaccctgc tcgacaacga atacatcgac gaaatcgacg tattctgcgc cctgaccaac
     4921 gacgacgaaa gcaacattat gtccgccctt ttggcgaaaa acctcggcgc gaagcgcgtc
     4981 atcggcatcg tcaaccgctc aagctacgtc gatttgctcg aaggcaacaa aatcgacatc
     5041 gtcgtctccc cccacctcat caccatcggc tcgatactcg cccacatccg gcgcggcgac
     5101 atcgttgccg tccaccccat ccggcgcggc acggcggaag ccatcgaagt cgtcgcacac
     5161 ggcgacaaaa aaacttccgc catcatcggc aggcgcatca gcggcatcaa atggcccgaa
     5221 ggctgccaca ttgccgccgt cgtccgcgcc ggaaccggcg aaaccattat gggacaccat
     5281 accgaaaccg tcatccaaga cggcgaccac atcatctttt tcgtctcgcg ccggcgcatc
     5341 ctgaacgaac tggaaaaact catccaggtc aaaatgggct ttttcggata aaccgcccca
     5401 ttccggacat attgccgcca agcggtatgg aagcggaata atggtaggtg ggcttcagac
     5461 ggcatccgcc ctccccgtca ttcccgcgta agcgggaatc cagaccttgg gatagcggca
     5521 atattcaaag gttataaaag acccgtcatt cccgcgcagg cgggaatcca gaccttggga
     5581 tagcggcaat attcaaaggt tagctgaagc tttagagatt ctagattccc gtttccacgg
     5641 gaatgacgaa aggttgcggg aatccaaacc attgg
//
LOCUS       DAXHKG010000119         5667 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.119, whole genome shotgun sequence.
ACCESSION   DAXHKG010000119 DAXHKG010000000
VERSION     DAXHKG010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.119"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..89)
                     /locus_tag="ACFMWP_001701"
     CDS             complement(<1..89)
                     /locus_tag="ACFMWP_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HFC5892268.1"
                     /translation="MLYPEKMSGMAGRHPYGVRSGLRRNGLKL"
     gene            complement(125..238)
                     /gene="rrf"
                     /locus_tag="ACFMWP_001702"
     rRNA            complement(125..238)
                     /gene="rrf"
                     /locus_tag="ACFMWP_001702"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(335..3226)
                     /locus_tag="ACFMWP_001703"
     rRNA            complement(335..3226)
                     /locus_tag="ACFMWP_001703"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3633..3708)
                     /locus_tag="ACFMWP_001704"
     tRNA            complement(3633..3708)
                     /locus_tag="ACFMWP_001704"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3673..3675),aa:Ala,seq:tgc)
     gene            complement(3714..3790)
                     /locus_tag="ACFMWP_001705"
     tRNA            complement(3714..3790)
                     /locus_tag="ACFMWP_001705"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3754..3756),aa:Ile,seq:gat)
     gene            complement(3891..5431)
                     /locus_tag="ACFMWP_001706"
     rRNA            complement(3891..5431)
                     /locus_tag="ACFMWP_001706"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1215 a         1657 c         1214 g         1581 t
ORIGIN      
        1 caaagtttca agccgttcct ccgcaaaccc gaccggacgc cgtacggatg ccgtcccgcc
       61 atccccgaca ttttttccgg gtaaagcaaa aacccccgaa taatcggggg ttttctgaaa
      121 gggtgtttgg cagtgaccta ctttcgcatg gaagaaccac actatcatcg gcgctgagtc
      181 gtttcacggt cctgttcggg atgggaaggc gtgggaccaa ctcgctatgg ccgccaaact
      241 taaactgtta caaatcggta aagccttaat caatatattc ggtaatgact gaatcagtca
      301 gtaagctttt atctcttgaa gttcttcaaa tgatagagtc aagcctcacg agcaattagt
      361 atgggttagc ttcacgcgtt accgcgcttc cacaccccac ctatcaacgt cctggtctcg
      421 aacgactctt tagtgcggtt aaaccgcaag ggaagtctca tcttcaggcg agtttcgcgc
      481 ttagatgctt tcagcgctta tctcttccga acttagctac ccggctatgc aactggcgtt
      541 acaaccggta caccagaggt tcgtccactc cggtcctctc gtactaggag cagcccccgt
      601 caaacttcca acgcccactg cagataggga ccaaactgtc tcacgacgtt ttaaacccag
      661 ctcacgtacc actttaaatg gcgaacagcc atacccttgg gaccgactac agccccagga
      721 tgtgatgagc cgacatcgag gtgccaaact ccgccgtcga tatgaactct tgggcggaat
      781 cagcctgtta tccccggagt accttttatc cgttgagcga tggcccttcc atacagaacc
      841 accggatcac tatgtcctgc tttcgcacct gctcgacttg tcggtctcgc agttaagcta
      901 ccttttgcca ttgcactatc agtccgattt ccgaccggac ctaggtaacc ttcgaactcc
      961 tccgttacgc tttgggagga gaccgcccca gtcaaactgc ctaccatgca cggtccccga
     1021 cccggatgac gggtctgggt tagaacctca aagacaccag ggtggtattt caaggacggc
     1081 tccgcagaga ctggcgtctc tgcttctaag cctcccacct atcctacaca agtgacttca
     1141 aagtccaatg caaagctaca gtaaaggttc acggggtctt tccgtctagc agcgggtaga
     1201 ttgcatcttc acaaccactt caacttcgct gagtctcagg aggagacagt gtggccatcg
     1261 ttacgccatt cgtgcgggtc ggaacttacc cgacaaggaa tttcgctacc ttaggaccgt
     1321 tatagttacg gccgccgttt actggggctt cgatccgatg ctctcacatc ttcaattaac
     1381 cttccagcac cgggcaggcg tcacacccta tacgtccact ttcgtgttag cagagtgctg
     1441 tgtttttaat aaacagtcgc agccacctat tctctgcgac cctccggggc ttacggagca
     1501 agtccttaac cttagagggc ataccttctc ccgaagttac ggtatcaatt tgccgagttc
     1561 cttctcctga gttctctcaa gcgccttaga attctcatcc tgcccacctg tgtcggtttg
     1621 cggtacggtt cgattcaaac tgaagcttag tggcttttcc tggaagcgtg gtatcggttg
     1681 cttcgtgtcc gtagacactc gtcgtcactt ctcggtgtta agaagacccg gatttgccta
     1741 agtcttccac ctaccggctt aaacaagcta ttccaacagc ttgccaacct aaccttctcc
     1801 gtccccacat cgcatttgaa tcaagtacag gaatattaac ctgtttccca tcgactacgc
     1861 atttctgcct cgccttaggg gccgactcac cctacgccga tgaacgttgc gcaggaaacc
     1921 ttgggctttc ggcgagcggg cttttcaccc gctttatcgc tactcatgtc aacattcgca
     1981 cttctgatac ctccagcaca ctttacaatg caccttcatc ggcctacaga acgctcccct
     2041 accatgccga taaaccggca tccgcagctt cggttataga tttgagcccc gttacatctt
     2101 ccgcgcagga cgactcgacc agtgagctat tacgctttct ttaaatgatg gctgcttcta
     2161 agccaacatc ctggctgtct gggccttccc acttcgttta ccacttaatc tatcattggg
     2221 gaccttagct ggcggtctgg gttgtttccc tcttgacaac ggacgttagc acccgctgtc
     2281 tgtctcccga ggaaccactt gatggtattc tgagtttgcc atgggttggt aagttgcaat
     2341 aaccccctag ccataacagt gctttacccc catcagtgtc ttgctcgagg cactacctaa
     2401 atagttttcg gggagaacca gctatctccg agtttgttta gcctttcacc cctatccaca
     2461 gctcatcccc gcattttgca acatgcgtgg gttcggtcct ccagtacctg ttacggcacc
     2521 ttcaacctgg ccatggatag atcactcggt ttcgggtcta cacccagcaa ctcatcgccc
     2581 tattaagact cggtttccct acgcctcccc tattcggtta agctcgctac tgaatgtaag
     2641 tcgttgaccc attatacaaa aggtacgcag tcacacctct agggcgctcc cactgtttgt
     2701 atgcatcagg tttcaggttc tgtttcactc ccctcccggg gttcttttcg cctttccctc
     2761 acggtactgg ttcactatcg gtcgatgatg agtatttagc cttggaggat ggtcccccca
     2821 tattcagaca ggatttcacg tgtcccgccc tacttttcgt acgcttagta ccgctgttga
     2881 gatttcgaat acgggactgt cacccactat ggtcaagctt cccagcttgt tcttctatct
     2941 cgacagttat tacgtacagg ctcctccgcg ttcgctcgcc actacttgcg gaatctcggt
     3001 tgatttcttt tcctccgggt acttagatgg ttcagttctc cgggttcgct tctctaagtc
     3061 tatgtattca acttaggata ctgcacagaa tgcagtgggt ttccccattc ggacatcgcg
     3121 gaatcattgc tttattgccg gctcccccgc gcttttcgca ggcttacacg tccttcgtcg
     3181 cctatcatcg ccaaggcatc cgcctgatgc acttattcac ttgactctat catttcaaga
     3241 acttctttga ctttgcctaa cattccgttg actagaacat cagacttgaa tttcctactt
     3301 tgataaagct tactgctttg ttgtgtctta atcctgcctt ttgtgtttca ggattaagtc
     3361 gatacaatca tcacccaaat actgtgtttg ttttcttttc tcttgtgagc gattttttat
     3421 cctttgcaaa gaataaaaaa tcaaaacaaa cgctttgtct ttgtttgttg atttcggctt
     3481 tccaatttgt taaagatcga tgcgttcgat attgctatct actgtgcaaa tcaaaacgag
     3541 ctgattatta tatcagcatt ttgttcttgg tcaagtgtga tgtcgccctg aatggattct
     3601 gttccattct tccgttttga tttgtacagt attggtggag gcaaacggga tcgaaccgat
     3661 gaccccctgc ttgcaaagca ggtgctctac caactgagct atgcccccgt tcttggtggg
     3721 tctgggagga cttgaacctc cgaccccacg cttatcaagc gtgtgctcta accagctgag
     3781 ctacaaaccc ggattctctt cttaagcgaa tcttgccttc actcaagctt cttccgcatc
     3841 ttttcagttt accgataagt gtgaatgcct aaagcctctt ctttctctag aaaggaggtg
     3901 atccagccgc aggttcccct acggctacct tgttacgact tcaccccagt catgaagcat
     3961 accgtggtaa gcggactcct tgcggttacc ctacctactt ctggtatccc ccactcccat
     4021 ggtgtgacgg gcggtgtgta caagacccgg gaacgtattc accgcagtat gctgacctgc
     4081 gattactagc gattccgact tcatgcactc gagttgcaga gtgcaatccg gactacgatc
     4141 ggttttgtga gattggctcc gcctcgcggc ttggctaccc tctgtaccga ccattgtatg
     4201 acgtgtgaag ccctggtcat aagggccatg aggacttgac gtcatcccca ccttcctccg
     4261 gcttgtcacc ggcagtctca ttagagtgcc caactgaatg atggcaacta atgacaaggg
     4321 ttgcgctcgt tgcgggactt aacccaacat ctcacgacac gagctgacga cagccatgca
     4381 gcacctgtgt tacggctccc gaaggcactc ctccgtctct ggaggattcc gtacatgtca
     4441 agaccaggta aggttcttcg cgttgcatcg aattaatcca catcatccac cgcttgtgcg
     4501 ggtccccgtc aattcctttg agttttaatc ttgcgaccgt actccccagg cggtcaattt
     4561 cacgcgttag ctacgctact aagcaatcaa gttgcccaac agctaattga catcgtttag
     4621 ggcgtggact accagggtat ctaatcctgt ttgctaccca cgctttcggg catgaacgtc
     4681 agtgttgtcc caggaggctg ccttcgccat cggtattcct ccacatctct acgcatttca
     4741 ctgctacacg tggaattcta cctccctctg acacactcga gtcacccagt tcagaacgca
     4801 gttcccgggt tgagcccggg gatttcacat cctgcttaag taaccgtctg cgcccgcttt
     4861 acgcccagta attccgatta acgctcgcac cctacgtatt accgcggctg ctggcacgta
     4921 gttagccggt gcttattctt caggtaccgt catcagccgc tgatattagc aacagccttt
     4981 tcttccctga caaaagtcct ttacaacccg aaggccttct tcagacacgc ggcatggctg
     5041 gatcaggctt gcgcccattg tccaaaattc cccactgctg cctcccgtag gagtctgggc
     5101 cgtgtctcag tcccagtgtg gcggatcatc ctctcagacc cgctactgat cgtcgccttg
     5161 gtaggccttt accccaccaa ctagctaatc agatatcggc cgctcgaata gcgcaaggcc
     5221 cgaaagtccc ctgctttctc tctcaagacg tatgcggtat tagctgatct ttcgatcagt
     5281 tatcccccac tactcggtac gttccgatat gttactcacc cgttcgccac tcgccacccg
     5341 agaagcaagc ttctctgtgc tgccgtccga cttgcatgtg taaagcatgc cgccagcgtt
     5401 caatctgagc caggatcaaa ctcttatgtt caatctctaa ctttttaact tctggtctgc
     5461 ttcaaagaaa ccaacaggac aatgttcaaa acattatctt gtctgtcttt caaacagtgt
     5521 gaggctcaag gcactcacac ttatcggtaa tctgttttgt taaagagcgt ttgaattata
     5581 aagtatttct tccgcctgtc aagatatctc tcgatatccc caacattctg tgctatactt
     5641 ttcagttcgt ccgccgcttc tgcagca
//
LOCUS       DAXHKG010000120         5618 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.120, whole genome shotgun sequence.
ACCESSION   DAXHKG010000120 DAXHKG010000000
VERSION     DAXHKG010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.120"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="ACFMWP_001707"
     CDS             complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="ACFMWP_001707"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HFC5892269.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGMHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1445..2425)
                     /locus_tag="ACFMWP_001708"
     CDS             complement(1445..2425)
                     /locus_tag="ACFMWP_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HFC5892270.1"
                     /translation="MTAARAGLVRFNYLKVKQAVQSKQIKGFKLWKSYDEQLEILRSR
                     GLQIDDEKKALGYLRTIGYYRLSGYFYSFRQFAPESSKSRLDEFITDTRFEDVKSLYM
                     FDKKLRQLALDALERIEVALRVNIAHTLGRHDPLAYKDSKYSATGFDHAEWLDRYNRL
                     VEREKKTGFVKHHLEHYADLPVWVACEVWDFGTMSMLYKGMLNKDKDSIAKLYRLKDG
                     KHLQTHLHAFNFIRNVSAHHSRLWNRDITFKASLKGLSDAEWKSLPINKPFVYFCLMK
                     RMLDVICPRTEWGNRLLALLDEFPDVANEAVSLRDMGLENNPRDWRLWQG"
     gene            complement(2391..4670)
                     /gene="nrdA"
                     /locus_tag="ACFMWP_001709"
     CDS             complement(2391..4670)
                     /gene="nrdA"
                     /locus_tag="ACFMWP_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HFC5892271.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEARLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKDAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPNKFEGSKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQADIQDDGCAGGACKI"
     gene            5199..5510
                     /locus_tag="ACFMWP_001710"
     CDS             5199..5510
                     /locus_tag="ACFMWP_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HFC5892272.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         1406 a         1364 c         1310 g         1538 t
ORIGIN      
        1 gaacaataac cgatcctacc cgctgttttt cccatcatac aacatacaaa tgccgtctga
       61 aacatccggc ttcagacggc attttgtcaa aaaacgttta caactcaaaa tcgcccaaat
      121 catccgtatt cacttcagaa tcgatctgac cgatcaaata agaggatatt tccacttcct
      181 gcggcgcgac ctgtacgttg tcggacgaca gccacgcatt aatccacgga atcgggtttt
      241 gatttgcgcc ttcaaatccg gccggcaacc ccaccgcctg catacgcaga ttggtaatat
      301 attcgacgta ttgggataag atttctttgt tcaaaccgat catcgaaccg tccttaaaca
      361 aatatgccgc ccattctttt tcctgttccg ccgctttttt gaagagttgg aaacattcgt
      421 cctgcaactc ggcggcaatt tctgccattt cagaatcatc aacacccgaa cgcatcagat
      481 taagcatatg ctgcgtgccg gtcaggtgca gggcttcgtc gcgggcaatc agtttgatga
      541 ttttggcgtt gccttccatc aactcgcgct cggcaaaagc aaacgagcag gcgaatgaaa
      601 cgtagaaacg gatggcttcc aacacgttga cgcacatcag gcagagatag agttttttct
      661 tcaacccgcg caaagacaca gtaatgggtt ttccgccgac attatgcatc ccttcgccca
      721 acaggttgta atactgggtg tattcgatta agtcatcgta atagcaggca atgtcttcgg
      781 cgcgggcggt aatgtattcg ttttcgacaa tatcatcaaa cacgaccgac ggatcattca
      841 caatattgcg gatgatgtgg gtatagctgc gcgagtgtat ggtttcgctg aagctccacg
      901 tttcaatcca cgtttccagc tcgggaatcg aaaccaaagg cagcaaggca acattcggac
      961 tgcgcccttg gatggaatcg agcagtgttt ggtatttcag attgctgatg aaaatatgtt
     1021 tttcgtgttc aggcaggttg gcgtagtcga tacggtcgcg cgacacgtcg atttcttccg
     1081 gccgccaaaa aaacgacaat tgtttttcaa tcagtttttc aaatacctcg tatttctgct
     1141 ggtcataacg ggcgacattc acaggctgac cgaaaaacat cggctcattc agcgcgtcgt
     1201 ttttggtttt gggaaaggtg ctgtatgaca tgactaggtg ttcgcaggac atggttttct
     1261 caggtttatt taaatttagg aatttggatt tcagacagcc ttatatgttt taagtaaggt
     1321 catctgaatg tatctgtaca ttgaattctt gccttaaata tcgctgttag ttataatctt
     1381 ccccaacaac tcccccaact ttgccaacct acgcggttgg agcaacaagg ttgggggctt
     1441 tcttttatcc ctgccacaat ctccagtctc gcggattatt ttccaaaccc atatcgcgca
     1501 aacttacagc ttcattcgcg acatcgggaa actcatccag taaagcaaga agacggtttc
     1561 cccattcggt tcgcggacaa ataacatcca acatccgttt catcaggcaa aaatacacaa
     1621 acggtttatt gataggcaat gatttccatt ctgcatcaga caaacctttc aagctggctt
     1681 taaaagtaat atccctattc cataatcgac tgtgatgtgc cgaaacgttg cggataaagt
     1741 taaatgcgtg cagatgtgtt tgcagatgct taccgtcttt caaacgatac aatttggcaa
     1801 tagagtcttt atctttattc aacatccctt tatacagcat agacatcgtg ccgaaatccc
     1861 atacttcgca ggctacccag acaggtaagt cggcataatg ttccaaatga tgtttaacaa
     1921 aaccggtttt cttttcgcgc tcgaccagcc tgttatacct atccagccat tccgcatggt
     1981 cgaaacctgt ggcagaatat ttgctatctt tgtaagccaa tgggtcatgc cgtcctaatg
     2041 tatgggcaat atttacccga agcgctactt caattctttc cagtgcatct aatgccaatt
     2101 gccgcaattt cttatcgaac atataaaggc ttttgacatc ttcaaaacga gtatctgtaa
     2161 taaactcatc caacctgctc ttagaacttt caggagcaaa ttgtcggaaa gagtaaaaat
     2221 aaccgcttaa tcggtaataa ccgatggtgc gtaaatatcc taatgccttt ttctcatcat
     2281 caatctgcaa tcctctactt cttagaatct ccaactgctc atcgtaagat ttccaaagct
     2341 tgaagccttt tatctgcttg ctttgcacag cctgtttcac tttcaaatag ttaaatctta
     2401 caagccccgc ccgcgcagcc gtcatcctga atatcggctt gcgtatcgtc cgcgccgtcg
     2461 cgggtgttgt ggtagtacag ggttttgacg ccgtatttgt aagcggtcaa taagtctttg
     2521 agcatttgtt tcatggaaac tttgctgcct tcgaatttgt tcgggtcgta ggcggtattg
     2581 gcggaaatcg attgatcgac gaatttttgc attacgccga caagtttcaa gtagccttcg
     2641 ttgccgggaa gctgccacag ggtttcgtag gcgtctttca gggtttcaaa ttccggtacg
     2701 acttgtttca aaataccgtc ttttgatgct ttgaccgtta ccaatccgcg cggcggctcg
     2761 ataccgttgg tggcgttggc gatttgcgaa ctggtttcag acggcatgag tgcggttaga
     2821 gtagagttac gcaggccgta tttgacgatt tcggcacgca ggctttccca gtcgtaatgc
     2881 aaaggctcgc cgcagacggc atccaaatct tttttgtagg tgtcgatggg cagtttgcct
     2941 tgcgaataaa cggtttggtt aaagagcgta cacgcaccgt attctttggc aaggtttgcc
     3001 gatgctttga gcaggtaata ctgtatggct tcaaaggtac ggtgggtcag accgagcgcg
     3061 gagccgtcgc tgtagcggac accgtttttc gccagataat aagcatagtt aatcacgccg
     3121 atgccgagcg aacggcggcc catagtagag gtacgcgcgg cttctaccgg atatccctga
     3181 taatctaaaa gtgcatcgag cgcacgaacg gtcaagtcgg caagcccttc caattcgtcc
     3241 aagctgttta atgcgcccaa gttaaaggca gacagtgtac acagggcgat ttcgccgttc
     3301 ggatcgttga tattgtccag cggtttggtc ggcagggcga tttccataca caagttggac
     3361 tgatgaacag gcgcgacgcg cggatcgaac gggctgtgcg tattgcagtg atcgacgttt
     3421 tgaatgtaga tgcgcccggt tccggcacgc tcctgcatca gcgtggaaaa caggtcggca
     3481 gccggaatga tgcgcttgcg gatatcaggg tcttgctcgt atttcgtata gagccgctca
     3541 aattcgtctt ggtcggcaaa aaacgcttcg tacaatcccg gaacctcgtt gggcgaaaac
     3601 agcgtaatgt tgccgccctt aatcaggcgg gtgtacagca ggcggttgat ttgcacgccg
     3661 taatcaagct gacggatacg gttgtcttcc acaccgcggt tgtttttcaa caccagcagg
     3721 ctttcggctt cgatatgcca caaggggtag aacaaggttg ccgcgccgcc gcgcacgccg
     3781 ccttgcgaac aggatttgac cgccgcctga aacattttaa agaagggaat gcagccggta
     3841 tgccgcgctt cgccgccccg gatttcgctg tccaaaccgc ggatacgtcc ggcattgatg
     3901 ccgatgcccg cacgctggga aacgtatttc acaatcgcgc tggtagtggc attgatggaa
     3961 tccaaactat cgtcgcattc aatcagcaca cagcttgaga actggcgcgt aggcgtacgc
     4021 acgccgctca taatcggagt cggcagcgat actttaaatg tagaaacggc atcgtaaaac
     4081 cgtttgacgt aacccaagcg cgcctctttc gggtatttgc tgaaaaggca catcgccacc
     4141 aaaacatata aaaactgcgg cgtttcgtaa atttggcggg taacgcggtt ctgtaccaga
     4201 tatttgcctt cgagctgttt gacagcggca taggaaaagg acatatcgcg ttcgtggtcg
     4261 atataggcgt tcagttcgtc aaattcttcg cggctgtaat cctcaaggat atgcctgtcg
     4321 tattttccgg catcggtaag ttttttaacg tggtcgtaaa ggtgcggcgg ctcgtactcg
     4381 ccgtaggcta ttttacgaag atggaaaatc gccaaacgcg cggcaaggta ttggtagtcc
     4441 ggggtatctt ccgaaattaa atcggcagcg gctttgatga tggtttcgtg gatgtcgtcg
     4501 gtgcggatgc cgttgtagaa ctggatgtgc gatttcaact cgacctgaga tacggaaaca
     4561 ttttccaatc cgtccgccgc ccaagtgacg acacggtgaa tcttatccaa atcaatggct
     4621 tctaatcttc cgtctcgttt ggttactttc aaatcagtcg gtgtattcat cgcttcctct
     4681 tccactcttg atattcaaga cacagtcttt tcaaataaat taaggcagac aatatagtgg
     4741 atttttggca ttttctccag tcttgacaac ggttgtattt ttcagtttca ggcaatgcgc
     4801 gataaaaccc gcctgtcgta tttttcctat aatatttgtt ttatctgata attctttacc
     4861 gataaaaaac gggtaaattt tttgcctttt gaccggctcc ggctacaagg cggtgaaata
     4921 aggattttcc gacgaaaaag gaaagcttcc tgttttctgc ccctgcaaat tgttaaattt
     4981 tgcaaagtat gattttgccg cgccgccgcc gacaaattcc attttcttac cgattggaat
     5041 ttattattga gattaatgtg ttatttgaat ctgcatatca aacggcaagt tttgtcggct
     5101 gaatgagtct gaaactgccg acaatttgcc cgttccatcc ttccatccta tactggaaag
     5161 aatgacaaac tgaaaggatc gtcatgtctg tcaaaaagat gcttgccata ctgttgtctg
     5221 caatattggg actggtatcg acaactgccg ctgccggtac gtcagaaccc gcccaccgcg
     5281 ataccaaaca tatccgcaag gcaaacaagc agatgctgca ccccgaatgc aggaaatatt
     5341 tggaacgccg tgccgcgtgg taccgatcgc aaggcaacgt gcaggaattg cgcgaaaaca
     5401 aaaaggcgcg caaagcattc cgctccctgc cttatgcgga acagaaaatc caatgccggg
     5461 cggcttatga ggctttcgat gatttcgacg gcggcagttt ccgccgttaa tcccatataa
     5521 aatatgccgt ctgaacacag gttcagacgg cattttccat agatacaaca aactatcctt
     5581 acggcatttc gtttgaggtg ctcccgttgc cgcagcct
//
LOCUS       DAXHKG010000121         5527 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.121, whole genome shotgun sequence.
ACCESSION   DAXHKG010000121 DAXHKG010000000
VERSION     DAXHKG010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5527
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.121"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..189
                     /locus_tag="ACFMWP_001711"
     CDS             <1..189
                     /locus_tag="ACFMWP_001711"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892273.1"
                     /translation="RLGSFIGKSRNRSAVIPTKVGIQLFEFQSFPINCLSIECLDSRL
                     RGNDGGNLVYIESKKPAP"
     gene            complement(250..3081)
                     /gene="lbpA"
                     /locus_tag="ACFMWP_001712"
                     /gene_synonym="tbpA"
     CDS             complement(250..3081)
                     /gene="lbpA"
                     /locus_tag="ACFMWP_001712"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HFC5892274.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETHPHGDIADGVAYGINRLDAFRQTYGIKKPSEGGEYFLAEGESEL
                     KPVAKVAGNGNYLNNQLNRWVKERIEQNQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAKKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDQKLIRGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEKYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEYS
                     DYTDKGDKYLLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADH
                     KTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(3078..5255)
                     /locus_tag="ACFMWP_001713"
     CDS             complement(3078..5255)
                     /locus_tag="ACFMWP_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC5892275.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTPPPAKPSIEITPVNRPAVGAAMRLPRRNTAFHREDGTEIPNSKQAEEKLSFQEG
                     DVLFLYGSKGNKLQQLKSEIHKRDSDVEIRTSEKENKKYDYKFVDAGYVYVKGKDEIK
                     WTSDYKQFSNRLGYDGFVYYSGERPSQSLPSAGTVEYSGNWQYMTDAKRHRAGKAVGI
                     DNLGYYTFYGNDVGATSYAAKDVDEREKHPAKYTVDFGNKTLTGELIKNQYVKPSEKQ
                     KPLTIYNITADLNGNRFTGSAKVNPDLAKSHANKEHLFFHADADQRLEGGFFGDKGEE
                     LAGRFISNDNSVFGVFAGKQNSPVPSGKHTKILDSLKISVDEASGENPRPFAISPMPD
                     FGHPDKLLVEGHEIPLVSQEKTIELADGRKMTVSACCDFLTYVKLGRIKTERPAAKPK
                     AQDEEDSDIDNGEESEDEIGDEEEGTEDAAAGDEGSEEDEATENEDGEEDEAEEPEEE
                     SSAEGNGSSNAILPVPEASKGRDIDLFLKGIRTAETNIPQTGEARYTGTWEARIGKPI
                     QWDNHADKEAAKAVFTVDFGKKSISGTLTEKNGVEPAFRIENGVIEGNGFHATARTRD
                     DGIDLSGQGSTKPQIFKANDLRVEGGFYGPKAEELGGIIFNNDGKSLGITEGTENKVE
                     ADVDVDVDVDVDADADVEQLKPEVKPQFGVVFGAKKDNKEVEK"
BASE COUNT         1208 a         1483 c         1270 g         1566 t
ORIGIN      
        1 aggttggggt catttattgg aaaaagcaga aaccgctctg ccgtcattcc cacgaaagtg
       61 ggaatccagc tttttgagtt tcagtcattt ccgataaatt gccttagcat tgaatgtcta
      121 gattcccgcc tgcgcgggaa tgacggcgga aatcttgttt atatcgaatc aaaaaaacct
      181 gcaccttaat cagttggcgg tttagtccga cttttggggt gcagatcaag ctttcagacg
      241 gtatttcctt taaaacttca tttcgagcgc gagactgaag ttcctgcccg gtgcggcata
      301 ccttccatag ttgctgtcgc cgccgtgccg gtttgccgtg ctttccgcgg tctggcgcaa
      361 ggattcccaa gtaacgtagc ggtagttgcc gatattgtag atagccgccc tcaaggtcag
      421 ccgttttttc agattcagat aggcggaaac gtctgccgtc gaccaagaag acgacgctct
      481 ttttgtcgaa tatcgttttt gatcgcctgc cagataagca agctcgtcag ggtttttccc
      541 tttggaatag gtcagcataa tgtttgcgcc ccatttcccc tcgggctggt cgtatccgaa
      601 ccccaaaaca taacgcgacg gctgtaccgc atccaaagca tagctgcgga gagacagtcc
      661 cggccggttg gataccgatt tcggtttgat acggttgtac gccaaagtcg tgtacaaacc
      721 ttcgggcagt ttgccgtaca caccgttcca gtcgattttt cccaatatat taacgccttg
      781 gagcgacata ttttgggcat tgtaataatc gcgtatatca atctctgtca attgtcctgc
      841 ctgattcggc aatttggttt tgtgatcggc aacggcaatc atatcggtat aacggttgcg
      901 gaagctgctg atttccaaaa agccgaaatc gcccttccac tgcaaaccga tttcgcggtt
      961 ggctgccttt tccgatttca gggcgggacg ctgccagcct ttcggataat cgtgataaat
     1021 gtctatcccg aaaagttctt ggaatgaggg cgttctgaag ccgctggagg cgcggtaaga
     1081 caaagaaaaa tgccggttcg gtttgaacac gatgccgctg ttccacgaac ggtcaacata
     1141 ccgcccgctg cggacgagtt cttccgacgt ggtgaagttt ttccggtcgt acctgccgcc
     1201 caagctgaaa tcgaaatatt tgccgattga aaaacggtcg ttcaaagaaa tgtggatatt
     1261 gctgccgttg atttttcttg gcacgcattt gcgggaacgc agggtttcga tgtagccgca
     1321 gaccgaccct tcgacgactt cgggcttacc caaaagatac ttgtctccct tatcggtgta
     1381 atccgagtat tccgaaatcc ttgccgcatt gtgagaaagc tgttcggggc gggaaatcgc
     1441 gttggaagca tcgtaaccga agcccaaagt cagatggtgt ttcgtccatt tgtttttcag
     1501 cgatttctca aacgaggcat tcaaaacatt gtgctgttcg cggtagtgga aacggtcgct
     1561 gctgtcgtag gaatacggtt tgtccgccga cgcgcggcag gatttgtcca cggcaggata
     1621 cacggcgcaa ttcagcttca gcgtgttgtt gtcggttgcc acgccctgtt tgtcaaacga
     1681 caacaccgcc ttatccgccc agttatccga gtatttctca ttttcataac ggtacagcaa
     1741 acccatacgg cggcggcggt gatgttcgtc aataaatttg gtgcgggaat atttcaaacc
     1801 tatgccccta atcaactttt gatcgccctt ccactcttct atattcggca caaaatacaa
     1861 gccgtcgcgg aaatcgtcgc cgtcgtacac cccgctcttg tctctaaact ttttcgcctc
     1921 gtccgtaccg taatactgtt tttccgtcat atcgcggata tcgtaacgct gtttggtatc
     1981 ctcaaacacg ccgccgacat aatgcctgcc gccgaagcgg tagcccagct tggcaagcca
     2041 cgaaccgctg cggtaatcca tcggatcggg caatatcctg ccgccgcccg tgtaagcttg
     2101 ggcggacagg ttttcgtggc gcgcctgcgc ctcccgcacc atcgcttctt cttcagcact
     2161 taaaggctga ttttgttcaa tacgttcttt tacccagcgg ttgagctggt tgttcaaata
     2221 gtttccgttg cctgccactt ttgccacagg cttgagctca ctctcgccct ccgccaggaa
     2281 atattcccct ccttcacttg gttttttaat gccgtatgtc tggcggaacg cgtccaaacg
     2341 gtttatgccg tatgccaccc catccgcaat atcgccgtgc gggtgcgttt cccgcccctg
     2401 acgttcggtt cggattagca gcccttccca accgtcttta ctgaaacccg cgccgagcga
     2461 cttcataaat tggcggtttt tactgccgta ggcggttttt gcctgtatcc cccagctttt
     2521 gccgtctgaa atcaggtctg ccgcctcttt ggtgcggaaa gcgaccgcgc cgccgagtgc
     2581 gccgctgccg tgatcggacg aaccggcacc tttgtcgatt tccaccgtgc tgatgttttc
     2641 atattcgatt tcgttgattg caccgctgcc gccgcgtccg ccgtatccgc tcaacgatcc
     2701 ctgcacggta aacgcctgta tttgggcaac gccgtcaacc gaaaccgcca cacggttttt
     2761 atccacgccg cgtatcgagt agccgccgct cgcgccgttg ccctgttcga caaccgccac
     2821 gcccggatcg tagcgcgtca ggtcgcggat accgagtacc tgttctttgt tcaacgtttc
     2881 cgacgttttg acgattttgc ccaaaccggt cgcctctttc gatcgccgtc ccactttggc
     2941 agcacggacg gtaacctctt tcagggattg ggtctgcgcc gcatcaggtg ccgccgtttc
     3001 agggtttgcc gcatatgacg ggaaggcggc ggcaacagcc aaggcagtca gggtaagctg
     3061 aaaaccgtgt ttcttattca tttttccacc tctttattat ctttcttcgc accgaatacc
     3121 acgccgaatt ggggtttaac ttcaggtttt aactgttcaa catcagcatc agcatcaaca
     3181 tcaacatcaa catcaacatc aacatcagct tcaactttat tttcagtacc ttcagttata
     3241 ccaagagatt tcccatcatt attgaaaata ataccgccca attcctccgc cttcgggccg
     3301 taaaatcctc cttctacacg aagatcatta gctttgaaga tctgcggttt ggtcgaaccc
     3361 tgcccggaaa ggtcgatgcc gtcatcccga gtgcgcgctg tcgcatggaa accgttgccc
     3421 tcaatcacgc cgttttcaat acggaaagca ggttctacac cgtttttctc cgtcagcgtt
     3481 ccggaaatcg atttcttgcc gaaatcaacg gtaaatactg cttttgccgc ttctttatcc
     3541 gcatgattgt cccattgaat gggtttgccg atacgcgctt cccaagtgcc ggtatagcgt
     3601 gcttctccag tttgcggaat attcgtttct gccgtgcgga tacctttcag gaaaaggtcg
     3661 atatccctgc ctttagaggc ttccgggaca ggcaggatgg cgtttgaact gccgttgcct
     3721 tctgccgacg attcttcttc aggttcttca gcttcgtctt cttcgccgtc ttcgttttct
     3781 gtggcttcgt cttcttcgct gccttcatct cctgcggctg catcttcggt gccttcttct
     3841 tcatcgccga tttcgtcttc gctttcttcg ccattatcaa tgtccgaatc ctcttcgtcc
     3901 tgcgccttcg gtttggcggc ggggcgttcg gtttttatcc gtccgagttt cacataggtc
     3961 aaaaagtcgc aacaagcact gacggtcatt ttcctgccgt cggcaagctc gatggttttc
     4021 tcttggctaa ccaaaggaat ttcatgccct tcgacaagaa gtttgtcggg atgaccaaaa
     4081 tcgggcatag gagaaatggc aaacggtcgg ggattttcac cacttgcctc atcaacggaa
     4141 attttcagag aatccaagat tttggtgtgt tttccagacg gcacggggct attttgtttg
     4201 cctgcgaata caccgaatac gctgttgtcg ttgctgataa accgtccggc aagctcttcc
     4261 cccttatcgc cgaaaaaacc gccctcaagc cgctgatcgg catcggcatg gaaaaacaaa
     4321 tgctccttat tggcatggct tttcgctaaa tcaggattga ccttggcact gccggtaaag
     4381 cggttgccgt ttaaatcggc agtgatgttg taaatggtca gcggtttttg cttctcactg
     4441 ggtttgacat attggttttt aatcagctcg cccgtcaggg ttttgttacc gaaatctacc
     4501 gtatatttag caggatgttt ttccctttcg tcgacatcct tagccgcata agaagttgca
     4561 ccaacatcgt taccataaaa tgtgtaataa cccaaattgt caatgccaac cgccttacct
     4621 gctcgatgac gtttggcatc ggtcatatat tgccagttac cagaatattc caccgttccc
     4681 gcactcggta aagattggga aggacgttct ccggaataat atacaaaacc gtcataacct
     4741 aagcggttgg aaaactgctt gtaatctgaa gtccacttaa tttcatcttt tccctttaca
     4801 tatacataac ctgcatctac aaatttataa tcatattttt tattttcctt ttctgatgtc
     4861 ctaatttcta catcggaatc acgtttatga atttcgcttt taagttgttg aagtttattt
     4921 ccttttgaac cgtataaaaa cagaacatca ccttcttgaa acgacagctt ttcttctgct
     4981 tgtttgctat ttggaatttc cgtgccatct tcacgatgaa aagcagtatt ccgccttggc
     5041 agccgcattg ccgcaccgac ggcgggccgg ttgaccggcg tgatttctat agaaggtttg
     5101 gcagggggcg gagtgggaac gtccttagac ttgaaagtga cggggtacgc ggtcggcgtt
     5161 gattcgacaa caggctgcac gccgaaattg ccgccgatac aagatgccaa aagtaagggc
     5221 aacaagacaa tgccgccata attcggttta cacatcccta cttttcctcc tatttgatta
     5281 ataataatta tcattatatt aatatgtaca gataatatca acccgttttt atagtgaatt
     5341 aacaaaaatc aggacaaggc gacgagccgc agacagtaca gatacattcc gtcattccca
     5401 cgaacctaca ttccgtcatt cccacgaacc tgcaccacgt cattcccacg aaagtgggaa
     5461 tccagttcgt tcggtttcgc ttgttttaag tttcgggtaa cttctacttc gtcattccca
     5521 cgaacct
//
LOCUS       DAXHKG010000122         5517 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.122, whole genome shotgun sequence.
ACCESSION   DAXHKG010000122 DAXHKG010000000
VERSION     DAXHKG010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5517
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.122"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..953)
                     /gene="mafA"
                     /locus_tag="ACFMWP_001714"
     CDS             complement(<1..953)
                     /gene="mafA"
                     /locus_tag="ACFMWP_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC5892276.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQG"
     gene            complement(1137..1856)
                     /gene="pyrH"
                     /locus_tag="ACFMWP_001715"
     CDS             complement(1137..1856)
                     /gene="pyrH"
                     /locus_tag="ACFMWP_001715"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HFC5892277.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(2073..2927)
                     /gene="tsf"
                     /locus_tag="ACFMWP_001716"
     CDS             complement(2073..2927)
                     /gene="tsf"
                     /locus_tag="ACFMWP_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HFC5892278.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(3056..3784)
                     /gene="rpsB"
                     /locus_tag="ACFMWP_001717"
     CDS             complement(3056..3784)
                     /gene="rpsB"
                     /locus_tag="ACFMWP_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HFC5892279.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(3985..4194)
                     /locus_tag="ACFMWP_001718"
     CDS             complement(3985..4194)
                     /locus_tag="ACFMWP_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892280.1"
                     /translation="MWHIVAIGYLFVAVMFSAAQPSIARTLIYLVFWAVLPTVFTVFV
                     VTIRRRNRLMKQQEQAEFEQQRAQR"
     gene            4272..4853
                     /locus_tag="ACFMWP_001719"
     CDS             4272..4853
                     /locus_tag="ACFMWP_001719"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HFC5892281.1"
                     /translation="MRNEEKHALRRELRGRRSQMGWDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            4914..5504
                     /locus_tag="ACFMWP_001720"
     CDS             4914..5504
                     /locus_tag="ACFMWP_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HFC5892282.1"
                     /translation="MSERIILPVLSLGGVRLEPLDVHHEMGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         1228 a         1262 c         1536 g         1491 t
ORIGIN      
        1 ccttgtctat gttgtcgcac tacttcatcg ctgtatccat acccctcatg actgttatca
       61 gtctctacgg atggggcgga gttacccgta tgattgccgt atggtcggat atcggagaaa
      121 tcgaccatta atccttccgt cggtttaatt cctttgctta ctttatacgg ccccatccac
      181 aatgcgtaat tttctttata ggcagcttca aacgcattgg ttttgggttt gatgagcaat
      241 tttttattgg ttctgtctac tgcgaaatat tccagttttg tttgggcttt cagtgtttcg
      301 gcattgtata ggtgcatttc ggttctgttg cgtatcgttc cgaatacgtc gatgttaata
      361 aacacatctg tatcggcatt ggcaggagaa acaacgtcta tgccgcgcag gaaaaatacg
      421 gtctgtacca agtgggaaag aaaggcagtg tcgcgcgggt tagtcgtcaa ggtttcattt
      481 cgataatccc ccatcccgcc aatatttaag cccagactgc ttttacttcc gctaccgtct
      541 gattgggtgc gagagagtgc aggggcatta agtgtagata aagaagtggt taaacctgtc
      601 aaaccgcctg atgttgtttc agcggtggtt tcgtaacgtg gataggtgta atcggtacgg
      661 acggcagggc tgtttatgta ttcgccacga atcagtgcat caatggagta gcgaccccct
      721 gtcaaactgc ctgaaccttg gtcgcccata gttgcaatgt acaatgcaac ttttcgtccg
      781 tgtaatgcct gtaaatccat gtctttaacg gcagctctgg cagaagcggc cacaagttct
      841 tgttcgaccg caaagcgttt acctccgcca tgcgatggaa tacctgtcag tgtcccgcag
      901 gcggataaaa taaaaactga aaaaagaata ggtatcagca gccgtgcttg catagatttt
      961 ctcctttgat gaaaaacaaa ttgtatcaaa attgtaaata tagtggatta aatttaaacc
     1021 agtacggcaa ggcgaggcaa cgccgtactg gtttaaattt aatccactat aatctccata
     1081 taataaatgg ctgtctgaag cccatatgcg actatatctg ccgacactat ggtcaatcag
     1141 cagtgaacca gcgtaccttc gttttcaccg gttactacac gtttgagcga gccttcttta
     1201 gcaatgccga atacgacaat attgagcttg cgttcgcggc agagggcgaa agcggtggca
     1261 tccatcactt tgaggttttt caacaaggct tcgtcaaaag taatggtttc gtagcgcgtg
     1321 gcggatgagt cttttttggg gtctgcggtg tacacgccgt caacgttggt ggctttgagc
     1381 atcacgtcgc agttcatttc cgcaccgcgc aatgcggcgg cagtgtcggt cgtgaagaac
     1441 gggttaccgg taccggcggc aaaaatcacg actttgcctt cttccaaata ttggatggct
     1501 ttggggcggg cgtaggtttc agcgatttgc tgcatagaca gtgcggattg tacgcgcgct
     1561 ttgatgccta aagtttcaaa tgcgtctttg agtgccaacg cgttcatcac ggtcgccatc
     1621 atgcccatgt agtcggcggt ggcgcgatcc atgctgcctg cttgggcgga tacgccccgg
     1681 aaaatattgc cgccgccgac aacaataccg acttgcacgc ccattttaac gacttcggca
     1741 atttcgccga cagtttgaac gatggtatcg tgattgatgc cgaacggatc ggaacccatc
     1801 agggattcgc cggagagttt cagtaatacg cgtttgtatt tgatttgctg tgtcatggat
     1861 accttgcttt cttgaatgtc gtcggtcgga gttgggtcgt ctgaatttca aacggtcgga
     1921 atattaatga tagggtgtgt cggtttatta ttgttttgtt ttaagacggt ctgaatattc
     1981 ggtcgtctta aaataggtac cgcaaacggt tttctcaaaa aaaagcaccc tgattcgttt
     2041 ggaatccagg tgctttcttt ttcataagtg ccttacactt tggcggctgc ggctacttcg
     2101 gctgcgtagt cgacaacggc tttctcgata ccgtcgccta ctttgtagcg gacgaagctg
     2161 accacttcag tgccgttttc tttggcgaat tgggcaacag tttgatcggg gttcatcacg
     2221 aatgcttggc cgttcagagt gatttcagcc aagaatttgc gaatacggcc ttcaaccatt
     2281 ttagcggcga tgtcggcagg tttgccggaa gcgatggctt gttcggtgta gatgtggcgt
     2341 tctttttcaa cggtttcggc atctacttcg gcttcgctta cgcattgtgg tttagcggca
     2401 acaatgtgca taccgatttt gcgtgctacg tcttcagagc ctttgtactc aaccaatacg
     2461 ccttcggtcg ccaatgcgcc gtggatgtag gcaaccagtt ggttggcagt gtcgatcact
     2521 tggaagcgac ggacagacat gttctcgccc aatttggcga tgatggcttt gcgttctgct
     2581 tcaaccagtt cgctcagttc ttcaacagaa gccggttttt tctcggcggc agttttcgca
     2641 acgaagttgg caaattctac gaagcccgcg tctttagcaa cgaagtcggt ttcgcagttt
     2701 acttcgacca atgcgccgac attgccgttg atcgcgtaag ccaatacgcc ttcggcagca
     2761 gtacggccag ccagtttacc ggctttcgca ccagatttaa tacgcaggat ttcttcggct
     2821 ttgtcgaagt tgccttcggc ttcaaccaag gcttttttgc attccatcat gcccaggccg
     2881 gtagcagcgc gcaggtcggc aaccattttt gcagtaattt ctgccatttt gaatctccta
     2941 gatttttggg aaatacggaa aggattttcc gcattcggga atcgtgtgcc gcgaacggac
     3001 gttcagacgg catatttgag aaaaggggca taacgcccct cttcggtttg ccggattact
     3061 cggcagcggc ttcttgggca gcggctacgg tttcttgcag cgcttggttt ttgccttcca
     3121 aaactgcgtc agcgatgccg cggcagtaca ggcggatggc tttggcggag tcgtcgttgc
     3181 cggggatgac gtatttcacg ccgtcagggc tgttgttggt atcgactacg gcgataacgg
     3241 ggatgcccag tttttcagcc tcgaccagag tacctttttg gtagccggta tcgataacga
     3301 aaatcgcgtc gggcaggcct ttcatgtttt tgataccgcc caaagaacgt tccagttttt
     3361 caacatcgcg ttgcatttcc agaatttctt ttttgctgaa accgctttcg gcagcatttt
     3421 ccaaggctgc ggttttttct tccaggcgtt tgatggattg cttaacggtt ttgtagttgg
     3481 tcagcatacc gcccaaccaa cggtgatcga cgaaaggcat gccggcgcgg gtcgcttctt
     3541 cgcggatgat gtcgcgggct tggcgtttgg tacctacgaa caatactgta cctttgttgg
     3601 caaccagacg acgtacggct tcttgcgcgt cttggaacat cggcagggtt ttttccaggt
     3661 tgacgatatg gattttgttg cgcgcaccga aaatgtattg agccattttc gggttccaga
     3721 aacgggtttg gtggccgaag tggacaccgg cttcaatcat ctgacgcata gtaatttgag
     3781 acattttgat ttccttgaaa gggttaaggg cacacattca atcgcataga acttgataga
     3841 ccgcgcctat tgtcaagcac ccttcggcga aagtgggcat aagttttaaa aaataaaaga
     3901 gtgtttccga aatggaaaac tgacggatta tagcggataa gaggtcgtct gaaaagggat
     3961 tcagggtttt gtgccgctgt ctttttaccg ttgtgcacgc tgctgttcga attctgcctg
     4021 ttcctgttgc ttcatcaggc ggttgcggcg gcggatggtc acgacaaaga ccgtgaacac
     4081 ggtgggcagc accgcccaaa aaaccaaata aatcaaggtg cgcgcaatac tcggctgcgc
     4141 ggcggaaaac atcacggcaa caaaaagata gccgatggcg acaatgtgcc acattgtgtg
     4201 cgtcctgttt gaatgttaac aaaatcgtta taatcgcaac attctaccgc aatcctgaaa
     4261 ggccgtctga aatgaggaac gaggaaaaac acgccctgcg ccgcgaatta cgcgggcggc
     4321 gttcgcaaat ggggtgggac gtgcgggcgg cggcaacggt aaaaattaac cgcctgctca
     4381 aacgttatat caagcacggt cggaaaatcg gcgtgtattg gccgatgggc aaggaattgc
     4441 gtttggacgg ctttgtccgc gcggcgcaaa aacgcggcgc aaaactttat ctgccttata
     4501 tcgaaccgcg ttcgcggcgg atgtggttta cgccgtatcc tgaaagcgga atggaacggg
     4561 agcgcatacg gggcagggcg aggttgaacg tgccgcagtt tgcagggcgc aaaatccgcg
     4621 tgcacggttt gtcggtattg ctcgttccgc ttgtcggcat agaccgcgaa ggctaccgtt
     4681 tggggcaggc aggcggctat tacgatgcga cgcttgcagc gatgaaatac cgtttgcagg
     4741 caaaaaccgt gggcgtgggc tttgcctgcc agttggtgga cagactgtcg gtcgaggcgc
     4801 acgacctgcc gctggacggt tttgtgtcgg aggcggggat attgtgtttt tagccgttca
     4861 gacggcattt tgaacggaaa tgccgtctga aggcggaata ttgggagaaa aggatgtcgg
     4921 aaaggataat actgccggtc ttgtcgttgg gcggcgttcg tctcgaaccg ttggatgtgc
     4981 atcatgaaat gggtttgcgc gaggcggttt gcgatgggga agtttggaag ctgggagtaa
     5041 cgtccgcgcc ccatccggat agggtggcag actatatcgg gacagcattg gcaacgcgtt
     5101 tggcgtttgc ggttgtcgat gaagaggcgg gcagggtggt cgggacaacg gcgtattatc
     5161 attttgaacc gcagattccg cgtttggata tcggattcac atggtatgcg gcatcggcac
     5221 ggcggacacg gataaacacc tgttgcaaaa tcatgctgtt ggattacgca tttgatgttt
     5281 tggcttgccg ttgcgtggga tggcgcacgg atattctgaa ccttgcctcg caacgtgcca
     5341 tcgaacggct gggtgcggaa aaagacggcg tgctgcgtat gcatatgctc cgtaaagacg
     5401 gcagtgtgcg cgatacggtc gtgtacagta tgctgaggga agattggtgc aaaaacaggg
     5461 aaatcctgac cggcaggttg gcagggtatg gcgtgcaggt gtgaggcagt attttca
//
LOCUS       DAXHKG010000123         5500 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.123, whole genome shotgun sequence.
ACCESSION   DAXHKG010000123 DAXHKG010000000
VERSION     DAXHKG010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5500
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.123"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..151)
                     /locus_tag="ACFMWP_001721"
     CDS             complement(<1..151)
                     /locus_tag="ACFMWP_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HFC5892283.1"
                     /translation="MLKTLTFAALHFSTAFSITYVLTGSIGVSGAVALVEPLINTVVF
                     YSGLTK"
     gene            273..1226
                     /locus_tag="ACFMWP_001722"
     CDS             273..1226
                     /locus_tag="ACFMWP_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HFC5892284.1"
                     /translation="MNQKKVVVLDADTLPGRTFHFDFPHELAVYGTTDAAETAGRVRD
                     AHIIITNKVMISADIIAHAPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHAPDVREGYVSFEDAVQTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1304..3358)
                     /gene="metG"
                     /locus_tag="ACFMWP_001723"
     CDS             complement(1304..3358)
                     /gene="metG"
                     /locus_tag="ACFMWP_001723"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HFC5892285.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTDFGIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQAE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFESRLKDVADSALLAKLTAQSEAIAECYESREYAKALRD
                     IMALADIVNEYVDANKPWELAKQEGQDARLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AARFLNLDAITWANTRVTLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIQTTPAPVE
                     DSKYEKVAEQAGFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIAA
                     FYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGDK
                     VG"
     gene            complement(3464..5302)
                     /gene="glmS"
                     /locus_tag="ACFMWP_001724"
     CDS             complement(3464..5302)
                     /gene="glmS"
                     /locus_tag="ACFMWP_001724"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HFC5892286.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGNIK
                     RVRRVGRVQLMEDAAREKHLNGSLGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEDLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGKLSPVVHTIPVQLLSYHVALARGTDVDKPRNLAKSVTVE"
BASE COUNT         1116 a         1332 c         1676 g         1376 t
ORIGIN      
        1 tttttgttaa tccactatag aaaacgacgg tgttgattag aggctcgacc agcgcgaccg
       61 cccccgatac gcctatactg cccgtcagta cataggttat actgaaggcg gtgctgaaat
      121 gcagtgcggc aaaagtcagg gttttaagca tcatcatctc tcggattgga cattgacgga
      181 gggatgataa agattatcat aaggctgtgc ggtttaaatt tgctatttgc tgttagtgta
      241 aataaatcat tttctaaata gggataaaaa ttatgaatca gaagaaagta gtcgtattgg
      301 atgcggatac tttacccggt cggacttttc acttcgattt cccacacgag cttgcggttt
      361 acggtacgac agatgctgcg gaaacggcag gacgggtgcg cgacgcgcat attatcatca
      421 ccaataaagt gatgatttca gcggatatca ttgcacacgc tccgcaactt gaattgattg
      481 ccgtcagtgc gaccggtgtg aacaatgtcg atattggggc ggcgaaggcg gcgggcgttg
      541 cggtatgcaa tgtccgcgcc tacggaaacg aatcggttgc ggaacacgcc tttatgctga
      601 tgattgcgtt gatgcggaat ttgcctgcct atcagcgtga tgttgcggca ggattatggg
      661 agaagtcgcc gtttttctgc cattacggcg cgccgattcg ggatttgaac ggtaaaacgc
      721 tggcggtttt cggacgtggc aatatcggac ggacgcttgc cggatacgcg caggcattcg
      781 gtatgggggt ggtgtttgcc gaacacaaac acgcgcccga cgtgcgcgaa ggctatgttt
      841 cctttgaaga tgcggtacag actgccgacg tgttgtcgct gcactgtccg ctaaacgccc
      901 aaactgaaaa tatgataggc gaaaacgaat tgcggcagat gaagcctggc gcggttttaa
      961 tcaattgtgg gcgcggcggg ctggtggatg aaaacgcgct gcttgccgca ctcaaatacg
     1021 ggcagatcgg tggggcgggt gtcgatgttt tgacggagga gccgccaagg ggcggcaatc
     1081 ccttgctgaa tgcacgcctg cccaatctga ttgttacgcc gcataccgcg tgggcgagcc
     1141 gcgaggcttt ggacaggctg tttgatatat tgttggcgaa cattcacgcc tttgtgaaag
     1201 gcgaggcaca aaatcgggtg gtttgagctt gtcgggatta tgggaaaaca atgccgtctg
     1261 aaggtctcaa gggtccagac ggcattgttt ttgatatttc tacttaaccg actttgtcgc
     1321 ccggttgcgc gcctgcgtcg acatcaagca gtttcagttt cccgtctgcc gtggcggcac
     1381 tcaaaatcat gccttcggat acgccgaatt tcgccatttt gcgcggggcg aagttggcga
     1441 cggcaatgac cattcttccg tttaactcgg cagggttggg gtaaaacgcg gcgatgccgg
     1501 agaagatgat acgtttttca aaaccgaaat cgaggtcgaa tttcaggagt ttggtgctgc
     1561 cttcgacggc ttcgcagttc aatactttgg cgacgcgcat atcgattttc ataaagtcgt
     1621 cgaaacccgc ctgttcggcg actttttcgt atttgctgtc ttcaacaggc gcgggggttg
     1681 tctgaatact ttgtttgttg gcttcgatta aatcgtccac ttgtttttgc tccactcgtt
     1741 gcattaaatg ttcgtatttg ttgatggcgt gttcgcccaa ggttaccctt gtgttcgccc
     1801 aagtaatcgc gtccagattg aggaaacgcg cggcgttggc ggcggtttgc ggcaacacgg
     1861 gggcgaggta ggcggtcaac atggtgaagg cgttgatgag ctcgctgcat acttcgtgca
     1921 ggcgtgcgtc ttggccttct tgtttcgcca gttcccaagg tttgttggca tcaacatatt
     1981 cgttgacaat gtctgccaat gccatgatgt cgcgcagggc tttggcgtat tcgcggcttt
     2041 cgtagcattc ggcaatggct tcgctttgcg cagtcagttt tgccagcaac gcgctgtcgg
     2101 caacgtcttt cagacggctt tcaaagcgtt tggcgataaa acctgacgcg cgggcggcga
     2161 tgttgacgta tttgcctacg aggtcgctgt tgacgcgcga gataaagtct tgcaggttca
     2221 aatcgatgtc ttcgattttg ctgttgagtt tggcggcgat gtagtagcgc atccactcgg
     2281 ggtttaaacc ttgttccaga taggatttag cggtgatgaa ggtgccgcgc gatttggaca
     2341 ttttttgtcc gtccacggtc aaaaagccgt gtgcgtacac gccggtcggg gcgcggtggc
     2401 cggagaagtg cagcatggca ggccagaaca gggcgtggaa atagaggatg tctttgccga
     2461 tgaagtggta catctcggtt tggctgtcgg ctttgaagta ttcgtcaaaa tcgacgccga
     2521 tgcggtcgca caggttttta aacgacgcca tgtagccgac gggcgcgtcc agccagacgt
     2581 agaagtattt gcccggcgcg tcggggattt caaagccgaa atacggcgcg tcgcgggaaa
     2641 tgtcccagtc ggacagcgtg gtttcttcgc cttcgcccag ccattctttc attttgttga
     2701 gggcttcggc ttgcagatgg ggcttgccgt cgtgcgggtt gttgccggaa gtccatgctt
     2761 tgaggaagtc ggcgcattcg cccagtttga agaagaagtg ttcggattcg cgcaattcgg
     2821 gtttcgcgcc ggaaacggcg gaatacgggt tgatcagttc ggtcggggaa taggtcgtgc
     2881 cgcagacttc gcagttgtcg ccgtattggt cttgggcgtg gcatttcggg cattcgcctt
     2941 tgacgaagcg gtcgggcagg aacatttgtt tttcggggtc gaaaagctgc tcgatgacgc
     3001 ggctctcaat cttgccgttg gctttcagcg cgcggtaaat gtcttgggaa aactgtttgt
     3061 tttcagggga atgggtgctg taataattgt cgtaaccgat gccgaaatcg gtaaagtcgg
     3121 cgaggtgctc ttcgcgcact ttggcaatca tgtcttcggg cgcgatgcct tgtttttgcg
     3181 cggcaagcat tacgggcgtg ccgtgagtgt cgtcggcgca gcagtagtag cattcgtggc
     3241 cgcgcagttt ttgaaagcgc acccaaacgt cggtttggat gtgttcgacc atatggccga
     3301 ggtggatgct gccgttggca tagggcaggg cggaggtaac gaggattttg cgtgtcatgg
     3361 tttatgcttt tggggataga tggtaaaggg gaattatacc gtaaatgccg tctgaagcct
     3421 gaaaaatcag gcttcagacg gcatgttcgc aaacaatccg gacttattcg accgtaacgg
     3481 atttcgccag gttgcgcggt ttgtctacat cggtgccgcg tgcgagggcg acatggtagg
     3541 aaaggagctg cacggggata gtatgcacga cgggggacag tttgccgacg tggcgcggtg
     3601 cgcggataac gtgcacacct tcggtggcat taaaattgct gtcgaggtcg gcaaagacga
     3661 aaagttcgcc gccgcgcgcg ccgacttcct gcatattggc tttgactttg tccaacaggc
     3721 tgtcgttggg tgcgatgacg acgacgggca tgttttcgtc caccaaggca agcggcccgt
     3781 gcttcagttc gccggcagga taggcttcgg cgtggatgta ggtgatttcc ttcagtttta
     3841 acgcgccttc gagggcaatc gggtaatgga tgccgcgccc caaaaacagc gcgctggttt
     3901 tcttggcaaa ctgttgcgcc caggcggcaa tttgcggttc gaggtttaaa gcgtgctgca
     3961 cgctgccggg aagctggcgg agttcttcgg tgtaacgtgc ttcgtcttct tcggaaacca
     4021 aaccgcgcac tttcgccagc gttaccgcca aaccgaacag cgcaaccagc tgcgtggtaa
     4081 atgctttggt tgaggcgacg ccgatttccg caccggcacg ggtataaagc acgaggctgc
     4141 tttcgcgcgg cagggcggat tccatcacgt tgcagatgga gaggctgtgg cggtgtccca
     4201 aggattttgc gtatttcaac gcctccatcg tgtccagcgt ttcgccggat tgggaaatgg
     4261 taatgaccag ttggtccgga tcggcaatca cgctgcggta tcggtattcg ctggcgattt
     4321 cgacatcggc cgggattttg gcgatggatt ccaaccaata tttggcggtc agcgcggcgt
     4381 aataggacgt gccgcaggca aggattttga cgctgcggat gctttcaaac acgcttttgg
     4441 cgtttttgcc gaagttttcg gggatgaagc cgccgtcgag gaaaacctcc gccgtgtctg
     4501 caatcgcgcg cggctgctca tggatttcct tttgcataaa gtggctgtac ggtcccagtt
     4561 ccaaagaggc gagcgagagt tcggatacct tgactttgcg ttcggcaggc aggccgtttt
     4621 tatcggtcag ccttttgatg ccgtctgaag ccagcagcgc gatgtcgccg tcttcgaggt
     4681 acgccacgcg gcgcgtaaag gcgatgacgg cggatacgtc cgaagcgata aaggtttcat
     4741 cgtcgcccaa agcgaccaaa agcgggcagc ccatacgcgc cacgactaat tcatcaggct
     4801 tgtcttgggc aataaccgcg atggcgtatg cgccgtggaa acgtttgacc gcttcctgca
     4861 cggcttcaaa cagcctgccg ccgttttgcg cgtattcgtg attgatgctg tgggcgatga
     4921 cttcggtatc cgtttgcgat tcaaaacggt atcccaaatc ttccaaacgt ttgcgttcgc
     4981 tttcaaagtt ttcgatgatg ccgttgtgca cgaccgcaat cataccgccg ctgatgtgcg
     5041 ggtgggcgtt cggctcggta acgccgccgt gtgtcgccca gcgcgtatgc ccgatgccca
     5101 aactgccgtt caaatgcttt tcacgcgccg catcttccat taactgcacg cgcccgacac
     5161 ggcgcacgcg cttgatgttg ccgtcggtgt tgacggcaat gcctgatgaa tcataacccc
     5221 ggtattcgag gcgtttgaga ccgtcggtca gaaaatcgac gacattgtga tgggcgcgga
     5281 tggcgccgac gataccgcac ataactgttc cttagtatcc ggttgaaaaa aaaacaggcg
     5341 cggacggctc ccgtgccgca ccttccgctt cggattataa accgcctccc gcgccggaaa
     5401 acagcaaaat gccgtctgaa ggcttgggct tgctcaaaaa agggagggat ttccccgcct
     5461 gaccgggatg ggcgttcaga cggcattgcc tgctgccggt
//
LOCUS       DAXHKG010000124         5457 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.124, whole genome shotgun sequence.
ACCESSION   DAXHKG010000124 DAXHKG010000000
VERSION     DAXHKG010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.124"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..242)
                     /locus_tag="ACFMWP_001725"
     CDS             complement(<1..242)
                     /locus_tag="ACFMWP_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
                     /protein_id="HFC5892287.1"
                     /translation="MEDKQGMKKAVAGVMTDASSDGRKPATASNLPPLSNRGGTETET
                     AGRVQEVFECYEKYITDGKGNLLGVPLRRGVSDSAF"
     gene            344..654
                     /locus_tag="ACFMWP_001726"
                     /pseudo
     CDS             344..654
                     /locus_tag="ACFMWP_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684347.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(711..1769)
                     /gene="trpD"
                     /locus_tag="ACFMWP_001727"
     CDS             complement(711..1769)
                     /gene="trpD"
                     /locus_tag="ACFMWP_001727"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HFC5892288.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMRGQVLPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(1834..2424)
                     /locus_tag="ACFMWP_001728"
     CDS             complement(1834..2424)
                     /locus_tag="ACFMWP_001728"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HFC5892289.1"
                     /translation="MLLFIDNYDSFTYNIVQYFTELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVYHSGKGMFKGLPNPVTCTRYHSLVIERGTLPECLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEYGHDMLNNFFIEFQNFKPQKI"
     gene            2846..5122
                     /gene="znuD"
                     /locus_tag="ACFMWP_001729"
                     /gene_synonym="tdfJ"
     CDS             2846..5122
                     /gene="znuD"
                     /locus_tag="ACFMWP_001729"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HFC5892290.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRP
                     RATSGLLHTSTASDKILSGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTVSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDDAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSAISEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGVHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
BASE COUNT         1397 a         1534 c         1247 g         1279 t
ORIGIN      
        1 atgaacgccg aatcagatac accgcgacga agcggaacgc ctaaaaggtt tcctttgccg
       61 tctgttatgt acttttcata acactcgaag acttcttgaa ccctgcccgc cgtttcggtt
      121 tctgtacccc ccctgttaga taagggggga agatttgaag cggttgccgg cttcctgccg
      181 tccgatgacg cgtccgtcat cacgccggca accgcctttt tcatcccttg cttatcttcc
      241 atggtgcgaa tcctcaaaaa cgggcaaaaa aaagccctgt tacttgtaga aagtaaagga
      301 cgttaatttt tgttaatcgt cccttcttag ggacgcaata tataaggttt ataccgtcgt
      361 tgttcctaat gcgcaatcag cgacattgtt gccaattatc cgaaagaaag ttaagcctga
      421 tggcattgta tacacggata cctttcgtag ttatgatgtg cttgatatta gtgaatttag
      481 ccatttacgt aagtttaacg gcattcccaa agagcatttg gggctgcatt taaagaaatg
      541 ccaatggcat tttaaataga atctcaaatt cagattttaa gacaattagt taatgggaat
      601 ttggtctggt tatctagtac agccccaagt ttttatataa aaacagtttg gtaagttctc
      661 ttcgtgaagt gcttatgttt tgccacaaaa gttccataat catggcggca tcacccaagc
      721 tccatctttc caagaaaatg gcatctttgt tgtggttgaa aaccgacaaa ctcctctttt
      781 ttcgatttgg ccctgcctga atcgatggct tcccgtgcgg cagatatgcc gtctgaaagc
      841 gaagcagcga catttccggc atacagggcg gcggcggtgt tgagcaatac gatatcgcgc
      901 gcagcccctt ctcttccttc cagcacctca ttcattttca acaaagattc ctgagtattg
      961 gcaactttga tttcatccaa attgcggcgg gtttcgatac cgaaatcttc tgggcggatg
     1021 tcgtattcgc tgatttttcc gtctttgagc tcggcaacgc gtgttttgcc cgtcagtgta
     1081 atttcatcca aaccgccctc cccgcaaaca accaaaacgt gttttgaacc aagttgttgc
     1141 aagacccgcg acaaaatgcc acacaaatcg gtgtggaaca cgcccaaaag ctggttcggc
     1201 gcgcccgcag gattcgttaa cggacccaat atgttgaaaa tacttcggaa accgagcgaa
     1261 cggcgtacag gggcgacatg gcgcatggca ctgtggtgat tgggcgcgaa cataaacccg
     1321 atgccggtct gcctgatact ttgggcaacc tgttcgggag tcaggttgag gtttgcgccc
     1381 atctgctcca ccacgtcagc cgcaccgctg gaggaagaga ccgaccggcc tccgtgtttg
     1441 gcaaccttcg cgcctgccgc tgcggcaaca aacatcgaag tcgtcgaaat attgaaggtt
     1501 ttcgcgccat ccccgcccgt accgacgata tcgaccagcc cctctgcatt ctccagcggc
     1561 acttttgtcg caaactcacg catgacggct gcagctgcgg taatttcgga aacggtttca
     1621 accttgatac gcaatcctgt caaaatggcc gctatctgct ccggcagaac ctgtcctctc
     1681 ataatctgac gcatcaagtc ggtcatttca tcgtaaaaca actcgttatt gctgattaat
     1741 cgttcgatgg cctgttgcgg tgtaatcatt tttttgtcct ccgttcaata ttcggacgaa
     1801 aatgccgtct gaagggcttc agacggcatc acgtcagatt ttttgcggtt tgaagttttg
     1861 aaattcgata aaaaaattgt tcaacatatc atgtccgtat tcggtcagca gagcttcagg
     1921 gtggaattgt accccctcaa cggcatattc cttatggcgc acgcccataa tctcgccgtc
     1981 ttccgtccat gccgtgattt ccaaacattc gggcagcgtg ccgcgttcga taacgaggct
     2041 gtgataacgc gtacaggtaa ccggattggg caaaccctta aacataccct tgcccgaatg
     2101 gtacacgggc gacaccttgc cgtgcatcag cgttttggcg cggactatcc tgccgccgaa
     2161 cgcctcgcct atcgtctgat gcccgaggca cacgcccata atcggcagcc tgccggcaaa
     2221 atggcgcatc gccgccacgg aaatccccgc ttctttgggc gaacacggac cggggccgat
     2281 aacgagatat tgcggattca atgcctcgat ttcctccaac gtaatatcat cgttgcggcg
     2341 cacggcaact tcctgcccca attcagtgaa atactggacg atgttgtaag taaaactgtc
     2401 gtaattgtcg ataaacaaaa gcattttgtg attaacctat tgatttataa tttgtttgtt
     2461 attaactgca tttccgatac ccccatccat accctcttat atcttagcgt gcccgatgcg
     2521 ccctcgtgaa cctggcgcag agcctcgcgt tctgacaagt acgccatttt gccacctttt
     2581 cgaccgttcg ggaacgtgcc gtttttatgc actcataaat tttggttatc ccgcagccga
     2641 acataatggg caaacacagc ggaatctgcg tcaacatcaa ccgcgccccc gaaggacggc
     2701 ggatacaaat ggacaccgcc cgatgccgca accgtttcat ttgaaaaact tttgcctatg
     2761 ccctctgagt gttctcaaaa tcttatgata taaggaatgc aatgttatat aataacaaac
     2821 ttttgaaatg cgacgagaag ccaaaatggc acaaactaca ctcaaaccca ttgttttatc
     2881 aattctttta atcaacacac ccctcctcgc ccaagcgcat gaaactgagc aatcggtgga
     2941 tttggaaacg gtcagcgtcg tcggcaaaag ccgtccgcgc gccacatccg ggctgttgca
     3001 cacttcgacc gcttccgaca aaatcctctc cggcgatacc ttgcgccaaa aagccgtcaa
     3061 cttgggcgat gctttggacg gcgtgccggg cattcacgcc tcgcaatacg gcggcggcgc
     3121 gtccgctccc gttattcgcg gtcaaacagg caggcggatt aaagtgttga accatcacgg
     3181 cgaaacgggc gatatggcgg atttttcgcc cgatcacgcc attatggtag ataccgcctt
     3241 gtcgcaacag gtcgaaatcc tgcgcgggcc ggttacgctc ttgtacagct cgggcaatgt
     3301 ggcggggctg gtcgatgttg ccgatggcaa aatccccgaa aaaatgcctg aaaacggcgt
     3361 atcgggcgaa ctcggattgc gtttgagcag cggcaatctg gaaaaactca cgtccggcgg
     3421 catcaatatc ggtttgggca aaaactttgt attgcacacg gaagggctgt accgcaaatc
     3481 gggggattac gccgtaccgc gttaccgcaa tctgaaacgc ctgcccgaca gccacgccga
     3541 ttcgcaaacg gtcagcatcg ggctgtcttg ggttggcgaa aaaggtttta tcggcgtagc
     3601 gtacagcgac cgtcgcgacc aatatggtct gcctgcccac agccacgaat acgatgattg
     3661 ccacgccgac atcatctggc aaaagagctt gattaacaaa cgctatttac agctttatcc
     3721 gcacctgttg accgaagaag acatcgatta cgacaatccg ggcttgagct gcggcttcca
     3781 cgacgacgat gatgcacacg cacacaccca cagcggcaga ccgtggatag acctgcgcaa
     3841 caaacgctac gaactccgtg ccgaatggaa gcaaccgttc cccggttttg aagccctgcg
     3901 cgtacacctg aaccgcaacg actaccgcca cgacgaaaaa gcaggcgatg cagtcgaaaa
     3961 cttttttaac aaccaaacgc aaaacgcccg catcgagttg cgccaccaac ccataggtcg
     4021 tctgaaaggc agctggggcg tgcaatattt acaacaaaaa tccagtgctt tatctgccat
     4081 atccgaagcg gttaaacaac cgatgctgct tgacaacaaa gtgcaacatt acagcttttt
     4141 cggtgtagaa caggcaaact gggacaactt cacgcttgaa ggcggcgtac gcgtggaaaa
     4201 acaaaaagcc tccatccgct acgacaaagc attgattgat cgggaaaact actacaacca
     4261 tcccctgccc gacctcggcg cgcaccgcca aaccgcccgc tcattcgcac tttcgggcaa
     4321 ctggtatttc acgccacaac acaaactcag cctgaccgcc tcccatcagg aacgcctgcc
     4381 gtcaacgcaa gagctgtacg cacacggcaa acacgtcgcc accaacacct ttgaagtcgg
     4441 caacaaacac ctcaacaaag agcgttccaa caatatcgaa ctcgcgctgg gctacgaagg
     4501 cgaccgctgg caatacaatc tggcactcta ccgcaaccgc ttcggcaact acatttacgc
     4561 ccaaacctta aacgacggac gcggccccaa atccatcgaa gacgacagcg aaatgaagct
     4621 cgtgcgctac aaccaatccg gtgcggactt ctacggcgca gaaggcgaaa tctacttcaa
     4681 accgacaccg cgctaccgca tcggcgtttc cggcgactat gtacgaggcc gtctgaaaaa
     4741 cctgccgtcc ctacccggca gggaagatgc ctacggcaac cgtcctttca tcgcacagga
     4801 cgaccaaaat gcccctcgcg ttccggctgc gcgcctcggc gtccacctga aagcctcgct
     4861 gaccgaccgc atcgatgcca atttagacta ctaccgcgtg ttcgcccaaa acaaactcgc
     4921 ccgctacgaa acacgcacgc ccggacacca tatgctcaac ctcggcgcaa actaccgccg
     4981 caatacgcgc tatggcgagt ggaattggta cgtcaaagcc gacaacctgc tcaaccaatc
     5041 cgtttacgcc cacagcagct ttctctctga tacgccgcaa atgggccgca gctttaccgg
     5101 cggcgtgaac gtgaagtttt aaaatcggac aggcaaacaa aaaaggtttt cagacggcat
     5161 tctgaaaacc ttttttcttt ttaatcaatt tgttaggaaa tatggcaaag acaaagaaca
     5221 aaccactatg ccatcattcc cattttcttt gtttcatcat tcttgctttc acgccgtcat
     5281 tctcgcaaaa gcagaaaaat caaaagcaga aacccatcat tcccgcgcag gcgagaatcc
     5341 aattcattcg gtttcagccg tttccgataa atcgccttag catttgggtt ttagattccc
     5401 actttcgtgg gaatgacggc gtaaaggttt ctgtttttta agttttaggt aactaat
//
LOCUS       DAXHKG010000125         5456 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.125, whole genome shotgun sequence.
ACCESSION   DAXHKG010000125 DAXHKG010000000
VERSION     DAXHKG010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.125"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(145..1941)
                     /locus_tag="ACFMWP_001730"
     CDS             complement(145..1941)
                     /locus_tag="ACFMWP_001730"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HFC5892291.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPAHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLTAKNIRIEHPNDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2399..3652
                     /locus_tag="ACFMWP_001731"
     CDS             2399..3652
                     /locus_tag="ACFMWP_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC5892292.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3807..5318
                     /gene="lysS"
                     /locus_tag="ACFMWP_001732"
     CDS             3807..5318
                     /gene="lysS"
                     /locus_tag="ACFMWP_001732"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HFC5892293.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
BASE COUNT         1179 a         1384 c         1605 g         1288 t
ORIGIN      
        1 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat atttgcttgc
       61 ggcaagatga aaacggtgcg ggatgttttg ggaaaccaat gccgtctgaa gggctttcag
      121 acggcatttt ttgcgccgtg ctgtttaacg cgccagcggt tcggtgcgtt tgatcagcca
      181 cgcttttgcc gcgccttcgg tcagcggctc gaggcggcgg cggacttcgg cgtggtagcg
      241 gttgacccag tcgatttcgc cgtcggtcat gagggcggtg tccatcaggc gggtgtcgat
      301 ggggcagagg gtcagggttt caaaacagag gaagctgccg aattcggttt cttgaggggc
      361 ggcgacggct tggttggcgg caaggttttc aatgcggatg ccccattttc ccgggcggta
      421 gagtccgggt tcgatggagg taaccatgcc ttttttcatg gcggtttcgg gcgtggcggg
      481 ggcggcgaag gcgatgcgct gcgggccttc gtggacgttg aggaaatagc ctacgccgtg
      541 tccggtgccg tggccgtagt cgcattgcgc ctgccacagg ggtttgcggc aaatcgcatc
      601 aatcagcggc gaggggatgt tttctgggaa cacggcttcg gcaagcgcga tatgggcttt
      661 gagaacgagg gtgttgtcgc gtttttgttc ggcggtgggt gtgccgacag ggacgacgcg
      721 ggtgatgtcg gtcgtgccgc ctttgtattg cgcgccggag tcgatgagca aaagcccgtt
      781 gccgctgatg gtgctgtggc tttcgggcgt tgcgctgtaa tgcggcagtg cgccgttggc
      841 gttgaagcct gcgatggtgt cgaaactcaa tgaaatgaag cctgggcgca cgctgcggtg
      901 gcgataaagc atggtgtcca cgtcgatttc ggtcaggctg ccgccgttgc cgatgatgtc
      961 ttcaaactcg gcgaagaaac cgcacaacgc cgcgccgtcg tgttccatcg cttcgcggat
     1021 gcgggcgatg tcggcttcgg atttgcagga tttgaacagc gtggacgggt tgattccctc
     1081 gataaggcgc acgctttcgg gcaggcgcac aagcgtgctg acggcggttt tgttcggttc
     1141 gataagcaac gcgccgccga tttgcgcgag tttgtcggca acttgggcgt aaggctcgac
     1201 cgtgatgcct gcggtttgca gcgcggcggc ggcttcggcg ttcagacggc atcggtcggt
     1261 aaacaggacg gcgttgtctt tgccgatcag caggaaggac acgaaaacag ggttgaaagg
     1321 tacgtcgctg ccgcgcaggt tggtcagcca ggcgatgtcg tcaagcgagg aaaccaagtg
     1381 gtaatccgcg cctttttccg ccatcacggc gcgcacgcgg gcgagttttt cggcggcggt
     1441 ttcggagacg taggcggggt cgtggatgaa cacggtttcg gcggggatag cgggacggct
     1501 tgtccacact tggtcaagca gatcgtttgg gtgttcgatg cggatgtttt tggcggtcag
     1561 ggattgcgcc aaagtgcgtt tgccggtgag cgagaccata tcggaaggga tgccgacggc
     1621 ggcgttttcg ggcaggtttg ccgcgagcca ttcgttatac ggcggcactt gcccgctttt
     1681 ttgcagttcg atgccgctgc ccgcaagctg tttggcggct tgttcccaat agcggctgtc
     1741 cacccatacg cccgcttcat cggcggtaac gacgaatgtg ccgaccgagc cggtaaagcc
     1801 cgacaattcg cggcgcgcct gccagtgtgc gggcaggtat tcggacaggt gggggtcggc
     1861 ggaagggatg acgagcgcgt ccaagccttg cgccttcatg gcttcgcgca atgcggacag
     1921 gtaattcgat acggtattca taataattcc tccaatcggg ttttgcggct tcagacggca
     1981 tggacggaaa tctgaaatgc cgtctgaaaa acataaccat cttatcaaat cgccagcctg
     2041 ctgcaaaacg gacgggctga tcggatggtg cgtgtttgcg cgaaaaaagc gatgtaaggt
     2101 tgtttgttgt aaaattttag gcataaaatg tcgtttcatg cctttttttg gaagtaatac
     2161 ggaaaatata gtcaagtttg agcatgaagt tctaatagtg tgtgttggca ggtatttgga
     2221 ttacgttaca atacgcgctt tcatcaaaat ttccctaccg ggcggtatcc tgtttttgaa
     2281 gacggtagga tttgggtttg tttgggggca atcccgccca aattggagca atagataggg
     2341 ctgtgtccga atatgcggct ctgtgtgttg aaacacggtt aaaaatacgg aagactttat
     2401 gtccgaacaa catatttcga cttggaaaag taaaatcaac gcactggggc cggggattat
     2461 gatggcttcg gcggcggtcg gcggttcgca cctgattgcc tcgacgcagg cgggtgcgct
     2521 ttacggctgg cagatcgcgc tcatcatcat cctgaccaac ctcttcaaat acccgttttt
     2581 ccgcttcagc gcgcattaca cgctggacac gggcaagagc ctgattgaag gttatgccga
     2641 gaaaagccgc gtttatttgt gggtattcct gattttgtgc atcctctccg ccacgattaa
     2701 cgcgggcgcg gtcgccattg taaccgccgc catcgtcaaa atggcgattc cctcgctgat
     2761 gtttgatgcc ggcacggttg ccgccttgat tatggcatcc tgcctgatta ttttggtgag
     2821 cggacgttac cgcgctttgg atcgcgtttc caaaatcatc atcgttactt tgagtatcgc
     2881 cacgcttgcc gccgccggca tcgctatgtc gcgcggtatg cagatgcagc ccgattttat
     2941 cgagccgaca ccgtggacgc ttgccggttt gggcttcctg atcgcgctga tgggctggat
     3001 gcccgcgccg attgaaattt ccgccatcaa ttctttgtgg gtaaccgaaa aacaacgcat
     3061 caatccttcc gaataccgcg acgggatttt tgatttcaac gtcggttata tcgccagtgc
     3121 ggttttggct ttggttttcc ttgcactggg tgcgtttgtg caatacggca atggcgaagc
     3181 agtgcagatg gcgggcggca aatatatcgg gcaattgatc aatatgtacg ccgttaccat
     3241 cggcggctgg tcgcgcccgc tggtggcgtt tatcgcgttt gcctgtatgt acggcacgac
     3301 gattaccgtt gtggacggct atgcccgtgc cattgccgaa cccgtgcgcc tgctgcgcgg
     3361 aaaagacaaa acgggcaacg ccgaattctt tgcctggaat atttgggtgg cgggcagcgg
     3421 tttggcggtg attttttggt ttgacggcgt aatggcgaat ctgctcaaat ttgcgatgat
     3481 tgccgctttt gtgtccgccc ctgtgtttgc ctggctgaat taccgtttgg tcaaaggtga
     3541 tgaaaaacac aaactcacat caggtatgaa tgcccttgca ttggcaggct tgatttatct
     3601 gaccggtttt accgttttgt tcttattgaa tttggcggga atgttcaaat gataacgatg
     3661 ccgtctgaaa ccgcaaaccg ctttcagacg gcattgtcgc gtttatggaa aaaaatgccg
     3721 acatcgcgta aaatatgcgc aaattttgtg attcggtcag gtcgtctgaa acagattgcg
     3781 cctgatttat tttttcggaa aaccctatga gcgaacaaaa ccatccgcaa accgagccgc
     3841 agttggacga aaaccaaatc atcgccctgc gccgcgaaaa actgcacaac atccgccaac
     3901 agcgcaacgc ctatcccaac gacttcaaac gcgacagctt cgccgccgat ttgcacgccc
     3961 aatacggcga aatcggcaaa gaagaactcg atccgcaagg cattcccgtc aaagtggccg
     4021 gccgcatgat gctgaagcgt caaatgggca aggcgagctt tgccaccatt caagacgtgt
     4081 ccgggcaaat ccagctttat ctgaacaaca aaggcgtgag ccaagaagtt ttggacgact
     4141 tcaaccattg ggatttgggc gacatcgtcg gcgcggaagg cactttgttc aaaaccaacc
     4201 acggcgaact gaccgtacgc gtgtccgaca tccgcctgtt gtccaaatcc ttgcgtccgc
     4261 tgccggacaa acacaaaggc ttgagcgatc aggaaaccaa ataccgccaa cgctatgtcg
     4321 atttgattgc caacgaagaa tcgcgcaata cctttatcaa acgcagccaa atcatccaat
     4381 ccgtgcgtaa ttttatggtg ggcgagcatt atctcgaagt cgaaaccccg atgatgcacc
     4441 cgattcccgg cggcgcgacg gcaaaaccct tcgttactca tcacaatgcc ttagatattc
     4501 cgctttacct gcgtatcgcg cctgagctgt atttgaaacg cctggttgtc ggcggcttgg
     4561 aacgcgtgtt tgaaatcaac cgcagcttcc gcaacgaagg catgtccgtg cgccacaacc
     4621 ccgaatttac gatgattgaa ttttacgaag ccttctccga ctacgaacgt atgatgcaga
     4681 tggcggaaga catcatccgc aacgcatcgc gcacagtaaa cggtacggca aacatcactt
     4741 acaatggcaa agaagtcgat ttggaaagcc cgttcgagcg tctgaccatc ctcgaagcca
     4801 tcaaaaaata caatccgcac tacaccgacg agcagttgaa cgatgcggaa tggctgaaaa
     4861 aagaaatcgt caaacacggt gaaagcctgc cgccgtcccc gggcatcggc agcctgcaac
     4921 tcgcgctgtt tgaaggttgc gccgagggca agctgtggaa cccgactttc atcatcgatt
     4981 acccggtcga agtttccccg ttggcgcgcg cttcggatac caaacaaggt ctgaccgaac
     5041 gtttcgaatt gttcgttgtc ggccgcgaac tggcaaacgg ctattccgag ttgaacgacc
     5101 ccgaagacca agccgaacgc ttcaaagcgc aagtggcgca aaaagacgcg ggcgacgacg
     5161 aagcgatgca ctacgatgcc gactacatcc gcgcgatgga gttcggtctg ccgccgactg
     5221 gcggttgcgg tatcggcatc gaccgcttgg taatgttgct gaccgattcg caaaccatcc
     5281 gtgacgtgat tctgttcccg cagatgcgcc ccgagtaatc ataaaaacag ttgaaatggc
     5341 aatgccgtct gaacccgatt ggattcagac ggcattttgt atggcaggat tgatagtgaa
     5401 ttaacaaaaa tcaggacaag gcggcgagcc gcagacggta caaatagtac ggaacc
//
LOCUS       DAXHKG010000126         5321 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.126, whole genome shotgun sequence.
ACCESSION   DAXHKG010000126 DAXHKG010000000
VERSION     DAXHKG010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5321
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.126"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            295..1728
                     /locus_tag="ACFMWP_001733"
     CDS             295..1728
                     /locus_tag="ACFMWP_001733"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HFC5892294.1"
                     /translation="MNEYSQLIKHPDISLSPISDSIGIGNPATGEILAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALASLAYEAGIPQDLLPVVSGSASEIGHEFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSAIYDEFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALAKGASCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1837..2625
                     /locus_tag="ACFMWP_001734"
     CDS             1837..2625
                     /locus_tag="ACFMWP_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HFC5892295.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDQWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            2993..4549
                     /locus_tag="ACFMWP_001735"
     CDS             2993..4549
                     /locus_tag="ACFMWP_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HFC5892296.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4566..5312
                     /gene="surE"
                     /locus_tag="ACFMWP_001736"
     CDS             4566..5312
                     /gene="surE"
                     /locus_tag="ACFMWP_001736"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HFC5892297.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKNPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         1248 a         1342 c         1515 g         1216 t
ORIGIN      
        1 gtttggattt ttgccatact ctaccacacg ttgcaactgc aatctttgtt ccttatatat
       61 tatcaaaggg ctgcattact tttctttcta aattaccatt gtataaaaag tatttttctt
      121 aaacgacagg gattgcgccc gcgccatatt cagacaccgc ccggatgttg cactgcccga
      181 tcggatgctt cagacggcat cggaagggtt tgcagttttg gaatatgaag atgataatgt
      241 ccgcgagatt gacggcattt gaaagcggtt attccgcata ccggaggata cgaaatgaac
      301 gaatattccc aattaatcaa gcatcccgat atttcccttt ccccgatttc agacagcatc
      361 gggatcggca atccggcgac gggtgaaatt ttggcgtatg tccgcaacac gggttcggac
      421 aaactgaaaa acctgattca aaaggcggcg gcagcgcaaa aattatgggc ggcgaaaact
      481 gctttggaac gcgccgacat attgtggcgt tggtattttt tagttaaaga aaacaaagaa
      541 gcactggcgc gcctgatgac gatggagcag ggcaaaagcc tgaccgaggc gcgcggcgag
      601 attgattatg cggcttcgtt tgtgcgctgg tttgcggaag aggcgcggcg gattgacggc
      661 gatgtgttaa cgagtgtaaa agcgtcgcaa aaactggttg tgttgaaaca gcctgtcggc
      721 gttaccgccg cgattacgcc gtggaacttc ccatctgcga tgattgcgcg caaggccgcg
      781 cctgctttgg cggtgggttg cgcgatgatc gtcaaacccg catcgctcac gcctttgagt
      841 gcgtatgcct tggcttcgtt ggcttacgaa gcgggcatac cgcaggattt gttgcctgtt
      901 gtcagcggca gtgcttcgga aatcggccat gaatttgcta cgaacccgat tatccgcaaa
      961 atcagcttca ccggctcgac cgaagtcggc gcaaaaattt ttgccgacag cgcggcggac
     1021 attaaaaaac tcagtttgga gctgggcggc aacgcgccgt ttatcgtgtt tgacgatgcc
     1081 gatttggaca aagccgtcga aggcgcgctc gccagcaagt tccgtaacag cggtcagacc
     1141 tgcgtctgca ccaaccgcgt ttacgctcaa tccgccattt acgacgaatt ttgccgcaaa
     1201 ttgagtgaaa aagcagccgc gctcaaattg ggcaacggct tggaggatgg tgtgaaccaa
     1261 gggccgctga ttgaggaaaa agcggtggag aaagtcgagc agcacatcgc cgacgcgctt
     1321 gctaaaggtg caagctgcct gaccggcggc aaacgcagcg cgttgggcgg aacgtttttc
     1381 gaaccgactg ttttaagcgg cgtaacggcg caaatggcgg tggcacgcga agaaaccttc
     1441 gggccgttgt gtccggtatt ccgttttgaa accgaagccg aggtcatcga ggctgcgaac
     1501 aatacggaat acggtttggc agcttacctt ttcaccgccg acaccgcccg ccaatggcgc
     1561 gtcggcgaag ccttggaata cggtatggtc ggcatcaata cgggcttaat cagcaatgaa
     1621 gcggcaccgt tcggcggcgt gaaacgtagc ggtttgggac gtgaaggcag caaatacggt
     1681 gcggacgaat atctagaatt gaaatatctg tgtatggatg tcgggtgacg gatgccgtct
     1741 gaacggcagg atttcagacg gcgccgcatt ttaagcagtc tctatctgtt gtacaatgcg
     1801 ccctgttttt acggttattt ttgatttgaa caagatatga tggaaaacgg aaaaacagtc
     1861 ccgagatggc gttttgcctt gaaaagtgcg ggctggcacc tcttaatcag cctgtcggtt
     1921 gcagggctgg cggcattgct ggtttttaag gtttggtatc cttatcctta tgccgagctg
     1981 acgggagggc tgtcgcttta tcagctggtg gtggctgtcg atattgtatg tggtccgctg
     2041 ctgactttaa ttttggcaag cccgaagaaa aagacaaagg cacgcatggt cgatttttcc
     2101 atggtcggca tcatccagct ggcggctttg gtgtacggtc tgcacagcgt ttcgctggcg
     2161 cgtcctgtgg tggaagcgtt tgaacaggat cgtatgacca ttgttacggc ggcggaagtc
     2221 gtggtcgaag atttgcacaa agcccccgaa gggctgcaaa gcctgtcgtg gttcggcatc
     2281 cgccgcattg cattgaaaga acctgaggat gcggatgaga agaacaagac gctggatttg
     2341 tccctgaaag gtatcgagcc gagtatgcgt cccgaccagt ggctgccgta ttccgacaag
     2401 gaagcagaag aaatccgcaa acatctgaaa ccgctgaaag tcttggcgga tgcgagaaaa
     2461 acgacggttg cggacattct gaaacaggca ggtctcgccg aaggggagga gctgtattac
     2521 ctgccgttta ccagcagcag gcagaaagag tggatagtca ttaccgataa agagggcaac
     2581 accaaaggct acgcgccgat agacggcttc atcatcaccc cttaagcgtt gggactccgt
     2641 ccgcactcga acatccgttc ttcgcggcgg tagaatcaga ctgtatttga gaggggcgca
     2701 acccctcaat cagggcaaca cataggggaa ggctttatgt gccgtccgtg tgttgaaaca
     2761 tttcaaaata agctcatgcc gtccgaacat cctttcagac ggtatggcat tttgccattg
     2821 ccccgataag ctgttaaact atttaaatta tttcgaccga aggtacacgc acatgcaaga
     2881 ccccgagcag agcagcaagc ccgcccgccg ttttttgtgc gtaccgtctg ttcaggcagc
     2941 ttgagcgctt caggctgcct tttcgcgttt gaacttgagg aatacgaaaa tcatggattt
     3001 cagttggttg gcagaaccgc atacctggat aggttttgcc acgcttttgg tgttggaagt
     3061 tgtattgggg atagacaatc ttgtctttgt ggcgattttg gcaaacaagg tccagcccgc
     3121 acggcgcgac cgcgcacgga ttatcgggct ggggctggca gtcgtcatcc gcatcattat
     3181 gcttgctttt atggcgcaca tcatcacgct gaccgagccg ctgttccaaa tcggcggcct
     3241 cgccgtttcc ggcaaggaca tgattatgct cgcgggcggt attttcctgc tttacaaagc
     3301 caccaccgaa ctgcatgaac gcctcgaagg gcacaaccgt tttaccgttg ccgacaacca
     3361 aaaaaaacac gcgccgtttt ggggcgtggt cgcgcaaatc ctgatactgg atgccgtgtt
     3421 ttccatcgat tcggtcatta ctgcggtggc gatggtcgat catatcgtcg tggcgatggg
     3481 tgcggtcgtc gtcgcgatgg ctgtaatgat ttctgccagc aaactcttga ccgaatttgt
     3541 cgacagacac cctaccgtcg tgatgctctg ccttggtttt ttgttgatga tcggtttcag
     3601 cctgattgcc gaagccttcc atttccacat tcccaaaggc tacctctacg ccgccatcgg
     3661 cttctcgatt ttaatcgaat tgtttaacca gatttcgcag cgcaacagcc gcaaaaacga
     3721 ctacatcggc agctcgtggc gcaagcgcac cgccgaaaac gtcttgggta tgatgggtat
     3781 acgcgaaagc gtgcttgccg acgcgggcgg cgaatccggg gacgacgcgc attttgaaga
     3841 aaacgaaaaa tcgatgatac gcagcgtgct gacgcttgcc gaacgcccga ttatgggggt
     3901 gatgatccca cgccgcgaca tcgaacggct ggacatttcc caaagccgcg aagaacagtg
     3961 tgcccaactg caaaacacgc cttacagccg cctgctcgtt gtcggtaagg cgggcgtgga
     4021 cgaacctttg ggctacatca acaaaaaaga cctgctgtcc caactgctgg aaacaggcgg
     4081 tctcgacatt cagacggcat tgcgccagcc actcgtcctg cccgacagca ccaccgcgct
     4141 gggcgcaatc gaactcttcc gccaaagcag cgcggattat gctttggtgg tggacgagtt
     4201 cggcgcggta ttgggcatgg taaccatgaa agacctgctc gaaaccatcg caggcgagtt
     4261 ccccgaagaa tttgagcgcg aagaagaacc agccgttcag gggaatcccg atgaaagcct
     4321 gacggtggaa ggcgcgttgg aatatgtgga actcgcaccg caactcaacc tgccgcagca
     4381 ggaggaagat gccgatttcc atacggttgc cgggctgatt atggaagaat tgcaaaccat
     4441 ccccgatgtc ggcgattttg ccgatttcca cggctggcgg tttgaagtgg tcgaaaaaga
     4501 agggcagcgc atcgagcggg tcaaaatcac caaattgccc gaagaataag cattcaggat
     4561 agaaaatgaa cgttttgatt tccaacgacg acggctacct ctccgaaggt attgccgttt
     4621 tggcgcgcgt tacggcggaa tttgccaacg tcagggtggt tgcgcccgaa cgcgacagga
     4681 gcggggtcag caattcgctg acgctggaac gccctttgca gttgaaacag gcgcaaaacg
     4741 ggttctacta tgtcaacggc acgccgaccg actgtatcca catcgggcag tctgtatttt
     4801 cggattttca ggccgatttt gtcttttcgg gcatcaaccg gggcgcgaat atgggggacg
     4861 acacgcttta ttcggggacg gttgcggcgg caaccgaagc ctaccttatg ggcatacccg
     4921 ctgtggcgtt ttccttaaac gacgcttccg gacgctattg ggcaaccgca gaaaaggcac
     4981 tgtggacatt gttggcgcat tttttcaaaa accccccgca gtcccctatt ttgtggaaca
     5041 tcaatatccc cgccgtcgag ccggaagatg tgcggggcat taaaatcgcc cgtttgggca
     5101 ggaggcatca cggtcagaac gtcatccccg cgcgcaatcc gcgcggcgaa cagatttatt
     5161 ggataggccc ggtaggcagg gtttccgaca aagaagaggg aacggatttc ggtgaatgcg
     5221 gcgcaggttt cattaccgta acgccgctgc aaatcgacct gaccgcctat ccggacatgg
     5281 cggaaacagc ggcgttctgg catgcggact gaccgtttca t
//
LOCUS       DAXHKG010000127         5297 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.127, whole genome shotgun sequence.
ACCESSION   DAXHKG010000127 DAXHKG010000000
VERSION     DAXHKG010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.127"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(1..241)
                     /locus_tag="ACFMWP_001737"
                     /pseudo
     CDS             complement(1..241)
                     /locus_tag="ACFMWP_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            complement(326..850)
                     /locus_tag="ACFMWP_001738"
     CDS             complement(326..850)
                     /locus_tag="ACFMWP_001738"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892298.1"
                     /translation="MEGIMLLKVVPERTVSADAKTRDPMWDNAALQTSEGVNFIARFL
                     GFFSDGEYRYVDVLQPNHSDIIRYSGKDFPINQIFNHIHPARYAVTFENNVDSKLRRH
                     WVAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAILCNKERLTSSEPLS
                     DFVLSVLKPYILRP"
     gene            complement(829..1182)
                     /locus_tag="ACFMWP_001739"
     CDS             complement(829..1182)
                     /locus_tag="ACFMWP_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892299.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            1418..2845
                     /locus_tag="ACFMWP_001740"
     CDS             1418..2845
                     /locus_tag="ACFMWP_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HFC5892300.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            2914..4317
                     /locus_tag="ACFMWP_001741"
     CDS             2914..4317
                     /locus_tag="ACFMWP_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HFC5892301.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(4481..5268)
                     /locus_tag="ACFMWP_001742"
     CDS             complement(join(4481..5013,5013..5268))
                     /locus_tag="ACFMWP_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611222.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC5892302.1"
                     /translation="MSQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKSDRQK
                     PAQYIGQHQDAYLHEIAKHFDCTAATICYALKQMGITRKKRPTTYKEQDPAKVTHYLT
                     QPAEFSDYQRVYLDETGFDRYLFRPYARSLKGQIVKAQISGKRYQRLSLVSAQVGNRL
                     IAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVL
                     PLAPYSPELNPIEKVWANIKQYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         1324 a         1285 c         1372 g         1316 t
ORIGIN      
        1 atgaacgccg aatcagatac accgcgccga agaggaacgc ctaacaggtt tcctttaccg
       61 tccgttatgt acgtttcgta acattcgaag acttcctgaa ccctgcctgc cgtttcggtt
      121 tctgtccccc cctgttagat aaggggggaa gatttgaagc ggttgccggc ttcctgccgt
      181 ccgctggcgc gtccgtcatc acgccggcaa ccgcctttgt catcccttgc ttatcttcca
      241 tggtgcgaat cctcaaaaac gggcaaaaaa aagccctgtt acttgtagaa agtaaaggac
      301 gttaattttt gttaatcgtc ccttcttagg gacgcaatat ataaggtttt aaaacgctaa
      361 gaacaaaatc cgataacggc tctgaagaag taagtctttc tttattgcac aagatagcaa
      421 acttccacgg cattctcgcc ccacccgtgc cgtccaagcc tttttcaaag acatagatgg
      481 ttttcttggc aatcacttcg tcagtttggc ggtcgataat ccgtatggtc gcacctgcca
      541 cccagtgcct gcgcagcttg gaatcgacat tgttttcgaa cgttaccgca taacgggcgg
      601 ggtgtatatg attaaatatt tgatttatcg gaaaatcttt acctgaatac cgaataatat
      661 cggaatggtt gggttgcagg acatccacat agcggtattc cccatcgcta aaaaatccta
      721 ggaaacgagc aataaaattt acgccttcgc tggtctgtaa agccgcattg tcccacatcg
      781 ggtctctggt ttttgcatct gccgaaacgg tacgctcagg tactaccttc aacagcataa
      841 tcccttccac attgtccgcc gtctggtaaa tctttccccc gccgttttgc attgttcgtt
      901 aaacacggct tcggcttctt tgtattttct gtcccactct tcttgtgcct gtatttcttc
      961 tttgatcggg ccgaattgtt tgggaataat ccaaacaaac agcatcagga tagcggcggc
     1021 ggtcaggctg cctgaaagga ttttgccggg gttccgtttg ggctttttat aggcaaagcg
     1081 gacgagaaac caaagcaaca gcagcatggt gccccaatag ccgattgaga ataggatggc
     1141 caaaccttct aggaaatggc gtaaatcgtt tgtggtaaac atgggttgtt cctgtggtta
     1201 aatgtgcagg ctgctttttg ccgaaccttg ccgcatctca aaagcagcct gcgcttcagc
     1261 gttgcgttac gcagtaaaat aatgaatatt tgtaacgact tgggtatttt ttgtcaatat
     1321 tcccgccttt cccttaacag ctgccgcgct ttccgttaaa attcctttac atatttatat
     1381 tgtttcctgt ttctatattg ccaaggttat acccgttatg tttttctccg ccctgaaatc
     1441 ctttctttct cgatacatta ctgtatggcg caatgtttgg gcggtgcgcg accagttgga
     1501 accgcccaaa cgcacggcgg aagaacaggc gtttttgccc gcgcatttgg aactgaccga
     1561 tacgccggtc tctgccgctc cgaaatgggc ggcgcgtttt attatggcgt ttgcgctttt
     1621 ggctttgttg tggtcctggt tcggcaaaat cgatattgtg gcggcggctt cgggcaaaac
     1681 ggtgtcgggc gggcgcagca aaaccatcca gccgctggaa acggcggtgg ttaaggcggt
     1741 acatgtgcgc gacgggcagc atgtgaaaca gggagaaacg ctggcggaac tggaggctgt
     1801 gggaacagac agcgatgtgg tgcagtcgga gcaggctttg caggctgccc aattgtccaa
     1861 actgcgttat gaagcggtat tggcggcatt ggaaagccgt accgtgccgc atatcgatat
     1921 ggcgcaagca cggtctttag gtctctccga tgccgatgtg caatcggcgc aggtgttggc
     1981 gcagcaccag tatcaggcat gggcggcgca ggatgcgcaa ttgcagtcgg ctttgcgcgg
     2041 ccatcaggcg gaattgcagt cggccaaggc gcaggagcag aagctggttt cggtgggggc
     2101 gatcgagcag cagaaaacag cagactaccg ccgtttgcgg gccgacaatt ttatttcgga
     2161 acatgcgttt ttggagcagc agagcaaatc ggtcagcaat tggaacgatt tggaaagtac
     2221 gcgcggtcag atgaggcaga ttcaggcggc cattgcacag gcggagcaga gtcgggtgct
     2281 gaatacgcag aacctgaaac gcgatacgct ggatgcgctg cgccaggcaa acgaacagat
     2341 tgaccaatac cgcggccaaa cggataaggc aaagcagcgg cagcagctga tgacaataca
     2401 gtcgcctgcg gacggcacgg tgcaggaatt ggccacctat acggtgggcg gtgtggtgca
     2461 ggctgcccaa aaaatgatgg tggttgcgcc cgatgacgac aaaatggacg tggaagtttt
     2521 ggtattgaac aaagacatcg gttttgtgga acagggacag gatgcggtgg tgaagattga
     2581 gagttttccc tatacgcgct acggttatct gacgggcaag gtgaaaagtg tcagccatga
     2641 tgcggtaagc cacgaacagt tgggcttggt ttatacggcg gtggtgtcgc tggacaaaca
     2701 taccttgaat attgacggca aagcagtgaa tctgacggcg ggcatgaatg tcacggcgga
     2761 gattaaaacg ggtaaacggc gggtgctgga ttatctgtta agcccgctgc aaaccaaatt
     2821 ggacgaaagc tttagggagc gataggcgga tccgtactgg gcatttgtta tccgccggtt
     2881 cggacatgca gactgcctga aaccattgcc cggatgacat tgctcaatct aatgataatg
     2941 caagattacg gtatttccgt ttgcctgaca ctgacgccct atttgcaaca tgaactattt
     3001 tcggctatga aatcctattt ttccaaatat atcctacccg tttcactttt taccttgcca
     3061 ctatcccttt ccccatccgt ttcggctttt acgctgcctg aagcatggcg ggcggcgcag
     3121 caacattcgg ctgattttca agcgtcccat taccagcgtg atgcagtgcg cgcacggcaa
     3181 caacaagcca aggccgcatt ccttccccat gtatccgcca atgccagcta ccagcgccag
     3241 ccgccatcga tttcttccac ccgcgaaaca cagggatgga gcgtgcaggt gggacaaacc
     3301 ttatttgacg ctgccaaatt tgcacaatac cgccaaagca ggttcgatac gcaggctgca
     3361 gaacagcgtt tcgatgcggc acgcgaagaa ttgctgttga aagttgccga aagttatttc
     3421 aacgttttac tcagccgaga caccgttgcc gcccatgcgg cggaaaaaga ggcttatgcc
     3481 cagcaggtaa ggcaggcgca ggctttattc aataaaggtg ctgccaccgc gctggatatt
     3541 cacgaagcca aagccggtta cgacaatgcc ctggcccaag aaatcgccgt attggctgag
     3601 aaacaaacct atgaaaacca gttgaacgac tacaccgacc tggatagcaa acaaatcgag
     3661 gccatagata ccgccaacct gttggcacgc tatctgccca agctggaacg ttacagtctg
     3721 gatgaatggc agcgcattgc cttatccaac aatcatgaat accggatgca gcagcttgcc
     3781 ctgcaaagca gcggacaggc gcttcgggca gcacagaaca gccgctatcc caccgtttct
     3841 gcccatgtcg gctatcagaa taacctctac acttcatctg cgcagaataa tgactaccac
     3901 tatcggggca aagggatgag cgtcggcgta cagttgaatt tgccgcttta taccggcgga
     3961 gaattgtcgg gcaaaatcca tgaagccgaa gcgcaatacg gggccgccga agcacagctg
     4021 accgcaaccg agcggcacat caaactcgcc gtacgccagg cttataccga aagcggtgcg
     4081 gcgcgttacc aaatcatggc gcaagaacgg gttttggaaa gcagccgttt gaaactgaaa
     4141 tcgaccgaaa ccggccaaca atacggcatc cgcaaccggc tggaagtaat acgggcgcgg
     4201 caggaagtcg cccaagcaga acagaaactg gctcaagcac ggtataaatt catgctggct
     4261 tatttgcgct tggtgaaaga gagcgggtta gggttggaaa cggtatttgc ggaataaagc
     4321 aggctgaaac ggttatgaaa ttcccaaagc agcctgcacc ccgtttcgaa agtgcaggct
     4381 gctttgggat tgatccgata ctttcacatt ctcattgcct ttaaataaag cacagttaaa
     4441 aacacattta aattaagtgc gaattaattc aaatgtatat tcaattaaaa tcaaaatagg
     4501 acagtagtgc atcgtcaaat cgggcgtaat cagacaaaac ggttcgcaga tactgcttaa
     4561 tattcgccca cactttctca atcgggttga gctcaggtga ataaggtgca agaggcaata
     4621 ccttatgtcc caatttttcc gccatttccc gtaagacacc catacggtga aatcgcgcat
     4681 tatctaaaat aatcaccgat ttttgagtca atgcgggcag taggcattgc tgaaaccacg
     4741 cttcaaaaaa gactccggtc atcgtatttt gataaaccat cggagcaatc agccggttgc
     4801 cgacttgtgc ggacaccaaa gataagcgtt ggtatctttt tccacttatc tgcgctttca
     4861 ctatttgccc tttcaggctg cgggcatagg gacggaacag gtagcggtca aatcctgttt
     4921 catccaaata aacacgttgg tagtcggaaa attcggccgg ctgtgtcaaa taatgcgtta
     4981 ctttggccgg gtcttgttct ttgtaagtgg tggtcttttt ttgcgcgtta tccccatctg
     5041 tttgagtgca tagcaaatgg tggctgccgt acaatcaaaa tgtttggcga tttcatgcag
     5101 ataggcatcc tggtgttgcc caatatattg agccggtttt tgcctatccg atttgacggc
     5161 atttagaccg gtaacttgat gttttaggct gcctgtttgt tttttaaggc gaatccacag
     5221 gtaaagcgtg tttcttgaca agttaaacgt tgctgcggtt tggctgatgt ttttgcattg
     5281 ttcgtaatat cgtggat
//
LOCUS       DAXHKG010000128         5222 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.128, whole genome shotgun sequence.
ACCESSION   DAXHKG010000128 DAXHKG010000000
VERSION     DAXHKG010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.128"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(69..485)
                     /gene="dksA"
                     /locus_tag="ACFMWP_001743"
     CDS             complement(69..485)
                     /gene="dksA"
                     /locus_tag="ACFMWP_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HFC5892303.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(632..1441)
                     /gene="proC"
                     /locus_tag="ACFMWP_001744"
     CDS             complement(632..1441)
                     /gene="proC"
                     /locus_tag="ACFMWP_001744"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HFC5892304.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRE
                     RLQKELGVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVDTL
                     SRYLGGTRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1472..1879)
                     /locus_tag="ACFMWP_001745"
     CDS             complement(1472..1879)
                     /locus_tag="ACFMWP_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HFC5892305.1"
                     /translation="MGMRTIKYLAMALLLMFTVAGCQLAGWYPCPSLSGWCMPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSECVRW"
     gene            complement(1861..2565)
                     /locus_tag="ACFMWP_001746"
     CDS             complement(1861..2565)
                     /locus_tag="ACFMWP_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFC5892306.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQVGRDPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTIC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAAKHGVAPEEAVVLAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSDDMPAAIACGATHVR
                     IGSAIFGKRSRLECVQ"
     gene            2685..3728
                     /gene="pilT"
                     /locus_tag="ACFMWP_001747"
     CDS             2685..3728
                     /gene="pilT"
                     /locus_tag="ACFMWP_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HFC5892307.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNIGRGPAAVFRTIPST
                     VLSLEDLKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3891..5117
                     /locus_tag="ACFMWP_001748"
     CDS             3891..5117
                     /locus_tag="ACFMWP_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC5892308.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1308 a         1611 c         1176 g         1127 t
ORIGIN      
        1 gactggtgcg cctttgtgaa tatactgtct gaaacttagg gcttcagacg gcattttgtt
       61 tgccgccatc agtcggcaaa ctgttttttc atcctctctc ggcgttcttg ggactcaaca
      121 gataaagtgg ctgtcgggcg tgccagcagc cgcttcagac cgataggctc tcccgtatcg
      181 gcacagaatc cataatcccc ttcatcaata ttgcggatgg tcgcctgtat tttactgaga
      241 agttttcgtt cccgatcgcg ggtacggagt tccaatgcgt actcttcttc ctgtgtggca
      301 cggtcggcag gatcgggggc tgattcgtgt tcttggagat gccctgtcgt agcggaagca
      361 ttttcgatga gttcgtcttg catttttacc agcaattcgc ggaaaaaagc caaatgctcg
      421 tcattcatat aatcgtcttc cggcccgttc caattcaaaa tatcttgttc tgtcagcttt
      481 gccataatgt atatcctctc ggttcaccga aaaaaacaaa gcaccacaaa gtggctttat
      541 tcctttgatt tttataaggc ttattgccta gggcgttttt gaaaacgcgc atcataacac
      601 gttttggatt ggttttttta ttttctttac attattgata ttgccgttcc atttcctgcg
      661 aacggcgcac acaggcacaa acgccctcgc ttatggcttc ggcgacacga tgccgcctga
      721 aagcttccac ggcttcgtgg gttgtcccgc cttttgacgt tacatttttt tgaagcttct
      781 cgaaatcttc acccgtctgc tcggcaaggg caaccgctcc tttaaacgtt gccagactga
      841 gcgcgcgtgc ttctgccata tcaaaccctt gtcggatggc agcattttgc aatgcgtcca
      901 gcagataaaa cacataagcc ggtccgctgc cgctgatacc ggtaatgctg tgcatttgcg
      961 cttcatcttc caaccaaacg gtcaaaccga ctgatttcat gattcgatcg gcaatcctgc
     1021 ggtctgtttc cgatacttcc gcttcggcaa acataccgga tacgcccagc ccgatttttc
     1081 cgggtgtatt cggcataacc cggacaatgc ggcgtgttcc cccgaggtaa cggctgagcg
     1141 tatcaaccga caatccagct gcaacagaaa gcaccaatgc gccgttggtg cggatatttt
     1201 tgcacgcggc ttccatatcc tgcggcttga cggcaaggat taaaacatcg tcggaatgaa
     1261 gctccggcaa ggtttcagaa gtttcgaccc ccaactcttt ttgcaaacgt tcgcgctttt
     1321 ccgcaccccg gttggcaata tggatgcggt aaccgccttg tttgaccaat ccgcccgcaa
     1381 cggcagccgc catattgccg ccgccgagaa aataaacatt cattatttct accctattca
     1441 aaattacctt actaaattca ttcccaattt tttaccatcg gacacactcg gacagaccgt
     1501 tgcgccgcaa cccctgcttt ttcaaacaat caaaaccttc ctgtttgaac gtctcaatca
     1561 aaggtttgcc gtcacgcgta cgccaatcca acccgcaggc ttcaaacttc cctattttcc
     1621 tgtaaaagta agattgttgt gcggattcat attcgtttgc cctaacggaa cgattgccgt
     1681 ctgaaagcgg tatctcgtag tcctctaaag acggcggact ctcgccgcca atatcccaaa
     1741 aatcgatggc agccggtttt ctcggcatac accagccgga caacgacgga catggatacc
     1801 aacccgccaa ctgacagccg gcaaccgtaa acataagcaa taacgccatt gcaagatatt
     1861 ttattgtacg cattccaatc tgctcctttt cccgaaaatc gcactgccga tacggacatg
     1921 tgttgcaccg cacgcaatgg cggcaggcat atcgtccgac atccccatag acagcacatc
     1981 cgccttaacg ccagccgtat tgaggtcggc aagcagtttc cgcatcgttt gaaattgcac
     2041 cttcaactcc gtttcactgc tgttggcttt ggcaacacac atcagtccgc gtacgacgat
     2101 attcggcaac ttcgccactt cgaccgcaag cacgaccgct tcttcgggcg cgacaccgtg
     2161 tttcgccgcc tcgcccgcaa tgttcacctc gatacacacc tgcaaaggcg gcattgagga
     2221 aggacgttgc ccgctcagcc ggacagcggt tttcagacgg catatggtat gcacccaatg
     2281 cgcgcgttcg gcgacaaact tggttttgtt ggactgcaca tcgccgatga cgtgccacac
     2341 gatgtcggtc aaatccgcca actcttccgt tttgccgtac cactcctgaa tatagttctc
     2401 gccgaaatca cgctgtccgg cggcgtaaac ttcgcggatg ccgtctgaag ggaaagtctt
     2461 accgacggca atcaggctga cggaatgcgg atccctgccc acctgcagaa ccaattttcc
     2521 gatacggtcg gacacctcac aataacgttc ttgcaacacc gtcatagatt atcccctaat
     2581 taaaaatgat taaacagttg aaacccctcc agtcagggcg gtacaatcaa ggttgttaga
     2641 accattccaa ccaatcgaaa cattatacta aacagagccg cattatgcag attaccgact
     2701 tactcgcctt cggcgccaaa aacaaagcat ccgaccttca cctgagttcg ggcatatccc
     2761 ctatgattcg ggttcacggc gatatgcggc gcatcaacct tcccgaaatg agcgcggaag
     2821 aggtcggtaa tatggtaact tcggtgatga acgaccacca gcggaaaatc taccagcaaa
     2881 acttggaagt cgacttctcg ttcgaactgc ccaacgtcgc ccgattccgc gtcaacgcct
     2941 tcaacatcgg ccgcggtccc gccgccgtat tccgcaccat tcccagcacc gtcttatcgc
     3001 tggaagattt gaaagccccg agcattttcc aaaaaatcgc agaatcgccg cgcggcatgg
     3061 ttttggttac cggccctacc ggttcgggca aatcgaccac gcttgccgca atgatcaact
     3121 acatcaacga aacccagccg gcacacatcc tgaccatcga agacccgatc gaattcgtcc
     3181 accaaagcaa aaaatccctg attaaccagc gcgagctgca ccagcacacc ctcagcttcg
     3241 ccaacgcgct gcgttccgca ttgcgcgaag accccgacgt tatccttgtc ggcgagatgc
     3301 gcgacccaga aaccatcggc ttggcgctga ccgccgccga aaccggacac ttggttttcg
     3361 gcacgctgca cacgaccggc gcagcaaaaa ccgtcgaccg tatcgtggac gtattcccgg
     3421 cgggggaaaa agaaatggtg cgctctatgc tgtccgaatc gctgaccgcc gtcatctccc
     3481 aaaacctgct gaaaacgcac gacggcaacg gccgtgtcgc ctcgcacgaa atcctgattg
     3541 ccaaccccgc cgtccgcaac ctcatccgcg aaaacaaaat cacgcagatt aactccgtcc
     3601 tgcaaaccgg gcaggcgagc ggtatgcaga caatggatca atcgctgcaa tcgctggtgc
     3661 gccaagggct gatcgcaccg gaagtcgcac gcagacgcgc gcaaaacagc gaaagtatga
     3721 gtttctgaca cacaaccgcc ttccggccat accggcggga aaacaaggcg caaacacgcg
     3781 gggcgggacg cagcatcccg cccggctacc cttccgaaca ggaagcgtcc gccttcctgt
     3841 tgaaacctgc cgccgcaaac tgcaaggctt aaaccgaaaa gaagctaacg atgaataccg
     3901 ataacctgca cgacatcttg gacgaaatgg ttcaagtgta ttctcaaaaa aaacaaagcc
     3961 gatccgaaac cccggccgaa atcggcgcac acttccaccc gctgctcgac cgcctgtgcg
     4021 aaaccgcaga agcacaaaac gcgtccgaca tccttatcag caaaggattc ccgccctcgt
     4081 tgaaaatcaa cagcgcatta accccgcagc cgcaaaaggc gctgacgggc gaggaaaccg
     4141 ccgccatcgc cgcatcgacg atgaacgccg aacaatcgga aatattccgg cgcgacggcg
     4201 aaatcaacta ctccgtccag tcgcgcagcg gcacgcgcta ccgcgccaac gcctaccaca
     4261 gccaaggcag cgcaggtttg gttttgcggc gcatcaacca cgtcatcccg caaatgcagg
     4321 aattgggcct gcccgaaaaa ctcaaagacc tcgccgtcgc accgcgcggg ctgctgatta
     4381 tcgtcgggcc taccggttcg ggcaaatcca ccacgatggc gactatgctc gaacaccgca
     4441 acaaaaccct gcccagccat atcgttacca tcgaagaccc gattgagttt atctacaaac
     4501 cgcgccgctg catctttacc cagcgcgaaa tcggcgtcga caccataaac tggcagacgg
     4561 cggtacaaaa cgctatgcgc cagtcccccg acgtggtctg catcggcgaa gtccgcagca
     4621 gggaaagtat ggaatacgcg atgcagctcg cccaaaccgg ccacctgtgc atttttacgc
     4681 tccacgccaa caccgcgccg cagtcgctcg aacgcatact caacttctac cccaaagaac
     4741 agcacaacca aatactgatc gacatcgccc tcaacctgac cggcatcatc tgccaacgcc
     4801 tcgccctcaa acaagacaaa acgggcagga cggcggttgt cgacttgctc atcaacacgc
     4861 ccgccatcca agacttcatc ctgaagggcg acctgatgaa catcagtaaa atcatggaaa
     4921 ccgccaaaac cgacggaatg cagacgatgg atcaaaacct tttcgaactg taccgtcacg
     4981 gcatcatcag ttacgaagaa gccctgcgcc agtccgtttc cgccaacaac ctgcgattgc
     5041 acatccaact gcacaaagaa ggcaaaacgc ccgaactcct ttacgacagg gtcaacggtc
     5101 tcaacctcat ttcctgatcc gcaaaaccca atgccgtctg aaaaccgcat ccccgttttc
     5161 agacggcatg attttatccg ccccattcat gtgctacact ttatagtgga ttaaatttat
     5221 ag
//
LOCUS       DAXHKG010000129         5198 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.129, whole genome shotgun sequence.
ACCESSION   DAXHKG010000129 DAXHKG010000000
VERSION     DAXHKG010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.129"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..480
                     /locus_tag="ACFMWP_001749"
     CDS             <1..480
                     /locus_tag="ACFMWP_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892309.1"
                     /translation="AAPKETINNLANLAKAEQQILFRIAQRDTQLDAWKTGFNNRVRK
                     GAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQMTGQNPNFRVL
                     PDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFIKGTKLELKFQ"
     gene            499..873
                     /locus_tag="ACFMWP_001750"
     CDS             499..873
                     /locus_tag="ACFMWP_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HFC5892310.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
     gene            1258..2688
                     /locus_tag="ACFMWP_001751"
                     /pseudo
     CDS             1258..2688
                     /locus_tag="ACFMWP_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
     gene            2707..2970
                     /locus_tag="ACFMWP_001752"
     CDS             2707..2970
                     /locus_tag="ACFMWP_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892311.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            3077..5198
                     /locus_tag="ACFMWP_001753"
                     /pseudo
     CDS             3077..5198
                     /locus_tag="ACFMWP_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
BASE COUNT         1607 a         1100 c         1261 g         1230 t
ORIGIN      
        1 gctgctccta aagaaacaat aaacaatttg gcaaatttag ccaaagcaga acagcagatt
       61 ttattccgta ttgcccaacg cgatacgcaa ctggatgcat ggaagacggg atttaacaat
      121 agagtaagga aaggagcagg cttgcttgat gcaagtaata ttccgataac cattaacgga
      181 aaaaccatca aacctgtaca agccataagc ttaaagggag cacccgttta cagcggcgta
      241 agcgaacagg agatttttgc gctttatcgg cagatgactg gccagaatcc gaattttaga
      301 gttttgcctg acggaagatt agcaaatggc attatcagta ctggagaatg ggcaggaaca
      361 aaaattgcat taagaaattt ttcaaaaaca gagaattcaa ctcaagcacg atggacatta
      421 gatttgcaga atcctccatc atttattaaa ggtactaaat tggagcttaa attccaataa
      481 tttacaaagg attttaccgt ggatgagaaa caaaaaatta agattcttga ttttcaaatc
      541 gatttatcct caatttttaa ctcttataaa aatcaaatgg gtattaatat tcaagataaa
      601 aacttaaaaa acaatttctg ttcttttatg gaagaactgt taaatgacgg ttcaatccgt
      661 ttacatgatt ataccgacgg tatcggaatt cctctaactg gaacttcaaa agaacaagtg
      721 cagaaattga aagacatatg gcctactttg gaagatgccc aagcaatatg gcctgaagac
      781 ccttggtatt acttagaatg gctttggtgg gatattgcgt gtccaataga tttggccgat
      841 ttgccgaata ttgatattta tgagcaagcg taggtatggt tagccgcctt tagcggcgta
      901 accgtacgca tatcagcaaa ctttataaaa taacaaggcc gtctgaaatc tgtttttcaa
      961 ctttttcaga cggccttgca acttggcatt tcattcgtac ggttacgccg ctaaaggcgg
     1021 ctaaccgtac ctacgagctc tgataaaaat gatttatgga agcaagctgt agcctgcatg
     1081 aaacctaaaa tccatgcgta aggtgtgtgc ttcagcgcgc acgcgttcca tgatttacgg
     1141 ctcaatgccg tctgaaaagc tcaatttttt cagacggcat ttgttatgca agtaaatatt
     1201 cagattccct atatactgcc cagatgcgtg cgtgctgaag acacccccta cgcttgctat
     1261 ttgaaacagc tccaagtcac caaagacgtc aactggaacc aggtacaact ggcgtacgac
     1321 aaatgggact ataaacagga aggcttaacc ggagccggag cagcgattat tgcgctggct
     1381 gttaccgtgg ttactgcggg cgcgggagcc ggagccgcac tgggcttaaa cggcgcggcc
     1441 gcagcggcaa ccgatgccgc attcgcctcg ctggccagcc aggcttccgt atcgctcatc
     1501 aacaataaag gcgatgtcgg taaaaccctg aaggagctgg gcagaagccg cacagtgaaa
     1561 aaactggttg tagcagcggc catcgcaggc gtatccaaca aaatcggtgc ttcctccctt
     1621 gccacttgga gcgaaacccc ttgggtaaac aacctcaacg tcaacttggc taatgcgggc
     1681 agtgccgcgc tgattaacac cgccgttaac ggcggcagtc tgaaagacaa tctggaagcg
     1741 aatatccttg cggctttggt gaatactgcg catggagagg cagcaagtaa aatcaaacaa
     1801 ttggatcagc actacattgc ccataagatt gcccatgcca tagcgggctg tgcggcagcg
     1861 gcggcgaata agggcaagtg tcaggacggc gcgattggtg cggtcgtggg ggagattgtc
     1921 ggggaggctt tggttaagaa taccgatttc agcggtatga ctgcttctga aattgaaaaa
     1981 gctaaagcga atattactgc gtatgcaaaa ttggtagccg gagcgactgt aggtgttaca
     2041 ggaggcaatg ttgatgtggc ggcaaatgct tccgaaacag ctgttaaaaa taatgcatta
     2101 gatattattt gggatatcgg caacctcgta tgggacggcg gtaaatggat ttacgccaaa
     2161 tctattggcg ataagcagat ggctcgagaa gcggcgattg attttggtgt ggatgccgcc
     2221 gcagctgccg ttccctttgt tccggcaggt gcgactaaaa tcagccgagg cggggcttat
     2281 gttctgaagg cgggagacga agcagttgat acggctaaag ccatacagga aattcagaag
     2341 cagaccggaa tcaagcttac ttatgataag gttaataagg tttggacaac accggcgggg
     2401 ttagattatg ggttagatgc taagcatggt aataggatta aacatgtttt agcccataca
     2461 attccaaatc caaacaaacc tgttcattct gtttttaatg tgtcccgtaa agaagttttg
     2521 cctttggttg atgaagcttg gagaatgaaa ggaaatcctt tgccaaatga ttcatccgta
     2581 tatcttgtag atatgaagaa acctattgga acaaaaggag aaacaaaagt gcggattgtt
     2641 gtgcaaaaag gaacaaataa aatcatttct gcatatcctc agaaataatt aagaaaggaa
     2701 tctcttatgg ataaagaaat taaaatttgc ccaagatgtg agcaaggcta cctttatcat
     2761 gcaaagccta aatatttctc tggggaggtc attttatgcg atgaatgtta tgctatgtgg
     2821 cttggggata tgaaaatttt ttacggacaa tatggaaaag atttttatga ttatcatgag
     2881 tttatgaaag ataaaggcat agaagaaata aatatgtggg aaggagagct ttttgatcac
     2941 ccatattatg aggatgaaaa atttaaataa ttgattttct gttccccgaa tttgggaaat
     3001 acgatgatat tttaaaccca aatattattt aaagtagcaa taggccgtct gaatatccgt
     3061 ttttcagacg gcctcaatgc aactgctggc agccgaaggc attcaccaac accaattgaa
     3121 tgttcagaaa agtacccgtt tcatcggcat caaagtgggt aaaagcaatt acagcaaaaa
     3181 cgagctgaac gaaaccaaac tgcccgtacg cgttatcgcc caaacagcca aaacccgttc
     3241 cggctgggat accgtactcg aaggcaccga attcaaaacc accctttccg gagccgacat
     3301 acaggcaggg gtgggtgaaa aagcccgagc cgatgcgaaa attatcctaa aaggcatcgt
     3361 taaccgcatc caaaccgaag aaaagctgga atccaactcg accgtatggc aaaagcaggc
     3421 cggaagcggc agcacggttg aaacgctgaa gctaccgagc tttgaagggc cggcactgcc
     3481 taagctgacc gctcccggcg gctatatcgc cgacatcccc aaaggcaacc tcaaaaccga
     3541 aatcgaaaag ctggccaaac agcccgagta tgcctatctg aaacagctcc aagtagcgaa
     3601 aaacatcaac tggaatcagg tgcagcttgc ttacgacaga tgggactaca aacaggaggg
     3661 cttaaccgaa gcaggtgcgg cgattatcgc actggccgtt accgtggtca cctcaggcgc
     3721 aggaaccgga gccgtattgg gattaaacgg tgcggccgcc gccgcaaccg atgcagcatt
     3781 cgcctctttg gccagccagg cttccgtatc gttcatcaac aacaaaggcg atgtcggcaa
     3841 aaccctgaaa gagctgggca gaagcagcac ggtgaaaaat ctggtggttg ccgccgctac
     3901 cgcaggcgta gccgacaaaa tcggcgcttc ggcactgaac aatgtcagcg ataagcagtg
     3961 gatcaacaac ctgaccgtca acctagccaa tgcgggcagt gccgcactga ttaataccgc
     4021 catcaacggc ggcagcctca aagacaactt gggcgatgcc gcactgggtg cgatagtcag
     4081 taccgtacac ggagaagtag cgagcaaaat caaatttaat ctcagcgaag actacattac
     4141 ccacaagatt gcccatgcca tagcgggctg tgcggcagcg gcggcgaata agggtaagtg
     4201 tcaggatggt gcgatcggtg cggctgtggg cgagatagtc ggggaggctt tgacaaacgg
     4261 caaaaatcct gccactttga cagctaaaga acgcgaacag attttggcat acagcaaact
     4321 ggttgccggt acggtaagcg gtgtggtcgg cggcgatgtg aatacagcgg cgaatgcggc
     4381 taaagtcgcg attgaaaata acctattatc tcaagaagag tatgctctta gagaaaaatt
     4441 gatcaaaaaa gccaaaggga aaggcctatt atctttagat tggggcagcc tgaccgaaca
     4501 agaggcaagg cagtttatct atttgattga gaaagatcga tattctaatc aattgcttga
     4561 ccgatatcaa aaaaatccaa gtagtttaaa taatcaagaa aaaaatattc ttgcatattt
     4621 tattaaccaa acctctggag gtaacacagc ttgggcagct tcgatactga aaacgcccca
     4681 gtcaatgggt aatctcacta ttccttccaa agatattaat aacaccttat cgaaagccta
     4741 tcaaacattg agtcgttatg attcttttga ttacaaatca gctgttgccg cacaacctgc
     4801 actttactta ttaaacggac cgcttggctt cagtgtcaaa gcagctactg tggcagcagg
     4861 aggatataac attggacagg gagcgaaagc aatctctaat ggagaatatc tgcatggtac
     4921 agttcaggtt gttaatggca cattgatggt tgcaggatct gtatctgcac aggctgcaat
     4981 atcggccaag cctgcacctg ttacccgtta tctgagcaat gacagtgctc ctgctttaag
     5041 acaagcttta actgctgaaa gccagagaat ccgcatgaaa ctgccggaag agtatcgaca
     5101 aatagggaat cttgcgatag caaaaattga tgttaaagga ttaccgcaaa ggatggaagc
     5161 atttagttct ttccaaaaag gggaacatgg atttattt
//
LOCUS       DAXHKG010000130         4857 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.130, whole genome shotgun sequence.
ACCESSION   DAXHKG010000130 DAXHKG010000000
VERSION     DAXHKG010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.130"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(210..932)
                     /gene="rmpM"
                     /locus_tag="ACFMWP_001754"
     CDS             complement(210..932)
                     /gene="rmpM"
                     /locus_tag="ACFMWP_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HFC5892312.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPVVVVEQAPQYVDETISLSAKTL
                     FGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVA
                     NNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPDRR
                     VDVKIRSIVTRQVVPAHNHHQH"
     gene            1296..2246
                     /locus_tag="ACFMWP_001755"
     CDS             1296..2246
                     /locus_tag="ACFMWP_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HFC5892313.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2359..3093)
                     /gene="fnr"
                     /locus_tag="ACFMWP_001756"
     CDS             complement(2359..3093)
                     /gene="fnr"
                     /locus_tag="ACFMWP_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HFC5892314.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTYFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3298..4719
                     /gene="hemN"
                     /locus_tag="ACFMWP_001757"
     CDS             3298..4719
                     /gene="hemN"
                     /locus_tag="ACFMWP_001757"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HFC5892315.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTASV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
BASE COUNT         1241 a         1330 c         1173 g         1113 t
ORIGIN      
        1 gcggcaatgg gacacaaacc tgaatctgaa tccgaacctg caccccgatt ctgacgatag
       61 ccgtttcaga aaaccaccca aaaaaacaaa ccccgcaaaa gcgggggttt gtttcacatc
      121 atcgatgccg accgacgttt cacgaatatt gcaacagtac ctggtacaaa atccactaac
      181 ctcatgcatc ggcaagatat tgcctagcct tagtgttggt gatgattgtg tgccggcaca
      241 acctgacggg ttacgatgct gcggattttc acatccacac ggcggtcagg ttcgatacat
      301 gcaatcagag cctcacgttt tttggcttta gagactttcg cacccagttt ggcaacttcg
      361 gcttcacaaa cttgagtcat ttgcgcttga gattcgccca agccgacagc agaaattcta
      421 gaaacaggta cgccgttgct gaccaggttg tttgccacta cgtatgcgcg gcgttcggac
      481 agggcctgat tgtatttgtc agaacccata aagtcggtat ggccttcgac gcggacagat
      541 tggatattgg tttgacccag gcgttgcgcc aatactttca ggttgtcttg agcttcggcg
      601 cgcaatgaat ccttatcgaa accgaacagg gttttggcag acagggaaat ggtttcatca
      661 acatattgcg gagcctgctc cacaacgacg acaggagcgg gttcgggttc tggctcgggt
      721 tcgggggcag caaccgcatc gccgcattct acgcgacctt ggcttgcttt atcaaagtag
      781 gcgtttttcc agcattcgcc atagttgttg cgtacgattt cgttcgactg gccgcttacg
      841 gtgtaaccct gaacggacgc ctcgcccgca acagcagtgc cggaagcgag caatgcaacg
      901 aataatgcgc ttaatttcag ctgtttggtc attttattcc ctcattaaat ttgtacagca
      961 gatacagaag caactgctga attgccaaca tacaggccgc tgtagaaaca tggcggcaaa
     1021 tcggatattt cagtctccac tataaagaag cagggggagg actgtcaata ctcaacgcct
     1081 gaaaacaacc gtaaaacagc ctgtttcctg atagtctatc atgccgaaaa atcaattccg
     1141 tgtcattact ttagggggat tttttccata tcgcacgatt gccgttgcac aaaaacaaca
     1201 aacacaacgg caaagcccca taccgtaccg gcaagaaaat atgataaatt ataaacaatg
     1261 ttcagccacc cgacacagac ccacaccgac ccgccatgaa attacaacaa ttgaaatacg
     1321 ccttagaagt ttaccagcac aacctgaacg tttccgaagc ggccgaagcc ttgtttactt
     1381 cgcaacccgg catctccaaa caaatcaaat tgctggaaga agaaatcggc attcagattt
     1441 ttatccgcag cggcaagcgc gtggtttcgg tctcgcagcc gggcaaggtg gttttggata
     1501 ttgcggaacg tattttacgc gatgtacaga acattaaaaa tatcggcagc gagtttaccg
     1561 gacaggacag cggttcgctg acggttgcca cgacgcatac tcaggcacgc tatgccctac
     1621 ccttgattgt tgccgatttt gtgaaacgct atccgaaagt caacctgacc atcaaacagg
     1681 ggagccctgc cgccatcgca cgtatggtta cctcaggcga ggcggacttg gcgattgtta
     1741 cggaacggat agacgaccat cccgaactgg gaaaacttcc ctgctatgac tggactcatg
     1801 cggttatcgt accgaacgac caccccttgc tcgaatgcag aaaccccctc cgcattgaag
     1861 atttggcgag gtttccgctg attacttatg aatttgcatt caatgcgggc agcagcatcg
     1921 cgcgggcatt ttccaaagcc cgtttggaac agccggatgt cgcattggcg gcggcggata
     1981 cggacgtatt gaagacttat gtgcgcttgg gtttgggcgt gggactgatg gcgaaaatgg
     2041 cgtacaaccc ggatacggac ggcgatttgc agcttgtgga tgcggcacac ctgttcgagc
     2101 cgtcgccgac gtggattgct ttgcgcagcg atacttattt gcgcggatat gcctacgact
     2161 ttatccaagc gtttgcgccg cacctgacac gcgagaaggt ggataggatt ctgtacacgc
     2221 ccatcagcga ggatttttcg atttaggcgg ctgccggttt tcagacggca ctttgcggca
     2281 gatacaacaa acaggacaga tgttttcgtc tgccctgtgt ttattgagaa tgccgtctga
     2341 aatgttcgta cgggttaatc aaatggcgtg cgaacaaccg gataccatct tcttcaacac
     2401 ctgcagattg aggatcttga tgtgtttgtg ttcgacggaa atcaatcctt cctgatgaaa
     2461 tttagataat gtgcggctga cggtttcaag tttcagcccg agataactgc cgatttcttc
     2521 gcgggacatt cttaagatga agtcgttggc agcaaaacct cgggaataaa ggcgttggga
     2581 aaggttcaac agaaaggcgg caatccgctc ttcggcgcgc atattgccca acagcagcat
     2641 aacaccttgg tcgcgcacga tttcacgact catcatgcgg aaaaagtagg tacgcaggct
     2701 ggggatattc tgccccagtt cttcgatgtg ggtaaacggc agttcgcaca cttcgctgtc
     2761 ttccaaggcg accgcgtcgc aactgtgcac atgggaacag atgccgtcca tgccgatgag
     2821 ttcgcccgac ataaagaaac ccgttacctg atcgcggccg tcctgactgg cgacggttgt
     2881 tttgaagaag cccgaacgga tggcaaagag cgaggtaaag gcttcgccga cacagaacag
     2941 gtattcgccc tttttcaggc ggcggctttg acggatgacg gcatcgagtt ggctgagctc
     3001 gttgggcagc agcccgacag gcaggcagag ttcccgcaaa gaacaggaag aacacagcgt
     3061 tttcatctga tgtgtagtat tatgcgaagc cataccgtac ctttttgtgc gctttgcccc
     3121 atcatgatta tagtggatta aatttaaacc agtacggcgt tgcctcgcct tgtccttatt
     3181 taaatttaat ccactatatg tgcttattga cacatatcaa gacaggttta tcatactgtg
     3241 gcattctacc aaactatcca aaatttgact aacatcataa aaccgcacac acacaccatg
     3301 aaaatcattc agatacagaa caatcacaat gtaaacgatg accgccccga gtttgaccgc
     3361 gcgctgattg ccagcctgcc cgccagcggc ccgcgctaca cttcctaccc taccgccgac
     3421 cgtttccatg acggtttccg cgaaggcgaa tatatcaaag ctttacattt gcgcggtatg
     3481 ggcgcgttaa acaaaccgct ttccctttac attcacattc cgttctgcaa caccatctgc
     3541 tactactgcg gctgcaacaa aatcatcacc aaagacaaaa gccgcgccga tgcctacatc
     3601 gaatatcttg aaaaagaaat ggaactgctc gctccacatc tgaacggacg gcaccagctt
     3661 gcccaactgc acttcggcgg cggcacgccg acctttttga gcgacgaaca gatcgaacgt
     3721 gtcttccgca tgatacgcaa acatttcgag ttaatcccca ccggcgaata ctccatcgaa
     3781 atcgacccgc gcaaagtcag ccgcgacacc gtcctcatgc tcggcagact cggcttcaac
     3841 cgcatgagca tcggcattca ggatttcgac cccaaagtgc aggcagcggt caaccgcatc
     3901 caaagttacg aagaaaccaa agaagtcatc gatgcggcgc gcgaagcggg gttcaaatcc
     3961 gtcagcgtcg atttgattta cggcctgccg caccagactt cggaaagcat caaaaccacc
     4021 atcgataccg ttttgtcgct cgatcccgac cgcctcgccc tttatcacta cgcccacctg
     4081 ccgcacgtgt tcaaaccgca acgccgcatc gataccgcct ccgtccccga cagcgaagag
     4141 aagctcgata tgctgcaata ctgcgtccaa accctaaccg aacgcggcta cgtcttcatc
     4201 ggcatggatc atttcgccaa acctgacgac gaactctcca tcgccctcaa agaaggcttc
     4261 ctccagcgca acttccaagg ctattcgacc tacgcggatt gcgatttggt cgccatcggc
     4321 gtgtcgtcca tcggcaaaat cggcagcacc tattcccaaa acgaacgcga catcgatgcc
     4381 tactatgccg ccatcgacga aggcagactg cccatcatgc gcggttatca gctcaatcag
     4441 gacgacatcc tgcgccgcaa tatcattcag gatttgatgt gccgcttcgc gctcgactac
     4501 cggatttacg aaagtatgtt cggcatcccg ttcgaccgct acttcaaaga cgaactggcg
     4561 gatttggaaa aactcgccgg tttgggattg gtgcgcctga acagccacgg gctgaccgtt
     4621 accccgaaag gacgcttcct catccgcaac atcgccatgg tgttcgacta ccacctgcgc
     4681 cacaaggaaa ccaaggcgaa atattcgcaa acggtgtgat tgcgtctaac gtacaaatgc
     4741 cgtctgaaag gctttttcag acggcatttt gctgccggca ggataagtgt tttcaagaac
     4801 aggcggcggc atatcataac gttccgcacc tttgtgtccg accgttccga aaccaag
//
LOCUS       DAXHKG010000131         4838 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.131, whole genome shotgun sequence.
ACCESSION   DAXHKG010000131 DAXHKG010000000
VERSION     DAXHKG010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4838
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.131"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            97..903
                     /locus_tag="ACFMWP_001758"
     CDS             97..903
                     /locus_tag="ACFMWP_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HFC5892316.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(961..2226)
                     /locus_tag="ACFMWP_001759"
     CDS             complement(961..2226)
                     /locus_tag="ACFMWP_001759"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HFC5892317.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLNPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEAIIKEFQTKGFITNE
                     AGYGKEITNAELLALEVDVLAPCALENQLTSENAGKVRATIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            2633..3343
                     /locus_tag="ACFMWP_001760"
     CDS             2633..3343
                     /locus_tag="ACFMWP_001760"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HFC5892318.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPKTE
                     AGLALLKSLGIPLAVVTNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            3416..3877
                     /gene="recX"
                     /locus_tag="ACFMWP_001761"
     CDS             3416..3877
                     /gene="recX"
                     /locus_tag="ACFMWP_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HFC5892319.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            3951..4112
                     /locus_tag="ACFMWP_001762"
     CDS             3951..4112
                     /locus_tag="ACFMWP_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892320.1"
                     /translation="MSEQPEKNHNPLLEDERKNPVYRMGQAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            4265..4747
                     /locus_tag="ACFMWP_001763"
     CDS             4265..4747
                     /locus_tag="ACFMWP_001763"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC5892321.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
BASE COUNT         1273 a         1417 c         1101 g         1047 t
ORIGIN      
        1 aaagacagtt ttcagacagc aaatccgtct tcacacgata cctattttgt tataacataa
       61 caaaatcttt gacccacacg agacaaaggc tgcaccatga agaaaacatt gacactgctc
      121 gccgtttccg ccctatttgc cacatccgcc cacgcccacc gcgtctgggt cgaaaccgcc
      181 cacacgcacg gcggcgaata ccttaaagcc gacttgggct acggcgaatt tcccgaactc
      241 gaacccatcg ccaaagaccg cctgcacatc ttcagcaaac cgatgcagct ggttaccgaa
      301 aaaggcaagg aaaacatgat tcaacgcggc acatacaact accagtaccg aagcaaccgt
      361 cccgttaagg acggcagtta cctcgtcatc gccgaatatc agcctacttt ctggtcaaaa
      421 aacaaagcag gctggaaaca ggcgggcatc aaagaaatgc ctgacgcaag ctattgcgaa
      481 caaacccgaa tgttcggcaa aaacatcgtc aacgtcggac acgaaagcgc ggacaccgcc
      541 atcatcacca aaccggtcgg acaaaacttg gaaatcgtcc cgctggacaa tcccgccaac
      601 attcacgtag gcgaacgctt caaagtccgc gttctgttcc gtggcgaacc gctgcccaat
      661 gccaccgtta ccgccacctt tgacggcttc gacaccagcg accgcagcaa aacgcacaaa
      721 accgaagcac aggctttctc cgacagcaca gacgacaaag gcgaagtgga catcatcccc
      781 ttgcgccaag gcttctggaa agccaatgtc gaacacaaag ccgacttccc cgatcaaagc
      841 gtgtgccaaa aacaggcgaa ctactcgact ttaaccttcc aaatcggcca ttcgcaccat
      901 taatcccgcc cgcacaaaaa tgccgtctga aggcttcaga cggcattttt tgttcaaaca
      961 tcaataccaa ccgcgcagtt tcatcgcttt ttcaacacgg cggatactca tcatgtaaga
     1021 cgcggttcgc aaatcgacat catactcttg cgccaagttc catatatcgc ggaacgcacg
     1081 gcgcaggacg acggtttctt tttcctgaac ttcgtcaaac tcccaataat agccttgcag
     1141 attttgtacc cattcaaaat aagataccac cacgccgccg cagttcgcca aaatatcggg
     1201 cacgaccaat acgccgtttt gacgcaggat aacgtcggct tcgggcgtag tcgggccgtt
     1261 cgcgccttcg accacgattg tcgcgcggac tttaccggca ttttcagaag tcagttggtt
     1321 ttccagtgcg caaggggcaa gtacgtccac ttccagagcc aaaagttcgg cgttggtaat
     1381 ttccttgccg tagccggctt cattggtgat gaaacctttg gtttggaatt ctttgatgat
     1441 tgcttccata tccaagccgt tttcgttgta aatggcaacg tcaacagtag aaaccgcaac
     1501 aactttcgcg ccggattgat gcgcgtaata acctgtgtgg taaccgacat taccgaagcc
     1561 ttggatggcg taagtggcac ccttcacgtc tttgcccagt ttttccaagg cttggacggc
     1621 ggcgaggttc acgccgtaac cggtagcctc ggtacgcgcc aaagagccgc cgaactcaac
     1681 cggtttaccg gtaaatacgc ccggtgcaga atgtttcacc acgttttcat aggcatcaac
     1741 catccaagac atgattttgc cgttggtgtt cacatcaggt gcgggaatat cgattttctc
     1801 gccgatcagc ggagaaatgg cttcggaata agcgcgggcg atgcgttcca gttccgcctc
     1861 ggaataatcg cgcggattca aggtaacgcc gcctttgccg ccgccgtaag gaatacccgc
     1921 aacgcagcat ttgatggtca tccaaatcga cagggctttg acttcgtcca gattcactcc
     1981 gggatggaag cgcacgccgc ctttataggg gccgacggcg ttgttgtgtt gcgaacggta
     2041 gcccgtgaag gttttgaccg tgccgtcgtc gagtttgacg gggaaattga cttccaacac
     2101 gcgggtcgga ctcttcagga tttcataaac ggccggatcg gttttcagcc ggtcgcaggc
     2161 ggttttgacc tgtttgcgcg cgatttcaaa cggattgagg gtttcttttg caagggcttc
     2221 agacattttg cttccttttc acaaaaagat tttcaggggc gtgcatttcg ctcattacta
     2281 taaccaattt cccgacaaaa tgtaatagcg tgtagtcggc ataagcccga tttgattaat
     2341 ctatatatga ttttattttt caagccgcac ggaatcagcc cggactccgc ctgaaaaagc
     2401 agcgcgcgcg tccgaaaaat aaatgtcaaa ttaaataaag atataggcat ccttttattt
     2461 tttaaaaatt taattggaac atcgctggga tttcaaaccc ttgcccgatt ccgccccgaa
     2521 atccgaaaac accgcctgca aaacctgttg cgattgttaa caatctatac attagaagcc
     2581 ctgtgcaaac gatgttaaaa taaacccttt caacccgaca ggaaatcaga ttatgaatgc
     2641 agccatcgaa cacgtccaag ccgtcgcctt cgatttggac ggcacactgt gcgattccgt
     2701 ccccgacctt gccgccgccg cagaagcgat gttggagcaa ctcggtatga aaccgctgcc
     2761 tgcaaaagtg gtcgaaagct atgtgggcga cggcatcggc aaactggttc accgcgtcct
     2821 caccaacgac cgcgaccgcg aagccgattc cgaactgtgg gaaaaaggtt tcgtatccta
     2881 tatgaaatac taccgcgacc atttgagcgt cttcacccgc ccctatccca aaaccgaagc
     2941 cgggctggca ttgctcaaat ctttaggcat cccgctcgcc gtcgttacca acaaaaacga
     3001 aatccttgcc gtcgaactgt tgaaacagct cggacttgcc gactacttca gcctgatact
     3061 cggcggcgac agcctgcccg agaaaaaacc cagccccctg ccgctgcggc atgccgccga
     3121 agttttgggt atcgatgttg caaacatggt tatggtcggc gactcgcgca acgacatcat
     3181 cgccgccaaa gccgccggct gcctgagcgt cggcgttacc ttcggttacg gcgatatgac
     3241 gctgctctcg caagacgatg cgacccgccc cgactggatt atcggctcgc tgcccgaaat
     3301 ttacgaaaac ctgcaaccgc agaaaaataa agacgaagaa taaaacaatc tgttcagacg
     3361 gcatcggaat ccgtttccca tgccgtctga atctttccgt gccgaaaccg ccgccatgaa
     3421 accgcaaaaa tccctacgcg cccgcgcgat ggacatcctc tcgcgccaag aagtcagccg
     3481 catcggtctg aaacgcaaac ttgcaccgca cgccgaaagc gaagaagagt tggaaaacgt
     3541 gttaaacgaa tttgccgaac gcaactggca gtcggatttg cgctatgccg aagcctatat
     3601 ccgcagcaaa agccgcaaac acggttcatt gaggctgaaa caggctttgg cgcaacaggg
     3661 catagatgaa gaaaccagcc gcaacctgct tcccgaccgc tcaagcgaaa aacaggccgc
     3721 catagacgtg ttgcgtaaaa aattcaaaca ccccgccgcc gaccttaaag aaaaacaaaa
     3781 acaggcgcgt ttcctcgcct atcgcggatt cgatgccgat accgttcaga cggcattgaa
     3841 acacgcttgg gacgaaaatt gggaagacgg ctgctgacct tccttcttga atctttttgc
     3901 acggcaacat aaccttacgc ccgtttccaa cttttccgat tgagaacaaa atgtccgaac
     3961 aacccgaaaa aaatcataac cccctccttg aggacgaacg caagaacccc gtgtaccgca
     4021 tggggcaggc agttgccgga ttcatgctcg tcgtttgggt cgccgtattg gcactcgtgt
     4081 ttttcctggt cttccgtttt tggctttcct aaacaaaatg ccgtctgaag gcttcagacg
     4141 gcatcggcgg tccatttcgg cagactatcc catcatagct ttttttagct tgaattccac
     4201 ttccccattc cctaaaattt ccccgcaccc atttcaaaac accctttctt aaaacaggta
     4261 caccatgaca caacaacgcc aactgccttc ccacgaactc attatgtccg aactgatgat
     4321 gccggacacc gccaatttca gcggcaacgt acacggcggc gaactcctgc tcctgctcga
     4381 ccaagtcgcc tattcctgcg ccagccgtta cagcggcaat tattgcgtta ccctgtcggt
     4441 tgacaaagtc ctgtttaaag aacccatcca catcggcgat ttggttacct tttacgccgc
     4501 tgtcaactac acgggacgca cctcgatgga aatcggcatc cgtgtcgaag cacaaaacat
     4561 ccgcaccggc gaaatccgcc acaccaacag ctgctacttc acgatggttg cggtcaaaga
     4621 cggcaaaccc gtccctgtcc ctccgctgga aatcctgacc gaccgccaac gctgccgcta
     4681 cgaaaaagcc aaaaaacgca gagacatcag cctgcaagcc tctgaagaca tgtcctgcgg
     4741 ctgctgacgg cggactatgc cgtctgaaag acaggcacat cgcgccatcc gtttccattg
     4801 caaacggatg aaatcaagca aatatagtgg attaaatt
//
LOCUS       DAXHKG010000132         4776 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.132, whole genome shotgun sequence.
ACCESSION   DAXHKG010000132 DAXHKG010000000
VERSION     DAXHKG010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4776
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.132"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            214..993
                     /gene="pgeF"
                     /locus_tag="ACFMWP_001764"
     CDS             214..993
                     /gene="pgeF"
                     /locus_tag="ACFMWP_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HFC5892322.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALDGTPDADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTTVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            1045..1524
                     /gene="lptE"
                     /locus_tag="ACFMWP_001765"
     CDS             1045..1524
                     /gene="lptE"
                     /locus_tag="ACFMWP_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HFC5892323.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1526..2524
                     /gene="holA"
                     /locus_tag="ACFMWP_001766"
     CDS             1526..2524
                     /gene="holA"
                     /locus_tag="ACFMWP_001766"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HFC5892324.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPSKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVLRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEEGDAWTVFKRLVVSLAE"
     gene            2645..3064
                     /locus_tag="ACFMWP_001767"
     CDS             2645..3064
                     /locus_tag="ACFMWP_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892325.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAIIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMVAKQSRGQKRPHR"
     gene            3140..3655
                     /locus_tag="ACFMWP_001768"
     CDS             3140..3655
                     /locus_tag="ACFMWP_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC5892326.1"
                     /translation="MMILKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3739..4623)
                     /locus_tag="ACFMWP_001769"
     CDS             complement(3739..4623)
                     /locus_tag="ACFMWP_001769"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HFC5892327.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDAENGSQSLELNRDLVGQLAEINKDLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGE
                     HLLQRLEAMEEIIDALSELFPTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
BASE COUNT         1065 a         1261 c         1337 g         1113 t
ORIGIN      
        1 gccgtactgg tttttgttaa tccactatat aaagctcgga gaaggtatat aagggcatca
       61 ttcccgcacc tgcaaaaatc cgaacccgaa cgtttgaaaa caatcccgaa tctccgaatt
      121 cccgcctgtg cgggaatgac gaaaaaacaa acatccattt gccccgaagg cagttaatca
      181 accctttccg ccacacacct attccaatat ccaatgaaaa ccatcacaga aaccctaaat
      241 cttgccccga aaggcaaaaa cttcctgacc gccgattggc ccgcgcccgc caatgtgaaa
      301 accctgatta ccacgcgcaa cggcggcgtg agccaaggtg cgtatcagag tttgaacctc
      361 ggtacgcacg tcggcgacaa tcccgaagcc gtgcgccgca accgcgaaat cgtgcaacag
      421 caggtcggat tgcccgttgc ctacctcaat caaatccaca gcaccattgt cgtcaatgct
      481 gccgaagcat tggacggcac gcccgatgcg gacgcttccg tggacgacac gggcaaggtt
      541 gcctgtgccg tgatgaccgc agactgcctg cctgttttgt tttgcgacag ggcgggtacg
      601 acggttgccg ccgcacacgc gggctggcgc ggtttggcgg gcggcgtatt gcaaaacacc
      661 attgcagcga tgaaggttcc gcctgtcgaa atgatggcgt atctcggccc cgccatcagt
      721 gcggatgcgt ttgaagtcgg acaggacgtg tttgatgcgt tctgcacgcc catgcccgaa
      781 gccgccgccg catttgaagg cataggcggc ggcaaattcc ttgccgacct ttacgcgctc
      841 gcccgcctga ttctgaagcg cgaaggcgtg ggcggcgtgt acggcggcac gcattgtacg
      901 gttttggaac gggatacttt cttttcctac cgccgcgacg gagcgacagg gcgtatggcg
      961 agcctgattt ggctggacgg caatgccgtc tgaacacgcc gctgatataa tctaccgact
     1021 ttgtgctttt gagaaaggca agccatgaac aaactgtttc ttactgccgc agtgctgatg
     1081 ctgggcgcgt gcggtttcca cctgaaaggt gcagacggca tttctccgcc gctgacctac
     1141 cggagctggc acatcgaagg cggacaggca ttgcagtttc ctttggaaac cgcgctgtat
     1201 caggcttcgg gcagggtgga cgatgctgcc ggcgcgcaga tgaccctgcg tatagacagc
     1261 gtttcccaaa acaaggaaac ctacaccgtt acccgtgcgg cagtcatcaa cgaatatctt
     1321 ttgatattga cggttgaagc gcaggtattg aaacgcggcg agccggtcgg caaaccgatg
     1381 accgtgtccg tccgccgcgt ccttgcttat gccgacaacg agatcttggg caaacaggaa
     1441 gaggaagcgg cattgtgggc ggaaatgcgg caggatgccg ccgaacagat tgtccgccgc
     1501 ctgacctttc tgaaggcgga atgacgtggc ggcacatatc ggacgcattg atacggacgc
     1561 gcctttgaaa cccctgtacg tcatccacgg cgaggaagaa ctgttgcgta tcgaggcatt
     1621 ggacgcattg agggcggcgg cgaagaaaca aggttacctt aatcgggaag tttatacggc
     1681 agacaatgct ttcgattgga acgagctgct gcaaaccgca ggcagtgcgg gtctgtttgc
     1741 cgatttgaag ctgttggaac tgcatatccc taacggcaag cccagcaaaa ccggcggcga
     1801 ggcgttgcag gattttgccg cccgcctgcc ggaagatacg gtaacgctgg ttttactgcc
     1861 caaactggag aaaacccagc tccagtccaa atggtttgcc gcattggcgg caaaggggga
     1921 agtgtgggaa gccaaaccgg tcggcgcggc ggctttgccc caatggatac gcggacggct
     1981 ggacaaaatc ggtttgggta tcggggcaga cgcattggca ctgtttgccg agcgcgtgga
     2041 aggcaatctg ttggcggcac gtcaggaaat cgacaagctc gcgctgctgt atccgaaagg
     2101 gcataccgtc aatatcgatg aggcgcaaac cgccgttgcc aacgtcgccc gcttcgacgc
     2161 gttccaactg gcaggcgcgt ggatgaaggg cgatgtcctg cgcgtatgca ggcttttgga
     2221 cggattgcgg gaagagggcg aagaaccggt gctgttgctg tgggcggttg ccgaagacgt
     2281 gcggacgctg atccggcttg ctgccgccct gaagcagggg cagagcatcc aatccgtccg
     2341 caacagcctt aggctttggg gcgacaagca gacgctcgca ccgcttgcag tcaagcggat
     2401 ttccgtcgtc cgcctgcttg acgcgctcaa aacctgtgcc caaatcgacc gaatcatcaa
     2461 aggcgcggaa gagggcgacg catggacggt attcaaacgg cttgtcgtgt cgctggcgga
     2521 ataaagcggt aatccccaaa atccgaaaat actgtaaaat accgttaatc ctgaaaagta
     2581 ttcaccaatc cgtccgaaaa catttcagac ggcacgacca cctcaataaa ggaacattaa
     2641 ccctatggac aataagacca aactgcgctt gggcggcctg attttactga ccaccgccgt
     2701 tttaagcctc attatcgtat tgattgtcga ttcctggccg cttgccatcc tgcttgccgc
     2761 catcatcgtc gccgccgctg cgggcggttt tgtttggaca tcccgccgac agcaacgcca
     2821 gtttatcgaa cgcctgaaaa aattcgacat cgatcccgaa aaaggcagaa tcaacgaggc
     2881 aaacctgcgc cgtatgtacc acagcggcgg acaacaccag aaagatgcga ttaccctgat
     2941 ctgcctgtcg caaaaatgtt cggtggacga ggcgcacgct atgttcaaaa aacgcccgac
     3001 acgtcaggaa atcaatcaaa tggtggcaaa acagtcgcgc ggtcagaaac gtccgcaccg
     3061 ttaaccgccg caaggcatct ttgcataaat gccgtctgaa gcctgttggc gtttcagacg
     3121 gcatattctg attgaaaaga tgatgatact gaaaaccgcc ccgctcaaac gccgctttgc
     3181 cgccatgctg tatgagatgc tgctggtcgg tgcggcaacc tgtttggcag cattgtttgc
     3241 cggtattgcc gccatttttc tgaatcccgt ttctatcgcg gtttctgcat tggtaacgag
     3301 tatcctgata atgggatcat ggtggcttta ttttcgcgcc aactggcacg gtcaggggca
     3361 gaccttggcg atgaggacat ggaaaatcgg cttgtgcgac cttaacggca tacagccgtc
     3421 tttgtacctg ttgcgcctgc gctttatttg ggcgtgcata ttcatcgtct tcattcctat
     3481 gcttgcttat gccggattgc gccacttcct cggcattccg cccaagggcg cggccggcgc
     3541 ggcattgatt tggctgattt taccgtgggg gttcgcactg ctgaatcccg accggcagtt
     3601 tctgtatgat tttcttgcag gaacaagatt ggtggcggtc aaaggaaagc cttaagcctt
     3661 tataccgcaa aggtttcaaa ctgaaaaaat gccgtctgaa agggctttca gacggcattt
     3721 gcttatcggg gaaaccgatt attcgatatt ctgcacttgt tcgcgcatct gttcgatcag
     3781 gactttcagc tcgaccgagg cttgggtgca ttcggtagcg atggatttgc tgcccaaagt
     3841 gttggcttcg cggtttaatt cctgcatcag gaagtccagc cgtttgccgc tgctgccttt
     3901 gtgttcggta acgatacggc gcacttcggc aatgtgggtg cgtaggcggc tgaactcttc
     3961 gtcgatgtcg gatttttgga taaagagggc aaattcctgt tgcaggcggt cgttgtcgat
     4021 gctgccgacc gcttcgacga ggcgggcgcg gattttttct ttatgtgttt ccaacagggt
     4081 aggaaagagt tcgcttaatg catctatgat ttcttccata gcctcaaggc gttgcagcag
     4141 gtgctcgcct aatttcttac cttcccgctt gcgtgcggca gtaaagtctt ttaacgcttt
     4201 ttcggtcagt tcggtaatgc tttttgccaa ttcttccgta ttttcccttt ggcttgccaa
     4261 tacgccgggg aaacgcagga tgtcggcaac gcccagtttt gccaaatcgt gatgcttgcg
     4321 gaggtctttg ttgatttcgg caagctgtcc gaccaagtcg cgattcagtt ccaaggactg
     4381 actgccgttt tccgcatctt gaatttggat tttgcattcg actttgccgc gtgcgatatg
     4441 ggatgaaatt ttctcgcgga taccgctttc caaatagcgc aaatcgtcgg gcatcctgat
     4501 ttgaatatct agaaaacggt ggttgaccgc acgcaggtcg agattgatgc gtttgctgcc
     4561 gcactctgcc gccgcgttgg caaatccggt catgctgtgg atgtggatat ttccgctgct
     4621 catgtcgttc tccgaagccc gttaaaatgg aatcaatata tcacatctgt atggcggcaa
     4681 gcgttttcgg gtgtgaaaaa ttgaagattt tgcagcggca gattggaatc acgcgctttt
     4741 gttgctgcaa ggaagggaaa tgtatagtgg attaac
//
LOCUS       DAXHKG010000133         4775 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.133, whole genome shotgun sequence.
ACCESSION   DAXHKG010000133 DAXHKG010000000
VERSION     DAXHKG010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.133"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..485)
                     /locus_tag="ACFMWP_001770"
     CDS             complement(<1..485)
                     /locus_tag="ACFMWP_001770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5892328.1"
                     /translation="MKIILTTSMSGLGGTETATVRLGRLLKRRGHDIILASSDGPFVG
                     EAQASGIRWQPVDFYRGGLAGYLKSTFAYARMLRREQPDIIDCQMARVVPACALAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPAGRIAYAY
                     NA"
     gene            complement(482..1903)
                     /locus_tag="ACFMWP_001771"
     CDS             complement(482..1903)
                     /locus_tag="ACFMWP_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HFC5892329.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRHAPFSPAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEENAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACATSFW
                     LFFVFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAVYLAG
                     CILRHWKDLHKLFHYLKKQGFPL"
     gene            complement(2098..3207)
                     /gene="ribD"
                     /locus_tag="ACFMWP_001772"
     CDS             complement(2098..3207)
                     /gene="ribD"
                     /locus_tag="ACFMWP_001772"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HFC5892330.1"
                     /translation="MFSDTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETAGGK
                     IDLNHLMRLLADEGFGEIMVEAGSELTSAFLAEDLADEIVLYRSPKILGSGKDLLSLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNDNAF"
     gene            complement(3240..3704)
                     /locus_tag="ACFMWP_001773"
     CDS             complement(3240..3704)
                     /locus_tag="ACFMWP_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HFC5892331.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPSCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTKHRLYTSGQRD
                     IPSAALADMVLKELLEHNTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            complement(3733..4575)
                     /locus_tag="ACFMWP_001774"
     CDS             complement(3733..4575)
                     /locus_tag="ACFMWP_001774"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HFC5892332.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVIAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
BASE COUNT          976 a         1225 c         1617 g          957 t
ORIGIN      
        1 gcgttgtagg cgtaggcaat ccggccggcg gggaagccgt ggcggatgag tttttcgcgc
       61 tcgtgtttac agttgccgat gatgtacacg cccagcttgt cgaagagctt ggcgattttg
      121 gggtaggttg ccgcgtccaa accgtgcgag tggtagatga ttttggtttt cggcgaaacg
      181 attttggcgg caagggcgca ggctggaaca acgcgcgcca tttggcagtc gatgatgtcg
      241 ggttgttcgc ggcgcagcat ccgggcgtag gcaaaggtgc ttttgaggta gccggcaagc
      301 ccgccccggt aaaaatcaac cggctgccaa cggatgcccg atgcttgcgc ctctccgaca
      361 aaaggcccgt ccgaagaagc aaggatgatg tcgtgcccgc gccgtttgag cagccgcccg
      421 aggcggacgg tggcggtttc cgtgccgccc aagcccgaca tagaagtggt caggatgatt
      481 ttcataatgg aaacccttgt tttttcaaat aatgaaacag tttgtgcaaa tctttccagt
      541 ggcgcaggat gcagcctgcc agatataccg cccatacgcc ggcaaacagg gggtagtttg
      601 ccggtgtgcc gaagcaggtg taggccgccg aggaggtcag gcagagcaat gtgtgcgtat
      661 aaagcggcag gcgtttgagc ggctgccaca ggcgacagga gctttctgtc ttgaaaacaa
      721 aaaacaacca gaatgaggtg gcacaggcaa ccgccgcgcc gcgcgcgccg ccggacggta
      781 cggcaagccc cagcagcagc aggtttgccg ccagcgcgcc caaggtggcg agcgcgatcg
      841 ggcgtgtttt tcggacgacg ttcaaaccga tgccgctgat ttctaccagc gtgcaaaaca
      901 gcggcggcag catacacgat acgacgataa accggacggc agcgtagttt tccggcagca
      961 ggagggaggc gaggggcgag aaaatgccgg tcaggcagag ggcggaggca agcagggcgg
     1021 cggcggattc tgccgttgcc gagaggcggg cgggcggggc gttttcttcg attgcgcgga
     1081 aaatatacgg tgtccagacc gttgaaaaga tgctttggaa caataatgcc gccccgccga
     1141 acgaaatacc catcgaataa acgccgagct gttccagacc ggcatatttt ttcaggaaca
     1201 aacggtcggc ggatgccagc ccccaatagg cgatgctgct cagtgcgatc ggtatgccgt
     1261 agcgcagccc ccggtgcagg acggcgggcg aaaacggtgc gtgccggacg gccttcagac
     1321 ggcatcggtt ttgaaacagc aaaaaggcgg cggcggcaag gtttgccagc gcgtaaacgg
     1381 cggtcaggac ggcggtgttc gccggaaagt gcagcagccc gaccgtcagc ggcagcagca
     1441 gcaggatggc gagcttgggc acgagttgcg cggacgaaaa ggcaagggcg cgcccttcca
     1501 tacgcaaaac cagtaagaga aagcggatgg gcaggaagct cagttcaaac agcaccagcc
     1561 cgatgccggc ggcggcatcg tcgagcgaaa acaggatttc agacggcagg gacgggcggg
     1621 aaagcagcag ggcggctatc gcggcggcag acagcagcgg cggcaggaac agggttttga
     1681 acaaggtgtc tttgtcggcg gcggcatagt attcgcggac gtatgcctga tccagcccga
     1741 ggcacaatac cgacaccgtc agtcccgccg ccgtctgcat cagcacgatg cgcccgatgt
     1801 cgtcggcggg gaaataccac gacagcagcg gcaggatgat gacggctaaa accgcgctgc
     1861 cgatcgagcc tgccgcgtag ccgaggattt cttttgtgtc catttttgat gtccgggcgg
     1921 cggcgggatg ctgcctgtgc cgtctgaagc ctttcttgat cggaatttga cggctttcag
     1981 tccgttgcgg ctgccggcgg ggtgcggcag tccgggttgc gcttttccgg gcgggcggcg
     2041 gtctgaacgg ggccgttttt tatcggcgtt attatatagt gaaacggcgc aaacccttta
     2101 aaaggcgtta tcgtttttcc ggaacacggt tttgatgtcg tgtccgagga tttcgcttga
     2161 aacgggtgtc cacaagggcg gtgcggaaag ggcggcgcgg ttttcgggca gggaaagcag
     2221 gtctttgccg ctgccgagga ttttgggcga acggtacagc acgatttcgt ccgccagatc
     2281 ttctgccaga aatgcggatg tgagttcgga gcctgcttcg accatgattt ctccgaaacc
     2341 ttcgtcggca aggaggcgca tcaggtggtt caggtcgatt ttgccgcctg ccgtttcaga
     2401 cggcatcagg atgcggatgt gtgcgtgttc ccgatagggg cggagtttat cttcatcgcg
     2461 ttccaaggtg gcgatgtagg ttggagattg tccgtcggtc agaaggtggc tgtccaaggg
     2521 caggcgcagg cggctgtcta acacgatgcg tgcgggttgg cgcaaagttg gaaaagcgcg
     2581 gacgttgagc cggggattgt ccgccaacac cgtgccgatg ccggtcagca ccgcgcagct
     2641 ttcggcacgc aaaacctgta cgtcggcacg cgcgtcttcg ccggtaatcc aaaagctgct
     2701 gccgtctgaa agggcggttt tgccgtccag cgaaacggcg catttgaggc ggacgaaggg
     2761 gcggcggcgt tcgatgcgcg acaggaagcc tcggttgagt tcccttgcct gatgttcgag
     2821 taaaccgcat tccgtcttga tgcctgctgc ttcgagcagg gcaagccctt tgcctgcaac
     2881 cagcgggttg gggtcgcgca tggcggcgac gacgcgtgtt acaccggaac ggagcagagc
     2941 ttcggcgcag ggcggtgtgc gtccgtaatg gctgcacggt tcgagggtaa caaaggcggt
     3001 cgcgccttgt gccatttcgc ccgcctgacg cagggcgtgg acttcggcgt gcggttcgcc
     3061 cgctttgacg tggaagcctt gcccgacaat ttggctgccg tgtgcgataa cgcagccgac
     3121 gcgcggattg ggcgaagtgg aaaaacgtcc caaagcggca agtcggaggg cggtttccat
     3181 catggatata tctgtgtccg aaaacatagg gataccgtat cagtatgggt tggggagaat
     3241 caggctttgc ggtctgtttt gacggcttgc gccagccacg aggcaaagtc tgccggattg
     3301 tcgaagcgtt tgtgcagggc ggcgaaacgg acggcggctt ccgtgttgtg ctcaagcagc
     3361 tcttttagca ccatgtcggc aagtgcggca gaggggatgt cgcgctgacc cgaagtgtag
     3421 agcctgtgtt tcgtcaggcg gacggtttcg tcgatctgtt cgggtgtcag ggcggatttt
     3481 cgggcggcgg cggtcaggtc gttgcggagg cgttgtgcat taaagggcga acgttttttg
     3541 tccggaccga tgacggcggg cattttgagt tcggcggttt cgagcgtgcc gaagcgtttg
     3601 ccgcagctgg ggcagtggcg gcggcggcgc acggcgttgc gttcttccat caggcgcgaa
     3661 tcggcgacgc gggtgtcggg gtgggcgcaa aacgggcatt tcatagcgtt tcttcctgat
     3721 gccgtctgaa cgtcaaaccg atacgccggc ggcgcgggcg atttccagac cttcttcggc
     3781 actcatatag acggggtttt cgggacggtc gtgtcggacg atgttgcctt cgcggaacat
     3841 gaccagttcg tccacggcaa gttgggacca tgattcgtcg cgggtcagtg gcagggtggc
     3901 gataacggcg acgcggtcgg agggcgtggt tacttcggca aaatcgacca tcacgtcgtc
     3961 gtcgagcagg cgcgccttgc cgaacggggc ttggcggacg atgtagtgca gcagtgtgct
     4021 ggcgtgggca aacagggcaa tgccgtctga aagcataaag ttaaacagcc cgaacttgcg
     4081 gatttcgtgc gtcagccccg caatcgcgtc aaacagcgtg tcgtcgtcgg gacgggcggc
     4141 aaagcgggtg cgcaggcggt tgaggatgtg gcagaacgcg cgttcggaat cggttgtgcc
     4201 gacggggtgg aaaaattcgc cctgttcggg gaaaaaatca atcaaatgtc cgttgtgggc
     4261 aaacagccag tagccgcccc acatttcgcg cataaaggga tgggtgttcg ccagcgaggt
     4321 ttgtccttgc gatgctttgc ggatatgtgc gatgacgttt tccgatttga tttggtaggc
     4381 acgcacgagg tcggcgacgg gggaatttgc gctcggcttg tcgtcgtgga acaggcgcac
     4441 gcctttgcct tcgaaaaagc cgatgccgaa accgtcggca tgatggtcgg taatgccgcc
     4501 gcgccggcgg aagccttcaa aggaaaacat aatatcggtc ggcgtattgc agttcatgcc
     4561 cagcagttga cacatagttt gtccaaatga ttcagatggt cgcaagtatt cggattatac
     4621 cccgaactga aaatgccgtc tgaaatacgg cttgttcccc attattccca cgaaaacaga
     4681 aaacaaagac ggaaacttaa gattccgtca ttcccgcgca ggcgggaatc tggaatttca
     4741 atgcctcaag aatttatcga aaaaaaccaa aaccc
//
LOCUS       DAXHKG010000134         4724 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.134, whole genome shotgun sequence.
ACCESSION   DAXHKG010000134 DAXHKG010000000
VERSION     DAXHKG010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.134"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            297..995
                     /locus_tag="ACFMWP_001775"
     CDS             297..995
                     /locus_tag="ACFMWP_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC5892333.1"
                     /translation="MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(1052..2056)
                     /gene="amgK"
                     /locus_tag="ACFMWP_001776"
     CDS             complement(1052..2056)
                     /gene="amgK"
                     /locus_tag="ACFMWP_001776"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HFC5892334.1"
                     /translation="MQRQTELKNWLQTIYPERDFDLSFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            2126..4534
                     /locus_tag="ACFMWP_001777"
     CDS             2126..4534
                     /locus_tag="ACFMWP_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HFC5892335.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEHGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPIFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPSVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEMLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
BASE COUNT         1141 a         1439 c         1243 g          901 t
ORIGIN      
        1 ttgaaagggg tgtaaccctt ccgaaccagg gcaacgcata gggcggtgct ttatgtgccg
       61 tcctgtgtgt tggaacatca ttagttcccc aacagccgta tccgtctggg gcgacggcgc
      121 gtattgtacg acagaaaccg cttcagacgg catcgggttt gatgccgtcc gaagcggttt
      181 ccccaaacga aaacgtcctt ttccggaggc aaactgtatc aacacgcgga aatgcaataa
      241 aatagccgga ttccgattga tttccaacat ctgtttccaa catcacggag agccgtatga
      301 aatccaaaca cctcgccctc ggcgttgccg ccctgttcgc acttgccgcg tgcgacagca
      361 aagtccaaac cagcgtcccc gccgacagcg cgcctgccgc ttcggcagcc gccgccccgg
      421 cagggctggt cgaagggcaa aactatactg tccttgccaa cccgattccc caacagcagg
      481 caggcaaagt cgaagtcctt gagtttttcg gctatttctg tccgcactgc gcccacctcg
      541 aacctgtttt aagcaaacac gccaagtctt ttaaagacga tatgtacctg cgtaccgaac
      601 acgtcgtctg gcagaaagaa atgctgacgc tcgcacgcct cgccgccgcc gtcgatatgg
      661 ctgccgccga cagcaaagat gtggcgaaca gccatatttt cgatgcgatg gtcaaccaaa
      721 aaatcaagct gcaagagccg gaagtcctca aaaaatggct gggcgaacaa accgcctttg
      781 acggcaaaaa agtccttgcc gcttacgaat ctcccgaaag ccaggcgcgc gccgacaaaa
      841 tgcaggagct gaccgaaacc tttcaaatcg acggtacgcc cacggttatc gtcggcggca
      901 aatataaagt cgaatttgcc gactgggagt ccggtatgaa caccatcgac cttttggcgg
      961 acaaagtacg cgaagaacaa aaagccgcgc agtaagcccg tttgaaaaat gccgtctgaa
     1021 acttggtttt cagacggcat tttgattggg tttaaaacgt aaagcccgtt tccagttctt
     1081 catcgccgac cagttcgacc aagagcgcgt agagcggggc gagttcggca taacggcgcg
     1141 atacgcggcg caggtaattg aggaaacgcg ggatttcggg acggtatttg tctttgccgt
     1201 cacggtagta caggcgtgcg aagatgcctg caaccttcaa gtgccgctgc acgcccatcc
     1261 attcgaacca gcggtaaaac tcgtcaaacg cttcggggac gggcaagccg gcagcccgcg
     1321 ccttttccca gtagcggata accaagtcca agacaaattc ttcttcccat tcgataaagg
     1381 catcgcgcaa cagcgacacc aaatcgtagg aaatcgggcc gtaaagcgcg tcttggaagt
     1441 ctaaaacgcc cggtctgccg cgcgtcagca tcaggttgcg gacgataaag tcgcggtgca
     1501 catagacttt gggctgcgcc aacaggggcg gcagcagcgt atcgacggtt tgctgccaaa
     1561 gttggcgttg tttgaatgtt aattcgcgcc ccaattcttt tgcgacaaac cattccggga
     1621 acaggttgat ttcgcgcagc atcgtttcac ggtcatattc gggcaaaacc ccttcacggc
     1681 ttgccttctg caattcgacc agctcgccga ttgcctccaa aagcagggct ttgtgcgccg
     1741 cttcgccctg ctcctgaagc atcgcggtca aaaacgtcgt attgcccaag tcgttcaata
     1801 ccacaaaccc caaatccgtg tccgcgtgca atacctgcgg tacattgacc atgtcaaaca
     1861 gtttctgcac tttcaaataa ggtgcgacac tcatcttgtc gggcggtgca tccatgcaga
     1921 cgacactgct gccgtctgaa aacgttgcac ggaaatagcg gcggaaatca gcatccgccg
     1981 ccgcgaagga cagatcgaag tcccgttcgg gatagatggt ctgaagccaa tttttcagtt
     2041 cggtttgccg ttgcataaca gtactaaagc atttcaggtt acaataaacg ctattctaac
     2101 tggcaaaccg acttgagggg cgattttggc tcgtttattt tcactcaaac cactggtgct
     2161 ggcattgggc ttctgtttcg gcacgcattg cgccgccgcc gatgccgttg cggcggagga
     2221 aacggacaat ccgaccgccg gaggaagcgt tcggagcgtg tccgaaccca tacagcctac
     2281 cagcctgagc ctcggttcga cctgcctgtt ttgcagtaac gaaagcggca gccccgagag
     2341 aaccgaagcc gccgtccgag gcagcggcga agcatccatc cccgaagact atacgcgcat
     2401 tgttgccgac aaggtggaag gacagtcgca ggtgcaggtg cgtgccgaag gcaacgtcgt
     2461 cgtcgaacgc aaccggacga ccctcaatac cgattgggcg gattacgacc agtcgggcga
     2521 caccgttacc gcaggcgacc ggttcgccct ccaacaggac ggtacgctga ttcggggcga
     2581 aaccctgacc tacaatctcg agcagcagac cggggaagcg cacaacgtcc gtatggaaac
     2641 cgaacacggc ggacggcggc tgcaaagcgt cagccgcacc gccgaaatgt tgggcgaagg
     2701 gcattacaaa ctgacggaaa cccaattcaa cacctgttcc gccggcgatg ccggctggta
     2761 tgtcaaggcc gcttccgtcg aagccgatcg ggaaaaaggc ataggcgttg ccaaacacgc
     2821 cgccttcgtg ttcggcggcg ttcccatttt ctacacccct tgggcggact tcccgcttga
     2881 cggcaaccgc aaaagcggcc tgcttgttcc ctcactgtcc gccggttcgg acggcgtttc
     2941 cctttccgtt ccctattatt tcaaccttgc ccccaatctc gatgccacgt tcgcgcccag
     3001 cgtgatcggc gaacgcggcg cggtctttga cgggcaggta cgctacctgc ggccggatta
     3061 tgccggccag tccgacctga cctggctgcc gcacgacaag aaaagcggca ggaataaccg
     3121 ctatcaggcg aaatggcagc atcggcacga catttccgac acgcttcagg cgggtgtcga
     3181 tttcaaccaa gtctccgaca gcggctacta ccgcgacttt tacggcaaca aagaaatcgc
     3241 cggcaacgtc aacctcaacc gccgtgtatg gctggattat ggcggcaggg cggcgggcgg
     3301 cagcctgaat gccggccttt cggttctgaa ataccagacg ctggcaaacc aaagcggcta
     3361 taaagacaaa ccgtatgccc tgatgccgcg cctttccgcc gattggcgca aaaacaccgg
     3421 cagggcgcaa atcggcgtgt ccgcacaatt tacccgcttc agccacgaca gccgccaaga
     3481 cggcagccgc ctcgtcgtct atcccgacat caaatgggat ttcagcaaca gctggggtta
     3541 cgtccgtccc aaactcggac tgcacgccac ctattacagc ctcaaccgct tcggcagcca
     3601 agaagcccga cgcgtcagcc gcactctgcc cattgtcaac atcgacagcg gcgcaacttt
     3661 tgagcggaat acgcggatgt tcggcggcgg agtcctgcaa accctcgagc cgcgcctgtt
     3721 ctacaactat attcctgcca aatcccaaaa cgacctgccc aatttcgatt cgtcggaaag
     3781 cagcttcggc tacgggcagc tctttcgcga aaacctctat tacggcaacg acaggattaa
     3841 caccgcaaac agcctttccg ccgccgtgca aagccgtatt ttggacggcg cgacggggga
     3901 agagcgtttc cgcgccggca tcggtcagaa attctatttc aaggatgatg cggtgatgct
     3961 tgacggcagc gtcggcaaaa aaccgcgcaa ccgttccgac tgggtggcat ttgcctccgg
     4021 cagcatcggc agccgcttca tcctcgacag cagcatccac tacaaccaaa acgacaaacg
     4081 cgccgagaac tacgccgtcg gtgcaagcta ccgtcccgca cagggcaaag tgctgaacgc
     4141 ccgctacaaa tacgggcgca acgaaaaaat ctacctgaag tccgacggtt cctattttta
     4201 cgacaaactc agccagctcg acctgtccgc acaatggccg ctgacgcgca acctgtcggc
     4261 cgtcgtccgt tacaactacg gttttgaagc caaaaaaccg atagaaatgc tggcgggtgc
     4321 ggaatacaaa agcagttgcg gctgctgggg cgcgggcgtg tacgcccaac gctacgttac
     4381 cggcgaaaac acctacaaaa acgctgtctt tttctcactt cagttgaaag acctcagcag
     4441 tgtcggcaga aaccccgcag acaggatgga tgtcgccgtt cccggctata tccccgccca
     4501 ctctctttcc gccggacgca acaaacggcc ctgaccgtcg gaaacccggc aggagcaccg
     4561 ttcccgcaca agacggcatt ccaccgacaa ccccaaaccc gccatcaaag gcaggattca
     4621 aacgataagg aaagaatgat gaaaatcaaa gccctgatga ttgccgccgc attgctggca
     4681 gcagccgatg tccacgccgc accgcaaaag gcaaaaaccg catc
//
LOCUS       DAXHKG010000135         4692 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.135, whole genome shotgun sequence.
ACCESSION   DAXHKG010000135 DAXHKG010000000
VERSION     DAXHKG010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.135"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(14..223)
                     /locus_tag="ACFMWP_001778"
     CDS             complement(14..223)
                     /locus_tag="ACFMWP_001778"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892336.1"
                     /translation="MPSENLSDGIFLPKQPYFLSGLQNLSETTETTLPSFPQKRESRT
                     QHGKNLSEATTIFSSSFPQKRESRT"
     gene            complement(241..1179)
                     /locus_tag="ACFMWP_001779"
     CDS             complement(241..1179)
                     /locus_tag="ACFMWP_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC5892337.1"
                     /translation="MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIWLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVARLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMPHAGEISGNDTVRIHIEDREIVRFR"
     gene            complement(1188..2063)
                     /locus_tag="ACFMWP_001780"
     CDS             complement(1188..2063)
                     /locus_tag="ACFMWP_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC5892338.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNGLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLTRTWNKAGLLHGWRNEC
                     FDLTDGGGNILFSLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPLIRPVSQLHSLRPVSWGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2245..2321)
                     /locus_tag="ACFMWP_001781"
     tRNA            complement(2245..2321)
                     /locus_tag="ACFMWP_001781"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2285..2287),aa:Met,seq:cat)
     regulatory      2471..2570
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2661..4562
                     /gene="thiC"
                     /locus_tag="ACFMWP_001782"
     CDS             2661..4562
                     /gene="thiC"
                     /locus_tag="ACFMWP_001782"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HFC5892339.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGAEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGGNVTQLHYARRGIITPE
                     MEFVAIRERLKLDELSQKSEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTADRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTSKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1136 a         1326 c         1237 g          993 t
ORIGIN      
        1 gtttctttag attttatgtt ctagattccc gcttttgcgg gaatgacgat gaaaagattg
       61 ttgtcgcttc ggataaattt ttgccgtgtt gggttctaga ttcccgcttt tgcgggaatg
      121 acggcagggt ggtttctgtt gtttcggata aattttgcag ccctgataaa aaatatggct
      181 gctttggtaa aaaaatgccg tctgaaaggt tttcagacgg cattttgttt ttaagaagca
      241 tcaacggaag cggacgattt ccctgtcttc gatatggatg cgtaccgtat cgtttcccga
      301 tatttcaccg gcgtgcggca tatcgaggtt cagccacagg atgccgtgtt ccggatggag
      361 gacggacagg ctgaacgatt cgggcaaaca ggtacgggat aatacgcggc actccatgcc
      421 gtcttggtcg aaacgcaccg catgttgcgg aatatggcgg tcatcgtcgg tattgggcaa
      481 acccatcagt cgggcgacct gcacgccggc aggcgtttga accaaggttt cgggcgtacc
      541 gcattgaagg attttcccct cgtgcatgac ggcgatttcg tccgccgccg tgcaggcctc
      601 ttcgggcgaa tgcgtcacca aaacggcagg gatgccgccc ttgcggatac gttcggcagt
      661 catgcggcgc agccggtcgc gcaaatgcgt gtccaaactg gaaaacgatt cgtccaacag
      721 cagcagggaa gggcggacaa ccaaagcgcg cgccaacgcc aaccgttgct tctcgcctcc
      781 ggaaagtttt tcaggcttgc ggtgcgcctc gttttccagt ccgacttcgg caagtgccgc
      841 catggcaagg cgttcggctt cggctttcgg cattttttgc attttcaaac cgaatgccgc
      901 attttccagc gcactcatat ggggaaacag cgcgtaatct tgaaacatca gagaaatacg
      961 gcgtttttcg ggcggcatac gggtaatgtt ttccccgttc agccatattt ccccaccgtc
     1021 cggccggaca atccccgcaa tcatattcag cagggtggat tttccgcatc ccgaccgccc
     1081 caaaacggcg agtattttgc cgcgcccgac agtcaggcag atgttgtcgg cgacggtttt
     1141 attgccgaag cgtttgcaga gtccgttcag ttcaagcatg gcgcatccta taaacgtatg
     1201 ccgtccagcc actcggacag cggatgggcg gcatcaatca gaccgtaacg gcaaaacgcg
     1261 tccagcgtaa ccagttgcgc gtcgtgcatc atgtttcccg acaacatggt ggcaaccaag
     1321 ctgccgatgt ccattttctc aaaacacgca acctcaccgt cctgattttc aggtaggaag
     1381 gtttcgggca ggacggcatc gaatacatac aggatttcat tgtgcacacc ccagctgacg
     1441 gggcgcaggc tgtgcagctg cgataccggg cggatgagcg gaaacagcgt tttatccaaa
     1501 ccggcttctt cgctgctttc gcgacacacg gtttcagacg gcaattcacc gctggaaaca
     1561 ccgccggcgg cagtattgtc gagtttgtcg ggatcgactg ctttgtgcgg actgcgcctg
     1621 cctatccaga aatgccatcg gccgtccgat tcggtcagac cgttgagatg gacggcgcgg
     1681 ctgagtagtc cgaacgggcg gaaagcggcg cgttcaagtg agaacaagat attgccgccg
     1741 ccgtcggtca ggtcgaaaca ctcgttgcgc catccgtgaa gcagccccgc cttgttccat
     1801 gtgcgggtga ggtgctgcaa gcggccgccc atatctgacc agccgtccgc attcagaaaa
     1861 atgccgtctg aagactccga gcagcctgcc tcccagtctt ttttgacgcg ctccgcccat
     1921 tccggcgaca ggttgcccaa aggcaggccg ttcagataca gtgttttcca gcaactttct
     1981 gcaccgtaac ttgcttttgc ccactcgaac agggcatcaa ggtcgtgttt gctgacggat
     2041 tcggtaaaac ggacggtcgg catagtcggc tttcttgaag acaatgcgga agattgtagc
     2101 caaactgcct gaatttgcaa ccgcaaacag acggcgggct gccgttccga tattgcggca
     2161 ggaaggaaaa tccggcaaaa aacggaggcg gcaggaaaca ggcaaaacaa aacccctcgg
     2221 cattgaaccg aggggtttga tatttggttg cgggagcagg attcgaacct acgaccttcg
     2281 ggttatgagc ccgacgagct accatgctgc tccatcccgc gtcagaagat gaaactatac
     2341 ggcagatttt ttatgttgtc aaacattatt tccgcgaaaa atcataaaat tttgccgtcc
     2401 ggcggtttat gcctgatttg aaatatcatt ttctttacaa aagttcatgt tcgtgattta
     2461 attttggtta acatcgaaac aggggtgctg cctgatgttc aggcggctga gaaataccct
     2521 ttacacccga tcgggataat acctgcgtgg ggagttttca cggattctgt ctttcagaca
     2581 gcattggttt tcaaatgccg tctgaaaacg caaaacgctc ctgtttcttt attctaaacg
     2641 agaaaacagg agcatttttt atgactacgc caaaaaaaac cgccaaaact tccggcaacg
     2701 aagcgcgcga acttgccgac ttgagcgaag acatcggtat ccgcttcaaa tatccgaact
     2761 cggaacgcgt gtatctgcaa ggcagccgcg acgacatccg cgtgcctttg cgtgaaatcc
     2821 gtcaggacga cacctatacg gcgcaaggcg cggaagccaa cccgccgatt cccgtctatg
     2881 acaccagcgg cgtgtacggc gatccagcgg cacacatcga cctgaaacaa ggcctgccgc
     2941 acatccgcac cgcatggctg aacgaacgcg gcgataccga aatcctgccc aagctctcca
     3001 gcgaatacgg catcgaacgc gcacacgatc cgaaaaccgc ccatctgcgc ttcaaccaaa
     3061 tcacccgccc gcgccgcgcg aaaagcggcg gcaacgttac ccagcttcac tacgcgcgcc
     3121 gcggcatcat cacgcccgaa atggagtttg tcgccatacg cgaacgttta aaattagacg
     3181 aattgtccca aaaatcggaa tacgccaaac tcttgaaaca gcacgcaggg caaagtttcg
     3241 gcgcgaatat cccgacccat cccgaccaaa tcacgcctga attcgtgcgc cgagaaattg
     3301 ccgccggacg cgcgattatc cccgccaaca tcaaccaccc cgaactcgaa ccgatgatta
     3361 tcggccgcaa cttccgcgtc aaaatcaacg gcaacttggg caattccgcc gtcacttcca
     3421 gcctgaccga agaagtcgaa aaaatggtgt ggtcgctgcg ttggggcgcg gacacgatta
     3481 tggatttgtc caccggcgcg cacatccatg aaacgcgcga atggattatc cgcaacgcgc
     3541 ccgtccccat cggcaccgtg ccgatttacc aagcgttgga aaaaaccggc ggcattgccg
     3601 aagatttgac ttgggatttg ttccgcgaca ccttaatcga gcaggcggaa caaggcgtgg
     3661 actatttcac catacacgca ggcgtgttgc tgcgttatgt gccgatgact gccgaccgcc
     3721 tcaccggcat cgtatcgcgc ggcggttcga ttatggcgaa atggtgtttg gcacatcatc
     3781 gggaaaactt cctttacacg catttcgacg aaatctgcga aattatgaag gcgtatgacg
     3841 tatcgttcag cctcggcgac ggtttgcgtc ccggctgcat tgccgatgcc aacgacgaat
     3901 cccaattcgc cgagctgcac accttgggcg aattgacctc caaagcgtgg aaacacgacg
     3961 tacaggtgat gatcgaaggt cccggccatg tgccgctgca acgcgtcaaa gaaaatatga
     4021 ccgaagagtt gcaacactgt tttgaagcac cgttttacac cctcggcccg ctcgttaccg
     4081 acatcgcccc cggctacgac cacatcacct cgggcatagg cgctgccaat atcggctggt
     4141 acggcacggc gatgctctgt tacgttaccc ccaaagaaca tttgggactg cccgacaaag
     4201 aagacgtgcg taccggcatc atcacctaca aactcgccgc ccacgccgcc gacctcgcca
     4261 aaggctggcc gggcgcacag ttgcgcgaca acgccctgag caaggcgcgt ttcgagttcc
     4321 gctggcgcga ccagttccgc ctaagcctcg accccgaacg cgccgaaagc ttccacgacg
     4381 aaaccctgcc cgccgaaggc gcgaaaatcg cccacttctg ttcgatgtgc ggccccaaat
     4441 tctgctcgat gaaaatcacg caggaagtgc gcgactacgc cgacaagcaa aaagcccaac
     4501 ggcagggcat ggaggaaaaa gcggtcgagt tcgtcaaaaa aggagcgaag atttacagct
     4561 aaaacgtcaa gcaaaaaatg ccgtctgaaa cccggaaaaa aggcttcaga cggtattctt
     4621 tcgcttgtga aaatatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca
     4681 gtacagatag ta
//
LOCUS       DAXHKG010000136         4650 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.136, whole genome shotgun sequence.
ACCESSION   DAXHKG010000136 DAXHKG010000000
VERSION     DAXHKG010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.136"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            110..1051
                     /gene="miaA"
                     /locus_tag="ACFMWP_001783"
     CDS             110..1051
                     /gene="miaA"
                     /locus_tag="ACFMWP_001783"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HFC5892340.1"
                     /translation="MPTPKAFALLGPTACGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTRLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1055..1774
                     /gene="tadA"
                     /locus_tag="ACFMWP_001784"
     CDS             1055..1774
                     /gene="tadA"
                     /locus_tag="ACFMWP_001784"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HFC5892341.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1779..2267
                     /locus_tag="ACFMWP_001785"
     CDS             1779..2267
                     /locus_tag="ACFMWP_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HFC5892342.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGMFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2333..3085
                     /gene="rlmB"
                     /locus_tag="ACFMWP_001786"
     CDS             2333..3085
                     /gene="rlmB"
                     /locus_tag="ACFMWP_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HFC5892343.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3147..4538)
                     /locus_tag="ACFMWP_001787"
     CDS             complement(3147..4538)
                     /locus_tag="ACFMWP_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HFC5892344.1"
                     /translation="MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
BASE COUNT         1162 a         1490 c         1126 g          872 t
ORIGIN      
        1 aaggcatacg gtaaacacgc ccccttgccg tcggcgtgct tccgcaaacc aaaatataac
       61 gtcggcacgc tttccgctat aatccgtatt tttccaaacc tgaaacgtta tgccgacccc
      121 gaaagccttt gccctgctcg ggccgaccgc ctgcggcaaa accgcgctcg ccctcaaaat
      181 tgccgaaacc ttgcctgtcg aaatcatcag cctcgattcc gcgctggttt accgcgatat
      241 ggacatcggc acggcgaaac cgtctcatgc cgagcgttcc tttgtaccgc accaccttat
      301 cgacatcatt acgcctgttc agacatacag tgccgcccgt tttgtcgaag actgcacgcg
      361 tctgattggc gaaatcacgg cgcgtgggaa atatccgctg attgtcggcg gcacgatgat
      421 gtatttccgc gccctgaccc aaggtttgaa cgatttgccc gaagccgacg cctgcctgcg
      481 tgccgacttg gacgaacaaa aacaaatgta cggcttggat ttcctctacc gcaccctgca
      541 aaaagtcgac cctgaaacag catgccgtct gaaaccgaac gacagccagc gtatcggacg
      601 cgctttggaa gtttattatt taaccggcaa accgatgagt acgcatctcg gcagcccaac
      661 ctcccatacg ctccccttcg atttgcatac cgccgccctg attcccgaaa accgcgcccg
      721 cctgcatgaa aacatcgccc tgcgtttcca cctgatgctt gaacagggct ttatcggcga
      781 agtagaaaac ctgcgccgcc tctatcccag cctgaccgcc gactcccctg ccatacgctg
      841 cgtcggctac cgtcaggcat gggaatatct ggacggaaaa accgatttcc cggcatttgt
      901 cgagaaaggc attgccgcca cgcgccaact tgccaaacgc caactgactt ggttgcgcaa
      961 aacaccttta gactgcgtta ccgacccgtt ttcagacggc aattcatgca cacgcctgat
     1021 tgaggcggca aaacggtttt tcggcgcata aactatgctg accacgccgc cgctcgcccc
     1081 caaaaccgtc gccgccctac acaggctcgg tatccgtacg ctcgaagaac tgcggcaaaa
     1141 cggcgcggtt caaaccttct tgttattgaa ggcatcaggt ttgaccctca cgaaaagcac
     1201 gctgtggcag cttcagtcgc tgctggacgg cacgccgccg caagaaatgg cgcaacacga
     1261 taaaacccgc ctgcttgccg agttgaaaaa ccatccgccc gtcgccgcct ttcccccgca
     1321 aggcgaaatg gcgcatttca tgggtttggc attggaacag gcgaaactgt ccgcattaat
     1381 gggcgaaata cccgtcgggg cagtcatcgt ttcagacggc aaaatcatcg catcggcaca
     1441 caacacctgc attgccgact gcaatgtcag ccggcacgcc gaaatcaacg ccttggcaca
     1501 ggcaggcagc gaaatgcaaa actaccgcct tgacggatgc gacatctaca tcaccctcga
     1561 accctgcgcc atgtgcgcgt ccgcactgat acaggcacga atcaggcgcg tgatctacgg
     1621 tgcggcagaa cccaaaaccg gcgcggcagg aagcatcgtc aacctgtttg ccgacaaacg
     1681 cctcaatacg cacaccgcca tacggggcgg aatcctgcaa gaagaatgcc gcgccgtatt
     1741 aagccgtttt ttccaaaaca aaagaaaagg ttgaacctat gaccgccttg ctcgtcatcc
     1801 tcgccctcgc cctgatagcc gccggtacgg cgggcatcgt ttaccccgcc ctgcccggat
     1861 tggcattgat gtttgccgga acctggctgc tcgcctactc cggcggctac caaatctacg
     1921 gcgcgggcgt tttgtggacg gtcggactca tcagccttgc cggcatactg gcggactatg
     1981 tggcaggcat atgggggaca aaatataccg gagcgggcaa gctcgccgtt cgcggcgcat
     2041 tggtcggcag tatcatcggt atgtttttct cccttcccgg actaatactc ggtcccttta
     2101 tcggcgcggc ggcaggcgaa ctgatcgatc ggcgcaatat gcttcaggca ggtaaagcgg
     2161 gcttgggtac gctgttgggg cttgtcgtcg gcacggcgtt caaaatcggc tgcgccgtat
     2221 ccatcttgtt tatcctgttg gtgaaataca tcgcctacct gttttaaccc cttcagacgg
     2281 cataccggca aattgctaca atgccgtctg aacccttttc acaaagcacc atatggcaaa
     2341 ccaaagacct atctacggct tccatgccgt caacgcccga ttgtggcaaa accccaaatc
     2401 catcgtcgaa ctctatgtcc aagaaggcaa aaacgatgta cgcacgcgcg aagtgttgga
     2461 aaaggcggca aacgaaaaca tccgcgtata ttttgccgat gccgaccgcc tcaacgccat
     2521 cagcaaaggt gcgcgccatc agggcgtggt cggatttatc gatgcctcca aaaaccacgt
     2581 ccacctcgaa gacgtattgg aaaacttaag cgaaccgccg ctgctgctga tactcgacgg
     2641 catcaccgat ccgcacaacc tcggcgcgtg cctgcgtacc gccgacgcaa tgggcgtaca
     2701 tgccgtcatc gcaccgaaag acaaaagcgc ggggctgaac gccaccgtca gcaaagtcgc
     2761 cagcggcgcg gcggaaaccg tcccctacat caccgtaacc aacctcgccc gcaccctgcg
     2821 cgagctgaaa gaatacggca tttggatcat cggcaccgat atgggcggca acgccgacct
     2881 ttaccattgc gatctgcccg acagcgcggc atgggtgatg ggcaacgaag gcgacggtat
     2941 gcgccgcctg acacgcgaac attgcgacat gctggtgtcc atacccatgt tcggcacggt
     3001 cgaaagcatg aacgtctccg tgtctgccgg aatggtatta agcgaaaccc gccggcagcg
     3061 cgtattaaaa aacgaaaaag cgtaagcctc aaaaacaatg ccgtctgaaa cagggattct
     3121 gtttcagacg gcattcgttt tcaaaatcag tgttccaagt ggtcggtatc aaacttgacc
     3181 gccgcctcgg ttttatcttc gggcaagacc aaattcagca agactgccgt aatgccgccg
     3241 gcggaaatag agttttggaa caagacaggc aggtttttaa acacttccgg ctcaaacgcg
     3301 acacccaagc ccaaaccgac cgacgttgcc gcaattaccg cttcgcgcct gcggatgccg
     3361 tggctgacca aaatccgcac gcccgcaatc gcaatcaagc cgaacatcaa aaccatcgcg
     3421 ccgcccaaca ccggactcgg aatcgtcgta aacgcgcgtc cgacaacggg gaacagaccc
     3481 aacagcacca aaatcacggc aatatatttg cccacatggc gcgaagccac gccggtcatc
     3541 tgaatcacgc cgttgttttg cgcaaacgtc gtcagcggca gcgaacccaa agccgtcgca
     3601 atcaccgaca ccaagccgtc agccaacacg ccgccgcgca ggcgtttggt gtattcctcg
     3661 ccttcaatcg gctgatcgga caccattgcc gtcgccgtca aatcgccgac cgcctcaaac
     3721 acgctcaaca ggaaaatcgc gcccgccaca ataaatgcgt gccagtcgaa agcaaaaccg
     3781 tatttaaacg gtacgggcag cgtaaccagc ggcaggtttt gcagcgcgga aaaatccacc
     3841 ttgcccaaaa acagcgcgac aatgtaaccg gcaatcagac cgaccgcgat gccgctcatc
     3901 cgcaacagcg ggtttttcat gcagttgaat atcaacacaa tcagcaacac cagcgaagcc
     3961 agccccaagt tttccatcga gccgaacgtg ccgtccgcct tcgcgccgaa gccgccgccg
     4021 aaatcggtaa taccgacgtg taccaaactc aagccaatga gcatcacgac cacgccgctg
     4081 accgtcggcg taatcacttt tttcaaatac ggcaaaagcc acgccgagaa acacaccaaa
     4141 aacgcgccga caaacgatac acccaagagc gtcgaaatca tcgcatcctt agtcaaaccg
     4201 ccctccttca tccctgcgcc cagcgcaatc atcacggtaa cgaacgaaaa attcaccgac
     4261 tggatggaca gcatccccga accgaccggc ccgaagcggt tgacctgcaa ataagtgccg
     4321 acacccgacg caaccatcgc catcgacacg agatacgccg tcatctccac cggcaattcc
     4381 agcgcgccgc ccacaatcag cgcgggcgta atcatcggca caaaaatcgc caaaagatgg
     4441 gtaaccgcgc tcaagagcgc attaccgaac ggcggcctgt cttccaaacc gtacaccaaa
     4501 tcaggcgcat ccgcaccttt gcccaactga ccgctcattg tatttcctta ttttaaaggt
     4561 tgaaaaatcc aagcgcggat tgtagcgaat ctgccgcacg gcttcaattt gcatttcaga
     4621 cggcatccgt ctggtccaca cgtttaccac
//
LOCUS       DAXHKG010000137         4574 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.137, whole genome shotgun sequence.
ACCESSION   DAXHKG010000137 DAXHKG010000000
VERSION     DAXHKG010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.137"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(58..1851)
                     /locus_tag="ACFMWP_001788"
     CDS             complement(58..1851)
                     /locus_tag="ACFMWP_001788"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HFC5892345.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQTNRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIVKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2096..3205
                     /gene="proB"
                     /locus_tag="ACFMWP_001789"
     CDS             2096..3205
                     /gene="proB"
                     /locus_tag="ACFMWP_001789"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HFC5892346.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITCQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSNATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3218..4480
                     /locus_tag="ACFMWP_001790"
     CDS             3218..4480
                     /locus_tag="ACFMWP_001790"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HFC5892347.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRLDLEAAAGNIPESMTDRLLLDEKRIGAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGRESSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRNRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVW
                     HIETHSTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1045 a         1244 c         1271 g         1014 t
ORIGIN      
        1 gccgcaatgc cgtctgaagc ctttttatgc ttcagacggc atcgtctgtt ttcacgctca
       61 aatcgtaccg ctgccttgcg ctttcggttt ggcggcacta aattccagtt tgctcaaagc
      121 ggaaaggtag gctttggcag tggcaaccaa aacgtcggta tccgcgccct gaccgttgac
      181 gacgcggttg ccgcgtgcca gacggacgct ggtttcgcct tggctttccg taccttgcgt
      241 gacggcgttg acggaataaa tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc
      301 tttgaaaatt gcatcaaccg gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt
      361 gatgctgaac acgatgtcgg cgcgcggctc ttcgccggtt tcggtgctga ttttttggga
      421 gatgaatttg tagctctcgg cattcatgct gcccatttcg tcggatacca gtgcgtgcag
      481 gtcttcatcg aagatttcgc gttttttgtc ggcgagttct ttgaagcggg caaacgcggc
      541 gttcagtgcc tcttcgcttt ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc
      601 gttgcggccg gacaatttgc ccaagctcaa acggtttgtt gcccagccga ccgattcggc
      661 ggacataatc tcgtaagttt cgcggtgttt cagcaccccg tcctgatgga tgcccgattc
      721 atgcgaaaag gcattggcac cgacaatggc tttgttgggc tgcacgggat agcccgtaat
      781 ggtggacacc agtttggacg aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc
      841 gaacaagtcg tggcgcactt tcaacgccat cacgatttct tcaaccgaag cattgcctgc
      901 acgttcgccc aagccgttga cagtacattc cacctgacgc gcaccgcctt ttaatgcggc
      961 aagcgaattg gcaaccgcca agcccaaatc gttgtggcag tgtgccgacc aaacgacttt
     1021 gccgccgttg ggcgttttga caatcagttc gcggaaaaat tcttcggttt tgtacgggat
     1081 ggaatagccg acggtatcgg gaatattgat ggtggtcgcg cccgcttcaa ttaccgcgcc
     1141 gcagatttcg gcaaggaaat cgatttccga acgcaacgcg tcttcgcagg aaaattccac
     1201 atcgtcggtg tattcacgag cgattttcac cgctttgacc gccgcctcaa tcacctgctt
     1261 cggcttcatc ttcaatttgt actccatatg gatggggctg gtggcgatga aggtgtggat
     1321 gcgttttttc ggcgcgggcg caacggcctc acccgcctga cggatgtccc gctcgatggc
     1381 gcgggacaat gaacagaccg ttgatttggt aatggttttc gcaatcgcat tgaccgcctc
     1441 gaaatcgccc gggctggcag cggcaaaacc cgcttcgatg atgtccacac ccaatttttc
     1501 cagctggcgg gcgacgcgga ttttttcctc tttggtcata gcggcgccgg gcgactgctc
     1561 gccgtcgcgc agggtggtat caaaaataat tacgcggttg gtctgtgtca tttctgttct
     1621 ctccagagat tcgttttttt gtaaaaaagc attcaaatcc agcggtctgc cttgcgattc
     1681 ggcaagcgcg gtcagctttt gcagttgcgc cagaggcagc gagccgcgcg tgcgccattt
     1741 atagatggcg gcggtcgtcg cggcattttc gggatcgtgc tgtttcaacg cttcggcaag
     1801 cgcgttcacg ccgccgaaat aagcaaccaa gcggtctata tctaattgca tggtagtcct
     1861 tgtctaaaat aaatcagcct acagcagaaa tatggacagg attatacgca ttttggacaa
     1921 aacggcaata taaatttgaa aaatctcaat aagccgccat agattttatt aattttatac
     1981 attttgtcca ttttattgca gacgcggcgt gattgttgac aattgcggca gaacagggca
     2041 aattcggcgg cacaaggtgg caacgagaca ggacaaacca acaaggatgg aaacaatgaa
     2101 atacaaaaga atcgtattta aagtcggcac atcttcgatt acccattcgg acggcagtct
     2161 ctcgcgcggc aaaatccaaa ccatcacctg ccagcttgcc gcattgcatc atgcgggaca
     2221 cgagctggtc ttggtgtctt ccggcgcggt tgcggcaggg ttcggtgcgc tgggtttcaa
     2281 aaaacgtccg gtcaaaatcg ccgacaaaca ggcttccgcc gccgtcgggc aggggctgct
     2341 gatggaagaa tatacggcaa acctgtcttc agacggcatc gtgtccgcac aaatcctgct
     2401 cagccgcgcc gactttgccg acaaacgccg ctaccaaaat gccggcggcg cactttccgt
     2461 gctgctgcaa cgccgcgccg tccccatcat caatgaaaac gatacggttt cggttgagga
     2521 attgaaaatc ggcgacaacg acacattgag tgcgcaagtg gcggcgatga tacaggcaga
     2581 cctcttggtg ctgctgaccg acatagacgg tctttacacg ggcaacccga acagcaatcc
     2641 cgatgccgta cggctggaca aaatcgaaca catcaaccat gaaatcatcg aaatggcggg
     2701 cggctcgggt tcggcaaacg gcacaggcgg tatgctgacc aaaatcaaag cggcgacgat
     2761 tgcgaccgag tccggcgtac cggtgtatat ctgttcctcg ctcaaacccg atgcacttgc
     2821 cgaagctgcc gaacatcagg cggacggctc gtttttcgtc ccccgtgcca aaggtttgcg
     2881 gacgcagaag caatggctgg cgttctattc cgaaagccgg ggcagcgttt atgtggacga
     2941 aggtgcggaa cacgctttgt ccgaacaggg gaaaagcctg ctgatgtcgg gcattgccgg
     3001 aatcgaaggg catttttccc gtatggacac tgtaaccgtg tacagcaacg caaccaaaca
     3061 gcctttgggc aaagggcgcg tcctgttcgg ttctgccgcc gccgaagacc tgctcaaatc
     3121 gcgtaaggcg aaaggcgtgt tcatccatcg ggacgactgg atttccatca cgcccgaaat
     3181 acgcctgctt ctgaccgaat tttagaaaag gaaacccatg tcaaacacac aaaaacagct
     3241 tgcccttgcc aaagcggcaa aaaaatccgt caacacggcg gatacggaag aaaaaaaccg
     3301 cgcgctgctt gctatggcgg acagcttgga agcggcggcg gcagatattt tggcggcaaa
     3361 ccgtttggat ttggaagcgg cggcaggcaa cattcccgaa agcatgaccg accgcctttt
     3421 gttggacgaa aaacgcattg gcgcgatggc ggacggcatc agggcggttg ccgcgctgcc
     3481 cgaccccgtg ggcgaaatac tggaaacctc gactctgccc aacggcttgg aaatcgtcaa
     3541 aaagcgtgtg gcgatgggcg ttatcggcat tatttacgaa agccgcccga acgttacgtc
     3601 cgatgcggcg gctttggcac tgaaaagcgg cagcgcggtc gtactccgca gcggcaaaga
     3661 tgcattccaa tccgcacgcg ccatcgttgc cgccctgaaa acggggttgg cacaaacccg
     3721 catcgacccc gacgcgctcc agttgattga agacaccggg cgcgaaagca gttacgaaat
     3781 gatgagggcg aaagattatc tagacctgct gattccgcgc ggcggggcgg ggctgatacg
     3841 ggcggtggtt gaaaatgccg tcgtgccggt cattgaaacg ggaacgggca tcgtccacat
     3901 ttatatcgac aaggacgcgg attgggacaa ggcgctccgt atcgtgtaca acgccaaaac
     3961 cagccgcccg tccgtgtgca actcgatgga agtgctgctg gtgcatgaag acattgctgc
     4021 cgacttcctg cccaagctcg aacggctgtt ggttcgcaac cgtatagaag ccggactgcc
     4081 gcccgtccgc ttccgtttgg atccgcaggc ggcgcggcat atcggcggcg aagcggcggg
     4141 tgcagacgat ttcgataccg agtttttaga ctacatcctc gctgtgaaaa ccgtcgcttc
     4201 ggtcgaagag gcggtctggc acatcgaaac ccacagcaca caccattcag acggcatcgt
     4261 taccgaaaac cgccacgctg cggactattt cacgacccat atcgattctg ccgccgtgta
     4321 tgtcaacgcg tccacgcgct ttaccgacgg cggcgaattc ggcttgggtt gcgaaatggg
     4381 catctccacg caaaaactcc acgcccgggg tccgatgggt ttgaaagagc tgacgagtta
     4441 caaatacatc gtacaaggca cgggacaggt cagggaataa tccgaattca aatgtctgat
     4501 atagtggatt aactttaaac cggtacggcg ttgcctcgcc ttagctcaaa gagaacgatt
     4561 ctctaaggtg ctga
//
LOCUS       DAXHKG010000138         4523 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.138, whole genome shotgun sequence.
ACCESSION   DAXHKG010000138 DAXHKG010000000
VERSION     DAXHKG010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.138"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(1017..1787)
                     /gene="xth"
                     /locus_tag="ACFMWP_001791"
     CDS             complement(1017..1787)
                     /gene="xth"
                     /locus_tag="ACFMWP_001791"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC5892348.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSTVERQWFQNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRVDLETRALERPSDHAPVAAEFDW"
     gene            complement(1847..2128)
                     /locus_tag="ACFMWP_001792"
     CDS             complement(1847..2128)
                     /locus_tag="ACFMWP_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HFC5892349.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSGHLSRLRVEGLVDFTRYHRIIEYRLISEDAATILRTIRDLENKRAV"
     gene            2185..2463
                     /locus_tag="ACFMWP_001793"
     CDS             2185..2463
                     /locus_tag="ACFMWP_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892350.1"
                     /translation="MIVIIFINLIINQIFMDDCTGLYVPFPTFFANTRKGGLSDGIKL
                     PPLPCLTLLPNGIIRIVQKMPYNRRTSCPADASVPSGKQNTCLKCCFF"
     gene            complement(2596..3477)
                     /gene="nadC"
                     /locus_tag="ACFMWP_001794"
     CDS             complement(2596..3477)
                     /gene="nadC"
                     /locus_tag="ACFMWP_001794"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HFC5892351.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGISTATARAVAEVAKYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCDSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(3552..4490)
                     /locus_tag="ACFMWP_001795"
     CDS             complement(3552..4490)
                     /locus_tag="ACFMWP_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892352.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVGRLRIWANSADTEEVRQKRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIEEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1040 a         1134 c         1205 g         1144 t
ORIGIN      
        1 ctgatgcaga tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta
       61 caaatagtac ggcaacgctg tactggttta aatttaatcc actatatttt gtaatagctg
      121 ccattatgcc tactaggata tataccttct atataatcct tatttaaata aaaaccctta
      181 taaaaatctg tgttatctgt cgggattgaa aaaaagattt tatctttctc atcaggttta
      241 tatttgctat caatatcaaa aagagaataa ggattacaat gagttcgaca tactaggtaa
      301 aaatttatat cttggatcat gaaatattcg atatttatca ggatcgaaag atgctaaaaa
      361 ttcatcaata tcggtactgg atattttgtc atcactaata aacatcgcta gagatgggcg
      421 actttgattt tccatttgtt gattagtaaa ggatataaat actaacttgc cattgtcaaa
      481 ccacatagat ttatatagtg gattaaattt aaaccagtac gtcgttgcct cgccttgccg
      541 tactatttgt actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactatag
      601 ttattgcctt tgggagaatc aattctgaca gcacataaca taggttcatc tttacagtcg
      661 ttatattggg tttcatcaaa ctcaactgca tagcacaata aaggcaatag gaaaaaaagg
      721 agattaattt attactatac ataaggcagc ctgattattc attctaaaat aaatccggtt
      781 tttaatattt gattctgctc cggattatat acataataaa ttttactgct ccaaaatctg
      841 atattaaccc tatggatttc ataaattttt cagaaaaata ggctgtgctt gaacaatccg
      901 ccgactccgg ctgtttgtca gggaaaaggc aattattttc ggttagtcag cagcctatcc
      961 tattgaatca cttaaagata tggatgtttg tcaacgccat atcaaaacac ggtcttttac
     1021 caatcgaatt ctgccgccac gggcgcgtgg tcgctcggac gttccagcgc gcgcgtctcc
     1081 aaatcgacac ggacatcctt caaaacggcc gccatttcgg atgtaaccaa tatatggtcg
     1141 atacgcaggc ccagtttgcg ctggaacatc gcgccgcgat agtcgaacca tgtgtaaaac
     1201 gcaccttcgg gatggatatg gcgcaaactg tcggtcaatc ccaaatccag caggttttga
     1261 aaccactgcc gttcgacggt cgaacagtgg attttttcat accatttttc agggtcgtaa
     1321 cagtccgcat cggcaggcgc gatattgaaa tcgcccaaca gcaccagttt gccgtggcgt
     1381 gccatttcat cgcggacaaa ttcggttaac gcggcaaacc attgttcttt atatttgaat
     1441 ttcgggctgt cgagggcttc gccgttgacg caatagacat tgatgacgcg cacgccgccg
     1501 acggttgccg caatcacgcg ccgttgcgga tcgtccggca gcgcgggcag cccgatatgc
     1561 acgtcttccg gcgcgttgcg gctgacgatt gccacgccgt tgtaggtttt ctgcccgctc
     1621 caaacacagt gccagcccat catctgcaag gcggcagccg gaaatttgtc ctgatcgagt
     1681 ttgagttcct gcaaaaccaa aatatcgggc ggattgtcgg caagcaggtt ttgcacctgc
     1741 ggcagccgca cattgagcga attgacgttc caagtggtga ttttcataac atttccgaaa
     1801 aatgccgtct gaaacgttca gacggcaaaa ggaaaggatt ttaacactat accgcgcgtt
     1861 tgttttccaa atcgcggatt gtccgcagaa tcgttgccgc gtcttcggaa atcaggcggt
     1921 attcgataat gcggtggtaa cgcgtaaagt ccaccagacc ttccacgcgc agtcggctca
     1981 aatggccgga aacggcggtg gccggcaggg ataaggattt tgccagttcg gcgatattgc
     2041 gttcgctgtc caacagttgg atcagtatcg ccatacgttc gggatgcgcc ataagtttga
     2101 gtatggtgtg gagcggtatt gtgttcatcg gtattcctaa aacctttgcc gcccgccaag
     2161 cggattgacg ggcgacagat atggatgatt gtgattatct ttataaatct tattataaat
     2221 caaatattta tggatgattg tacaggattg tatgttcctt ttcccacttt ttttgcaaac
     2281 acgcgtaaag gcgggctttc agacggcata aaactgccgc ccctaccctg cctcaccctg
     2341 ttgccgaacg gaatcatccg cattgttcaa aagatgcctt acaaccgccg cacgtcttgc
     2401 cctgccgatg cctccgtgcc ttcgggcaaa caaaatacct gcctgaaatg ctgttttttc
     2461 taaagcatca cgaccttcac gaaaaatgcc gtctgaagaa tctttcagac ggcatttcct
     2521 ccttgaggca ataaccggat tacggttagg cggttccttg tctgacatat cagacaactg
     2581 ccgacaccct aaaactcatg ccaagaaatc caaacctatg tccaacgagc ggctgctgtg
     2641 ggtcagatag ccgagggcga tgccgtccac gccggtttgc gccacgcgct tcaggcggtc
     2701 gaagccgatg ccgcccgatg cttcgcaata gacggtgtgg gggtgggcgg tttgcgtgtg
     2761 gcagcggttt gccgcttctt tcagggtttc gtcgtccatg ttgtccagca aaatccgttc
     2821 cgcgcccgct gcgatggctt cgtccagttg tgccaacgtg tccacttcga tttctacgca
     2881 ggtcaacggt ccgaccgcct gttttgcctg ccgaacggct tgggcgatgc tgtcgcaata
     2941 ggcgaggtgg ttgtctttga tgagtacggc atcgtccaaa cccatgcggt ggttcacgcc
     3001 gccgcccgcc ctgacggcgt atttttgcag gacgcgcagc agggggatgg ttttgcggct
     3061 gcacacgatg tctgtaccgt atttggcgac ttcggcaacg gcacgcgcgg tggcggtgga
     3121 gatgccgctc aagtgcgtga ggtagttgag cgcggtgcgt tcggcggcga gcagcgcgcg
     3181 ggcgttgcct tcgacggcgg caagcgtctg acctgcgcgg acgacttgcc cgtctcggat
     3241 ttcggcttgg aagcggacgg acggatccat cgtctgaaag gcgaggcgcg ccaagtccat
     3301 gccggcgata acaccgtctt cgcggctgac gaggaaaagt ttggcggttt tatcgggcgc
     3361 gatgacggcg gcggacgtaa tgtcgccgcg cctgcccaaa tcttcgctca aggcttgttc
     3421 caccatgggg cgcaacaggg tgtcgggcag tgggaagagg gtgttttcag acggcatggg
     3481 gtttcctttg ttgaaaaaga ttgatgttgc accgatgggc aaaacttcgt ttgatgtcgt
     3541 ctgaaaacgg gctaacggct gcccagcggc aatccgatgt ccgaaatcag cctgtcgggc
     3601 aggacgtcgt cgcggaagcg gcaaagctgc gcgggacggc ctttgctgcc cgatacgccg
     3661 gtatccgacg gctcgataag gttttgctgc tgaatctggc ggcggaagtt ttgcttgtgc
     3721 agcaatctgc cgctgatggc ttcgacgctg ttttgcagtt gcagcaacgt gaattcgggc
     3781 ggcatcagtt cgaaaatcac ggggcggtat ttgattttgg cgcgcaggcg ggacagggcg
     3841 gtcgccagta cgcggcggtg gtcgtggcgc atgggctgcc ccgtaagcgc gaagtcgaag
     3901 tttgcctgcg gctcggcggc ttcctctatc aggccgcttt catacaacat ttcatagcgt
     3961 tgcaaaacgt attcttccga ccagttttcc ggttcgacgc cccaacacaa atgaatgcgc
     4021 ttgagccgct tttggcggac ttcctccgtg tccgccgagt ttgcccaaat gcgcaggcgg
     4081 ccgacgacgg cgtcgcgctg cccgccgtcg gtgcgcaagt cttcccacgg gaaatagccg
     4141 tagcagtcct gccatttcgc atcgggatgc aggatgctgt cggctgcctc gcgcaccagc
     4201 cccaaatagc tgacgtacaa gacgggcatg ccgtgttcgt tgcggcggtg ggtatcgaca
     4261 aaggtgtaaa gctgttccac atagcccata ggctgcgaag tctgcttggc aacccacagc
     4321 ttcacgcccg cctgcaggga attgcgcaga ggggagagcg ggccgttggg caggagcgtg
     4381 ccttgggcga cggtcaacac ccgcaggccg ccgtcggtaa cggcaatcaa tacgggaacc
     4441 agctcgacga tgctttgcgg cggggcttcg gcttcggggt aggcatccat gctcggcttt
     4501 ctgcgggtgg aaaaggcttt att
//
LOCUS       DAXHKG010000139         4509 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.139, whole genome shotgun sequence.
ACCESSION   DAXHKG010000139 DAXHKG010000000
VERSION     DAXHKG010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4509
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.139"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(127..1269)
                     /locus_tag="ACFMWP_001796"
     CDS             complement(127..1269)
                     /locus_tag="ACFMWP_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HFC5892353.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTAGRILLRLTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKR
                     ANVKSLQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WQVGMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1318..1740)
                     /locus_tag="ACFMWP_001797"
     CDS             complement(1318..1740)
                     /locus_tag="ACFMWP_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892354.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1733..2542)
                     /locus_tag="ACFMWP_001798"
     CDS             complement(1733..2542)
                     /locus_tag="ACFMWP_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC5892355.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCNDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2624..3001)
                     /gene="acpS"
                     /locus_tag="ACFMWP_001799"
     CDS             complement(2624..3001)
                     /gene="acpS"
                     /locus_tag="ACFMWP_001799"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HFC5892356.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3201..3968)
                     /locus_tag="ACFMWP_001800"
     CDS             complement(3201..3968)
                     /locus_tag="ACFMWP_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC5892357.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFNMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSIFGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3978..>4509)
                     /locus_tag="ACFMWP_001801"
     CDS             complement(3978..>4509)
                     /locus_tag="ACFMWP_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HFC5892358.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKAPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVKIIKNASDIQEFSAQDDGLIIIDNVNGLHAGT
                     DYTDKNRHYIRARITV"
BASE COUNT         1106 a         1130 c         1096 g         1177 t
ORIGIN      
        1 cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat
       61 aatatcggcc ggatattaaa aaaagccgtc tgaacatttt tcagacggct tttttgtaca
      121 ctttcctcaa cggttcgatc cctgcaccat atcaatcagg aacaggcggc agtcgaggtt
      181 gccgttataa agcggaattt tccgcttggg cgacaggcgc atgaatttgg gcatttccct
      241 gtcgccggta aacataccga cctgccagcc ggcatagtgt tttttcaacc acgtccccaa
      301 ctgcggatac agtgcctgca aagcgcggac ttcctcaagg cgcacaccgt agggcggatt
      361 ggacaccata atgccgccca cgccgttcgg acggacggat tgcgcgtcgg caacgctgaa
      421 ggaaacgatg tcgtccaccc cggcactgcg tgcgttggcc aatgccgtct gaatgatgcg
      481 gcggtcgctg tcgctgcccg aaatcggtgc aaaagccggt ttaacctgcg cttcggcacg
      541 gcggcgcaaa tccgaccaca gcgttttatc gaaattttgc agtttttcaa aaccgaaacg
      601 gcgcatcata cccggcgcgc ggcgggcggc aatccaagcg gcttcgatag caatcgtgcc
      661 gctgccgcaa aacgggtctt gaaacggctg cgtgccgtcg tagcctgccg agagcagcaa
      721 tccggcggca aggttttcgc gcagcggggc ttcgccggta tcgagacggt agccgcgttt
      781 gaacagggct tcgcccgaag tgtcgatgaa gatttcgaca ttgcgttcgt ccaaaaaggc
      841 gtggatgcga acatcgggcg cggctttgtc cacgctcgga cgtgcgtcgt aaatgtcgcg
      901 gaaagcgtcg cagacggcat ctttgacggt cagtccgaca aattggaggc ttttgacgtt
      961 ggcacgcttt gcctcgattt tgactttgaa cgtctgctgc aaggtaaacc agttgaacca
     1021 gttgatgttt ttggcaagtt tgtaaatgtc gcgctcggtt cggtatgtgc ctttggtcag
     1081 gcgtagcagg atgcggccgg cggtacgcga gtgcaggttg gcggcgtaaa cctgttccaa
     1141 tccgccccgg caggaaacgc cgccgtcaaa cacttgtaca tcggtacagc cgaggctttc
     1201 gagttcttga gataaaacgg tctccaagcc gcgcgggcag gtggcgaaaa gtgtatataa
     1261 agtattcata acgtgtcctt tccggacgga tgttccggca atggcggatt gaaaggttta
     1321 ttcggcggta aatgccgtct gaaatgtccg actgccgatt gtaatgtccg ccgtaaaatc
     1381 gcgcctgcct tcgacacaga tgggcaggcg gatgcgtact gcctgccaag tccccgacgg
     1441 ttgccgctcg aacatatagc ggttgaaacc catatccata tttttcatac tgaagctgat
     1501 gctgacctgt tccgtgccgg cgggcgcgtg ttcgatataa atatcaaacg gttttttggt
     1561 tgaaacggcg gcggcgcgga cgcggcttcc gtccggcagc gtgcaaccct cggtcaaatc
     1621 gcattgcgcc gccacagctt gcggctgctg cgcctgccac cattgcaaca aaacgagctt
     1681 gacggcggca aaggcaatca gcagcagtgc ggcaagcagt aatttacggt ttttattcat
     1741 gattcttccc tattgtttca tcccttacca ccacgtgcgc ccccaatccg agccatagtt
     1801 ttccataacg tgcaaccgtc tgtccgtttg ctgcaagtac gagcggcacg gatacgccct
     1861 gccgcagggc ttctgccgcc tcttgtgcct gaacatcatt gcacacgcgc cacacgacaa
     1921 catccgcgcc cttttcctgc gcctgccgcc attgttcgcg ggtctgcacc atcatccaca
     1981 cgctgtcggc gtgttcgggt ctgtcctgcc attgcgccgc ctccatcaaa acgttcgcac
     2041 cgcttccctc tgccgaaccc aaaggcagga cgcggtacgc gcccatactg ttctccccgt
     2101 gcaaacccgt tttcaggctg ccgtacaaac ggcgcggaac ggacagcgaa cgcaaaagcg
     2161 cgccgttggc gggcagcatg ggggcaacgg taaaatcacc cgccttctgc caagaccatt
     2221 cctgcccttc gcgggattgc ggttcgcccg tccattggcc ggggttgacc cataggaatt
     2281 tcaggcagac gcgggcgtgt tcgtaggaat ggattttggt cagccaaggc gtggcggcaa
     2341 ggatgcggat gccgagttct tcttcaaact cgcgttgcaa ggcttggaag tcggtttcgc
     2401 ccgcttcgac cttgccgccg gcaaattccc aatatccggc atagggtttg ccttcggggc
     2461 gcgagctgag caggtagttg ccgtctgaat cgagcaggat gccggcaacg acgcggataa
     2521 ggggtcgggt gtcttgaatc atggcgggta cgcggttggt cggtcggagt gcaaatgagg
     2581 gacgagcaat gccgtcaacg ggtttgccgc atttcagacg gcattatttt tcggcaacga
     2641 caaacgccaa tacggtgtct tcttcgtcgc tcatgctgag gctgacgcgg ctgatgcctt
     2701 gttcctccag ccatttggac agggcggggc cgtagaaaaa ttcgggcttg cccaatgcgt
     2761 catgcccgat gccgatgttg cggaaggaaa ccgcgccgcg tatgcccgtg ccgacggctt
     2821 tggcgaaggc ttctttggcg gcaaagcgtt tggcgaggta gttgacgggt ttgcccgctt
     2881 gcggaaattc aagcagctct tccggagtga ggatgcgccc ggcaaacgcc tgtccgaatt
     2941 ttttgtttaa gcggatgatg cgcttgaggg aaacaatgtc tgtgccgatg ccgtaaatca
     3001 tatttgcgct ccttcgccct tggttgcggg tagtgatgaa tgtgatgatg aatgccgtca
     3061 atttcttggg gcgttaaaat ggcgtgaata tccacttttg gggttttgtc ggtaacaatt
     3121 ttcactgtaa ccttttgcat ttgaaattct aaaacatcgt gccaattatt taataaggag
     3181 ttaaggcatt taataatgaa ttaaagtttg attaaacccg aatgcccgat tttcagagcc
     3241 aataccaata aaacaataaa aattaacatt ttaaaaaaat ttgggctaat cttagtcctt
     3301 aaccgaattc caacatacaa tccaataaca gacaatacgg acagtaaaaa tattaaaccg
     3361 tattcactct tatttaataa ccaatactgg tctcttagca tatatatttg aacaattttc
     3421 gccaaaagat agcatagatt gcttgatttt acgatacgat ttttattttc tgtttcgcta
     3481 agcaaaaata ttaacaatat gggagacatg gcattggttg aaccgccgat gatgcctgcc
     3541 aaaaacccaa aaagaaccat attcttatta ttggcaacta cttgaatatt ttttgctttt
     3601 gcacatacat ttaaaatacc attgacagaa taatacaatg taatgattgc catcagtaaa
     3661 agcagccaag acactggaag tatcaaaagc aacttcaccc caaaaatgct gccaacgacg
     3721 ctgccgatag caagcaattt ataggttttt aaataataaa caatctcttg ccaaaaacct
     3781 tttttgttat tgctgcatag aaccaacaag ctcattaaca ggcttggtaa tgccaccaag
     3841 gcaacaacct tagacaatgg catgttaaaa gccaatgcgg ttgtaccgag catcggaaat
     3901 cccatgcctg taattccgtg cagtattgcg gcagcaacaa aaacgataga ttgcattatt
     3961 tcttgcataa ccgtccttta tacagtaatt cttgctctaa tataatgcct gtttttatcc
     4021 gtataatcag ttccggcatg caagccattg acattgtcaa taataatcaa accatcatct
     4081 tgtgcagaaa attcttgaat atcactcgca ttttttataa tctttacaag ataatcaagt
     4141 gcaagtacca tttcctttga tactttattt ctattttctt caataccttt atagatacaa
     4201 tcacttctaa atctaatcat ttgagtattg accgataaga tattacccca tctcacacct
     4261 tgttttttat caaatgatgc tggtgcttta aatggatata aattgcccgt taatgttttt
     4321 aagtgttttt taccggtttc tgttttagat aactgattga caatatctga tgaacttaaa
     4381 aatagggaat tacctccatc attggctgat tttactacat acataaccaa ataactttcc
     4441 gggttttcac taaaagatga atcactatga agtggacatt ctccaacatc ttccgagaaa
     4501 gttatatca
//
LOCUS       DAXHKG010000140         4372 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.140, whole genome shotgun sequence.
ACCESSION   DAXHKG010000140 DAXHKG010000000
VERSION     DAXHKG010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.140"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            281..1402
                     /gene="dnaJ"
                     /locus_tag="ACFMWP_001802"
     CDS             281..1402
                     /gene="dnaJ"
                     /locus_tag="ACFMWP_001802"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HFC5892359.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1598..3616
                     /locus_tag="ACFMWP_001803"
     CDS             1598..3616
                     /locus_tag="ACFMWP_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HFC5892360.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMIIFARRVLKAGR"
     gene            complement(3660..4217)
                     /gene="rfbC"
                     /locus_tag="ACFMWP_001804"
     CDS             complement(3660..4217)
                     /gene="rfbC"
                     /locus_tag="ACFMWP_001804"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC5892361.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMRKDSPTFGKWVGEILS
                     AENKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPEAEHSLIWNDPTVGIDWPLQGE
                     PNLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(4271..>4372)
                     /locus_tag="ACFMWP_001805"
     CDS             complement(4271..>4372)
                     /locus_tag="ACFMWP_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HFC5892362.1"
                     /translation="WRNGWLSDEKLEELARPMAKNQYGQYLLRLLKK"
BASE COUNT          919 a          987 c         1292 g         1174 t
ORIGIN      
        1 gataaaaaat aaaataaggg gaagtctgca gccgcatcaa atgccgtctg aacatgcgtt
       61 cgggcggcgt ttttataaca aaaacacttc atggcggttg gttttatgcc tgtctaagtt
      121 tttgtgtcgt gcatacctga agatttcaga cggcatcggt ttatgctgtc tgaaaagtgt
      181 attccgtttc agtttgtaag ctatggcagt ctgtttgtct tgtgttttgc gcaattgccc
      241 ttattttgag ccgtgatttt attttgaatt agatgaaaaa atgagtaatc aagattttta
      301 tgcgacgctg ggtgtggcaa gaacagctac cgatgatgag attaaaaaag cctaccggaa
      361 attggcaatg aaataccatc ccgaccgcaa tcctgacaat aaagaggcgg aagagaagtt
      421 taaagaagta caaaaggcgt atgaaacttt gtccgacaag gaaaagcgcg ctatgtacga
      481 ccagtatggt catgcggcgt ttgaaggcgg cggacagggg ggcttcggag ggtttggcgg
      541 atttggcggt gcgcagggtt ttgactttgg ggatattttc agccaaatgt ttggaggcgg
      601 ttcggggcgc gcccagcctg attatcaggg tgaggacgtt caagtcggta tcgaaatcac
      661 gcttgaagaa gccgcaaaag gtgtgaagaa acgcatcaat attccgactt atgaagcgtg
      721 tgatgtctgt aacggcagtg gcgcgaaacc ggggacatcc ccggaaacct gcccgacttg
      781 caaaggttcg ggtacggtgc acatccagca ggcgattttc cgtatgcagc agacttgtcc
      841 gacctgccac ggtgcgggca aacacattaa agaaccttgc gtcaaatgcc gtggcgcggg
      901 gcggaataag gcggtcaaga cggtggaagt caatattccc gccggtatcg atgacgggca
      961 gcgtatccgt ttgagcggcg aaggcgggcc gggtatgcac ggtgcgcctg ccggcgactt
     1021 gtatgtaacc gtccgcattc gggcgcataa gattttccaa cgcgacggtc tggacttgca
     1081 ttgcgaactg ccgatcagtt ttgccacggc tgctttgggc ggggagttgg aagtgccgac
     1141 cttggacgga aaggtcaagc tcaccgtccc caaagaaacc caaaccggca ggaggatgcg
     1201 cgtgaagggt aagggtgtca aatctttacg cagcagcgcg accggcgatt tgtactgcca
     1261 tattgttgtc gaaacgcctg tcaatttgac cgaccgtcaa aaagagcttt tggaagaatt
     1321 tgagcggatt tctaccggct tggaaaacca aacaccgcgc aagaaatcgt ttttagacaa
     1381 gctgcgcgat ttgtttgatt gattttaagg ttcggaaaca agcagccgta tcggggaatc
     1441 tccctgatac ggctgttttt gtttgtttaa aaatagtttt tattttcaat ggggtatggg
     1501 gcagggtggg ataactgttt ttaactgttc tttttaaaac ttgacatcat ggcgcgatgc
     1561 caacaatatg tgaacgtctg ttgtcaaagg aagaataatg aataaatctt tatccgggtc
     1621 ggtagaagaa taccgcgaac tgacgctccg aggcatgata ctcggtgcat tgatcactgt
     1681 aatttttact gcgtccaacg tttacctcgg tttgaaagtc gggctgacct ttgcctcgtc
     1741 gattccggcg gcggtgattt cgatggcggt tttaaagttt ttcaaaggca gcaatatttt
     1801 ggaaaacaac atggtgcaga cccaagcttc ggcggcgggt acgctttcga ccatcatctt
     1861 cgtcctgccc ggtttgctga tggcgggcta ctggagcggt ttcccgttct ggcagacgac
     1921 gcttttatgt attgccggcg ggattttggg ggtgattttc accattccgc tgcgttacgc
     1981 gatggtggtg aaaagcgatt tgccttatcc ggaaggtgtg gcggctgctg aaattttgaa
     2041 agtgggcggt catgaagaag gggataaccg tcagggcggc agcggcatca aagagctggc
     2101 ggccggcggt gcgttggcgg gattgatgag cttttgcgcc ggaggtctgc gcgtgattgc
     2161 cgacagcgcg agttattggt ttaaaagcgg tacggcgatt ttccagctgc cgatgggctt
     2221 ttcactggca ttgttgggcg cgggctattt ggtcggactg acgggcggta tcgccatcct
     2281 gttgggcatt tcgattgctt ggggcattgc cgtgccgtat ttctcctcac acattccgca
     2341 accttccgat atggaaatgg cggcgtttgc gatgaagctg tggaaggaga aagtgcgttt
     2401 tatcggtgcg gggactattg gcattgcggc ggtttggacg ctgttgatgc tgctcaagcc
     2461 gatggtggaa ggcatgaaga tgtcgttcaa gagttttggc ggcggtgcgc ccgctgcgga
     2521 acgcgccgaa caggatttgt cgcctaaggc tatgattttt tgggtgctgg cgatgatgtt
     2581 tgttttaggc gtgtcgtttt accactttat cggcgattcg cacattacgg gcggcatggc
     2641 ttggcttttg gtggtcgttt gcacgctttt ggcttccgtc atcggctttt tggtcgccgc
     2701 cgcctgcggt tatatggcag gtttggtcgg ctcgtcttcc agcccgattt ccggcgtggg
     2761 catcgtgtcc gtcgtcgtta tttcactggt tttgctgctg gtaggcgaat ccggaggttt
     2821 gttggcggat gaggctaacc gcaaattttt gctggcactg actttgtttt gcggctcggc
     2881 agtaatctgc gtggcttcga tttccaatga caacctgcaa gacttgaaaa ccggctacct
     2941 gctcaaagcc acgccttggc ggcagcaagt cgccctgatt atcggctgta tcgttggtgc
     3001 gctggttatt tcgcccgtgt tggaactgct ttacgaagcc tacggcttta ccggcgcaat
     3061 gccgcgcgaa ggcatggatg cggcgcaggc tttggcagcc cctcaagcga ctttgatgac
     3121 gaccatcgcg tcgggcattt tcgcccacaa ccttgaatgg gtctatatct ttaccggcat
     3181 cgcgattggc gcggtgttga ttgccgccga tttggtgttg aaaaaatcat caggcggcaa
     3241 acttgccctg cccgtccttg cggtcggtat gggtatttat ctgccgccgt ccgtcaatat
     3301 gcccatcgtg gcaggcgcgg tgttggcggc ggtgttgaaa cacatcatcg gtaaaaaagc
     3361 ggaaaaccgt gaaggccgtc tgaaaaacgc cgagcgcatc ggaaccttgt tctccgccgg
     3421 tctgattgtc ggtgaaagtc tgattggtgt gattatggcg tttattattg ccttctccgt
     3481 gaccaacggc ggctcggacg cgccgctcgc gttgaatctg caaaactggg atgccgccgc
     3541 ttcttggctg ggcttggcgt tcttcgttac cggaatgatt atttttgcac ggcgcgtact
     3601 gaaggcgggt aggtagcctg tcggagaaaa tgccgtctga aacgttcaga cggcattttt
     3661 tatcgggaaa gtgtaaggcg gagcttttcg gcttgcgccc acgttttgcc ggcaaggtct
     3721 ttgggcgaca ggttcggctc gccttgtagc ggccagtcga tgccgacggt cggatcattc
     3781 caaattagtg agtgttcggc ttcagggttg taatagtctg tgcatttata gacgaactcg
     3841 gcttcatcgc tcagtacata gaagccgtgt gcgaaacctt cgggtaccca cagttggcgt
     3901 ttgttttctg cggacagaat ctcgcctacc catttgccga aagtggggga gtctttacgc
     3961 atatcgacgg ccacgtcgaa tacttcgccg acaactacgc gtacgagttt gccttgtgtg
     4021 ttttcggttt ggtagtgcag gccgcgcaat acgcctttgc cggatttgga gtggttttcc
     4081 tgcacgaagg tgcgttcgca gacttgggtt ttaaaccact cgtcgcggaa ggtttccata
     4141 aaaaagccgc gcgcgtcgcc gaagacttgg ggctcaagca gttttacgtc aggaatggcg
     4201 gtatcaatga tgttcatctt tttatctttc atctaaaggc cgtctgaaaa gtttcagacg
     4261 gcctcaaaca ttattttttc aacaggcgca gcaaatattg gccgtattgg tttttcgcca
     4321 tcgggcgcgc caattcttcc agtttttcat cggaaagcca accgttgcgc ca
//
LOCUS       DAXHKG010000141         4369 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.141, whole genome shotgun sequence.
ACCESSION   DAXHKG010000141 DAXHKG010000000
VERSION     DAXHKG010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4369
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.141"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(35..1414)
                     /gene="norM"
                     /locus_tag="ACFMWP_001806"
     CDS             complement(35..1414)
                     /gene="norM"
                     /locus_tag="ACFMWP_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HFC5892363.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFIDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGTVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVLWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            1749..2900
                     /locus_tag="ACFMWP_001807"
     CDS             1749..2900
                     /locus_tag="ACFMWP_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HFC5892364.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGTVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTSERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            3004..4302
                     /locus_tag="ACFMWP_001808"
     CDS             3004..4302
                     /locus_tag="ACFMWP_001808"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HFC5892365.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAILAYYNVQLQHLHNAEPVKAEDVMAVIEKVALRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGWRESTFGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
BASE COUNT         1045 a         1197 c         1249 g          878 t
ORIGIN      
        1 tgttaatcca ctatattttt aatcggcgga gttttcagac agccttatgc gatctgacca
       61 tctccctact gcacaattcc aagcaccaca ccaaggcgat ggcggcgatg gtgagcgagg
      121 caatcaatgc cgtccagaag ccgtaaatgc ccatatcgaa acggtaggcg agcaggtagc
      181 ccggcagcag accgcagccc caaaaggcgg cggcgtggat gaacatcggc acctttgtaa
      241 ctttgtagcc gcgcaaggcg taggaggcga tacattgggt gaagtctgcc ggttggaaca
      301 agccggcgaa cagtaagacg gtggcggcga tgcttaaaac cgccggatca ttgttgtaca
      361 tacttaccag cggcgaacgg aataatacca aggaaagcac ggtaatcacg gcgagcatcc
      421 atcctaacac cagtgacacg cccgaaatat aacgcgcccg cgaaaattcg cgccgcccaa
      481 gcgaaaagcc gatgcgcacc gtccccgccg agccgacgct ttgcggaatc atatagagaa
      541 tccccgacaa actgatgccg acctgctgcg ccgccacata atcctcgccg aaaggcgcaa
      601 tcaaaaacac gataaacgaa aacgcgctgg cttccaaaaa ataagacagc ccgatgggtg
      661 cgccgatttt ccaaatctgt ttgaacaccg cccaatccgg tttgccgaat ttcgccgtca
      721 gtccgaatgg gcggaagaaa ttttccttgg cgatataaat ccacaatgcc agcgcgctga
      781 accacaacac tgccatcgtc gccagtccgc agcctgcgcc gcccaaagcg ggcataccga
      841 atttgccgta aacgaaaata tagttcagcg gcacgttcaa cacaaacgcc gcaaagctga
      901 ccaacataat caggcgcggg cggttcaggc tggaggcgta ggcgtgcagt gcgcggtgta
      961 ccattgccgc cggcatcgcc aagctggtga acagcatata ctgcgccatt gtgccttcca
     1021 cataatcgct caaggtcagc cagttgcgga acggcgtaat cgccgcccac atcaataccg
     1081 tgccgaacac gcccaaaaac agcccgaacc aaatcccctg ccgccccgtt tcgcccactt
     1141 cgtcggtttt acccgcgccg taaagctggg caatcatcgg gttcagcgcc gccataatgc
     1201 ccataaaggt aatataaacc gtggcaaacg cgctgctgcc caaagccacc gccgccaagt
     1261 cttccttgcc tgcaccaccc gccatcacag tatcgataaa accgatgccc acctgcgcga
     1321 cctgcgccaa cagcatgggc agggcaaggg cggtcagcag gcggacttct ttcaggaaga
     1381 cggaaaagga aaagcggttg aggtcgagca gcataagtgt tcaatcaaca aaaatgccgt
     1441 ctgaagcaga aaacggcagc aggaagtgat gagaaataat ggtgcacatt atatcgtaaa
     1501 aaaatgctgt gccgtcagac ggcggataca gggtataaaa gtatattcag attgtgtgta
     1561 ttttatggta aagtttggtt ttaacgactt gacggcattg agccgtcgga caggggctgt
     1621 tcggattctg aatcggaagg aagcatcgcc gttttgacag cggcgtgatg cgttgcggca
     1681 aagatgccgt ctgattgcgg atcgggcagc cttttgtatt tacatgataa aatagaaggc
     1741 agattctcat gcagacatgg cagcttccgg aacatatcgc cgacgtactg cccacgaacg
     1801 cgcggcagct tgaaagcgcg agggagcagt tgttggcact gttccgcgta cacggttatg
     1861 aactggtaca gcctccgctg atggagtacg cacattccct gctgacgcat atcgatgcgg
     1921 ggctttccct gaaaaccatt ttggtaacgg acaggctcag cggcaggcag ttgggcatac
     1981 gcgccgacat cacgccgcag gtggcgcgta tcgatgccca tcttttatcc gccaaccaag
     2041 ggattaatcg gttgtgttat gccggtccgg tgttgcacgc gcagcccgac ggtctgctga
     2101 atatgcgcga acccttgcag gcaggggcgg aaatgtacgg ttttgccgac atccgtggcg
     2161 acatcgagct gatagacctg atgctgaaaa gcatgaaaat tgccgatatg ggcaaagtgc
     2221 tgctttcgct ggggcatatc ggcatatttc gcgccttgtc cgatgcggcg catttggatg
     2281 cggggcagtc tgcaacgctg cttgccttga tgcaggataa agataccggg acggtcgaag
     2341 cgcaggtcaa ggcttggaag ctggacggca tgtgggcaaa agcattctcg ctgctgccgc
     2401 gcctgtacgg cgggcgtgaa gtgttgtccg acgcgcgcgg acggttgccg gatttgtcgg
     2461 cggtcggcgg cgcgttagac gaattgcagg cggtgtgcga cgcattcccc gattgtgaaa
     2521 tccatatcga cttgtccgag ctgcgtgtcg acaattacca cacgggcttg ctgtatgccg
     2581 cctatgccgc cgatttccac gacgcggtcg cgcgcggcgg gcgttatgac ggattgggcg
     2641 gatatttcgg cagggcgcgc ccggcaacgg gattcagttt cgacttgcgc agctttatcg
     2701 ggcgtttgcc caccagcgaa cggcagcccg ccgtgttggt cgatgcggaa gatgccgaag
     2761 cggcgcgcga agcagtcgaa gccttgcgtg aacaagggca gtgtgtcgtg attgactacg
     2821 gtatcggaca caatgtttcg gaagagcttg caggccgtct gaaaaagacg gacggcgttt
     2881 ggcaggtcgt gaaacgctaa atacccgttc atggcggatg aaaggcaaat cgtggtgggg
     2941 cgcaaagccg caccggtttg gggatttccg caataatttt taatatcgat aggttatatg
     3001 gctatggcta aaaatgttgt agtaatcggc gcacagtggg gcgacgaggg taaaggtaaa
     3061 atcgttgact ggctggcgga agaagccggc ggcgtggtgc gcttccaagg cggccacaat
     3121 gcgggtcata ctttggtcgt cggcggcaaa aaaaccattt tgcgcctgat tccgagcggc
     3181 atcctgcatg aaagtctgga ctgcttcatc ggttcgggcg ttgtcgtctc ccccgaagcc
     3241 ctgttgggcg aaatcgacga gttaaacgct gcaggcgtga aaaacgtcga aggccgtctg
     3301 aaaatcgcgc cgacctgccc gctgatcctg ccttaccaca tcgcgctcga ccaagcccgc
     3361 gaagcatcgc gcggcaaagg caaaatcggc acgaccggcc gcggcatcgg ccctgcctac
     3421 gaagacaaag tggcacgccg cgccattcgc gccgccgatt tgctgcatcc tgaaaaactg
     3481 cgtgaaaaac tggatgccat ccttgcctat tacaatgtcc aactgcaaca tctgcacaat
     3541 gccgagccgg ttaaagcgga agacgtgatg gcggttatcg aaaaagtcgc gctgcgcatt
     3601 gcgccgatga ttaccgacgt gtcccgcgtg ttgaacgaga aaaacaaaaa cggcgaaaaa
     3661 ctgctgtttg aaggcgcgca aggtgcgttg ttggacatcg actacggcac ttatcccttc
     3721 gttacctcgt ccaactgtct ggcgggagcc gcttccgcag gcgcgggcgt aggccctcaa
     3781 atgctggatt atgttttggg catcgtcaaa gcctatacca cgcgcgtcgg ttcaggcccg
     3841 ttcccgaccg aattgttcga cgaagtaggc gcaggtttgg cggaacgcgg acacgaattc
     3901 ggctcggtaa ccggccgcgc acgccgctgc ggctggtttg atgccgccgc cctgaaacgc
     3961 tccatccaaa tcaacggcat ttccggtatg tgcattacca aactcgatgt aatggacggc
     4021 gttgaaacca tcaatatctg cgtcggctac gaattgcccg acggcggcaa aaccgatatc
     4081 ctgccttgcg gttccgatgc ggtggaaacc tgcaagccga tttacgaaac catgcccggc
     4141 tggcgtgaat ccactttcgg cgtgaaaagc tacgacgcat tacctgccaa tgccaaagca
     4201 tatttgaaac ggattgaaga agtctgcggt gcgccggtcg ccatcgtctc caccggcccc
     4261 gaccgagaag aaacgattgt gctgcatcat ccgttcgcat aaggttttgc agtaaaaatg
     4321 ccgtctgaag cccctccgag ttcagacggc atttttgctg ccgttttat
//
LOCUS       DAXHKG010000142         4294 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.142, whole genome shotgun sequence.
ACCESSION   DAXHKG010000142 DAXHKG010000000
VERSION     DAXHKG010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.142"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(60..1316)
                     /locus_tag="ACFMWP_001809"
     CDS             complement(60..1316)
                     /locus_tag="ACFMWP_001809"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HFC5892366.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQSLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
     gene            complement(1352..2209)
                     /locus_tag="ACFMWP_001810"
     CDS             complement(1352..2209)
                     /locus_tag="ACFMWP_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HFC5892367.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPQSFHAFEPPLNPYGWRGIYIQD
                     WAEYGFERQEVRYHLLDRMAYLAPARAAETETLNETEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(2270..3085)
                     /locus_tag="ACFMWP_001811"
     CDS             complement(2270..3085)
                     /locus_tag="ACFMWP_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFC5892368.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            3149..3319
                     /locus_tag="ACFMWP_001812"
     CDS             3149..3319
                     /locus_tag="ACFMWP_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892369.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            3329..4114
                     /locus_tag="ACFMWP_001813"
     CDS             3329..4114
                     /locus_tag="ACFMWP_001813"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC5892370.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
     gene            complement(4095..>4294)
                     /locus_tag="ACFMWP_001814"
     CDS             complement(4095..>4294)
                     /locus_tag="ACFMWP_001814"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892371.1"
                     /translation="IVQGSPFNQIWVSIFGSFGHLAVSTFLPPLPVKMPSEISARYFR
                     RHTRPFSRIPGSGLKFKRVRK"
BASE COUNT          883 a         1050 c         1304 g         1057 t
ORIGIN      
        1 gatgaaatgc cgtctgaacg ctttgaaaag ggttcagacg gcattttgtt taaacagggt
       61 tatttgcgtt gcaatacggc ggcgaagaag ccgtcggttt ggtgttttgc cgaatcgagg
      121 cgcaggtatt tgccggtatc caaatcgatt ttcaggcttt gcagaagttc ggcgcagttg
      181 acgggttcaa attcgggatg ttcggacagg aaacgttcga cttgcagctc gttttcttcg
      241 ggcaggatgc tgcaagtggc gtaaaccaag cggccttgcg gttttaccag tttggaggca
      301 gcatcgagga tgctgtgttg ctgttccaaa aggttggcca cggtctcggc agattggcgg
      361 tatttgaggt cgggattgcg gcgtaaagta cccaaaccgg agcagggcgc gtccaccaac
      421 acacggtcgg ctttgcctgc cagtcgggcg atacggctgt cgtgttcgct gctgatgcgt
      481 tcggggtgga tattggtcag tccggcgcgg gtcatacgcg gtttgaggtt ggcaaggcgt
      541 ttttcggcga tgtcgaaggc gtagattctg cctttattgg ccatttgcgc accgacagcc
      601 aaggttttgc cgccggcacc ggcacagaaa tcgacaatga tttcgccgcg ttttgcgccc
      661 accaataaag caagcagctg gctgccttcg tcttggactt ccagtgtgcc gtctaaaaac
      721 agttcgtgtt tgttaagcgc gattttgttt ttcaggcgga tgccccaagg cgaataaggc
      781 gttgcctctg catcggcact ttcggcttgc aacagcggca gcactttatc gcgtttgcct
      841 ttcaaagtgt tgacgcggat gtcgagcggc gcggcttggt tgatgctgcg tccgaaggcg
      901 aggatttctt cttcgttcca atgctgttgc agttgttcga ccagccattg cggcaattct
      961 gcggcggtat tcagaccgtc tgaaaactcg gttttgcggg ctttcaaatt gccgaggaac
     1021 tctgtttctt cttcatcaag caggtctttg atttggctga tgttggtgct tctgccgaga
     1081 accagtgcgg cgagtgcggc tttgcgtggc tgcgcgtgag gacggcgcag ggcagtgctg
     1141 attttttgat agtggcgcag cgcggcaaag gcggtttcgg cgatttcgtg gcggtcttgg
     1201 cggccgagct ttttatgttc gcggaagtag gcggagagga cggcatcgga aggctgtttg
     1261 aaagtcagca tttcagccaa aactttggcg gtatggtcga gttgtgcggc gttcataatg
     1321 taatgggttc tcttaaagtt ggcaaagggt ttcagacggc cttcataatg cgttcgattt
     1381 cgtgccaaaa gccgtccggc cgacattcca aaacggcaat caagccttgg tcgatacggc
     1441 ggatttcggt ttcgttcaat gtttcggttt cggcggcacg cgcaggtgcg aggtaggcca
     1501 tgcggtcgag cagatggtag cggacttctt ggcgttcaaa cccgtattcc gcccagtctt
     1561 gaatatagat gccgcgccag ccgtatgggt taagcggcgg ctcaaaagca tggaaacttt
     1621 gtggaaaaaa tccgatgccg cgcacgatgg aaacgggttt tacgtcaagc ggcagaccgt
     1681 gttgccgcaa ggttcggatg ccgtctgaag tgtgcggcag accgagttgg gcggtcagtt
     1741 tggcggcttt tcccaacagc gtgtctttgg ggtcgagtcc gcgcatgtct tcgagcctgc
     1801 ccgtgccgcc gccgtaatat ttgcaggtca gctcgatatg gtagggcttg ccgttaagcc
     1861 ttaccacaaa atccgccgcg ccttgcgtat tgccgtccga accggaaacc gtgaggttgt
     1921 gcgcgagcag ttcggcgtgt ggcgcgttgg caaaccaaaa tgccagcagt tcttcggcgt
     1981 aaatgcccaa gcggtgtccg aacggggcgc gtcgggtgag gtgttccgtc agcggcgcgg
     2041 gatcggcatc caatgccaaa agatagcgga aaccgcgttc ccccaatagt tcgcgcacgc
     2101 ccaattcgca accgctttgc cacaaaggcg gcgcagtcag cagcgaggcg aggtcgcgga
     2161 cgggttggct ggtgagcttc caccataatg cgtctagggc gtaattcatg cttatccgaa
     2221 tatcagtcat gccgtctgaa aagctggaaa tgttttcaga cggccttaat cagtcttttt
     2281 tatggatacg atggctgacg gtattgaaaa aaccgcgcag gatatcgatg tcttcggttt
     2341 gcgtgttggc gcgtccgaac aggctctgca tacggcgcat cagacgctcg ccgttgcggc
     2401 ggttgaaaaa gccgatgtcg ttcatcacgc tttccatgtg ggcgaccatg cctttgattt
     2461 gctcgtgggt cgcagcgtgg tcttcttgtt gaagatgggt catgggcgaa ccggtttggc
     2521 tgaagatttc gtagcacacg acctgcacgg cttgggcgag gttgagcgag aaatagtcgg
     2581 gattgccgtt gatggtcatc agtcggttgc aggcttggac ttcttcgatg ctcaagccga
     2641 aagtctcgtt gccgaaaacc agtgccactt tctcgcctcg gtttgcggtc tgcagtaatt
     2701 cggataccaa atcgcgcggg gtttgcagcg gcgcagtaat ttcgcggcgg cggctggtca
     2761 gggcgcaggc gatggtggtg tcggcaaggg cttcgtccaa agaagcggca atggtggcat
     2821 tttccaaaac gtctgccgcg ccggaagcga ggatgaagct ttcttccggt aatttaaacg
     2881 attgaggatg ctccgggtca aacacgggcg ggttttccgt catcggcgtt gccatcagat
     2941 ttggggcgac gatggtcagt ttgtgcagac ccattgtttt catcgcgcgc gcggcagagc
     3001 cgatgttggc gggatggctg gtgcgcgtga ggatgatgcg gatgttgtcc agataagcgg
     3061 gcagggcggg tttgagagta gtcatgttcg gttttcggtc ggaatggaat agggtataat
     3121 gcgccgtctt tttcgttcgg acggtcaaat gccgtctgaa atgttcttta acaacgtcgg
     3181 aaatttaacg ttgcgcctga agcagacacg cgtcgggcgg tattttaccc gatttggcag
     3241 gatttacccc aaccaaataa actccgattt tgccgctccg aaggactgcg cgtccgaacc
     3301 ggcggtatgc cacccttaag gaaatctgat gaatccgttt ttgaatacag cctttaaagc
     3361 cgcccgccgt gccggtcaga tgatgatacg cgccgcgggc aatctcgatg ccgtcaaaac
     3421 cgacagcaaa gcattcaacg attttgtttc cgatgttgac cgcaattccg aaatcatcct
     3481 ggttgaggct ttgaaagaag cctatccgca ccacaaaatc acttgcgaag aaagcggctc
     3541 ccacggtaaa gccgcagccg aatacgaatg gattatcgat ccgctcgacg gcacgaccaa
     3601 cttccttcac ggccatcccc aatacgccat ctctatggca ctcctgcaca aaggcgtgtt
     3661 gcaagaagct ttggtgtacg cccccgaacg caacgacgtt tacatggctt cgcgcggcaa
     3721 aggcgcgttg ctcaatgacc gccgcatccg cgtttccaac cgcatcgaat tgaaccgctg
     3781 cctgatcggt accggctttc ctgttgtcga tcaaagcatg atggacaagt atctggcgat
     3841 tttgaaagat ttcttggcaa aaaccgccgg cggccgtcgt gaaggcgcgg cttctttgga
     3901 tttgtgtgct gtggcgactg gtcgttttga cggctttttc gagttcaacc tcaaaccttg
     3961 ggatattgcc gcaggcgcat tgattgttca ggaagcgggc ggtatcgtaa ccgatatgac
     4021 gggtgaagac ggctggctgg aaagcggcga tattgttgcc gccaatccca aagtgctggc
     4081 gcaaatgtta aaaatcattt ccgcacacgt ttaaatttca gcccgctccc gggaatgcgg
     4141 gaaaacgggc gggtatgccg tctgaagtat cgcgccgata tttcagacgg catttttact
     4201 ggcagcgggg gcaggaaggt ggaaacggct aaatgcccga aactgccgaa gatggaaacc
     4261 catatctgat taaacggaga accctgtacg attt
//
LOCUS       DAXHKG010000143         4210 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.143, whole genome shotgun sequence.
ACCESSION   DAXHKG010000143 DAXHKG010000000
VERSION     DAXHKG010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4210
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.143"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(83..1129)
                     /gene="recA"
                     /locus_tag="ACFMWP_001815"
     CDS             complement(83..1129)
                     /gene="recA"
                     /locus_tag="ACFMWP_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HFC5892372.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGIEMHIT
                     EGTQDETDGERPEE"
     gene            1383..2147
                     /gene="aroD"
                     /locus_tag="ACFMWP_001816"
     CDS             1383..2147
                     /gene="aroD"
                     /locus_tag="ACFMWP_001816"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HFC5892373.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEILHHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFKLL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2167..4182
                     /gene="rep"
                     /locus_tag="ACFMWP_001817"
     CDS             2167..4182
                     /gene="rep"
                     /locus_tag="ACFMWP_001817"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HFC5892374.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVSDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGNPSD"
BASE COUNT         1003 a         1148 c         1150 g          909 t
ORIGIN      
        1 aaactcaaat caagccgttc ggaggctgct caaaaaaaac ggtacttcgc aacagaagta
       61 ccgtttatcg ggatttcagg ttttattctt cggggcgttc gccgtcggtt tcgtcctgcg
      121 tcccttcggt gatgtgcatt tctatgccgt tgagggcgcg gatttttgcg tcgatttcgt
      181 cggcaatttc gggattttcc ttcagccaga cgcggacgtt gtctttgccc tgaccgattt
      241 tcgcgccgtt gtagctgtac cacgcgccgg atttgttgat gatgtcgttt ttcacgccga
      301 tgtcgatcaa ttcgccttcc caactgatgc cttctccgta gaggatgtca aactctgcct
      361 gacggaacgg cggcgcgact ttgtttttga tgactttgac gcgggtttcg ttgcccaata
      421 cttcttcacc ttttttgatg gatccggtgc ggcggatgtc gaggcggacg gaagaataga
      481 atttcagcgc gttgccgccg gtcgtggtct cggggctgcc gaacattacg ccgatcttca
      541 tccggatttg gttgatgaac acaaccagcg tgttggtttt tttgatgtgt ccggtcagtt
      601 tgcgcaaagc ctggctcatc aggcgcgcct gcagtccgac atggctgtcc cccatatcgc
      661 cttcgatttc ggctttgggg acgagtgcgg ctacggaatc gacgactacc atatctatgc
      721 cgcccgaacg gacgagtgtg tcgcagattt ccaaagcctg ttcgccggta tcgggctggg
      781 acaggtaaag ctcttcgact tttacgccga gtttgcgggc gtaaacggga tcgaaggcgt
      841 gttcggcatc gacaaaggcg cacacgccgc cgtttttctg gcattgggcg acggcttcga
      901 ggcagagggt ggttttgccg gaggattctg ggccgaagat ttcgacgatg cgcccgcgcg
      961 gcagaccgcc gactccgagg gcgaggtcta atccgagcga tccggtggaa atgacttcga
     1021 ggttttcttc ctgctggctg ccgtccattt tcatgatggc gcctttgccg aaactttttt
     1081 cgatttgcgc cagtgcggcg gcaagtgctt tgcttttgtc gtctgacatt ggggttactc
     1141 cggaacaaat gcggtatgtg ggatgcggcg caacacgggc tgcggcgcgg gatgtgtatc
     1201 gttttcccga tgtgcgggct atcggtaatg ctgcttcacg aggttgccat tatcgcatat
     1261 ttccttgctt gccgatatgc gccaggacgc ggcggcttgt gccggaatgg aatctggatg
     1321 ccgtctaaaa ggcggccggc tttgttataa tggcggctgt tttttctgtg tgtgcctgtt
     1381 ttatgtgttc ctgccttgtt gtcaaaaata ccgttatcgg aagcggacgc accaaaatcg
     1441 ccgtgccgct tgtcgcccgc gatgccgccg aactttccgc cgtacttgag caaatcaaaa
     1501 atatgccctt cgatattgcg gagttccgcg ccgacttttt ggaatgcgcg ggcagtatcg
     1561 gcgaaatatt gcaccacacg cagaccgtcc gcgacgcgct gcccgacaag ccgctgctgt
     1621 ttacgttcag acggcatggc gaaggcggct cgttcccgtg ttcggacgat tattatttta
     1681 aactgctcga cgcgctgatc gaaagtcgcc tgcccgacat tatcgatatc gagctgtttt
     1741 ccggcgaaac cgccgtccgg cgcgctgtgg cgaatgctca aaaaaacggc atcgccgccc
     1801 tgctctgcaa tcatgagttt caccgcacgc cgccgcaaga agaaatcgta tgccgtctga
     1861 aacagatgga ggactgcggc gcggacatct gcaaaattgc ggtgatgccg caaagcgcgg
     1921 aagatgtgct gactttgctt tccgccacgc tcaaagcgaa agagcttgcc gccaaaccga
     1981 ttgttacgat gtcgatgggg cagacggggg cggtcagccg gcttgccgga caggtgttcg
     2041 gctcaagcat cacgttcggt tcgggaacgc aaaactccgc gccggggcaa atcggcgtat
     2101 ccgccctccg tgcgacactc gactgcctcg aaaacggcgc agactgattt cagacagcat
     2161 caaaacatga tgaaactcaa tccccaacag ctcgaagccg tccgctacct cggcggccca
     2221 ctgctcgtcc ttgccggtgc aggcagcggc aaaaccggcg tgattactca aaaaatcaag
     2281 tatttgattg tcaatgtcgg ctatctgccg cataccgttg ccgcgattac ctttaccaat
     2341 aaagccgccg cggaaatgca ggagcgcgtc gccaaaatgc tgcacaaatc gcaaacgcgc
     2401 gggctgacga tttgcacgtt ccactctttg ggcatgaaga ttctgcgcga agaggcgaac
     2461 catatcggtt acaaaaaaaa cttctccatt ctcgattcta ccgacagcgc gaaaatcatc
     2521 ggcgaactct taggcggtac gggcaaagaa gccgtattca aggcgcagca ccagatttcc
     2581 ttgtggaaaa acgatttaaa aacgcctgaa gatgtcgttc agacggcatc gaacatttgg
     2641 gaacaacaaa ccgcacgcgt gtatgcgagc tatcaggaaa ccttacaaag ctatcaggca
     2701 gtggacttcg acgacttgat ccgcctgcct gccgtgctgt tgcagcaaaa cagcgaagtg
     2761 cgcaacaaat ggcagcggcg gctgcgttat ctgctggttg acgaatgcca agatacgaat
     2821 acctgccaat ttacgttgat gaaacttctg accggcgcag aaggtatgtt taccgccgtc
     2881 ggcgacgacg accagtccat ctacgcatgg cgcggcgcga acatggaaaa cctgcgcaaa
     2941 atgcaggaaa actatccgca gatgaaggtc atcaaactgg agcaaaacta ccgctccacc
     3001 gcgcggattc tcaaaatcgc caacaaagtc atcgagaaca accccaagct gttcaccaaa
     3061 aaactttggt cgaaattggg cgaaggcgag cccgtcaaag tcgttgcctg ccaaaacgag
     3121 cagcacgaag ccgactgggt cgtcagccaa atcgtcaaac aaaaactcat cggcggcgac
     3181 aaaacccaat atgccgattt cgccgtgttg taccgcggaa agcatcaggc gaggattttc
     3241 gaggaagcat tgcgcggcgc gcgcatcccc taccgtctct ccggcggaca aagctttttc
     3301 gacaaagccg aaatcaaaga cgtgttgtct tatgtgcggc tgcttgccaa ccccaatgac
     3361 gatcccgcct ttctgcgtgc cgttaccacg cccaaacgcg gcatcggcga tgtcacgctg
     3421 ggcaagctca acacttacgc gcacgaacac gaatgcagcc tgtatgaagc cgcacaaaac
     3481 gaagaagccc ttgccacgct gaacaatacc aaccgccaac acctgcaagc ctttatggat
     3541 atgttcggca gctaccgcgc caaagcggaa accggcgaag caggcgagtt catcaacagc
     3601 ctgctcgaag aaatcgacta tgaaaaccat ttgatgcaaa acgaagaagg caaggccggc
     3661 gaaatcaaat ggcgcaatgt cagcgatttg gtatcatggt ttgcgcgaaa aggcggggaa
     3721 gacggcaaaa acatcatcga actcgcccaa accgtcgcct tgatgacgct tttggaagga
     3781 aaagacgaag aagaaaccga tgccgtctcg ctatccacgc tacacgccgc caaaggtttg
     3841 gagtatccgt atgttttcct tgtcggttgc gaagaaggcg ttttgccgca caacgacagt
     3901 atcgaagagg gcaacgtcga agaagaacgc cgcctgatgt acgtcggcat cacccgcgcc
     3961 aaacgccaac tcacgctgac ccactgcgtc aaacgcaaaa aacaaggcac atggcagttc
     4021 cccgaaccca gccgattcat agacgaaatg ccgcaggaag atttgaaaat cctggggcgc
     4081 aaaggcggcg agccgattgt cagcaaggaa gaaggcagac gcaaccttgc cgatataatc
     4141 ggaaggctcg acagcatgaa aaaaggcaat ccgtcggatt aaaccaagat agggaaacga
     4201 agccggagac
//
LOCUS       DAXHKG010000144         4192 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.144, whole genome shotgun sequence.
ACCESSION   DAXHKG010000144 DAXHKG010000000
VERSION     DAXHKG010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.144"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..315)
                     /locus_tag="ACFMWP_001818"
     CDS             complement(<1..315)
                     /locus_tag="ACFMWP_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HFC5892375.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLPARLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYSRIEMQSDTVLQAGIWRGTSCPT
                     ARS"
     gene            511..1237
                     /locus_tag="ACFMWP_001819"
                     /pseudo
     CDS             511..1237
                     /locus_tag="ACFMWP_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            1306..2844
                     /gene="lnt"
                     /locus_tag="ACFMWP_001820"
     CDS             1306..2844
                     /gene="lnt"
                     /locus_tag="ACFMWP_001820"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HFC5892376.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3108..3971
                     /gene="rpoH"
                     /locus_tag="ACFMWP_001821"
     CDS             3108..3971
                     /gene="rpoH"
                     /locus_tag="ACFMWP_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HFC5892377.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
BASE COUNT         1020 a         1295 c          967 g          910 t
ORIGIN      
        1 cgaccttgcc gtcgggcagg atgtaccacg ccaaatcccc gcctgaagca cggtgtcgga
       61 ctgcatttcg attcggctat acgccttttc acgcaggctg taattgaatt tccacaaacc
      121 gccgaacact gccggcggac gcgcgaccag catcaggaac gccgcaatcg ccaaggcttc
      181 cgccgccccg tccaacacgc cggcgggaga aaccagcagc aaaggcattc ccaaacgtgc
      241 gggtaaagtg gtcgaaacca cgctcagaaa caacagtgcg ccacccggca ggaacagact
      301 gcccatccaa tccacgctaa cgattctccc ttaaaattca ttaaattaaa atcgaaagac
      361 tgtaacacgg cattttcttt tcacgaaact ttacttcacg tccgccacag cgttcagacg
      421 gcattttcct gtttcatgcc gcctgaaacc gcccaaatcc gcgttctcct atataatgtc
      481 ggactttgcg ccgcatttca ggattcttta atggcatttg cctcactatt taccctgccg
      541 gacgacatca ccgccgtttt ggacgatgtt gccctgatga ccaaagccgc cgcaaagaaa
      601 accgccggcg tggtcggcga cgatttggca cccaatgcca accgtgttac gggcgtatcg
      661 gcagaacgcg agttgccgat tgtttggtcg atggcgaaag gttctttttc caacaagccg
      721 gttttggtgc ctgcggccct gctgctttcc gccttcctgc cgcaactcat tacgccgctt
      781 ttgacggcag gcggcattta tctgtgcttt gaaggcgtag aaaagctgct gcacaagttt
      841 ctgcaccgac atgacgcgca tgctcgtaat ggcggcaatc ggcatcggca tgactgtttt
      901 ggtgtacgga atcgttgccg tcatcgtcaa actcgacgac ttaggcatgc tgctgatgcg
      961 ccgcccacaa accttttcgc gcagtttggg gcaaatgctg actgccttta tgccttgctt
     1021 tatgcgcggt ttgagcgtgg tcggcacgct tgccatgttt cttatcggcg gcgtactggt
     1081 cgcccacaac ctcggccttc tgcacgattt cctgcacgcg caacactggg acgctggctg
     1141 ggcggagtac ttcgccaacc tcgttgtcgg gctgctttcc ggttcgattg cctgcgcccc
     1201 cgccttgccg ctgatgaatc gtttcggcag gcattgattt ctttttcaaa taccgatgcc
     1261 gtttgaaaga tgttcagacg gtatcttccg aacagacaga tgaatatggt ttccaaactg
     1321 gacaaatact ggcagcaccc cgccctctac tggcctttgc tcatcctttt tgccgccgcc
     1381 acccccttta ccttcgcacc ctactaccac ttttggctga tgcccttgat tttcggtgcc
     1441 ttcgtccgcc tcatcgaact gcgtccgcgt tttgctgtct cttccgccta cctgttcggc
     1501 ctgaccgcat acacgacaca gttctactgg atacacaccg ccctgcacga cgtttccggc
     1561 ctgcccgacc tctatgccgt accgctgacc ttcctactcc ccgcctacct tgccctttat
     1621 ccggcactgt gtttctggct gtggaaaaaa tttaccctgc ctcggggcat aaaaatcggt
     1681 ttggtactgc ccatcctgtg gacactgacc gagtttgccc gcgaacgttt cctgaccgga
     1741 ttcggctggg gcgcaatcgg ctactcccaa atcaccccgg acagcccgct cgccggcttt
     1801 gccccattgg gcggcatcca catggttaca ctggcaaccg cctttctcgg tgtctggctg
     1861 gttttggcga gtgataacac cgcacgttcg ggcaaacgcc tgcttccaat tatcctgatt
     1921 gccgccctgc ttgccgcagg ctacaccgcc cgacaaaccg acttcacccg ccccgacggc
     1981 agccgcagca ccgtcgccct gcttcaaggc aacatcgacc aaaccctcaa atggcgtgaa
     2041 gaccaagtca tcccgaccat acagaaatat tacgaacagg tcggcaaaac cactgccgac
     2101 atcgtcatcc tgcccgaaac cgccatcccc gttatgcgcc aaaacctgcc ggaaaacata
     2161 ctggcaaaat ttgccgaaca ggcgcaaaac aacggcagcg cgctcgccgt cggcatcagc
     2221 caatacactt cggacggcaa cggttacgaa aacgccgtca tcaacctgac cggttatcag
     2281 gaaaacaatc aggacggcat cccctactac gccaaaaacc acctcgtccc cttcggcgaa
     2341 tacaaaccgc tgcccttcct gaccacgccg ctttacaaaa tgatgaatat gcccctttcc
     2401 gacttccgca aaggcggcgg taagcaatcc gccctgctga tgaaaaacca aaaaatcgcc
     2461 ttcaacatct gttacgaaga cggattcggc gacgaactga ttgccgccgc caaagatgcc
     2521 acactgcttg ccaatgccag caatatggcg tggtacggaa aatccaacgc catgtaccag
     2581 cacctccaac aatcgcaggc gcgggctatg gaactcggac gctatatggt ccgtgccacc
     2641 aacaccggcg caaccgccat catctccccc aaaggcaaca tcatcgccca agcccaaccc
     2701 gatacggaaa ccgtattgga aggacacatc aaaggctatg tcggcgaaac gccctatatg
     2761 aaaaccggca gttcatggtg gttgatgggc atattgaccc tagccgcact gattcttttc
     2821 atcttccgaa acaaagaaca ctgatacctg cacagcccgt ccggacgggc tgtctttttt
     2881 caaaacggct atttacatac aattacgtat gtaatataat tctgaaatcg aattgagcca
     2941 tcaggtttac aaaatcaatc aaacctgcct tacaaaattt tcctgtcttt caaaccttag
     3001 cgcatatctc ctgccaaaca tacaaaatac aagccaagca gtgatatact gcatcccaac
     3061 acagcaaacc gccgatacgc agtttcagcc gaaaggaaat gccccaaatg aataacgctt
     3121 tcgcattacc cgccatccaa agcggcaacg gcagcctcga acaatacatc cacaccgtca
     3181 acagcatccc gatgctgtcc caggaagaag aaacccgcct cgccgaacgc cggataaagg
     3241 gcgacctcaa cgccgccaaa caactcatcc tgtcccacct gcgcgtcgtc gtttccatcg
     3301 cgcgcggcta tgacggctac gggctgaatc aggcagacct gattcaggaa ggcaatatcg
     3361 gactgatgaa ggcggtcaaa cgctacgagc ccggtagagg cgcgcgtctg ttttcatttg
     3421 ccgtacactg gattaaagcc gaaatccacg agtttatttt gagaaactgg cgtttggttc
     3481 gcgttgccac caccaaaccg caacgcaagc tgtttttcaa tttacgcagt atgcgtaaaa
     3541 acctcaacgc cctgtctccc aaagaggcac aagacatcgc cgacgatttg ggtgtcaaac
     3601 tttccgaagt tctggaaatg gaacagcgca tgacgggaca cgacatcgcc atcatggcag
     3661 acaacagcga cgacgaggac agtttcgccc ccatcgactg gcttgccgac cacgattccg
     3721 aaccgagccg gcaactatcg aaacaggcgc attacgccct gcaaacagaa ggtttacaaa
     3781 acgctttggc gcaactggat gacaggagcc gccgtattgt ggaaagccgc tggcttcaag
     3841 acgacggcgg gctgacgctg caccagcttg ctgcagaata cggcgtctct gccgagcgca
     3901 tccgccagat tgaagcaaaa gccatgcaga aactgcgtgg tttcctgacc gaagaagccg
     3961 aagcggtttg aaatatacgc aataaaatac ccgacaaatt gttttgtcgg gtattttatt
     4021 tggtaaacat caatgcggtt tgtgcgtcgt gctgtacacg attttatccg tccacgccgt
     4081 tgcaattgcc gaaatcaaaa agcagacatg caccagacac tgccgcatca gctgcttttc
     4141 cgacagattg gcggaattga tatagtggat taacaaaaat caggacaagg cg
//
LOCUS       DAXHKG010000145         4148 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.145, whole genome shotgun sequence.
ACCESSION   DAXHKG010000145 DAXHKG010000000
VERSION     DAXHKG010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4148
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.145"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..108
                     /locus_tag="ACFMWP_001822"
     CDS             <1..108
                     /locus_tag="ACFMWP_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892378.1"
                     /translation="KYNGIDRKSFPLFLKECEFRFNFGTPSQQLKILQK"
     gene            1029..1607
                     /locus_tag="ACFMWP_001823"
     CDS             1029..1607
                     /locus_tag="ACFMWP_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC5892379.1"
                     /translation="MHYNPVAYGKIKVQSWKERRDFNIVKQDLDFSCGAASVATLLNN
                     FYGQKLTEEDVLKKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVY
                     LKYRKDDHFSVLRGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPK
                     GRDAGGDKAFFTRSPKRQTEFAVGQVKWWRAY"
     gene            1737..3398
                     /locus_tag="ACFMWP_001824"
     CDS             1737..3398
                     /locus_tag="ACFMWP_001824"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HFC5892380.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHKDGSVKGIATGNM
                     GVGKNGEPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGFQSLPKLSFKGGVLVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVENFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGSPRLQINAANCVHCKTCDIKDPTQNITWICPESASGPNYGGM"
     gene            complement(3532..4026)
                     /locus_tag="ACFMWP_001825"
     CDS             complement(3532..4026)
                     /locus_tag="ACFMWP_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HFC5892381.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(4023..>4148)
                     /locus_tag="ACFMWP_001826"
     CDS             complement(4023..>4148)
                     /locus_tag="ACFMWP_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC5892382.1"
                     /translation="AGMAGLSGQISLTVPVLLTAQVLWVIIPLVLAAGIFRKRQI"
BASE COUNT         1047 a         1023 c         1103 g          975 t
ORIGIN      
        1 aaatacaacg gaatcgatcg taaatctttc ccgctgttct tgaaagaatg cgaatttcga
       61 tttaacttcg gcacaccgtc tcaacagctt aaaatcctgc aaaaatgatg tggaatttag
      121 ggctaatcta gtacagcccc ttagatttaa ttcactatac ctgcgtaatg gtatcgggta
      181 ctcatcatca acctgccttg cattcggttg tgttgtccgg caactgtccg gttgtgtcga
      241 tgggttgccc tgccgctccc tgtgctacgc aacggttgtg tgccttgggt gggcgcgggt
      301 ggcggccggg cggtttgttg ctatgatacg ggagttccga tatacaaggg tgggcttcag
      361 cccaccaatc aacgaccgaa aaagaaaaaa cgttgggctg aagcccactc tacgcaatta
      421 cgcaactgtt atcgtgggga tgacgggatt ttaggttttt gtttttctgt ttttgcggga
      481 aggatgggtt ttaggttgcg gtcatttatc ggaaaagcag aaatcgctcc gccgtcattc
      541 ccgcgaaagc gggaatctga acacgtccgt agggaaacct atatcccgtc attcccacga
      601 aagtgggaat ctagaacctc tgaattttca gacaaccttt gaatattgcc gccgtcccgc
      661 gttctagatt cccgcctgcg cgggaatgac gattcatcag tttcccgaaa cgcccgaaaa
      721 accgaaaccg agcaaaccgg attcccgcct gcgcgggaat gacgatttat aagtttcccg
      781 aaacgcccaa aaaaaccgaa atccgacagg cgggattttt gctttcgtgg ggatgacggg
      841 attttaagtt acggtcattt atcggaaaag tagaaatcgc tccgccgtca ttccagcgaa
      901 ggcgggaatc tgaacacgtc cgcacggaaa cctatagtgg attaacaaaa atcaggacaa
      961 ggcgacgaaa ccgcagacag tacagatagt acggcaaggc gaggtaacgc cgtactggtt
     1021 taaatttaat ccactataat cctgttgctt atggaaaaat caaagtgcag agttggaaag
     1081 agaggcggga tttcaatatt gtaaagcagg atttggattt ttcctgtggg gcggcttcgg
     1141 tggcgacgct tttgaacaat ttttacgggc aaaagctgac ggaagaggac gtgttaaaaa
     1201 aactggataa ggagcagatg cccgcgtcgt ttgaggatat gcggcgcatt atgcctgatt
     1261 tgggttttga agcgaaaggc tatgccctgt ctttcgagca gcttgcacag ttgcaaatcc
     1321 ccgtcatcgt gtatctgaaa taccgcaagg atgatcattt ctcggtattg cgcggtatag
     1381 acggcaatac ggttttgctt gccgacccgt cgctgggtca tgtttcaatg agcagggcgc
     1441 agtttttgga tgcttggcaa acccgtgagg gaaatttggc aggtaagatt ttggcggttg
     1501 tgccgaaagg gagggatgcc ggcggggata aggcgttttt cacacgcagt ccgaaacgtc
     1561 agacggagtt tgcggtcgga caggtaaaat ggtggcgtgc ttattgaaat ttcgacaaag
     1621 gtcgtctgaa aaccgaaaat atggttttca gacgaccttt gttgtatttg gtaactatat
     1681 gttctcgttg tataattacg gatttgcaat tcaataataa atacacagga accgccatga
     1741 cagaatccat cacccgcgac agtatgcaat acgatgtcgt gattgtcggc gcaggcccat
     1801 cgggtttgtc cgccgccatc aaactcaagc agcttgccga acaaaatggg cgcgaaatca
     1861 gcgtttgcgt ggtggagaaa ggttcggagg cgggtgcaca ttcgctggcg ggcgcggtta
     1921 tcgatccgat tgcgctgaat gagttgattc ccgactggaa agaaaaaggc gcgccgctga
     1981 cgcgtacggt aacgcaggac aaagtgttgt tcctgactga gaaaaaagcg ttcaatctgc
     2041 ctattacccc aaatttcgac aatcacggca actacatcgt cagcttgggc gaagtcgtgc
     2101 gctggttggc ggagcaggcg gaaaatttgg gcgtggaaat ttatccgggc tttgccgctg
     2161 ccgaagtgct gtatcacaaa gacggttcgg tcaaaggcat tgcaaccggc aatatgggcg
     2221 tgggcaaaaa cggcgagccg accgattcat tccagcccgg catggagctt tgggcacggc
     2281 aaaccctgtt tgccgagggc tgccgaggtt cgctttccaa acaaatcatc gaacgcttca
     2341 aactcgacca aaacagccag ccgcaaactt acggcttggg cattaaagaa gtttgggaag
     2401 tgccgtccga acagcatcag cccggtttgg tggtgcacag cgcaggctgg ccgctggaca
     2461 gcaaaaccta cggcggcgcg tttgtttacc atttcgacga caacaaagtt gccgtcggct
     2521 tcgtggtcgg tttggactat caaaatcctt atctgtcgcc gtttgaagag ttccaacgtt
     2581 tcaaaaccca tcccgaaatc cgcaaaacct ttgaaggcgg ccgccgcatt gcttacggtg
     2641 cgcgttcgct gattgaaggc ggttttcaaa gtttgccgaa gctctcgttc aaaggcggcg
     2701 ttttggtcgg cgatgcggcg ggtttcctca atatgccgcg catcaaaggc attcataccg
     2761 cgatgaaatc cgccatgctc gccgccgaag ccgtgttccc cttgttggaa aaccttgaag
     2821 aagtggaaaa cttcgacagc ggcaaagagg cggcggatta tcagcaacgt tttgaacaaa
     2881 gctggctgta tcaagagctt tacgccgcgc gcaatgtccg tccgtcattc aaatggggcg
     2941 tttacctcgg ctcaatctac accggcatcg atcagatgat tttcagaggc aaagccccgt
     3001 ggaccttgaa acatcacggc aaagacaacg agcagcttaa aaaagccgcc gcgtgcaagc
     3061 cgattgatta tccgaaaccc gacggcgtat tgaccttcga ccgcttgagc agcgtcttcc
     3121 ttgccaatct cgcgcacgaa gaaaaccagc ccgaccattt ggtgctgaac aatccgcaaa
     3181 cgatgataga cgtgaactac aaagaatacg cctcacccga aacgcgctat tgtccggccg
     3241 gcgtgtatga aatcgtcgaa gaaaacggca gcccgcgcct gcaaatcaac gcggcaaact
     3301 gcgtgcactg caaaacctgc gacatcaaag acccgacgca aaacatcact tggatttgcc
     3361 ccgaaagcgc gagcgggccg aattacggcg ggatgtaaac cttattccgc cgttacgccc
     3421 ggtcaggaat aaggaatggg gcagttgttc aaacctgccc cgtttgaacc tatgacaaaa
     3481 aatgccgtct gaaccttggc ttcaacgttc agacggcatt tttgtttgga tttacttgaa
     3541 aatataggta tcaggcatat cgtcgaaacc gacaacctta ccgcctttat cctttgcaaa
     3601 tttctcagcc tgctctttgt tgccgaacgg cagcgcgtct tccgcaccca taccgccgat
     3661 aaagccgctg tcgatgacgt aaaaggcttt tttcgcatcc atccactccg tgtcggcatt
     3721 gggattcgtc caatcggtaa cattgcccat atcggtaacg taaatcacgc ggatgccttt
     3781 gggttcttcg ggcagcttgg tatagccgaa catctgcttg atggtggaga accaaacggg
     3841 ctgatcgggt ttgccgttca agaaaatctg ggctttgggg ccgttgtgtt cggtcaggtt
     3901 catactgcaa tagtgtccga ccgaacggtc gctaatctgc cggggtaaag gcggcggccc
     3961 ctcttccgcc tgccggcagg cacttaaggc ggaaacggca acaattgcca acagggtttt
     4021 cttcatattt gtcgctttct aaaaattccg gctgccaaaa caagcggaat gataacccat
     4081 aaaacctgag cggtcagcaa aacggggacg gtcaggctga tttgtccgct caaacccgcc
     4141 atacccgc
//
LOCUS       DAXHKG010000146         4128 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.146, whole genome shotgun sequence.
ACCESSION   DAXHKG010000146 DAXHKG010000000
VERSION     DAXHKG010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.146"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            43..675
                     /locus_tag="ACFMWP_001827"
     CDS             43..675
                     /locus_tag="ACFMWP_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HFC5892383.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="ACFMWP_001828"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="ACFMWP_001828"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HFC5892384.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIVEVPPFSAGTLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCHNFVEIGLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKVFIGSLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2198..4066
                     /locus_tag="ACFMWP_001829"
     CDS             2198..4066
                     /locus_tag="ACFMWP_001829"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC5892385.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSRFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTASGKRQLLSLLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDTTLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRGGALQ"
BASE COUNT          935 a         1113 c         1073 g         1007 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcgggc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttcagag tacggcctga
      841 tgaaggcgcg cgtcaaagtc gaattaaact ggctcaaagc cctggccgcc gagccgaaga
      901 ttgtcgaagt gccgcccttc agtgccggaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gcccacaaca ctgggcaaag aaaccgccaa cgtcgtgtac cgcctgcaac
     1321 gccagttcaa aatccttcag gcgcaagaat tcctcggcaa aatcaacggt gcggtcggca
     1381 actacaatgc ccatatggcc gcttatcccg atgtggattg ggaaacccac tgccacaact
     1441 tcgttgaaat cggcctcggt ttgaccttca acccctatac catccaaatc gagccgcacg
     1501 actatatggc tgaattcttc caaaccctca gccgcatcaa cacgattctc atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc ttccacgatg ccgcacaaag tcaaccccat cgattttgaa aactccgaag
     1681 gcaacctcgg tatggcaaac gccgtattgg gttttttggc ggaaaaactg cccgtctcac
     1741 gctggcagcg cgatttgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggctttgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggagctgct cgccgagccg attcaaaccg
     1921 tgatgcgtcg ttacggcgtg gccaatcctt acgaaaagct caaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag tcttcatcgg atcgttggaa attccggcag
     2041 aagccaaagc aaaattgctt gagctgactc ctgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacgggggc gatatttatg caagctgtcc gatacaggcc
     2221 tgaaattgac ggattgcggg ccgttgccgt gctatccgtc attattttcc acctgaataa
     2281 ccgctggctg cccggagggt ttttgggggt ggacattttc tttgtcatct cgggattcct
     2341 cattaccggc atcattcttt ctgaaataca gaacggttct ttttctttcc gggattttta
     2401 tacccgcagg attaagcgga tttatcctgc ttttatcgcg gccgtgtcgc tggcttcggt
     2461 gattgcctct caaatcttcc tttacgaaga tttcaaccaa atgcggaaaa ccgtggagct
     2521 ttctgcggtt ttcttgtcca atatttatct ggggtttcag caggggtatt tcgatttgag
     2581 tgccgacgag aaccccgtac tgcatatctg gtctttggcg gtagaggaac agtattacct
     2641 cctgtatcct cttttgctga tattttgctg caaaaaaacc aaatcgctac gggtgctgcg
     2701 taacatcagc atcatcctat ttctgatttt gactgccaca tcgtttttgc caagcaggtt
     2761 ttataccgac atcctcaacc aacccaatac ttattacctt tcgacactga ggtttcccga
     2821 gctgttggca ggttcgctgc tggcggttta cgggcaaacg caaaacggca gacggcaaac
     2881 agcaagcgga aaacggcagt tgctttcatt actctgcttc ggcgcattgc ttgcctgcct
     2941 gttcgtgatt gacaaacaca atccgtttat cccgggaatg accctgctcc ttccctgcct
     3001 gctgacggca ctgcttatcc ggagtatgca atacgggaca cttccgaccc gcatcctgtc
     3061 ggcaagcccc atcgtatttg tcggcaaaat ctcttattcc ctatacctgt accattggat
     3121 ttttattgcc ttcgcccatt acattacagg cgacaaacag ctcggactgc ctgccgtatc
     3181 ggcggttgcc gcattgacgg ccggattttc cctgttgagc tattatttga ttgaacagcc
     3241 gcttagaaaa cggaagatga ccttcaaaaa ggcatttttc tgcctctatc tcgccccgtc
     3301 cctgatactt gtcggttaca acctgtacgc aagggggata ttgaaacagg aacacctccg
     3361 cccgttgccc ggcgcgcccc ttgctgcgga aaatcatttt ccggaaaccg tcctgaccct
     3421 cggcgactcg cacgccggac acctgcgggg ttttctggat tatgtcggca gccgggaagg
     3481 gtggaaagcc aaaatcctgt ccctcgattc ggagtgtttg gtttgggtgg atacgacact
     3541 ggcagacaac ccgttatgtc gaaaataccg ggatgaagtt gaaaaagccg aagccgtttt
     3601 cattgcccaa ttctatgatt tgaggatggg cggccagccc gtgccgagat ttgaagcgca
     3661 atccttccta atacccgggt tccaagcccg attcagggaa accgtcaaaa ggatagccgc
     3721 cgtcaaaccc gtctatgttt ttgcaaacaa cacatcaatc agccgttcgc ccctgaggga
     3781 ggaaaaattg aaaagatttg ccgcaaacca atatctccgc cccattcagg ctatgggcga
     3841 catcggcaag agcaatcagg cggtctttga tttggttaaa gatatcccca atgtgcattg
     3901 ggtggacgca cagaaatacc tgcctaaaaa cacggtcgaa atacacggac gctatcttta
     3961 cggcgaccaa gaccacctga cctatttcgg ttcttattat atggggcggg aatttcacaa
     4021 acacgaacgc ctgcttaaat cttcccgcgg cggcgcattg cagtagcctg ccttcttgtc
     4081 ggatattgcc tttggcagcc tatgccgctg tttgcccttc ggggcggc
//
LOCUS       DAXHKG010000147         4099 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.147, whole genome shotgun sequence.
ACCESSION   DAXHKG010000147 DAXHKG010000000
VERSION     DAXHKG010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.147"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(202..1098)
                     /gene="argB"
                     /locus_tag="ACFMWP_001830"
     CDS             complement(202..1098)
                     /gene="argB"
                     /locus_tag="ACFMWP_001830"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HFC5892386.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGYIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKMGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1268..2398
                     /locus_tag="ACFMWP_001831"
     CDS             1268..2398
                     /locus_tag="ACFMWP_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HFC5892387.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFDNAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDHQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGVNLNREWENPTVEKSPEVFFVRERMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANVTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAVLSAILNVAGDLR"
     gene            2471..3322
                     /gene="lgt"
                     /locus_tag="ACFMWP_001832"
     CDS             2471..3322
                     /gene="lgt"
                     /locus_tag="ACFMWP_001832"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HFC5892388.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVIFGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3405..4067)
                     /locus_tag="ACFMWP_001833"
     CDS             complement(3405..4067)
                     /locus_tag="ACFMWP_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HFC5892389.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
BASE COUNT          905 a         1195 c          997 g         1002 t
ORIGIN      
        1 aaaatcaaag ccggagaatt tatcccaaac aaccggattt caaaaaaacc agattcccgc
       61 cttcgcggga atgacggatt ttaggtttct gttttggttt ctgttttcgc gggaataaca
      121 acttagaaat tgcccgaaac cccaaaaaca gaaaccggac aaacgggttt tccgccaaag
      181 ccggcatttt ccgactttgc ttcaggcatc ttccccgccg cctaaaatca tcgaaccgat
      241 accggcatca gtaaagattt ccaacaaaag cgcgttgggc aacctgccgt cgatgatgtg
      301 cgtggctttc acaccgttga cggcggcttc gaccgcagaa gcgattttcg gcagcatacc
      361 gccatacagc gtgccgtcgg caatcagttc atcaatccgt ttcggcgtga gtttggtcag
      421 cagattgccc attttgtcca tcacaccggc gatattcgtc atcatcaaga gtttttcagc
      481 gttcaattct tccgccaatt tgcctgctac caaatcggcg ttgatgttga acgcttcgcc
      541 tttttcacct acgccgacgg gggcgacgac gggaatgtag ccgcgttcta tcagcccttt
      601 aaccaaaccg gtatcgatgc tttccaccgt accgacctgt ccgatgtcca cgccattctg
      661 ttcgggcgta tcgatcaaaa gtttcttcgc cttaatgaaa tgatcgtcgc gtccgctcac
      721 gccgaccgcg tgtccgccat atgtgttaat catcgacacg atttctttat tgacatgccc
      781 gcccaacacc atttcgacaa tatccatcgc ctctttgtcg gtaacgcgca ttccttggac
      841 aaactcaccc tttttgccga ctttttcaag catcgcattg atctgcggcc cgccgccgtg
      901 aacgatgacg ggatgaatgc cgaccagctt cagcagcacg acatcgcggg caaacccttc
      961 tttcaaggca ggttcggtca tcgcgttgcc gccgtatttg atgacggcga ccgaaccgga
     1021 aaaccggcgg atgtaaggca gcgcttcggc aaggatacgc gccttgtcgg cggcggaaat
     1081 aatgttttca gactccataa cggctcccta ttgttgacaa tttcggctta tgttaacgcc
     1141 aaacgccgtc tgaaacaatc ttcagacggc atccggcaga ctttcgggca ggttgaagcc
     1201 ttgcgatacg ggcggtaaaa tcgcggttta tccggttcga gaaaccggcg acagcaagga
     1261 ctttcccatg attaaaatca gcacccgctt cgatgccggc tcggtcgtcg tcaaagacct
     1321 gaccgatcct tccaacatcc gcctcgccct gcgtcccgac aacgcctccg attttgcaca
     1381 atggttctac ttccggctgc aaggcgcggc atatcaaaac tgcatcatgc attttgacaa
     1441 tgcggcagaa gccgcctacc cgaaaggctg ggaaggctat caggcgtgtg cctcatacga
     1501 ccgccgcaac tggttccgcg taccgacttc ctacgaaaac ggcgtactga ccgtcaacca
     1561 taccccgctg tccaatagcg tgtactacgc ctatttcgaa ccctattccg aagaacagca
     1621 cctcaacctc ctcggcgacg cgcaaggcag cggcctgtgc cgcatcgacg acttgggcag
     1681 caccgtgcaa gggcgcgaca tcaatctgct gaccataggc aaccaggtcg aaagcgattt
     1741 gaaaatctgg attaccgccc gccagcatcc aggcgaaacc atggcggaat ggtttgtcga
     1801 ggggctgctc ggcagactgc tcgaccatca ggatgcaacc gcgcgcaccc tgctcgatcg
     1861 cgccacgttc tatatcgtcc ccaacatgaa ccccgacggt tcggcactgg gcaaccttcg
     1921 caccaacgcc gccggtgtga acctcaaccg cgaatgggaa aatccgactg tggaaaaaag
     1981 ccccgaagtg ttcttcgtgc gtgaaagaat gctggaaacc ggcgtggatt tgtttttgga
     2041 tatccacggc gacgaagggt tgccctttgt ctttgttgca ggaactgaag gcgtgccgaa
     2101 ctacaatccg cgcatttccg cgttggaaac acagttcaaa accgcccttt tgaacgccag
     2161 ccccgatttc caagatgaat acggttacga aaaagatgcg cccggtcagg caaacgtgac
     2221 cttggcaaca aactgggtcg gcaaccgttt caactgcctt gcctatacgt tggaaatgcc
     2281 gttcaaagac aatgccaacc tgcccgacga cgacttcggg tggaacggtc aacgttcgtt
     2341 gcgcttgggc gaagcggtgc tttccgccat tttgaacgtc gccggcgatt tgcgttgaca
     2401 ctccccactg aaaaatgccg tctgaaagcc cttccccttt tcagacggca tttgaaaacg
     2461 aaagcccgtt atgattaccc atccccaatt cgaccccgtc cttatcagta tcggtccgct
     2521 tgccgtccgc tggtatgccc taagctacat cctcggattt attcttttta cctttctcgg
     2581 cagaaggcgc atcgcgcaag gcttgtccgt ttttaccaaa gaatcgcttg acgacttcct
     2641 cacttggggc attttgggcg taatttttgg tgggcgtttg ggttacgtcc tgttttacaa
     2701 gttttccgac tacctcgccc atccgcttga tattttcaag gtatgggaag gcggaatgtc
     2761 gttccacggc ggctttttgg gtgtagttat tgccatatgg ttgttcggcc gcaaacacgg
     2821 catcggcttc ctcaaactga tggacacggt cgcaccgctc gttccgctgg gtctcgcttc
     2881 gggacgtatc ggcaacttca tcaacggcga actttgggga cgcgttaccg acatcaacgc
     2941 attttgggca atgggcttcc cgcaggcgcg ttacgaagat gccgaagccg ccgcgcacaa
     3001 tccgctttgg gcagaatggc tgcaacaata cggtatgctg ccgcgtcatc cctcgcagct
     3061 ttatcagttt gcacttgaag gcatctgcct gttcgccgtc gtttggctgt tctctaaaaa
     3121 acagcggccg accggacaag tcgcctcgct cttcctcggc ggctacggca tattccgctt
     3181 cattgccgaa ttcgcacgcc aacccgacga ctatctcggg ctgctgacct tggggctgtc
     3241 gatggggcaa tggttgagcg tcccgatgat tgttttgggt atcgtcggct ttgtccggtt
     3301 cggcatgaaa aaacagcact gaccgcctgt gaaaaatacc gtctgaaaca tggaaatccg
     3361 gtttcagacg gcatttttac gtttggttca tggaaacaaa cgcttcaatt cttaccgcaa
     3421 cacgccttgt attttctgcc gctgccgcac ggacagggat cgttcctgcc tgttttttcg
     3481 ccttccctgc ggacggtttg cggcttgttg atgaccgcct gccagtagcg gtagatatcc
     3541 gccaatgcat aaggcaactc ggattccagt tccgccagct cgccttctgt gaattgcaga
     3601 cggatagtgc cgttgtcctc ttcgtcgtaa ataccgccca atgccatgat gggataaaac
     3661 aactcttcaa acgcttcatc atcgacggct tcaaaccaat cggtcggcac aatatccaaa
     3721 ccgtaaagat aagcattgca ccatgtgtaa aaatcgctgc cgccgtcttc gttttcatac
     3781 agccacaaat cgggcagttt tttatccgac atcgcggcgg ttgtttccat cgccattgcc
     3841 aaaaccagcc gttcgatttc ggaacgttcg gcggcggtaa attgcgattc gtcgcccaac
     3901 acttcgggca gccagtcgag cggtgtcaat ttgtccggcc cgctcaacag cgccgtcata
     3961 aaaccttgaa cctcgtcgca acgcatcgtg ttgccttgtt cgcttttggc atccaacaat
     4021 tcgctcaacc gccgtttgga tgcttcggta aatttttggg aatccatcat tttccttttc
     4081 aaatgggttt tgcgcccta
//
LOCUS       DAXHKG010000148         4061 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.148, whole genome shotgun sequence.
ACCESSION   DAXHKG010000148 DAXHKG010000000
VERSION     DAXHKG010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4061
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.148"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            38..461
                     /locus_tag="ACFMWP_001834"
                     /pseudo
     CDS             38..461
                     /locus_tag="ACFMWP_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            567..1130
                     /gene="pgsA"
                     /locus_tag="ACFMWP_001835"
     CDS             567..1130
                     /gene="pgsA"
                     /locus_tag="ACFMWP_001835"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HFC5892390.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1210..1285
                     /locus_tag="ACFMWP_001836"
     tRNA            1210..1285
                     /locus_tag="ACFMWP_001836"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1243..1245,aa:Gly,seq:gcc)
     gene            1311..1386
                     /locus_tag="ACFMWP_001837"
     tRNA            1311..1386
                     /locus_tag="ACFMWP_001837"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1344..1346,aa:Gly,seq:gcc)
     gene            1410..1485
                     /locus_tag="ACFMWP_001838"
     tRNA            1410..1485
                     /locus_tag="ACFMWP_001838"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Gly,seq:gcc)
     gene            1507..1582
                     /locus_tag="ACFMWP_001839"
     tRNA            1507..1582
                     /locus_tag="ACFMWP_001839"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Gly,seq:gcc)
     gene            1608..1681
                     /locus_tag="ACFMWP_001840"
     tRNA            1608..1681
                     /locus_tag="ACFMWP_001840"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1640..1642,aa:Cys,seq:gca)
     gene            1784..1873
                     /locus_tag="ACFMWP_001841"
     tRNA            1784..1873
                     /locus_tag="ACFMWP_001841"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1818..1820,aa:Leu,seq:taa)
     gene            1977..3029
                     /gene="sohB"
                     /locus_tag="ACFMWP_001842"
     CDS             1977..3029
                     /gene="sohB"
                     /locus_tag="ACFMWP_001842"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HFC5892391.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3080..3943)
                     /locus_tag="ACFMWP_001843"
     CDS             complement(3080..3943)
                     /locus_tag="ACFMWP_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HFC5892392.1"
                     /translation="MENVETHSQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVI
                     AGQAWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVT
                     ARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPR
                     FAAISENLYFRLKNSLERDNHFIRKGDERQLDRHYGLLARLRVLISNREAFGYLCVGT
                     AMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRI
                     EWSKRNIKAGT"
     gene            complement(3956..>4061)
                     /locus_tag="ACFMWP_001844"
     CDS             complement(3956..>4061)
                     /locus_tag="ACFMWP_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HFC5892393.1"
                     /translation="KVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1023 a          966 c         1059 g         1013 t
ORIGIN      
        1 tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt ttattgcacc
       61 ttacctgacg gcatttcacg aacaagaaaa aacattcgaa tatgcggaat tgaccgttac
      121 cgcccccaac cgcagcggac gggcaatcaa actggatgca gacgggcagc attaccggct
      181 ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa ccatcagggc
      241 ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa acggcgttct
      301 gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc cgcacggaag
      361 accgccttgt cgaagtgttg gcacaacctg ccgttttctg cctgaaactg ggtattttgc
      421 ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacagatt ggcggggcgg
      481 gggaatgccc atgcagcaat tttacgtttt gggttatgag gataaccgtt ataatcacaa
      541 ctttacagtc tgcacagaga aaaccgatgc cttggaatct ccctatcttc ctcacatggt
      601 tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt ccgtggttcg
      661 cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc ttaaccgact
      721 ggtttgacgg atttttggca agactgtgga aacagacttc cgatttcggc gccttcctcg
      781 atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc aaactcgacc
      841 ggacctatgt tttgtttgcc atgatcatta tcggcaggga aattaccatt tccgcattgc
      901 gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc gtcggtaagt
      961 tcaaaaccgc cgcgcaaatg ctggcaattt tcctgctgct gctgaatatt cccgattttt
     1021 acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct ttgctgacag
     1081 tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga aaaaaacata
     1141 aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga tgttggagaa
     1201 tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg
     1261 agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt gcgggaatag
     1321 ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga ctcgtttccc
     1381 gctccaagtt ttatttcaaa catatcaacg cgggaatagc tcagttggta gagcgcaacc
     1441 ttgccaaggt tgaggtcgcg agttcgagac tcgttttccg ctccaaaaac cgatatgttt
     1501 gaacgcgcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
     1561 tcgagactcg tttcccgctc caagtttttt agataagcca gttttagggc gagatagcaa
     1621 agtggttatg cagcggattg caaatccgtc tacgccggtt cgattccgac tctcgcctcc
     1681 attatcgtac tacggcgggg tggcagagtg tttatgctat gaggagtgca atcttcatat
     1741 aggccggtta aaatccgcgc ccccgcctcc acctttcaca aatgcccggg tggtgaaata
     1801 ggtagacaca acggacttaa aatccgtcgg gactaaacat cccgtgccgg ttcgattccg
     1861 gctccgggca ccaagctgaa aatgacaatg ccgctccaag cggttatttt tttatctgtc
     1921 ggacggtgat ggacaatatt gacatgttca tgcctgaaca agaggaaatc caatcaatgt
     1981 ggaaagaaat tttactgaat tacggtattt tcctgctcga actgcttacc gtgttcggcg
     2041 caattgcgct gattgtgttg gctatcgtac agagtaagaa acagtcggaa agcggcagtg
     2101 tcgtactgac ggatttttcg gaaaattata aaaaacagcg gcaatcgttt gaagcattct
     2161 ttttaagcgg ggaagaggca aaacatcagg aaaaagagga aaagaaaaag gaaaaggcgg
     2221 aagccaaagc agagaaaaag cgtttgaagg agggtgggga gaaatcttcc gaaacgcaaa
     2281 aatcccgcct ttttgtgttg gattttgacg gcgatttgta tgcacacgcc gtagaatcct
     2341 tgcgtcatga gattacggcg gtgcttttga ttgccaagcc tgaagatgag gttctgctta
     2401 gattggaaag tccgggcggc gtggttcacg gttacggttt ggcggcttcg cagcttaggc
     2461 gtttgcgcga acgcaatatt ccgctgaccg tcgccgtcga taaggtggcg gcgagcggtg
     2521 gttatatgat ggcgtgtgtg gcggataaaa ttgtttccgc tccgtttgcg attgtcggtt
     2581 cggtgggtgt tgtagcggaa gtaccgaata tccaccgcct gttgaaaaaa catgatattg
     2641 atgtggatgt gatgacggcg ggcgaattta agcgcacggt tacttttatg ggtgaaaata
     2701 cggaaaaggg caaacagaaa ttccgacagg aactggagga aacgcatcag ttgttcaagc
     2761 agtttgtcag cgagaaccgc cctcaattgg atattgagga agtggcaacg ggcgagcatt
     2821 ggttcggtcg gcaggcgttg gcgttgaact tgattgacga gatttcgacc agtgatgatt
     2881 tgttgttgaa agcgtttgaa aacaaacagg ttatcgaagt gaaatatcag gagaagcaaa
     2941 gcctgatcca gcgcattggt ttgcaggcgg aagcttctgt tgaaaagttg tttgccaaac
     3001 ttgtcaaccg gcgggcggat gtgatgtagt ttgccgaacg gatggaaatg ccgtctgaag
     3061 cgtgttcaga cggcattttt caagttccgg ctttgatgtt ccgtttcgac cactctatcc
     3121 gttgtccgat gtctttcaaa ttggaatatt gttcgaccaa tcgcggcacg tcgtccaaac
     3181 tcatggcaaa catccacaga taagtgccga ccgaatagac atgccccgcg ctgctgtagc
     3241 ctttgagcgt catcatcaca aaagcaaagc cgaacaaaat acccatcgcc gtgccgacgc
     3301 agagatagcc gaaggcttcg cggttggaaa tcagcacacg caggcgcgca agcagtccgt
     3361 aatggcggtc cagctgccgc tcgtcgcctt ttcggataaa gtggttgtcg cgttccaagc
     3421 tgttcttcag gcggaaatac aggttttcgc tgatggcggc aaaacgtggc aaaagccata
     3481 aaaacaacgc aagtatgccc accgccgaca cgccgaccca aaattccagc accagcagca
     3541 tgatgcacgc gccgaatatg gatacgacgg atgtcgcggc aatcggcagg tgttcttcaa
     3601 aaaagctgac aaactcacgc gacagggcaa cccgcgcagt taccgccgaa tgcgggactt
     3661 gccgctgccg ctgttccaac acaaccggca cggcgatttc ggtataaatc cgcgtaaacg
     3721 tgcgcgtatc ggcaatccgc cgcgccgcac cgaccagcca catcaaaagc acaaccaaag
     3781 cgtacagcaa cgcctgccac gcctgccccg caatcacggc attaatcgcc cagccgccaa
     3841 acaccggata caccagcatc aaaaggtttt ccagtccgac cagaaaaaat gtgccaatca
     3901 atcgcttgcg gtggttttgg ctatgtgttt caacattttc cacatatttg cccccctatt
     3961 ttttattttc cgagattgtt ttttccatca cttcagccag tgcatccaaa tcggcaaaca
     4021 gccgggttgt gcgcttgtcg ccgaatgtgg caaatacttt g
//
LOCUS       DAXHKG010000149         4014 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.149, whole genome shotgun sequence.
ACCESSION   DAXHKG010000149 DAXHKG010000000
VERSION     DAXHKG010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.149"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(206..277)
                     /locus_tag="ACFMWP_001845"
     tRNA            complement(206..277)
                     /locus_tag="ACFMWP_001845"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(242..244),aa:Arg,seq:cct)
     gene            complement(297..743)
                     /locus_tag="ACFMWP_001846"
     CDS             complement(297..743)
                     /locus_tag="ACFMWP_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HFC5892394.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(748..1722)
                     /gene="ispB"
                     /locus_tag="ACFMWP_001847"
     CDS             complement(748..1722)
                     /gene="ispB"
                     /locus_tag="ACFMWP_001847"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HFC5892395.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDGKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVDSDSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVAALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1946..2254
                     /gene="rplU"
                     /locus_tag="ACFMWP_001848"
     CDS             1946..2254
                     /gene="rplU"
                     /locus_tag="ACFMWP_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HFC5892396.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2279..2551
                     /gene="rpmA"
                     /locus_tag="ACFMWP_001849"
     CDS             2279..2551
                     /gene="rpmA"
                     /locus_tag="ACFMWP_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HFC5892397.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            2786..3970
                     /gene="ubiM"
                     /locus_tag="ACFMWP_001850"
     CDS             2786..3970
                     /gene="ubiM"
                     /locus_tag="ACFMWP_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HFC5892398.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGASSL
                     LEKYSNKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT         1146 a         1110 c          874 g          884 t
ORIGIN      
        1 ccactatatc ataaaacaac agatttccaa gccggaacat cttttacgaa gcctgaaaat
       61 catttcatga ttctaccgtc ctaaaggtcg gtttttcaag caggaagaaa aagttttcag
      121 atggcaaaaa agccctccaa cactgaaagg ccttatatcg gaaacttccc gcaacacggg
      181 aaacagacaa atgcaaatcg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct
      241 taggaggcat acgttctatc cgttgaacta tggcgagccg aaatgaaaag gagattttaa
      301 ccctttccga cgacaaaaga caagatgccg gccgcaatca gcggcccgac agggataccg
      361 cccataaatg ccaccccgat aaccgtcccg attaacagcc ctgtaattaa aacaggctgc
      421 tgtcccatca aaggcacgcc gcgtcccgcc agccaagcca cgaaaatacc gataaaaacg
      481 gcggatatca ttttaaaatt caaaaattcg gcaacgggag gaacctgcgc ctttcctgaa
      541 accaacggac tcaaaacccc tatggtcaaa agaatgatac cgagattcaa cccatgcttc
      601 tcgaccaacg ggacaaactg taccaatgcc gtctgctgca tcagcagcaa tatggttgcc
      661 gagatggtaa tcgaattgtt gttgctgacc acccccaaca gaatcagcgt aaccagaaac
      721 aggggaacaa aactgaaatt catcgcctca agacaccctg accaaagatt ccttcgccag
      781 ctgaatcatg gcatccttca cttcgctgtc gggcagggca tccaaggcgg caacggcaca
      841 atcgactgct ttgcgcgcct cgcctattga atatgccaaa gcatccgaac ggacgacata
      901 atcgtggatt ttctcaaaat agctgcgatc tgcattttcc aaagcagtac gcacatcgtt
      961 cgcaacctgt tcggaaccct gacgcatcag ataaatcaaa ggcaaagtcg gttttccttc
     1021 cgccaaatcg tcgccgacgt ttttgccggt ttcttcggtt tcgccagaat agtccagcac
     1081 atcgtcaata atttggaatg ccgtaccgac atacataccg tagtctttca acgcccgttc
     1141 gtgttcgggg gaagccttgc ccaaaattgc gccgacttga gcggcagctt caaacaattt
     1201 tgccgtttta tattggatga cttggatata ttgttcttcg gtaatgtccg tattgccgat
     1261 gttcatcagc tgcatgactt cgccctcggc aataatgttg gttgcatccg ccatcacttc
     1321 caaaacgcgc atactgtccg agtcaaccat cagttgaaag gcgcgcgtgt ataaaaagtc
     1381 gccaaccaac actgccgccg cattgccgaa cagattgttt gccgttgccc gtccacggcg
     1441 caaatcgctt tcatcgacga catcgtcgtg cagcagcgtc gaagtgtgga taaattcgac
     1501 catcgccgcc agcgaataca gtttcccgtc atcataaccg accgccttac ccgccaaaat
     1561 cgtcataatc ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga
     1621 aatcagtgcg acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc
     1681 ttcaggcaga tgtcgctgga aatagggcag attttcgagc atggcagact ctcaggttta
     1741 cgcttccatc aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc
     1801 agcaaagcca tcagggtaca tcttttcaga cggcatatgg ttatccgaac cgcgcaaact
     1861 ttgacaaaac aggcaaataa caatacaatg ccgagttccg cacaatggtg tgcggatatt
     1921 aaccataacc cttatggagt tgagtatgta cgcggtcgta aaaaccggcg gcaaacagta
     1981 taaagtttcc gtcggcgaaa aattgaaagt agaacagata ccagccgaac tcgacagcca
     2041 aatcgaactg accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc
     2101 ctttatcgaa ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt
     2161 ccgcatcttc aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa
     2221 tttcacccaa atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat
     2281 ggcaagtaaa aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt
     2341 gggcgttaaa gcctacggca acgagctgat tcccgcaggt tccatcatcg tacgccaacg
     2401 cggtaccaaa ttccacgcag gcgacaacgt aggcatgggc aaagatcaca ctttgttcgc
     2461 caaagttgac ggttatgttg aattcaaaac caaaggtgcg ctgaaccgta aaactgtcag
     2521 catccgtcct tacaccggtt ctgaagaata atccaaccga tacctgaagc cgcatctttt
     2581 cacgatgcgg ctttttacat accccacacc cgatttgata cacattaagc tgaaagtaaa
     2641 aatccgcata catcctcccc tgcatatttc ttcaacagcg ggttttgata taatcgccta
     2701 tctgttacag atagttcaaa cggcattcaa acccttacaa atgccgtctg aaatcatcgg
     2761 catccgtcta tgcaaaggat attttatgag tttacacagc gacatcctcg tcgtcggcgc
     2821 aggcccggcg ggtttaagtt ttgcagccga acttgccggc agcggtttga aagttaccct
     2881 gatcgaacgc agcccactga ctgttctgca aaatcctcca tatgacggac gcgaaatcgc
     2941 cctgacccat ttttcccgcg aaatcatgca gcgtttgggt atgtgggaca aaattcccga
     3001 aaacgaaatc taccctttgc gcgatgccaa agtgctgaac ggacgttccg actaccagct
     3061 ccactttccc caaccgactg aagcgcgcgg cgaacctgcc gactgtttgg gctatctgat
     3121 ttccaaccac aatatccgcc gcgccgccta tgaagtcgta tcacaactcg acaatgtcag
     3181 cattctgacc gatacggttg tcaaagaagt caaaacatct gacaacgaag cacaagtcat
     3241 tttggaaaac ggcaaaatcc tgactgcacg cctgcttttg gcggcagaca gccgcttctc
     3301 gcaaacccgt cgacaactcg gtatctcctc cgatatgcac gattacagcc gaaccatgtt
     3361 cgtctgccgt atgaaacata ccctttccaa ccaacatacc gcttacgaat gcttccatta
     3421 cggacgcacc atcgcactgc tgccgctgga agagcacctg accaataccg tcattaccgt
     3481 cgataccgat aaaatcaaca gcgttcaaaa cctttcgccc gaagaattgg cggcaagcgt
     3541 aaaagaacaa ctcaagggta ggcttggcga catggaactg gtcagcagca tccaccatta
     3601 cccccttgtc ggtatgattg ccaaacgttt ctacggcaaa cgcagcgcgc tgatcggcga
     3661 tgcggcggtc ggtatgcacc ctgtaacggc acacggcttc aacttgggtc tttccagcgc
     3721 agatattctg gcaaaactga tactcgaagc cgaacaacgc ggtcaggaca tcggcgcatc
     3781 ttccttgttg gaaaaataca gcaacaaaca tatgctgcac gcccatccgc tttatcacgg
     3841 aaccaatatg atgctgaaac tgtttaccaa cgaaaccgcg ccggcaaaac tgctgcgcgg
     3901 tttggtattg cgtgccggca acaacttccc gccgctgaaa aagctgatta ccaaacaact
     3961 gaccggttga aaactgccga aatgccgtct gaaacgtttc agacggcatt tttg
//
LOCUS       DAXHKG010000150         3925 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.150, whole genome shotgun sequence.
ACCESSION   DAXHKG010000150 DAXHKG010000000
VERSION     DAXHKG010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.150"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(1..593)
                     /locus_tag="ACFMWP_001851"
                     /pseudo
     CDS             complement(1..593)
                     /locus_tag="ACFMWP_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
     gene            complement(602..1396)
                     /locus_tag="ACFMWP_001852"
     CDS             complement(602..1396)
                     /locus_tag="ACFMWP_001852"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HFC5892399.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1780..3114
                     /gene="gdhA"
                     /locus_tag="ACFMWP_001853"
     CDS             1780..3114
                     /gene="gdhA"
                     /locus_tag="ACFMWP_001853"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HFC5892400.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3256..3630
                     /locus_tag="ACFMWP_001854"
     CDS             3256..3630
                     /locus_tag="ACFMWP_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892401.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3674..>3925
                     /locus_tag="ACFMWP_001855"
     CDS             3674..>3925
                     /locus_tag="ACFMWP_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HFC5892402.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQ"
BASE COUNT         1068 a         1014 c          924 g          919 t
ORIGIN      
        1 cttgcgcgat gccgttcaag gacaaaccca tacccttttc ggcaaaacgg atttcacggt
       61 cgtcaaacga gactttgccg aagccgaccc gtttcagggc ttccttcacg ctgttttgag
      121 gaggcggcgt ttccgcatcg ggacgggcgg caaaataatc ggcatacagt ttccacaacg
      181 cctgcactgt cggatcgaac gcgccgtccg tcagcgcgtg aatatcgcgg cacaggctca
      241 acagttccaa aaaatccgcc gacggcgaag tcagataacc gtccctgttc aggcggctga
      301 tcaggctgtc ttcacggtaa aggctgaaca attttttcca aacgcgccac ttccgccaaa
      361 accttgttga ccaaatccgc cgcctgtctg tcgtccacac cgaacaggcg cagctccgca
      421 ccggaaccca gcgcgacacc tttccagaag aacacatttt cattgcgttt ttcatcttta
      481 ttgcgttttt catcatcggc ggcaaaagga ttcggcagga aagaaaccgc cgcgcccgcc
      541 gccgcaacgg cggcaactgt caaaaaacgc ctgcgcccga aatgcctgcc cataccgcct
      601 cctaaaccga cactgccgcc ttgatgtgcg gatgggggtc gtaaccttcc aactcgaaat
      661 cttcaaactt gaaggaaaac aaatctttga cttcaggatt gattttcatc actggcaagg
      721 cgcgcggttc gcgttccaac tgcaatgcgg cctgctcgaa atggttgcgg tacaaatgcg
      781 cgtcgccaaa cgtatggaca aactcgcccg cctccaatcc gcacacttgc gccatcatca
      841 tggtcaacaa tgcgtagctg gcaatattaa acggcacacc aaggaaaata tctgcactac
      901 gctggtaaag ctggcaggac agtttgccgt cggcaacgta aaactgaaac agcgcgtggc
      961 agggcggcaa ggccatttcg tcgaccaaag ccggattcca cgccgataca atcaggcggc
     1021 gcgagtcggg gtttttctta atttgttcca ccacattggc gatttggtcg atatgcctgc
     1081 cgtcgggcgc gggccagtta cgccactggt agccgtaaac cgggcccaag tcgccgtttt
     1141 cgtccgccca ctcgtcccaa atggaaacat tgttgtcctt taggtatttg atattggtat
     1201 cgcctttgag aaaccaaagc agctcgtgga taatcgaacg cagatgcagc tttttggtcg
     1261 tcagcagcgg aaaacctttg cccaagtcaa aacgcatctg ataaccgaat acggagcgcg
     1321 tgcccgtacc ggtgcggtct gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt
     1381 ccaaataggc tttcatagca gtctttcatc aaattaaacg gcgcatattg taacatttcc
     1441 ggataatgcc caaaacacgg atacagacag gcaggattgt tggcaatttc agtccttttc
     1501 cacagtaaaa cccggtggga aaacaaaatt accttgattg gaatcaaaaa atctagttta
     1561 attacttaga ataaaatttc aataatattt ttatttacga aattaattta tgattattga
     1621 ttaattatcg gcaacaaaca tcaaacatcg aaaacatgga aaaaataatg tcaacaattt
     1681 ttgccaaatc gggcttggca tcagaaaaaa ataggtttat attcccacct acaaatttgt
     1741 tttcccatta gtacactatc aaccaaaagg agtatccgaa tgactgacct gaacaccctg
     1801 tttgccaacc tcaaacaacg caatcccaat caggagccgt tccatcaggc ggttgaagaa
     1861 gtcttcatga gtctcgatcc gtttttggca aaaaatccga aatacaccca gcaaagcctg
     1921 ctggaacgca tcgtcgaacc cgaacgcgtc gtcatgttcc gcgtaacctg gcaggacgat
     1981 aaagggcaag tccaagtcaa ccggggctac cgcgtgcaaa tgagttccgc catcggtcct
     2041 tacaaaggcg gcctgcgctt ccatccgacc gtcgatttgg gcgtattgaa attcctcgct
     2101 tttgaacaag tgttcaaaaa cgccttgacc accctgccta tgggcggcgg caaaggcggt
     2161 tccgacttcg accccaaagg caaatccgat gccgaagtaa tgcgcttctg ccaagccttt
     2221 atgaccgaac tctaccgcca catcggcgcg gacaccgacg ttccggccgg cgacatcggc
     2281 gtaggcggac gcgaaatcgg ctatctgttc ggacaataca aaaaaatccg caacgagttt
     2341 tcttccgtcc tgaccggcaa aggtttggaa tggggcggca gcctcatccg tcccgaagcg
     2401 accggctacg gctgcgtcta tttcgcccaa gcgatgctgc aaacccgcaa cgatagtttt
     2461 gaaggcaaac gcgtcctgat ttccggttcc ggcaacgtgg cgcaatacgc cgccgaaaaa
     2521 gccatccaac tgggcgcgaa agtgctgacc gtttccgact ccaacggctt cgtcctcttc
     2581 cccgacagcg gtatgaccga agcgcaactc gccgccttga tcgaattgaa agaagtccgc
     2641 cgcgaacgcg ttgccaccta cgccaaagag caaggtctgc aatactttga aaaccaaaaa
     2701 ccgtggggcg tcgccgccga aatcgccctg ccctgcgcga cccagaacga attggacgaa
     2761 gaagccgcca aaaccctgtt ggcaaacggc tgctacgtcg ttgccgaagg tgcgaatatg
     2821 ccgtcgactt tgggcgcggt cgagcaattt atcaaagccg gcatcctcta cgccccggga
     2881 aaagcctcca atgccggcgg cgtagcaact tcaggtttgg aaatgagcca aaacgccatc
     2941 cgcctgtctt ggactcgtga agaagtcgac caacgcctgt tcggcatcat gcaaagcatc
     3001 cacgaatcct gtctgaaata cggcaaagtc ggcgacacag taaactacgt caatggtgcg
     3061 aacattgccg gtttcgtcaa agttgccgat gcgatgctgg cgcaaggctt ctaagcaaac
     3121 gccgccgctc cgcaaacaaa atgccgtccg aaccgcaaat gctgttcaga cggcatttca
     3181 ttatccgccc gttcgaatcg ggtgatacta tttgtatcca gaattgttgg atagtttggg
     3241 agtggagagg aagaaatgat tatggaccaa tactatatgg agttaaagaa taagttatct
     3301 aacagaccaa tcctactgga taatactaat gattttcttt ttgttttagt aaatacagtg
     3361 aaagctatga tagaaaatac tgataaaagt cagctttcag agttagataa aattttagac
     3421 ggtgtcacaa gtcaagaatt gaaacttgcc tatgattttt gtcaagggaa attcggtcaa
     3481 gcaggttttt cttatcgtag gcacccgaat tatttttatt tgtccagttt aattgcgact
     3541 tttccagaat ttgagttgtc taaagcagac cgagattacc tcaaaggaat cataaatttt
     3601 gataactacc ttttatatga gttagattag tctttaatca cctcaaaacc ctatttattc
     3661 aaaaggagaa aaaatgattg agctgaaatt agtagatgag agcagttttc aggcagtgct
     3721 ggatttgaaa atatctgaag ctgatgaacg agcacgtttt gtggctccaa atgtacgctc
     3781 tttagctgac gcatggctct accgggaaaa tgaagatgtg tttccgaggg caatctattg
     3841 ggataagcaa gtggttggct ttctcctgct ggaaatagac aaggatgaag cagaatactt
     3901 tatctggcgg ataatgattg gtcag
//
LOCUS       DAXHKG010000151         3898 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.151, whole genome shotgun sequence.
ACCESSION   DAXHKG010000151 DAXHKG010000000
VERSION     DAXHKG010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3898
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.151"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            362..2143
                     /locus_tag="ACFMWP_001856"
     CDS             362..2143
                     /locus_tag="ACFMWP_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HFC5892403.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDSALQKGWQ
                     KGLHSVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAENWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDAQGQSAWTLCFSPELFLKIGSDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLEAEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENGRCALLDRHLCRLKTSAQALNLPLPDGCENQIKQYIARLPDGAFRIKALLASDG
                     ISLSRAVLNRLTDKQRVIISPAVLPAQNYLRRFKTTCRALFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
     gene            complement(2202..3719)
                     /locus_tag="ACFMWP_001857"
     CDS             complement(2202..3719)
                     /locus_tag="ACFMWP_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC5892404.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAEKLDLPAPVLENVGRFRKKAEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGS
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGIAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
BASE COUNT          932 a         1278 c          871 g          817 t
ORIGIN      
        1 caacgaagcc gaagacagta cagatagtac ggaaccgatt cacttggtgc ttcagcacct
       61 gagagaatcg ttctctttga gctaaagcga ggcaacgctg tactggtttt tgttaatcca
      121 ctatacttgg agctggtctt gcttttcgcc taattctacg ttttcaaacg gttgcagctg
      181 gtggtctgtc ataaaggtct ccttattgta tttcaggttg gaaatcggaa tttgttttca
      241 caattttaca ccttcgcccc ccactttctc tacataaaat tacattttgc cgatatttgc
      301 cgaatcgtct gaaaatatgt gtaaaaagag cgtataatca aaacatttgc cccgaattgc
      361 catgccttat ttcgccctgt ttgacgatgc cgtaagcggc cgcgcaaaac gctatcaaaa
      421 tcatgtggaa agccgttttt tccgtcccga agaactcgat gctttggaca gcgcgctgca
      481 aaagggctgg caaaaagggc tgcattcggt gttgtttgca gactacggat tcggtttgcc
      541 gctgacgggg gtcgagtccg aacgcggcgg caaccttgcc ctgcactggt ttgccgactg
      601 cgccgacacc gatgccgaaa actggcttgc ccgacattca gacggcctcc ccgccggcat
      661 ttccacgccg caatcctccg tatccgaagc cgattacctc gaccatatcc gccaaatcca
      721 cgaagccatc cggcgcggcg acacctatca aatcaactac accacccgcc tgcacctgca
      781 agcctacggc aatcccgtca gcctctaccg ccgcctgcgc cagcccgtcc cctatgccgt
      841 tttgtcccac ctgcccgatg cacaagggca atccgcgtgg acgctgtgtt tctcgcccga
      901 actcttcctc aaaatcggtt cggacggcac catcagcacc gaaccgatga aaggcaccgc
      961 gccgattttg ggcgacggac aagacgaacg ccgcgccgcc gagttgcaag cagacccgaa
     1021 aaaccgcgcc gaaaacgtga tgattgtcga tttgctgcgt aacgacctcg gcaaaatcgc
     1081 ccaaaccggc acagtatgcg tacccgaacc gtttaaagta tcgcgtttcg gcagcgtttg
     1141 gcagatgacc agcaccatcc aagcccaagc cttgccgcac acctcgttcg ccgacatcct
     1201 ccgcgccgcc ttcccctgcg gcagcatcac cggcgcgccc aaaaaaatga gtatgcagat
     1261 tatcgaatcg ctcgaagccg aagcgcgcgg actttatacg ggcagcatcg gctatttgaa
     1321 cccgtgttcc ggcggcttgg ggtttgaagg cacgttcaac gtcgttatcc gcaccttgtc
     1381 gctcacgccg ctttcagacg gcatttatca aggcgtgtac ggtgtcggtt ccggcatcgt
     1441 catcgacagc gaccctgccg ccgaatatcg ggaatgcggc tggaaagccc gtttcctcaa
     1501 cgaattgcgc cccgacttcg gcatttttga aaccctgcgc gtggaaaacg gacgctgcgc
     1561 cctgctcgac cgccacctat gccgtctgaa aacctccgcc caagccctca acctgcccct
     1621 gcccgacggt tgcgaaaatc aaatcaaaca atacatcgca cgcttgcccg acggcgcgtt
     1681 ccgcatcaaa gccctgctcg cttcagacgg catcagcctg tcccgcgccg ttttaaaccg
     1741 tctgaccgac aaacaacgcg tcatcatttc gcccgccgtc ctgcccgcac aaaactacct
     1801 gcgccgcttc aaaaccacct gccgcgccct cttcgaccaa gcgtggcaaa ccgccgaaac
     1861 acaaggcgcg ttcgacagcc tgtttttcaa ttcagacggc atcctgctcg aaggcggcag
     1921 aagcaacgtg ttcgtcaaac atcgcggaca atggctcacg ccctccttag atttagacat
     1981 tttaaacggc ataatgcgcc aagccgtatt ggacgaaccg caaaaatatt tgcaaacaaa
     2041 tcaagtaatc gaaacacaca tcacacaaaa aacactgcaa gaagccgaag aaatccgcct
     2101 ctccaacgcc ttgcgcggcg tatttgccgc cgcccttgcc tgaacgcgca aaaatgccgt
     2161 ccgaacctgt ttccaaagtt cggacggcat tatcccacca ttcaaaaccg ccaatccgcc
     2221 gacacaaaca cctcgctgtt gcggcgtttc gcatacggca cattactttc cgtcctgccg
     2281 aaacgataat tcaacgccgg cacgatacct ttgtacgaca acttgtcgtg gctcaaagcc
     2341 agcgagacat tccattcgcg gttgcgttgc gcctctgtcg agaaagccgc aatgccctta
     2401 tagttgcggc gggcataaga cgcagaaacc cgactgttca aaccgcccaa ctgccgccac
     2461 tcctgcgccc aaccggcata aacaccgttg cgccggtagg cggcattatt gaccgcgccg
     2521 cccaccgttt cgcgtttcgg cacaaaccgc acaaactgcc agccgccgaa cacagttgcc
     2581 gattcgccca aacgttttgc cgacgaaaca taaaacccgt cctgcctgcc gttattgtat
     2641 tccgccctat cctgttcgcg gtagcgttgg cggtaatgtt ccagcgcgac cgaaaattgc
     2701 catcccgggt ttgggcggta agtatgggac aactgcacgc cgactccgtg cgccagcata
     2761 tacggcggca ggcggcggtt gtttacccgt tttgttttcg catcaaagcc gtcgctgccc
     2821 gacaactgca cctgataaaa cggcaaaatc cccgccgtct gccgtgcatt tttatactgc
     2881 caacccaaat acgctctgcc gaacccgtcg tcataagctg attttttact gaaataatag
     2941 ctcgtgccgc cgatattgga acggaacaac aaataatgat tatctgccaa cgccgtcagt
     3001 ttttccgcct cgatttcata attcaagcct gccgcccgct ccgcccggct gacactgcat
     3061 atctgactgc ctccgttttg ccggcaatac tgcggcgcgg cattattggc atttctattg
     3121 accgccgggc tgataccgcc cgaaaaacgc cagcccgtca gcccctccgc ttttttccga
     3181 aaacgcccca cattttccaa aaccggcgcc ggcaaatcca atttttccgc ctcggcaaaa
     3241 tgcctttctg ccgacttcag ccggaaatcg tcaaactccg ccgccgccaa atccagcaaa
     3301 atccgctcgt ctgccgcatt ttccccgtgc agttcccgat accgcgccac cgcctccgcc
     3361 ggccttcccg ccaatttcgc cagcaaagcc cgcgccctgc cgtacaaaac cgcgtcataa
     3421 tccggcagct tggcatacaa atccgccaac gaagcgatta aatccgcctg attgccgttg
     3481 agcgcgtcgc gcaaactatg ttccaacatt ttcgggtgcg ccaacaaaaa atccccgtca
     3541 accacgcgcg gggcatcatt ttcaactttc caatccgatt ccgcccactt atccgacacc
     3601 gaccgctgca cctgcaacaa tgccttgtca tccaaaatcg cgggcgcatc cgccccatag
     3661 gcggcagaaa cacctgccgc acaccaaaca accaaaaaac cgtatctgaa atacaacata
     3721 ccctgtcatt tacctttctg gcaaacacgc cgccgaagca cgtcaaacca tccgaaaaac
     3781 aggcagaaac ccgtgaaaac cggctttgcc gtctgaaagc gggcaggcaa aaaaccgccg
     3841 cccgattttc aaagggcgga tttcacattt atagtggatt aacaaaaatc aggacaag
//
LOCUS       DAXHKG010000152         3888 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.152, whole genome shotgun sequence.
ACCESSION   DAXHKG010000152 DAXHKG010000000
VERSION     DAXHKG010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.152"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..2121
                     /locus_tag="ACFMWP_001858"
     CDS             <1..2121
                     /locus_tag="ACFMWP_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFC5892405.1"
                     /translation="GKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFGG
                     ESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMNPE
                     GAVSGSVNIETKKAADEGNRKIGLGRFSNNRAQGTFDLGQRFGENKAFGVRANGKLRH
                     GDTPRHGYSEDNKEFAVNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNAGGRLFG
                     APDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVCL
                     NATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLSARGEFETGPVTHN
                     WSTAFDRVIRQRKTINGSGNGNSKIEVKANENIANQLASFTADYPNSWENSANLDANI
                     KVNSLALSDTLGFVDNKYRLTLGGRFQAVEYTNKKKSQSGDAKRFSPMLMAAWVPQPD
                     LVVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGNFVTTLNAFQIKRP
                     GYWRGHTTTKTTKGVTTTLTYGNNSDFARYKAQGGAAGDEQGMERNRGIEFNTYANLL
                     NNTLRPTLGLMYLQSTVKEYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLNG
                     NVSYFGKSYQDTQKQYAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQR
                     GQYDRSFAVVGMPRTYWLKAELDF"
     gene            2245..3795
                     /locus_tag="ACFMWP_001859"
     CDS             2245..3795
                     /locus_tag="ACFMWP_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HFC5892406.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEA
                     GMVSEPQQ"
BASE COUNT         1100 a          955 c          980 g          853 t
ORIGIN      
        1 ggcaaagcca acgcctttac cgcgccgatt accgtcgtca actacgacga acaagccctc
       61 aacaacaccg aagcgcgtac tttggtggat gccgtagcga aaaaagacgc ttccgtttgg
      121 cagttcggcg gagaaagcaa cacgctgact ggactgtatt tcagaggtta tcagcttgat
      181 gcgcgccaat tcagcgtcaa cggtttggca ggtatgtacg gcacgcaagg cacggccagc
      241 gtgcaagtcg gctccgcaca actgattaaa ggcgcgtcca ccgccgtaaa cggcatgaac
      301 cctgaaggtg cggtatccgg ttccgtcaat atcgaaacca aaaaagccgc cgatgaaggc
      361 aaccgcaaaa tcggtttggg ccggtttagc aacaaccgcg cccaaggtac gttcgatttg
      421 ggtcaacgct tcggcgaaaa caaagcattc ggcgtacgcg ccaacggcaa actgcgccac
      481 ggcgacactc cgcgccacgg ttacagcgaa gacaacaaag aatttgcggt aaatgccgac
      541 tatcgcggcg aaacactgcg cgtagcgttc gattccatct acgcaaaacg caaaaccaac
      601 ggcggtcgcg cgcgtatgca ggacattcaa aacgccggcg gacgcttgtt tggcgcgccc
      661 gatggtaaaa ccaacctgct gccttcttgg aactggcaaa ataccgccgg ccaaaccaat
      721 atgcttacgt ttgaatggga tgcgtttgat aatgcacaga ttacaggcgg tatcggctac
      781 aacaaggcac gctattacgg cacgctgatt tccccgaccg tatgtttgaa tgctaccagc
      841 acttgtaccg atatgcaaaa cacaaacgcc agcggcaaag taacggcacg caactatgac
      901 tacaataccg gtactgcgcg cctgaccgac caatacttcc gcactttaag catgaacctg
      961 tctgcgcgag gcgaatttga aaccggcccg gtaacacata actggagtac ggctttcgac
     1021 cgcgttatcc gccagcggaa aaccataaac ggcagcggga acggcaacag caagatagaa
     1081 gtgaaggcaa acgaaaatat tgcgaatcaa ttggcatcgt ttacagccga ctatcccaat
     1141 tcttgggaga actctgccaa cttggatgcc aatatcaaag tcaacagcct ggctttgtcc
     1201 gacaccttgg gcttcgtgga taacaaatac cgcctgactt tgggcggacg tttccaagcg
     1261 gttgaataca ccaataagaa aaaatcacag agcggcgatg ccaaacgctt cagcccgatg
     1321 ctgatggcgg cgtgggtgcc gcaacctgat ttggttgtgt acggcaacta tatggaagac
     1381 ttggagcctg ccgatatcaa aaccgatgat tccggcgaaa cgacaatggc gaaaccgcgt
     1441 gtcagccgtc agtttgaagt gggcgtgcgt aaaaactggg gcaatttcgt aaccacgtta
     1501 aacgcgttcc aaatcaaacg cccgggctac tggcgcggtc atacaactac caagacaaca
     1561 aaaggggtaa caacaacgct gacctatggc aacaattccg atttcgcccg ctataaggcg
     1621 caaggcggcg cggccggcga cgagcaaggt atggaacgca atcgcggtat tgagttcaac
     1681 acctacgcga acttgctcaa caatactttg cgtccgactt tgggtctgat gtatctgcaa
     1741 tcgaccgtga aagagtatcc aaattcacgc gatatgctgg ttaacggcgt acaagtcgcc
     1801 aatccgcgcg taattgccaa agcaggtttg gaatgggata caccgtttgc caaaggattg
     1861 actttaaacg gtaatgtttc gtatttcggc aagtcttacc aagacacgca aaaacaatac
     1921 gctttcccgt cttacacttt ggttgacgta ggcgcgcgct acaaaaccaa gctcggcaaa
     1981 aatacgttga ccgtcagcag ctcggtggaa aacctgttca acaaaaacta ctggcaggta
     2041 cagcgcggcc aatacgaccg cagcttcgcc gtcgtcggta tgccgcgtac ttactggttg
     2101 aaagcggaat tggatttctg atttctccgc atccggaaaa tgccgtccga acaggtttca
     2161 gacggcattt cttttaaaga aatatggcgg gatatgctta aataatgcta ttctagcgtc
     2221 tttgaaacct gcttgtttga agtgatgaaa aaacctttga tttcggttgc ggcagcattg
     2281 ctcggcgttg ctttgggtac accttattat ttgggtgtca aagccgaaga aagcctgacg
     2341 cagcagcaaa aaatattgca ggaaacgggc ttcttgaccg tcgaatcgca ccaatatgag
     2401 cgcggctggt ttacctctat ggaaacgacg gtcatccgtc tgaaacccga gttgctgaat
     2461 aatgcccgaa aatacctgcc ggataacctg aaaacagtgt tggaacagcc ggttacgctg
     2521 gttaaccata tcacgcacgg cccttttgcc ggcggatttg gcacgcaggc gcacattgaa
     2581 accgagttca aatacgcgcc tgaaacggaa aaagttttgg aacgcttttt tgggaaacaa
     2641 gctccggttt cccttgccaa taccgtttat tttaacggca gcggtaaaat ggaagtcagt
     2701 gttcccgcct tcgattatga agagctgtcg ggcatcaggc tgcattggga aggattgacg
     2761 ggaaaaacgg tttatcaaaa aggtttcaaa agctaccgca acagctatga tgcgcccttg
     2821 ttcaaaatca agctggcaga caaaggcgat gccgcgtttg aaaaagcgca tttcgattcg
     2881 gaaacttcag acggtatcaa tccgcttgct ttgggcagca gcaatctgac cttggaaaaa
     2941 ttctccctag aatggaaaga gggtgtcgat tacaacgtca agttaaacga actggtcaat
     3001 cttgttaccg atttgcagat tggcgcgttt atcaatccca acggcagcat cgcaccttcc
     3061 aaaatcgaag tcggcaaact ggctttttca accaagaccg gggaatcagg ctcatttatc
     3121 aacagtgaag ggcagttccg ttttgacacg ctggtgtacg gcaatgaaaa atacggcccg
     3181 ctggacatcc atatcgccgc cgaacatctc gatgcttctg ccttaaccgt attgaaacgt
     3241 aagtttgcac aaatttccgc caaaaaaatg accgaggaac aaatccgcaa tgatttgatt
     3301 gccgccgtca aaggcgaggc ttccggactg ttcaccaaca atcccgtatt ggacattaaa
     3361 acttttcgtt tcacacagcc gtcgggaaaa atcgatgtgg gtggaaaaat catgtttaaa
     3421 gacatgaaga aggaagattt gaaccaattg ggtttgatgc tgaagaaaac cgaggcagac
     3481 atcagaatga gtattcctca aaaaatgttg gaagacttgg cggtcagtca ggcaggcaat
     3541 attttcagcg tcaatgccga agatgaggcg gaaggcaggg caagtcttga cgacatcaac
     3601 gagaccttgc gcctgatggt ggacagtacg gttcagagta tggcaaggga aaaatatctg
     3661 actttgaacg gcgaccagat tgatactgcc atttctctga aaaacaatca gttgaaattg
     3721 aacggtaaaa cgttgcaaaa cgaaccggag ccggattttg atgaagccgg tatggtttca
     3781 gagccgcagc agtaatgggt caaatgccgt ctgaaatgtt caggcggcat tttgttgtat
     3841 tggaaactgc cgttttcaac cattccttta gataagccgt gtcggatt
//
LOCUS       DAXHKG010000153         3871 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.153, whole genome shotgun sequence.
ACCESSION   DAXHKG010000153 DAXHKG010000000
VERSION     DAXHKG010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.153"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(83..277)
                     /locus_tag="ACFMWP_001860"
     CDS             complement(83..277)
                     /locus_tag="ACFMWP_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HFC5892407.1"
                     /translation="MKHKLSSWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(267..2348)
                     /locus_tag="ACFMWP_001861"
     CDS             complement(267..2348)
                     /locus_tag="ACFMWP_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HFC5892408.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DSKQPEAQSEA"
     gene            2824..3204
                     /locus_tag="ACFMWP_001862"
     CDS             2824..3204
                     /locus_tag="ACFMWP_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HFC5892409.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGRRGYMPPVQNQAGPNDF
                     RAFSCENGLSVRVRRLDGGKIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3337..3830)
                     /locus_tag="ACFMWP_001863"
                     /pseudo
     CDS             complement(3337..3830)
                     /locus_tag="ACFMWP_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
BASE COUNT          913 a          959 c         1094 g          905 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactatat tataaaaatt ccgtctgaag cggcgttcag
       61 acggaatttg tttcaagcag gcttaacagc agcgtccgcc gtttgcgccg cagcgacgtt
      121 tgcggcaata gtcttgaaac tgcagcttgg tcatcacagg ggcgttggga ttatgtttgc
      181 gctgctgtgc aacgtagttt tcataatcgg gcacgcctgc catcaagttt gctgtcagct
      241 tgatggtttt ccaccaagac gagagcttat gcttcacttt gtgcctccgg ctgtttgctg
      301 tcgcggtaca ccgccgggat ttctttggcg gtcggccagc cgactttgcg tgctttgagg
      361 gcggtacgca aaccgtacgc ggcgacaatc acgacaaccg acaagaagag gatggtcaga
      421 ccggcattaa tcttgtcgtt gaagatgatt tgcgccattt cgccgatgtc tttggcaggc
      481 gcaaggactt cgtttttagc caatgcgtcg ctgtatttgc cggcgtgggc aaggaagctg
      541 atgcgcgggt cgctgtggaa cagtttttgc aggccggcgt agcaggttac gaacagtacg
      601 ccgacggcgg gaacgagtac cacccaaaca taacggtcgc gtttcatctt aatcagcacc
      661 acggcgcaca taatcaaggc cacgcctgcc agcatttggt tggcgatgcc gaacaaaggc
      721 cagagcgagt tgatgccgcc cagcgggtcg gttacgccgg tgtagaggaa gtagccccac
      781 aatgccacgg cgaagaaggt cgcaatcagg ttggcgggga tggagtcggt gttgccgaaa
      841 ggtttgtaga agatgctgcc caagtcttga atcataaaac gtgcgacgcg cgtaccggca
      901 tcgacggcgg tcaggatgaa caaggcttca aacaataggg cgaagtgata ccagaacgcc
      961 atcatcgcct cgcccggaat caggcggctc ataatgtgcg ccataccgac tgcgagggtt
     1021 ggcgcaccgc ctgcacggga aaggatggtg ttttcgccca cttccttagc ggtatgcaac
     1081 agggttgccg catcgacagg gaattgcagc ttggtggtaa tcacttcggc ggcggtgttg
     1141 gcatccgtac cgatcagggc ggcagggctg ttcatggcga agtacacgcc gggatcaagc
     1201 gatgcggcgg cggcaagcgc cataatggct acgaaacttt ccatcaacat accgccgtaa
     1261 ccaatcatac ggacgtgggt ttcgttttcc agcattttcg gcgtggtgcc ggaggaaatc
     1321 agcgcgtgga agcccgaaac cgcaccgcag gcgatggtga tgaagaggaa cgggaacaat
     1381 gcgcctgaga ataccggacc cgaaccgtcg ataaagtggg ttacggcagg catttgcaaa
     1441 gtgggattga cgatgacgat gcccaaagcc aaggccgcaa tcgtaccgat tttcaggaag
     1501 gtggagagat agtcgcgcgg agtgagcagc aaccatacgg gcaatacgga ggcgacaaag
     1561 ccgtaaatca taatcgccca agtgagctgg atgccgtcaa ggtcgaacca atgtccgatg
     1621 gaacttttcg ccacatcttc gccgtaaatt accgccagca tcagcaaaat aaagccgacg
     1681 atggaaatct cgccgatttt gcccggacgg atatagcgcg tgtaaatacc cataaacagg
     1741 gcaatcggca tagtggcggc gatggtaaac gtaccccaag ggctgtgaac aagtgctttt
     1801 acgacaatca acgccaacac cgccataatg atgaccataa tcatcaaaat accgatggag
     1861 gcaatcacgc cggggacagt gccgagttcc tgtttcacaa tatcgcccaa agacttaccg
     1921 tcacggcgca tagaaacaaa cagtaccatc atatcctgta ccgcgccggc aaaaaccacg
     1981 ccgaagataa tccacaaagt accgggcagg taacccattt gcgcagccag tacagggccg
     2041 accaaagggc ccgcgccggc aatcgcggca aagtggtgtc cgaacaatac gcccttgtgc
     2101 gtcggaacgt agtccaagcc gtcgttgtgg cgttctgccg gagtcaggcg gttaggatcg
     2161 agccgcatta cgcggttggc gatgtagagg ctgtaaaaac ggtaggcgat gcagtaaacg
     2221 gatatggcgg cggtaaccat ccataccgcg ctgacctgtt cgcctcggct gagagccaga
     2281 gtggtaaagg atgctaagcc gaccagtacc actatgcccc aaatgaggaa ggttttgagt
     2341 gatttcatcg aataaatcct tatctcacac tgtcggaata tgcctgaacg gcgggaaacg
     2401 gatgaccgcc tgccggcacg ggcacaaacc ggagtctgaa tgattgacga agtatgaaac
     2461 agtgcgcttg tcgggatttg tgccttatgc ccgcatcaaa cagtgcaggg atgcgggcgc
     2521 acaaaacgtt aaacgccgaa taggatttta acgcaaatta gcacactgat agcggttttt
     2581 acttggaatt tggaaaaaat ttacattcct tcgggcggac aggcgggttt ggatggcatc
     2641 gtcaggcaaa aggcggcgcc ggaagacggg taaagaaggg gcgcgcaatc cggattattg
     2701 attcatcgcg ggtaaattcc ggttatcggg cttgtgtgtt tgcgcgtccg tttatagtat
     2761 ggcgttgccg cagcttggaa tcagggcggt tgtttcatat cttattttta ttggggagct
     2821 tttatgaata tcaggttttt cgcgctgacc gtaccggttt tgtctttggc ggcctgtgcc
     2881 gtgccggagg cgtatgatga cggcagacgc gggtatatgc cgcctgttca aaaccaagcc
     2941 ggcccgaacg attttcgggc gttttcatgc gagaacggtt tgtctgtgcg cgtccgccgt
     3001 ttggacggtg gcaaaatcgc gttgcggctg gacggcaggc gtgccgtcct ctcttccgac
     3061 gttgccgcat ccggcgaacg ctataccgcc gaacacggtt tgtttggaaa cggaaccgag
     3121 tggcaccaga aaggcggcga agcctttttc ggctttaccg atgcctacgg caattcggtc
     3181 gaaacttcct gccgcgcccg ttaaacgggg cagcctgttt gaaccgccgt ccggattttt
     3241 cgggcggttt tttgtgtcgg atttgttttg gctgtcggct ggtttcggcg gttttcgggc
     3301 gtggcggatt atttttcgtt tcgttccggg tttatcctat cggcagcggc tcaatgccaa
     3361 ctttaaacct gctccgattt cttcagggct gttatccaat gataaaatga catcgtctgc
     3421 atcaatggca tcccacgctt ccagcttgac atggcggctc gggctgattt tcaggcagcc
     3481 gttgtgcagc caaatatccc cgctcatcat gtttttaaat agggcgcgtc tggttttata
     3541 gcccaagttc ccgcatagtt tggcaaccca atcctcatag cgttgccgaa atttttcggt
     3601 atcaaaaaaa tcttggtctt ccgaactgtc ataaacgaaa gtcctgctgt ttgccaacgc
     3661 ttgcaagacc gtcgtgccta aagtttcatt gtcggtatcc aatggcagga tatgggggga
     3721 tataggtggt ctattgccgt taaccccaaa cctgaacatg tttgaacaat cagagcttct
     3781 tcattagcat aaaaaactgc ccaataattt tgatcctgtt taaaaattat tatttgatct
     3841 ccgtaatttt gattgtatag tggattaaca a
//
LOCUS       DAXHKG010000154         3861 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.154, whole genome shotgun sequence.
ACCESSION   DAXHKG010000154 DAXHKG010000000
VERSION     DAXHKG010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.154"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="ACFMWP_001864"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="ACFMWP_001864"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HFC5892410.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="ACFMWP_001865"
     CDS             1439..1924
                     /locus_tag="ACFMWP_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HFC5892411.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACFMWP_001866"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACFMWP_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HFC5892412.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVGTLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          784 a          943 c         1079 g         1055 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cttcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 ccgtcagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataag
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgccga tgtcaaacct
      661 gaggacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggcgcg
      721 ataccgcgtt gggtgttgtt aagtgcggct ttgcccgaat tggatgaggt atggctggaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcattgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgt ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgtgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcaaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccagc ggtcgtgcga
     2161 aatcaccatc acgctgccgg caaattccag caatgcgtct tccaacgcgc gcagggttcc
     2221 cacgtcgagg tcgttggacg gttcgtccag cagcaacaca ttgccaccgc ccaacaaggt
     2281 ttttgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 agaatcgggc tgctctttgc ccgcaatcat tttaaacagt gtcgatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacatt cacaaattca atcacttcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgtgttacc gcaacgactg taccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 agattccgcg tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gtttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattat cgattttggc
     3181 atcccattcc ggcaggcgca gcgcgtcggc ggcgatttcc aattcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg caataatcgc ttccaagcgg ccctgctctt ctgccaacgc
     3301 gtcaaaatcc gcatcaggat tggcgtactc ggcatacact tcttccaaac gtttctgcgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggtttttt caggatcaag
     3421 ctcaggctct tgcggcaggt agccgatttt aatgccgccc atcggcacgg cttcgccctc
     3481 aaattcctta tccacacccg ccataatccg cagcacggtg gacttgcccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgcttacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgccta
     3781 tccctttgaa attatacaga caaaaaaaat aataatgata ggagatcgcc gcaccggcaa
     3841 ccatttcgga ttttccaaag c
//
LOCUS       DAXHKG010000155         3851 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.155, whole genome shotgun sequence.
ACCESSION   DAXHKG010000155 DAXHKG010000000
VERSION     DAXHKG010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.155"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(88..906)
                     /locus_tag="ACFMWP_001867"
     CDS             complement(88..906)
                     /locus_tag="ACFMWP_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC5892413.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTGLSDRLPLSVLTGSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDISRNFSL"
     gene            complement(973..2223)
                     /locus_tag="ACFMWP_001868"
     CDS             complement(973..2223)
                     /locus_tag="ACFMWP_001868"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC5892414.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAVRIWPS
                     HTYTRLTLESTTALKYQHFTLDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRNIR
                     AGQNTPDTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="ACFMWP_001869"
     CDS             complement(2220..2681)
                     /gene="tsaE"
                     /locus_tag="ACFMWP_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HFC5892415.1"
                     /translation="MSDFPPVSRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGGGRKCLLTAHTERGRESLPL"
     gene            2871..3683
                     /gene="murI"
                     /locus_tag="ACFMWP_001870"
     CDS             2871..3683
                     /gene="murI"
                     /locus_tag="ACFMWP_001870"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HFC5892416.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          847 a          966 c         1136 g          902 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggtgtg tccactgtgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcgggaaa tatccatatc
      121 aggctgggga ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggag aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatgcagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaaag gattttctat tttgggagct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttagataa aggggtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttcgg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggctcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactat atacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gcccgttaaa acagataaag gaagccgatc ggacaatccg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacta
      961 ccgccttttc aatcaacccc gcttcaatac ggatgtattg atgtagcgtt ggacacccga
     1021 ggcaatggat tgggcgcact gccggcggaa ggattcgctg cccagcaact tctcttcagc
     1081 agggttggac aggaaggcgg tttcgaccag gatagacggc atatcgggtg cgcgcaaaac
     1141 ggcgaaattg gcttcgtcca ccctgccttt gtgcaagtgg ttgagcctgc ccaattcttc
     1201 aagcaccagt ttgccgagtt tgcggctgtc gcgcagcgtg gcggtttggg tcatatcgag
     1261 cagggcggta tcgacgttgc ggttgccgct ggtcggtacg ccgccgaccg cgtcggcatt
     1321 gttttgcgtc tgttccaaga atttggcggc ggagctggtc gcgcctttgg tgttcagcat
     1381 atagaccccc gttccgcgcg cggaggggct ggtgaaagcg tcggcgtgga tggagacgaa
     1441 tacgtccgcc cgccgtgctc gccctttggc gacacgcacg cccaatggga tgaacacgtc
     1501 ttcgttgcgc gtcataaaga cgttgtaacc caaggcttcc aattgttttt tggtttcgcg
     1561 ggcgatggag aggacgacgt gtttttcctg caaaccgccc gggctgacgg cgccggggtc
     1621 ttcgccgccg tgtccggggt cgatcataat gacgggtctg cgcccgtttt tgccgcgttc
     1681 ggtttgtgcg ggagtgtttt gagcgaggtc ggcttcaggg gagccgcgac gggttttgtt
     1741 caggctgccg ttaagcagcg ccatcatcgg atcgtcggga tccatccctt gcggatagag
     1801 atcgacgacg aggcggtttt taaagccgcc gacggggggg agggaaaaaa cttgcgcgta
     1861 ggaaggctgt ttcaaatcga tgacgaggcg gacggtgtcg ggcgtgttct gaccggcgcg
     1921 tatattgcgg ataaaggggt cgtccgccat aaccttctga gacagtccgt gcaatacggt
     1981 attgatgttc gcgttttgta tgtcgacgac caacctgccc gggttgtcga gcgtgaagtg
     2041 ttggtatttg agcgcggttg tgctttccag cgtcaggcgg gtgtaggtgt gcgacggcca
     2101 tatccgtacg gcggtaaact gcggggcgcg taccgttttg gcaacggcgg atgcgatggg
     2161 gcttagggcg aacagtgtgc cggcggtgcg gcggatgatt tgtcttcgtg tcagtttggt
     2221 catagcggca ggctttcgcg tcctcgttcg gtatgggcgg tcagcaggca ttttctgccg
     2281 ccgccgtcgt gtgtcaatgt tgcggtgatg tcggcgggcg gggtaaattc gcctccctgt
     2341 tgcggccatt cgatcaggca gacgctgttt gcggcaaaca gttcgtcaag ccccgcgtct
     2401 tcccattctt cggggaacga gaagcggtag aggtcgaaat ggtgcagggt gaagcgttcc
     2461 agcggataag attcgacgat ggcgtaggtc gggcttttga ctgcgccctg atgacccaat
     2521 ccgcgcagga tgccgcgtgt cagcgtggtt ttgcccgcac ccaaatcccc ttcgagataa
     2581 atgaccagcg gtgcgtttaa acgggaagac cacgccgcac ccaaatcgag tgtggcggct
     2641 tcgtcggcaa ggaatcggga aacgggagga aaatcagaca taggggcttt acaactttta
     2701 tgtggcggat cggaggggca ggcggtcggc aaaccgtgcg cccggcggca gcattgccgt
     2761 acattataac agccaaatcc gcatcctgct ttcagacggc aacggctgtc aagaaaaagc
     2821 ggcgcgtgta caatacgcgg attgtatgtt taggacggat tggaaaaaga atggaaaata
     2881 tcggcaggca gcgacccatc ggcgtttttg actcgggaat cggcggtttg accaatgtgc
     2941 gagcgctgat ggaacggctg ccgatggaga acatcattta tttcggcgac acggcgcgcg
     3001 tgccttacgg gacgaaatct aaggcgacca tcgaaaattt ctcgatgcag attgtcgatt
     3061 ttttattgga acacgatgtc aaggcgatgg ttatcgcgtg caatacgatt gcggcggtgg
     3121 cggggcagaa aatccgtcaa aaaaccggca atatgcccgt tttggacgtg atttccgccg
     3181 gcgcgaaagc cgcgctggca acgacgcgca acaataaaat cggcattatc gccaccaata
     3241 cgacagtcaa cagcaacgcc tatgcgcgcg ccatccacag gaacaacccc gatacgctcg
     3301 tccgcacgca ggccgcgccg ctgctcgtcc ctttggtgga ggaaggttgg ttggaacatg
     3361 aagttacccg cctgaccgta tgcgaatacc tcaaaccatt gcttgcggac ggcatcgata
     3421 cgctggtgtt gggctgcacg cactttccct tgctcaaacc cttaatcggc agggaggcgc
     3481 acaatgtcgc actggtcgat tccgcgatta cgactgccga agaaaccgca cgcgtccttg
     3541 cgcaggaggg attactcaat accgacaaca acaatcccga ctaccgtttt tatgtcagcg
     3601 atattccttt gaaattcaga accatcggcg agcgttttct gggcaggacg atggagcaga
     3661 ttgaaatggt gtctttgggt tagcggcagg tacggacgga aaccgtcccc gtccgcgcca
     3721 tccgcatacg cacccgcaac gccctgccgt attaaacgcc ccgtcgccgc aaatgccgtc
     3781 tgaaaggctt cagacggcat tttttacaca attcccaccg tttcccatcc ttctcgatac
     3841 actgtaatct c
//
LOCUS       DAXHKG010000156         3827 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.156, whole genome shotgun sequence.
ACCESSION   DAXHKG010000156 DAXHKG010000000
VERSION     DAXHKG010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.156"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            98..1123
                     /gene="hupA"
                     /locus_tag="ACFMWP_001871"
     CDS             98..1123
                     /gene="hupA"
                     /locus_tag="ACFMWP_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupA"
                     /protein_id="HFC5892417.1"
                     /translation="MKYKALSLLPLAAALAACAGGGVAEPHIPVSIPTATPLPTGEVK
                     LSDDNSKIENINTAGTGSTSGISIQQREVEKEPFPGYKTKETSFIFQTPGGAQYALSS
                     YADPITVSYSSPDFKIPDRHAGQRLADGSRIFICCSESGATSYAEITKQDYMKFGAWI
                     GPNGEIDLFAGGFPVGKTPKPAYSWSDDTPETQGKGKITYQVWGIRVKDGQFVTSSYT
                     PPKGSSFTGYTNTPVLSFITANFNSNKLAGEIRGNSDYGPSVKIENATIDGLSFSGDA
                     TSGGKNGKLEGKFFGKFNSTRSSDTGIGGKITFKDDRSLDTVFGGVIYEKKLDDKTSQ
                     DTNHLKK"
     gene            1154..3580
                     /gene="hupB"
                     /locus_tag="ACFMWP_001872"
     CDS             1154..3580
                     /gene="hupB"
                     /locus_tag="ACFMWP_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HFC5892418.1"
                     /translation="MPIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQSFNKYQTYVATGVARSQPDPQEWVNKSTLFKLGY
                     NFNDRNRIGWIFEDSRTDRFTNELSNLWTGTIYSPATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINSEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFVKLYDPKILTSNQAKITMLIENRSK
                     YKFAYWNNVFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAKNW
                     ELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSDNPNKPTYAPLSDGTALVSSPVW
                     QNQNRTAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALSP
                     WTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
BASE COUNT         1050 a         1190 c          878 g          709 t
ORIGIN      
        1 cgatttttgc accgacccac aaaaccagtt gacatcatat aacatttaaa ctgataatca
       61 aaactattat taacacatca tcaagattga gtatgcgatg aaatacaaag ccctgtcctt
      121 actgccgctt gccgccgccc ttgccgcctg tgcagggggg ggggtagccg aaccgcacat
      181 ccccgtgtcc atccccaccg ccaccccgct gcccaccggc gaggtaaagt tatcagacga
      241 caatagcaaa atcgaaaaca tcaacaccgc cggcacagga agcacatccg gtatttccat
      301 tcagcagcgg gaagtagaaa aagaaccttt ccccggctac aaaaccaaag aaacatcatt
      361 catcttccaa acacccggcg gcgcgcaata cgccctttca tcctacgccg accccataac
      421 cgtcagctac tcctcccccg atttcaaaat tcccgaccgc cacgcagggc agcggcttgc
      481 cgacggcagc cgcatcttta tctgttgcag cgaatccggg gctacttcgt atgcggaaat
      541 caccaaacaa gattatatga aattcggggc gtggataggt cccaacggcg aaatcgacct
      601 cttcgccggc ggcttccccg tcggcaaaac gccgaaaccg gcatactcct ggagcgacga
      661 cacgcccgaa acccaaggca aaggcaaaat cacttatcag gtttggggca tccgcgtcaa
      721 agacgggcaa tttgttacct cctcttatac gccgcccaaa ggcagctctt ttaccggcta
      781 caccaacacc cccgtccttt cctttatcac cgccaatttc aacagcaaca aactggcagg
      841 cgaaatccgc ggcaacagcg attacggacc gagtgtgaaa attgaaaacg caacgattga
      901 cggactatcc ttttccggcg atgccacgtc cggcggcaaa aacggcaaat tggaaggcaa
      961 gttttttggc aagttcaaca gcacccgcag cagcgacacc ggcataggcg gcaaaatcac
     1021 ttttaaagac gaccgctccc tcgataccgt attcggcggc gtgatttatg agaaaaaact
     1081 tgatgacaaa accagtcaag ataccaacca tctcaaaaaa taataaccca tccgctttta
     1141 aaaaggtttt cttatgccca tcccctttaa acccgtattg gctgccgccg ccatcgccca
     1201 agcgtttccc gcctttgcgg cagaccccgc gccgcagtcc gcccaaacgc tgaacgaaat
     1261 caccgttacc ggcacgcaca aaacccaaaa actcggcgaa gaaaaaatcc gccgcaaaac
     1321 tttagacaag ctcttggtca acgacgaaca cgacctggtg cgctacgacc ccggcatttc
     1381 cgtcgtcgaa ggcggcaggg cgggttctaa cggctttacc atacgcggcg tggacaaaga
     1441 ccgcgtcgcc atcaacgttg acgggctggc gcaggcggaa agccgctctt ccgaagcctt
     1501 ccaagagttg ttcggcgcgt acggcaactt caacgccaac cgcaacacct ccgagccgga
     1561 aaacttttcc gaagtaacca tcaccaaagg cgcggactcg cttaaatccg gcagcggcgc
     1621 attgggcggc gcagtcaatt accaaaccaa atccgcaagc gattatgttt ccgaagacaa
     1681 gccctaccat ttggggataa agggcggcag cgtcggcaaa aacagccaaa aattcagcag
     1741 catcaccgcc gccggcaggc tctttggttt ggatgcctta ttggtttata cccgccgctt
     1801 cggcaaagaa accaaaaacc gctcgaccga gggcgatgtc aaaattgaaa acaagggata
     1861 tgttttcagc ccaacccaat cattcaacaa gtaccagacc tacgtagcca caggggttgc
     1921 gcgctcccaa cccgacccgc aagaatgggt aaacaaaagc accttgttca agctgggcta
     1981 caatttcaac gaccgcaacc gcatcggctg gatttttgaa gactcccgca ccgaccgttt
     2041 taccaacgag ctgtctaatt tgtggacggg tacaatttac tctcccgcaa cgggcgacta
     2101 ccgccaccgc caagacgtga gctaccgccg ccgctccggc gtcgaataca aaaacgaatt
     2161 ggaacacggc ccgtgggaca gcctcaagct gcgctacgac aagcagcgca tcgatatgaa
     2221 cacttggact tgggacatcc cgaaaaatta cgatttgcgc ggtatcaaca gtgaagttta
     2281 ccattcgttc cggcatatcc gccaaaacac cgcgcaatgg actgccgatt ttgaaaaaca
     2341 actcgacttt tccaaagccg tttgggcggc gcaatacggc ttgggcggcg gcagagggga
     2401 caatgccaac tcggattaca gctatttcgt aaaactttac gaccccaaaa tcctcacttc
     2461 caaccaagcc aaaatcacaa tgctgatcga aaaccggtcg aaatataaat ttgcctattg
     2521 gaacaatgtg tttcacttgg gcggcaacga ccgcttccgc ctgaatgcgg gcatacgcta
     2581 cgacaaaaac agcagcagcg cgaaagacga tccgaaatac accaccgcca tccgggggca
     2641 gattccccat ttgggttcgg aacgcgcgca cgcgggcttc agctacggca cggggttcga
     2701 ctggcggttt accaagcatc tgcacttgtt ggcaaaatac agcaccggct tccgcgcacc
     2761 gacttcggac gaaacctggc tgctgttccc acaccccgat ttctacctga aagccaaccc
     2821 aaacctgaaa gccgaaaaag ccaaaaactg ggaattgggt ctggcgggca gcggcaaagc
     2881 gggcaacttc aagctctcgg gcttcaaaac caaataccgc gactttatcg aattgacgta
     2941 tatgggcgtt tcgtcagaca accctaacaa gcccacctac gccccgcttt cagacggtac
     3001 ggcattggtc agctcgcccg tttggcaaaa ccaaaaccgc accgccgcct gggtgaaagg
     3061 catagagttt aacggcactt ggaacctcga cagcatcggt ttgcccaaag ggctgcacac
     3121 cggcctcaac gtcagctaca tcaagggcaa ggcaacgcaa aacaacggca aagaaacgcc
     3181 catcaacgcg ctttcgccgt ggacggcggt ttacagcctg ggctatgacg cgccttccaa
     3241 acgttggggc atcaacgcct acgccacgcg caccgccgcc aaaaagccgt ccgacaccgt
     3301 acacagcaac gacgacttga acaacccgtg gccttatgcc aaacacagca aggcctatac
     3361 gctgttcgac ctttccgcct acctcaacat cggcaaacag gttacgctcc gcgctgccgc
     3421 gtacaacatt accaacaagc agtactacac ttgggaatct ttacgcagca tccgcgagtt
     3481 cggtacagtt aaccgcgtcg acaacaaaac ccatgccggc atccaacgct ttacctcgcc
     3541 gggcaggagc tacaatttca ccatcgaagc gaagttctaa gctcctgatg tgccaatgcc
     3601 gtctgaaacc cgatgatttg ggtttcagac ggcatttttt acggtcgcac cgccgccccc
     3661 tttcaggctt gtaccaagcc caatcccgca actctccgtc attcccacgg aagtgggaat
     3721 ctagaaacgc aaagctgcaa gaatttatcg gaaatgactg aaactcaacg aacctggatt
     3781 cccgcctgcg cgggaatgac gaagccatcc gcacggaaac ctgcacc
//
LOCUS       DAXHKG010000157         3801 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.157, whole genome shotgun sequence.
ACCESSION   DAXHKG010000157 DAXHKG010000000
VERSION     DAXHKG010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3801
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.157"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            354..3557
                     /gene="nalP"
                     /locus_tag="ACFMWP_001873"
     CDS             354..3557
                     /gene="nalP"
                     /locus_tag="ACFMWP_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HFC5892419.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGTSAPDFNAGG
                     TGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHT
                     GDFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNE
                     NYKNYTAYMRKEAPEDGGGKDIKASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIG
                     GRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTT
                     SRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFI
                     FSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAP
                     YEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAV
                     GVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGS
                     QLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVYL
                     ADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGYL
                     NRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNA
                     ARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGI
                     RPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHN
                     GTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRSTWSE
                     NSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLM
                     QLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAG
                     LKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGL
                     GADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1029 a         1030 c         1009 g          733 t
ORIGIN      
        1 atagtacgga accgattcac ttgttaaaga atcgttctct ttgagctaag gcgaggcaac
       61 gccgtactgg tttttgttca tccactataa ctagggaaat tcaaattaag ttagaattat
      121 ccctatgaga aaaagccgtc taagccggta taaacaaaat aaactcattg agctatttgt
      181 cgaaagttca aatttccatt ttaaaacaat tagtaaaatc gagtttatcc tagttgtcca
      241 agacaacccc tataataata taattcaaaa tataaaaatg ggttacatct aaacattacg
      301 gaatttttat tccctcgcct gaattctatt gtcagattca aggagacctc atcatgcgaa
      361 cgaccccaac cttccctaca aaaactttca aaccggctgc catggcgtta gctgttgcaa
      421 caacactttc tgcctgctta ggcggcggcg gcggcacttc tgcgcccgac ttcaatgcag
      481 gcggcaccgg tatcggcagc aacagcagag caacaacagc gaaatcagca gcagtatctt
      541 acgccggtat caagaacgaa atgtgcaaag acagaagcat gctctgtgcc ggtcgggatg
      601 acgttgcggt tacagacagg gatgccaaaa tcaatgcccc ccccccgaat ctgcataccg
      661 gagactttac aaacccaaat gacgcataca agaatttgat caacctcaaa cctgcaattg
      721 aagcaggcta tacaggacgc ggggtagagg taggtatcgt cgatacaggc gaatccgtcg
      781 gcagcatatc ctttcccgaa ctgtatggca gaaaagaaca cggctataac gaaaattaca
      841 aaaactatac ggcgtatatg cggaaggaag cgcctgaaga cggaggcggt aaagacatta
      901 aagcttcttt cgacgatgag gccgttatag agactgaagc aaagccgacg gatatccgcc
      961 acgtaaaaga aatcggacac atcgatgtgg tctcccatat tattggcggg cgttccgtgg
     1021 acggcagacc tgcaggcggt attgcgcccg atgcgacgct acacataatg aatacgcatg
     1081 atggaaccaa gaacgaaata atgtctgcag ccatccgcaa tgcatgggtc aagctgggcg
     1141 aacgtggcgt gcgcatcgtc aataacagtt ttggaacaac atcgagggca ggcactgccg
     1201 accatttcca aatagccaat tcggaggagc agtaccgcca agcgttgctc gcctattccg
     1261 gcggtgataa aacagacgag ggtatccgcc tgatgcaaca gagcgattac ggcaacttgt
     1321 cctaccacat ccgtaataaa aacatgcttt tcattttttc ggcaagcaat gacgcacaag
     1381 ctcagcccaa cacactgacc ctattgccat tttatgaaaa agatgctcaa aaaggcatta
     1441 tcacagtcgc aggcgtagac cgcagtggag aaaagttcaa tggctccaac cattgcggaa
     1501 ttactgccat gtggtgccta tcggcaccct atgaagcaag cgtccgtttc acccgtacaa
     1561 acccgattca aattgccgga acatcctttt ccgcacccat cgtaaccggc acggcggctc
     1621 tgctgctgca gaaatacccg tggatgagca acgacaacct gcgtaccacg ctgctgacaa
     1681 cggctcagga catcggtgca gtcggcgtgg acagcaagtt cggctgggga ctgctggatg
     1741 cgggtaaggc catgaacgga cccgcgtcct ttccgttcgg cgactttacc gccgatacga
     1801 aaggtacatc cgatattgcc tactccttcc gtaacgacat ttcaggcacg ggcggcctga
     1861 tcaaaaaagg cggcagccaa ctgcaactgc acggcaacaa cacctatacg ggcaaaacca
     1921 ttatcgaagg cggttcgctg gtgttgtacg gcaacaacaa atcggatatg cgcgtcgaaa
     1981 ccaaaggtgc gctgatttat aacggggcgg catccggcgg tagcctgaac agcgacggca
     2041 ttgtctatct ggcagatacc gaccgatccg gcgcaaacga aaccgtgcac atcaaaggcg
     2101 atctgcagct gggcggcgaa ggtacgctgt acacacgttt gggcaaactg ctgaaagtgg
     2161 acggtacggc gatgaccggc ggcaagctgt acatgtcggc acgcggcaaa ggggcaggct
     2221 atctcaaccg taccggacaa cgtgttccct tcctgagtgc cgccaaaatc gggcgggatt
     2281 attctttctt cacaaacatc gaaaccgacg gtggtctgct ggcttccctc gacagcgtcg
     2341 aaaaaacagc gggcagtgaa ggcgacacgc tgtcctatta tgtccgtcgc ggcaatgcgg
     2401 cacggactgc ttcggcagcg gcacattccg cgcccgccgg tctgaaacac gccgtagaac
     2461 agggcggcag caatctggaa aacctgatgg tcgaactgga tgcctccgaa tcatccgcaa
     2521 cacccgagac ggttgaaact gcggccgccg accgcacaga tatgccgggc atccgcccct
     2581 acggcgcaac tttccgcgca gcggcagccg tacagcatgc gaatgccgcc gacggtgtac
     2641 gcatcttcaa cagtctcgcc gctaccgtct atgccgacag taccgccgcc catgccgata
     2701 tgcagggacg ccgcctgaaa gccgtatcgg acgggttgga ccacaacggc acgggtctgc
     2761 gcgtcatcgc gcaaacccaa caggacggtg gaacgtggga acagggcggt gttgaaggca
     2821 aaatgcgcgg cagtacccaa accgtcggca ttgccgcgaa aaccggcgaa aatacgacag
     2881 cagccgccac actgggcatg ggacgcagca catggagcga aaacagtgca aatgcaaaaa
     2941 ccgacagcat tagtctgttt gcaggcatac ggcacgatgc gggcgatatc ggctatctca
     3001 aaggcctgtt ctcctacgga cgctacaaaa acagcatcag ccgcagcacc ggtgcggacg
     3061 aacatgcgga aggcagcgtc aacggcacgc tgatgcagct gggcgcactg ggcggtgtca
     3121 acgttccgtt tgccgcaacg ggagatttga cggtcgaagg cggtctgcgc tacgacctgc
     3181 tcaaacagga tgcattcgcc gaaaaaggca gtgctttggg ctggagcggc aacagcctca
     3241 ctgaaggcac actggtcgga ctcgcgggtc tgaagctgtc gcaacccttg agcgataaag
     3301 ccgtcctgtt tgcaacggcg ggcgtggaac gcgacctgaa cggacgcgac tacacggtaa
     3361 cgggcggctt taccggcgcg actgcagcaa ccggcaagac gggggcacgc aatatgccgc
     3421 acacccgcct ggttgccggt ctgggcgcgg atgtcgaatt cggcaacggc tggaacggct
     3481 tggcacgtta cagctacgcc ggttccaaac agtacggcaa ccacagcgga cgagtcggcg
     3541 taggctaccg gttctgacgg acaggaagca gacagccgca aagatcacgg tctttgcggc
     3601 tgtttcttat gaaaagaaaa ccctattcca attgcctgct tctattgttt caagacttct
     3661 tccaaagatt cggcattaat cagatgtata gcggattaac aaaaatcagg acaaggcggc
     3721 gaagccgcag acagtacaaa tagtacggaa ccgattcact cggtgcttga gcaccttaga
     3781 gaatcgtttc tttgagctaa g
//
LOCUS       DAXHKG010000158         3792 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.158, whole genome shotgun sequence.
ACCESSION   DAXHKG010000158 DAXHKG010000000
VERSION     DAXHKG010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3792
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.158"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(370..1410)
                     /gene="queA"
                     /locus_tag="ACFMWP_001874"
     CDS             complement(370..1410)
                     /gene="queA"
                     /locus_tag="ACFMWP_001874"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HFC5892420.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVTVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGWNEGVVR"
     gene            1527..1784
                     /locus_tag="ACFMWP_001875"
     CDS             1527..1784
                     /locus_tag="ACFMWP_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HFC5892421.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPKHRQPLKEQKWICAN"
     gene            1766..2221
                     /gene="accB"
                     /locus_tag="ACFMWP_001876"
     CDS             1766..2221
                     /gene="accB"
                     /locus_tag="ACFMWP_001876"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HFC5892422.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKVGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            2333..3694
                     /gene="accC"
                     /locus_tag="ACFMWP_001877"
     CDS             2333..3694
                     /gene="accC"
                     /locus_tag="ACFMWP_001877"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HFC5892423.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIEAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIASGLPLQYKQKDIKIEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFNDPGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
BASE COUNT          924 a         1151 c          921 g          796 t
ORIGIN      
        1 aatttatctt ataaacaaac aaaggcagcc tgaaagattg aatggtctgc acccctaagg
       61 ttggactaac caaccgacta aggtgcagat tattttttgt tgctttttca gcttttcgtt
      121 gggttagata ttcttgccca ctgttttcag gcagccttga atacaaaaaa tggcgtatgt
      181 aatatgttta tacgaccaaa acggaatgaa ttttaacgta ttgcgcgtca tcaacaatga
      241 ctgagtttct cgcctctcgc gcctgaatct atgtcatata cagttccttt cattcaaatc
      301 aacaaaagaa tgccgtccga acgtccgttc agacggcact tgtcttcccg caatagactt
      361 ggggctgttc taacgtacca ccccttcgtt ccaccccaaa accatcgcat cgccgtagct
      421 gaagaaacgg tattcgcgtt cgaccgcata acgatacgcg gcgcggatat gacccatacc
      481 cgaaaacgcg ctgacaagca tcagcagcgt cgatttcggc aaatgaaaat tggtaaccag
      541 cctgtcgaca acattaaaac ggtagcccgg cgtgatgaaa atatcggtgt cgccctgccc
      601 cgctttcaga cgacccgtcg cacgcgcggc agattcgagg gcgcgcatgg aagtcgtgcc
      661 gactgcccag actttgttcc cccgggcttt tgccgcctca acggcggcgg cggtttcaga
      721 cggcacttca aaccattcgc tgtgcatttt atgctcttcg attttgtcca cacgcacggg
      781 ttggaatgtc cccgcaccga cgtgtagggt tacttctgcg gttactgcgc ctttgtcttt
      841 caggcggcgc aaaagttctt ccgtaaaatg cagacccgcc gtcggcgcgg cgaccgcgcc
      901 ctgatatttg gcataaacgg tttgataacg gctgtcgtca tccgcatcgg cggcgcgttc
      961 gatataaggc ggcaggggca ggtgtccgtt ctgttccaaa agttcgtaaa cggtttgacc
     1021 gccttcaaaa cgcaggcaga acagttcgcc ctcacgcccg accgtcacgg cgcggatgcc
     1081 gccttcaaac accagcccca taccgggctt gggcgatttg gacgaacgga tgtgcgccag
     1141 tgcggtatgg ttgtccaaca cgcgctcaat cagggcttcg atcctgccgc cgctgtcttt
     1201 ctgcccaaac agccgcgcct tcatgacttt ggtgttgttg aacaccaaaa cgtcgcccgc
     1261 ctcaacataa tccggcaaat cgccgaacac ccggtcttgc agcggcatat cgggcaacgc
     1321 aaccaaaagg cggctgctgc cgcgcacttc gggcggatgc tgggcaatca gcttttcggg
     1381 cagggtaaaa tcaaaatctg aaatatccat ttttacactc tcgttcgggc aagccgccat
     1441 tatacgcact ttagcccttt ttcagacggc atctttgtcc gaaaaaccaa cagattagaa
     1501 taaacactct taacccgggg catcttgtgc gcaaaatcaa acttcctgca catttccccc
     1561 aaaaaccgcc gttttttgat attttactgg acatttaccg acaacttcgg gaaaataaac
     1621 acattctcac ggtcgttttc caccacagga aaaccgtatc cgaacaccat tccgcccggt
     1681 ttgcgccgtt gccgcaagcc ggctgttttc tgaaaaacca acgcaacaac ccgccgaaac
     1741 accggcagcc tttaaaggaa cagaaatgga tttgcgcaaa ttaaaaaaac tgattgattt
     1801 ggttgaagaa tcgggtatcg ccgaaatcga agtaaccgaa ggcgaggaaa aagtccgcat
     1861 cacccgaacc atcgccgccg cacccgttta cgccgcgccc gtacctgccg ccgcgccggc
     1921 cgtaacgcct gccgccgcac ccgttgcggc atccgcgcct gccgccgcac ctgccgcccg
     1981 cgatttgtcc gacgcgcaaa aatcacctat ggtcggcacg ttctaccgcg cacccggccc
     2041 gaatgccgcg ccttttgtcg aagtcggcca acaggttaaa gtcggcgaca cgctgtgcat
     2101 catcgaagcg atgaagctga tgaacgaaat cgaagccgaa aaatccggca cggtcaaaga
     2161 aattttggtc gaaaacggta cgcccgtcga attcggcgaa ccgctcttca tcatcggata
     2221 atcctgtttt cagacggcat aaacttccga tgccgtctga aatgctttcc cccttcagcg
     2281 ttcccgcacc cttttttacg gacgggttgc cggaaccgca ggaaaggtca tcatgctgaa
     2341 aaaagtttta atcgccaacc gaggcgaaat cgcattacgc gtactccgtg cctgccgcga
     2401 aatgggcatt gccaccgtcg ccgtgcattc cgaggccgac aaagacagcc tgcacgtcaa
     2461 actcgccgac gaatccgtgt gcatcggccc tgccgcttcc gcgcaaagct acctcaacgt
     2521 ccccgccatt atcgccgccg ccgaagtaag ctgcgcggac gctgtccacc cgggctacgg
     2581 tttccttgcc gaaaacgccg atttcgccga acaggtcgag cagtccggct ttacctttat
     2641 cggcccgaaa cccgacacca tccgcctgat gggcgacaaa gtatccgcca aacacgccat
     2701 gatcgaagcg ggcgtgcctt gtgttcccgg ctctgacggc gcattgcccg acgacggcga
     2761 agaaatcctc aaaatcgccg ataaagtcgg ttatcctgtc attatcaaag cctctggcgg
     2821 cggcggcggt cgcggtatgc gcgtggtcga gaaaaaagaa gacctcctcc aatctgtcga
     2881 aatgaccaag gcagaagcag gcgcggcatt cggcaacccg atggtttaca tggaacgcta
     2941 tttgcaacgt ccgcgccacg tcgaaatcca agtgattgcc gacgaacacg gcaacgccgt
     3001 ctaccttgcc gaacgcgact gttcgctaca acgccgccac caaaaagtca tcgaggaagc
     3061 accggctccg ttcatcactg aaaaagaacg cgccaaaatc ggcaacgcct gtgccgacgc
     3121 ctgcaaacgc atcggctatc gtggcgcagg tacgtttgaa ttcctgtacg aagacggcga
     3181 atttttcttt atcgagatga atacgcgcgt tcaggttgag catccggtta ccgagctcat
     3241 caccggcgtg gacattgtgc aggagcaact ccgcatcgca tccggcctgc cgctgcaata
     3301 caagcagaaa gacatcaaaa tcgaaggcca cgcgtttgag tgccgtatca acgccgaaga
     3361 cccatacaac ttcatcccca gcccgggccc gattgaaagc tgccacctgc ccggcggctt
     3421 cggtatccgc gtcgacagcc acatttacca aggctaccgc atcccgcctt actacgacag
     3481 cctgatcggc aaaatctgcg tacacggcaa aacgcgtgaa caggcaatgg cgaaaatgcg
     3541 cgtcgcactc gccgagctgg cggtaaccgg catcaaaacc aatacgccgc ttcaccgcga
     3601 cttgttcaac gacccaggtt tccaaaaagg cggcgtcagc atccactatt tggaacactg
     3661 gctggaagat cgcaaagcca aacaggacaa ataagccgcc gccgatatgc cgtctgaaac
     3721 agtttgtccg ttttcagacg gcatttccct tgccccgcgc cgtctgaaac cgatttcgat
     3781 atagtggatt aa
//
LOCUS       DAXHKG010000159         3778 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.159, whole genome shotgun sequence.
ACCESSION   DAXHKG010000159 DAXHKG010000000
VERSION     DAXHKG010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.159"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..184)
                     /locus_tag="ACFMWP_001878"
     CDS             complement(<1..184)
                     /locus_tag="ACFMWP_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HFC5892424.1"
                     /translation="MKPDTLQSYGSTTRFLHWTIAACYLFMFATVIAWNIDENLKFLI
                     NSHKAVGILLLILSVWR"
     gene            400..864
                     /locus_tag="ACFMWP_001879"
     CDS             400..864
                     /locus_tag="ACFMWP_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HFC5892425.1"
                     /translation="MKENKVDEVFKTESAGYLMNHIARQFAILLGEGLKPLGIAPAQF
                     PILLELWQKDGLSQQELVERADLKQATIANTLARMERDGLITREPNPDDARSRLIMLT
                     EQARALQQQSTEIAQAINQTALSDLSANEQKLFLEMAAKIVARQQEMITGEK"
     gene            complement(979..1551)
                     /locus_tag="ACFMWP_001880"
     CDS             complement(979..1551)
                     /locus_tag="ACFMWP_001880"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFC5892426.1"
                     /translation="MLKLHLWNQSIYGVDAVIVTHTHEDHWGETAARSIPKNLPVYVQ
                     HQADAAKIRSQGFTDVRVLNGSTVFNGVTISKTGGVHGTEAMYANPQLAEILGDAMGV
                     VFQSSGHKTAYIMGDTVWTADVNKALNRYKPDYLIMNTGYALISGITVHMDTVNHTAV
                     SRTDMRKFIRGQGIESRVNVPEDGEILKLD"
     gene            complement(1571..2230)
                     /gene="ung"
                     /locus_tag="ACFMWP_001881"
     CDS             complement(1571..2230)
                     /gene="ung"
                     /locus_tag="ACFMWP_001881"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HFC5892427.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            2311..2718
                     /locus_tag="ACFMWP_001882"
     CDS             2311..2718
                     /locus_tag="ACFMWP_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HFC5892428.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIANP"
     gene            2733..3680
                     /locus_tag="ACFMWP_001883"
     CDS             2733..3680
                     /locus_tag="ACFMWP_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HFC5892429.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
BASE COUNT          928 a          935 c          971 g          944 t
ORIGIN      
        1 cgcgccaaac agacaatatc agcagcagga ttccgactgc tttgtgcgaa ttgattagaa
       61 atttcaggtt ttcgtcgata ttccacgcaa tgacggtagc gaacataaac aggtagcaag
      121 ctgctattgt ccaatgcagg aagcgggttg ttgagccgta gctttgcaaa gtgtcgggtt
      181 tcatgatgct ttctcttgat aaagggttag tcggatttcg gtatggctta cagataggaa
      241 aaccttcttt aaagtattga agttcataag tgttcttgaa catttaagat aggtcgtctg
      301 aaagtgttta gatagcaagc tattaagctg caataagtat agcgtgctat gtattaagat
      361 agcaagctat atttgtgata taatccgcaa caatttgatt tgaaagaaaa caaagtggac
      421 gaagttttca aaactgaatc ggcaggctat ttgatgaacc acattgcccg ccaatttgcc
      481 attttattgg gcgaaggttt aaagcctttg ggcatcgccc ccgcgcaatt tccgatattg
      541 ctggaactgt ggcaaaaaga cggtttgagc cagcaggaat tggtggaacg cgccgatttg
      601 aagcaggcaa cgattgccaa cactttggcg cggatggagc gcgacggact gattacgcgc
      661 gaaccgaatc ccgacgatgc gcgcagccgc ctgattatgc tgacggagca agctcgcgcc
      721 ttgcagcagc agtccacgga aattgcccaa gccatcaacc aaacggcttt gtcggatttg
      781 tcggcaaacg aacaaaagtt gtttttggaa atggcggcaa aaattgtggc gcgacagcaa
      841 gagatgatta cgggcgagaa gtgagggggc cgatggcgca acttggaatt ttaaagtgca
      901 ggctgctttt gaggtcgtct gaaagcagcc tgcgctttga aaacaaggtg caggctgctt
      961 agggtaatgt gtcgtttatc aatccagttt caggatttct ccgtcttctg gaacgttcac
     1021 acggctttca atgccttgac cgcgtataaa tttacgcata tcggtgcggc tgacggcggt
     1081 atgattcacg gtatccatgt gtacggtaat gcctgaaatc agcgcgtagc ccgtgttcat
     1141 aatcagataa tcgggtttgt agcggttcaa tgctttgttt acatctgccg tccacacagt
     1201 atcacccata atataagcgg ttttgtgtcc gctgctttgg aatactacac ccattgcatc
     1261 acctaagatt tcggctagct gcgggttggc atacatggct tctgtaccat gtacgccgcc
     1321 ggttttgctg atggttacgc cgttgaagac agtgctgccg ttcaacacgc gtacatcagt
     1381 aaatccttgg ctgcggattt ttgccgcgtc ggcttggtgc tgcacatata cgggcaggtt
     1441 tttcggaatg gaacgtgcgg cggtttcgcc ccaatggtct tcgtgggtat gggtaacgat
     1501 aactgcatcc acaccgtaga ttgactggtt ccataagtgc agtttaagca acttggcatt
     1561 cagacggcat tcacagcttc cagtttatcg gatcgatacc gtgccggctc aaatagctgt
     1621 ttgcctgtga aaaatggcgg cagccgaaaa aaccgcgata tgccgacaga ggagacggat
     1681 gcggtgcggt caatatcaaa tgattttgac tgtctatcag cctccctttt tgttgtgcat
     1741 acccacccca caacatgaag acaaggtgct tgcggtgtgt cgcaagctgc ctgatgacgg
     1801 tatcggtaaa gcgttcccag cctaaaaggg cgtgcgaatg cgcctgtcct gcacgcaccg
     1861 tcaaaaccgt gttcagaagc aatacgccct gctccgccca cgctgtcaga cagccgtgcg
     1921 cgggaatgga aaagccttcg atgtcggttt ccaactcctt gtagatattg agtaaagacg
     1981 gcggtatgcg gataccctgc cggacggaaa atgccaaacc gtgcgcctgc cctgccccgt
     2041 gatacggatc ttgtccgaga atgacggctt tgacccggtc gaacgctgtc aggcggaatg
     2101 cgttgaacac atccgccgcc ggcggataga tgatttgtcc cgacaaacgt tcctgcctga
     2161 ctgcatttaa aatttcctga aaatacggct gctgtttttc gccgccgagt gcatcgtgcc
     2221 aagtgtccat atctgcccta tcctttcaaa ttcggctata ctgctgatat tgcgttattt
     2281 tgtcaaacga cgcgctttgt ggggaaatgt atgactgtat ggtttgttgc cgctgttgcc
     2341 gtcttaatca tcgaattatt gacgggaacg gtttatcttt tggttgtcag cgcggctttg
     2401 gcgggttcgg gcattgctta cgggctgacc ggcagtacgc ctgccgccgt cttgaccgcc
     2461 gctctgcttt ccgcgctggg tatttggttc gtacacgcca aaaccgccgt gggaaaagtt
     2521 gaaacggatt catatcagga tttggatgcc ggacaatatg tcgaaatcct ccgacacaca
     2581 ggcggcaacc gttacgaagt tttttatcgc ggtacgcact ggcaggctca aaatacgggg
     2641 caagaagagc ttgaaccagg aactcgcgcc ctaatcgtcc gcaaggaagg caaccttctt
     2701 atcatcgcaa acccttaaca ctcggaggaa ttatggaatt tttcattatc ttgttggtag
     2761 ccgttgccgt tttcggcttc aaatcctttg tcgtcatccc acagcaggaa gtccacgttg
     2821 tcgaaaggct tggacgtttc catcgcgcct tgacggccgg tttgaatatt ttgattccct
     2881 ttatcgaccg cgtcgcctac cgtcattcgc tgaaagaaat ccctttagac gtacccagcc
     2941 aggtctgcat cacgcgcgac aacacccagc tgacggttga cggcatcatc tatttccaag
     3001 taaccgatcc caaactcgcc tcatacggtt cgagcaacta cattatggcg attacccagc
     3061 ttgcccaaac gacgctgcgt tccgttatcg ggcgtatgga gttggacaaa acgtttgaag
     3121 aacgcgacga aatcaacagc accgtcgtct ccgccctcga tgaagccgcc ggagcttggg
     3181 gcgtgaaggt tttgcgttat gagattaaag acttggttcc gccgcaagaa atccttcgct
     3241 caatgcaggc gcaaattact gccgaacgcg aaaaacgcgc ccgtatcgcc gaatccgaag
     3301 gtcgtaaaat cgaacaaatc aaccttgcca gtggtcagcg cgaagccgaa atccaacaat
     3361 ccgaaggcga ggctcaggct gcggtcaatg cgtcaaatgc cgaaaaaatc gcccgcatca
     3421 accgcgccaa aggtgaagcg gaatccttgc gccttgttgc cgaagccaat gccgaagcca
     3481 tccgtcaaat tgccgccgcc cttcaaaccc aaggcggcgc ggatgcggtc aatctgaaga
     3541 ttgcggaaca atacgtcgct gcgttcaaca atcttgccaa agaaagcaat acgctgatta
     3601 tgcccgccaa tgttgccgac atcggcagcc tgatttctgc cggtatgaaa attatcgaca
     3661 gcagcaaaac cgccaaataa gccgtgatga aaatgccgtc tgaagctctg ttttcggggt
     3721 tcagacggca tttttattta aacccgggca aggttgtatt ccgcttcaaa ttatagtg
//
LOCUS       DAXHKG010000160         3642 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.160, whole genome shotgun sequence.
ACCESSION   DAXHKG010000160 DAXHKG010000000
VERSION     DAXHKG010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3642
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.160"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(214..1278)
                     /locus_tag="ACFMWP_001884"
     CDS             complement(214..1278)
                     /locus_tag="ACFMWP_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC5892430.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRENRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIIH
                     NGIDTDRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTENIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAAH
                     QCVTARFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="ACFMWP_001885"
     CDS             complement(1279..2037)
                     /locus_tag="ACFMWP_001885"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC5892431.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YATYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="ACFMWP_001886"
     tRNA            complement(2112..2187)
                     /locus_tag="ACFMWP_001886"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3377)
                     /locus_tag="ACFMWP_001887"
                     /pseudo
     CDS             complement(2241..3377)
                     /locus_tag="ACFMWP_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3322..>3642)
                     /locus_tag="ACFMWP_001888"
     CDS             complement(3322..>3642)
                     /locus_tag="ACFMWP_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892432.1"
                     /translation="FGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSS
                     CDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKYSGLARTFPRIGSAT
                     GCAD"
BASE COUNT          830 a          880 c          959 g          973 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac gggcggtgac gcattgatga gctgccgttg ccagtgcgtt
      301 ttttgcttcg gggtttaaga cgaggcgttc gatttcgtcc gccaaagatt caggcgtaag
      361 cctatccagc agaatccccg attgatgatg ttcgacaatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caatgttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatcaggat gtccgtgccc tgccaatttg agtctgattt gaggatattt
      661 ccgatgcaat atcacacagg cttcaattag gttttccaat cctttttccg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaccg
      781 atcggtatcg ataccgttat gaataatccg gtatttttct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tctgtgtttt tctgtatcag
      901 gcggtggtaa aaatcggttt tgttggcgac gacattatgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggttttccc ggataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg gaaaagcgtc tgtgcatcaa
     1141 ctcattattt ttattgacgg cggtaaacat tgtgcagccc cgaagcccca atgcttttga
     1201 aacatcatag acatattgtt cgcccccacc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccagatttg tacagataat atagtttgac
     1321 atatttaatc atcgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 aagaaaccct ttgttcagaa tataaatttt gaaaaaaccc caaatcggac ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg agatggaagt
     1501 atatttgttg aacttgttga aatattgttc ccagttgtcg tacgtataat ggtacataaa
     1561 atgtttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct ttcttcggca tcaaacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ctcgacaaaa taggtggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccgttcaaa tgccgttgga agacttttgc acccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcgtcga taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcccgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc cccgaaggca
     2281 aacgatgagc tggcggcaat gcgtttttcg gtttcccagc ggctgccgct gccggtcagg
     2341 ttgatggcgg gcaggttggg gtcgttctgc ccgtcccaaa gccggggcgg aagttttcct
     2401 tcgggattgc tttgccggtt ggcaatgccc cacgcgaacg cggcttcgat tgcgtccgcc
     2461 gcgcccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcgcggct ttccatattg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttacgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattttc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgggaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagcccg aaaaagatgc cgatattggc ggcggcggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacatgcc ggtcagcaac
     3121 aattcgccta catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atgcgtccgt cagtaatgct ttcgtctccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatt ttcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgccgtta atgtggttct gacggtctgc aaattccttg gaatggttga tgcggtaatg
     3481 gataaaaccg ctcacgtcca acttgtcgca gctgctcaga ctatcggtat aaacaatgct
     3541 gtccggcatg attttctttt tgatgacagg gagtaacgtt tcagacttgg cattatccac
     3601 cacaacggta tagacccgtc cgttgcgttt cagaatgccg aa
//
LOCUS       DAXHKG010000161         3434 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.161, whole genome shotgun sequence.
ACCESSION   DAXHKG010000161 DAXHKG010000000
VERSION     DAXHKG010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.161"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..158)
                     /locus_tag="ACFMWP_001889"
     CDS             complement(<1..158)
                     /locus_tag="ACFMWP_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC5892433.1"
                     /translation="MSTFFQQTAQAMIAKHIDCFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRP"
     gene            complement(382..2610)
                     /locus_tag="ACFMWP_001890"
     CDS             complement(382..2610)
                     /locus_tag="ACFMWP_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0030256 - type I protein secretion system
                     complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HFC5892434.1"
                     /translation="MRSAVLFIYFFLLNIFLFQPAVIHIQSNYILFMSIVSAPLPALS
                     ALIILAHYHGIAANPADIQHEFCTSAQSDLNETQWLLAAKSLGLKAKVVRQPIKRLAM
                     ATLPALVWCDDGNHFILAKTDGEGEHAQFLIQDLVTNKSAVLSFAEFSNRYSGKLILV
                     ASRASVLGSLAKFDFTWFIPAVIKYRRLFFEVLVVSVVLQLFALITPLFFQVVMDKVL
                     VHRGFSTLDVVSVALLVVSLFEIVLGGLRTYLFAHTTSRIDVELGARLFRHLLSLPLS
                     YFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLAFSFIFLAVMWYYSSTLTWVVLA
                     SLPAYAFWSAFISPILRTRLNDKFARNADNQSFLVESITAVGTVKAMAVEPQMTQRWD
                     NQLAAYVASGFRVTKLAVVGQQGVQLIQKLVTVATLWIGARLVIEGKLTVGQLIAFNM
                     LSGQVAAPVIRLAQLWQDFQQVGISVARLGDILNAPTENASSHLALPDIRGEITFEHV
                     DFRYKADGRLILQDLNLRIRAGEVLGIVGRSGSGKSTLTKLVQRLYVPEQGRVLVDGN
                     DLALAAPAWLRRQVGVVLQENVLLNRSIRDNIALTDTGMPLERIIEAAKLAGAHEFIM
                     ELPEGYGTVVGEQGAGLSGGQRQRIAIARALITNPRILIFDEATSALDYESERAIMQN
                     MQAICANRTVLIIAHRLSTVKTAHRIIAMDKGRIVEAGTQQELLAKPNGYYRYLYDLQ
                     NG"
     gene            complement(3315..>3434)
                     /locus_tag="ACFMWP_001891"
     CDS             complement(3315..>3434)
                     /locus_tag="ACFMWP_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892435.1"
                     /translation="KYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI"
BASE COUNT          977 a          908 c          782 g          767 t
ORIGIN      
        1 ggacggccgc ggtggtctct gaggtaacgg gttctttgac ggttcaggta ttgttcgatc
       61 ggctgccaat caattacctg gtccaacttc aatagtggga agcagtcgat gtgcttggca
      121 atcatggctt gcgcggtttg ttgaaagaag gtgctcatgg aaaatcccct aaatgtcttg
      181 gtgggaattt aggggatttt ggggaatttt gcaaaggtct ctagatgagt gaaaaagaag
      241 tgcaggctgc ctaaaaagac agaaaaagtc tttccggcag cctgcacttt ggtttcattt
      301 cagtcagtaa acccagtaaa cgacggtctg aaaacgcaga acgttacgaa aaaagcagcc
      361 tacacgccca tcccccgcct tctacccgtt ctgtaaatca tacagatagc ggtaatatcc
      421 gttcggcttc gccagcaatt cctgctgtgt tcccgcttcc acaatcctgc ctttatccat
      481 ggcaatgatc cggtgtgccg ttttaacagt ggacagacgg tgggcgataa tcagcaccgt
      541 ccggttggcg caaatggcct gcatgttctg cataatcgct cgttcacttt cataatccag
      601 cgcgctggtg gcttcatcaa aaatcagaat gcgcggattg gtgattaacg cgcgggcaat
      661 cgcaatacgc tgccgctgtc cgcccgacaa gccggcccct tgttcgccca ccacggtgcc
      721 gtagccttcc ggcagctcca taataaactc gtgtgcgccc gccagtttgg ctgcttcgat
      781 aatgcgttcc agcggcatac ccgtatccgt cagcgcgata ttgtcgcgta tgctgcggtt
      841 gagcagcaca ttctcctgca agaccacgcc gacctgccgc cgcagccagg caggagcggc
      901 caaagccaaa tcgttgccgt ccaccaacac ccgtccctgc tccggtacat acagacgctg
      961 caccaatttg gtgagtgtgg atttgcccga ccccgaacgt cccacaatcc ccagcacttc
     1021 ccccgcccga atccgcaggt tcaaatcctg caaaatcagc ctgccgtccg ccttatagcg
     1081 gaaatcgaca tgttcgaacg taatctcccc ccggatatcg ggcaaagcca aatgcgaaga
     1141 cgcattctcg gtcggcgcat tcagaatatc ccccaaacgc gccaccgaaa tccccacctg
     1201 ctggaaatcc tgccacaact gcgccaaacg gataacaggc gccgccacct gtcccgagag
     1261 catattaaac gcaatcagct gccccaccgt cagcttgccc tcaattacca gccgtgcgcc
     1321 aatccacaac gtcgccaccg tcaccagctt ctgaatcagc tgcaccccct gctggccgac
     1381 caccgccaac ttcgttaccc gaaatcccga agccacataa gccgccaact gattgtccca
     1441 acgctgcgtc atctgcggct ccaccgccat cgcctttacc gtacccaccg cagtgatgct
     1501 ttctactaaa aacgactggt tgtctgcatt gcgcgcgaac ttatcgttca gacgcgtccg
     1561 cagtatcgga ctgataaatg ccgaccaaaa cgcataggca ggcaacgaag ccaataccac
     1621 ccaagtcaga gtggagctgt aataccacat caccgccaga aagataaacg aaaacgccaa
     1681 atccaacacc gaagtcagcg cctgaccggt caagaaattg cgaatctgct ccaattcccg
     1741 cacccgagcc accgtatcac ccactcgtct gtgctcgaaa taggataaag gcagggaaag
     1801 cagatgccgg aacaaacgcg cgcccaattc cacatcaata cgtgaagtcg tatgtgcaaa
     1861 cagatacgtc cgcaaaccgc ccaacacaat ctcaaacagc gacaccacca acaaagccac
     1921 cgacaccaca tccaaagtag agaatccccg atgtaccagc accttgtcca tcaccacttg
     1981 gaaaaacaga ggcgtaatca gcgcaaacag ctgcaacacc accgacacca ccaatacttc
     2041 aaaaaacaac cggcggtatt tgattaccgc cggaataaac caggtaaagt caaactttgc
     2101 caaactgccc aataccgaag cgcgggaagc aaccaatatc agtttgcccg aatatctgtt
     2161 agaaaattcg gcaaaagaca ataccgcaga cttattcgta accaaatcct gtatcaaaaa
     2221 ttgggcatgc tcaccctcac cgtctgtttt ggccaaaatg aaatggttgc cgtcatcaca
     2281 ccataccaat gcgggtaaag tcgccatagc caaacgttta ataggctggc ggactacctt
     2341 tgccttcaat cccaaagatt tggcggctaa cagccattgc gtttcattta aatcgctctg
     2401 tgcggaagta caaaattcat gctgtatatc ggcaggattg gcggcaatgc cgtggtaatg
     2461 ggcgaggatg atgagggcgg aaagggcggg gagcggtgcg gatacgatag acataaataa
     2521 aatatagtta gattggatgt ggataacggc tggctggaaa aggaatatat taagtagaaa
     2581 gaaatatata aataaaacag cagaacgcat tgtaaggata tatatgggaa ttgtaaagag
     2641 aaagtatgga aaagttctcg tttcaggaag gtaaaacggc ttaggaatcg agttagatga
     2701 ggatgcctcg cacctctcgt gcctcctgca taccgttaag gcacagggtt aaggtgcagg
     2761 ctgctccgaa ctctgttgcg gtcgggtaat gttatttttt gtgtttcagg cagcctgaaa
     2821 tatctgtata tttttgtttt aaatagattt taaagattga taactgttct tgacgatttt
     2881 tcaagaaagg agtaaatttc aagaaaggag taaagtgact tattatcaat gacaagcaac
     2941 gcgcgaagtg acaaggaaaa ctatctactt aaattctaag gaggcttcga atatcataaa
     3001 ccaatcagaa acatagagat aaaaattatg tacaaatata atcctcttat acaatttatt
     3061 gcacagttga ttatgtctta tggagcaagc gtagggtggg cacttgctgc cccacgcgtt
     3121 tcatatttca aggcagcctg aaaccgtgtg ggcataaatg cctaccctac atcccaaaaa
     3181 acaagcgcag cctgcgtgtg tagggtgcga actttcggca ggtagacacg cggttttata
     3241 gtttcaagct gagttgggat gcttaagata aagtacaaaa ccttaaaaaa taagggggct
     3301 gtactagatt agccctaaat tccacaccaa tcccgcaaaa tttttagctg tcgggacggt
     3361 gtgccgaagt taaaccgaaa tttgcattct ttcaagaaca gcgggaaaga tttacgatca
     3421 atttcgttgt attt
//
LOCUS       DAXHKG010000162         3433 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.162, whole genome shotgun sequence.
ACCESSION   DAXHKG010000162 DAXHKG010000000
VERSION     DAXHKG010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.162"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            43..711
                     /locus_tag="ACFMWP_001892"
     CDS             43..711
                     /locus_tag="ACFMWP_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HFC5892436.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPNNKCDSGKKGQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYST
                     NQDLTNTSKFVYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRGDRRTM
                     CQYK"
     gene            735..1349
                     /gene="pilV"
                     /locus_tag="ACFMWP_001893"
     CDS             735..1349
                     /gene="pilV"
                     /locus_tag="ACFMWP_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HFC5892437.1"
                     /translation="MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMERMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFQVDA
                     IKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCDASA
                     NGDTLIKVLWVNDSAGDSDITRTNLETNGDNIVYTYQARVGGRE"
     gene            1346..2284
                     /locus_tag="ACFMWP_001894"
     CDS             1346..2284
                     /locus_tag="ACFMWP_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HFC5892438.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLSAQQDLRNAATLIVRDARMAGGFGCFNMSEHPATDVVSDVAQKNRS
                     FSLKRNGIDKLIPIAESSNIGYPGFTQRLNALIFQYGIDDVNASADTTVVSSCSKIAK
                     LGKKISTLQEAKSALQITNDDKQNGNITRQRHVVNAYAVGRIAGEEGLFRFQLDDKGK
                     WGNPQLLAKKVRRMDVRYIYVSGCPEDDDAGKEETFKYTDKFDKSKNAVTPAGVEVLL
                     SSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2263..2862
                     /locus_tag="ACFMWP_001895"
     CDS             2263..2862
                     /locus_tag="ACFMWP_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HFC5892439.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISTNESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NTNNGNEEAFDNIVVQGKPIVEAVKRFCPANSTDLCIDKKGMEYKKGTRSVSKPPHYI
                     IEYLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2867..3340
                     /locus_tag="ACFMWP_001896"
     CDS             2867..3340
                     /locus_tag="ACFMWP_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HFC5892440.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAFSNRKK"
BASE COUNT          983 a          688 c          863 g          899 t
ORIGIN      
        1 aatttaatcc actatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacgccca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggctttcggc gacaaaaacg gcaataaggg atatgacaat
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa tgataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtcagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttattcta ccaatcagga tctcacgaat
      541 acttccaaat ttgtttactc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattgacag cagcggcagg
      661 gtcgaagttt gccctagggg tgatcggcgt actatgtgcc agtataaata acagtttcag
      721 ttttaaaaat gaatatgaag aataatgatt gcttccgcct gaaagattcc cagtccggta
      781 tggcgctgat agaagtcttg gttgctatgc tcgttctgac catcggtatt ttggcgttac
      841 tgtctgtgca gttgcggaca gtcgcttccg tcagggaggc ggagacacaa accatcgtca
      901 gccaaatcac gcaaaacctg atggaaagaa tgttgatgaa tccgaccatt gattcggaca
      961 gcaacaagaa aaactataat ctttacatgg gaaaccatca tacactatca gctgtggatg
     1021 gcgattttca ggttgatgcc ataaaaacta agacgcagtt ggcagaggca caattgaaga
     1081 gatttagtta tgagctgaaa aatgccttgc cggatgcggc agccatccat tacgccgtct
     1141 gcaaggattc gtcgggtgtt gcgccgacat tgtccgccgg cagtactttt tcttcaaatt
     1201 gcgatgctag tgcaaatggg gatactttga ttaaagtatt gtgggtaaat gattcggcag
     1261 gggattcgga tatcacccgt acgaatcttg agacgaacgg cgacaatatc gtatatacct
     1321 atcaggcaag ggtcggaggt cgggaatgag acgtaaaatg ctaaacgtac caaaaggcag
     1381 ttatgatggt atgaagggtt ttaccattat tgaatttttg gttgcgggca tgctcagtat
     1441 gattgtcctg atggcggtcg gatcgagtta ctttacatct cggaaattaa atgatgcggc
     1501 aaacgagcgt ctttccgcac aacaggattt gcggaatgcg gcaacattga ttgtccgcga
     1561 tgcaagaatg gcagggggct tcggttgttt caatatgtcc gagcatcctg caactgatgt
     1621 tgtttccgat gtggcgcaaa aaaaccgttc tttttcctta aaaaggaacg gtatagataa
     1681 acttattccc atagcggaat cttcaaatat cggatatccg ggttttaccc agcgccttaa
     1741 cgcattgatt ttccaatacg gaatcgatga tgttaatgca agcgccgata ctaccgtcgt
     1801 cagcagctgt tccaaaatag caaaactggg taagaaaata tctaccttgc aagaagcaaa
     1861 gagtgcatta cagattacta atgatgataa acaaaatgga aatatcaccc gtcaaaggca
     1921 tgtggtcaat gcctatgcgg tcggcaggat tgccggtgag gaaggtttgt tccgcttcca
     1981 attggatgat aagggcaagt ggggtaatcc tcagttgctc gcgaaaaagg ttagacgtat
     2041 ggatgtgcgg tatatctatg tttccggctg tcctgaagat gacgatgccg gcaaagagga
     2101 aacattcaaa tatacggata aattcgacaa atccaaaaat gctgttacgc ccgccggggt
     2161 ggaggtttta ttgagtagcg gtactgatac caagattgcc gcttcttcag acaatcatat
     2221 ttatgcttac cgtatcgatg cgacaatacg cgggggaaat gtatgcgcaa acagaacact
     2281 ttgacgggaa tcccgacttc tgacggacag agggggttcg cactgtttat cgtactgatg
     2341 gtgatgatcg tcgtggcatt tttggttgta actgccgcgc agtcttacaa taccgagcag
     2401 aggatcagta ccaacgaatc agacaggaaa ttggctttgt ctttggccga ggcggctttg
     2461 cgggaaggcg aacttcaggt tttggatttg gaatatgata cggacagtaa ggttacattt
     2521 agtgaaaact gtggaaaagg tctgtgtacc gcagtgaatg tgcggacaaa tacaaataat
     2581 ggtaatgaag aggcttttga caatatcgtg gtgcaaggca agcccatcgt tgaggcggtg
     2641 aagcgttttt gccctgcaaa ttctaccgac ctgtgcattg acaagaaagg gatggaatat
     2701 aagaaaggca cgagaagcgt cagcaaacca ccacactata ttatcgaata tttgggcgtg
     2761 aagaacggag aaaatgttta tcgggttact gccaaggctt ggggtaagaa tgccaatacc
     2821 gtggtcgtcc ttcaatctta tgtaagcaat aatgatgagt aataaaatgg aacaaaaagg
     2881 gtttacattg attgagatga tgatagtcgt cgcgatactc ggcatcatca gcgtcattgc
     2941 cataccttct tatcaaagtt atattgaaaa aggctatcag tcccagcttt atacggagat
     3001 ggtcggtatc aacaatattt ccaaacagtt tattttgaaa aatcccctgg acgataatca
     3061 gaccatcaag agcaaactgg aaatatttgt ctcaggctat aagatgaatc cgaaaattgc
     3121 cgaaaaatat aatgtttcgg tgcattttgt caataaggaa aaaccaaggg catacagctt
     3181 ggtcggcgtt ccaaagacgg ggacgggtta tactttgtcg gtatggatga acagcgtggg
     3241 cgacggatac aaatgccgtg atgccgcttc tgcccgagcc catttggaga ccttgtcctc
     3301 agatgtcggc tgtgaagcct tctctaatcg taaaaaatag ggctgttttg ccgatgccgt
     3361 ctgaagatta attttcagac ggcattttta tgggtatagt ggattaacaa aaatcaggac
     3421 aaggcgacga agc
//
LOCUS       DAXHKG010000163         3427 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.163, whole genome shotgun sequence.
ACCESSION   DAXHKG010000163 DAXHKG010000000
VERSION     DAXHKG010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.163"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            314..3079
                     /gene="tdfH"
                     /locus_tag="ACFMWP_001897"
     CDS             314..3079
                     /gene="tdfH"
                     /locus_tag="ACFMWP_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HFC5892441.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQQYFVQTGGLKFNSNSGKWER
                     DLQRQFWKTSYYKQYKDPQKLKKYIEDQDKDWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYSSEGEFKRAFGENSPTYKKHCNPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNFRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     MTMSYKF"
     gene            3122..3364
                     /locus_tag="ACFMWP_001898"
     CDS             3122..3364
                     /locus_tag="ACFMWP_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892442.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPQKRESRHSMLRQFIEND"
BASE COUNT          974 a          846 c          828 g          779 t
ORIGIN      
        1 gcctgcgcgg gaatgacggc tgcagatgcc cgacggtctt tatagcggat taataaaaat
       61 caggacaagg cggcgagcca cagacagtac aaacagtacg gaaccgattc acttggtgct
      121 tcagcacctt agagaatcgt tctctttgag ctaaagcgag acaacgctgt actggttttt
      181 gttaatccac tataaatatc caattgaaat cttcagacgg tatatcaaat ttacactttt
      241 ttaatgttta tgccgcctga aaaaaatgct agtatatttc ctaattgtct gactgtttat
      301 tgttgaggaa aatatgagat cttctttccg gttgaagccg atttgttttt accttatggg
      361 tgttatgcta tatcatcata gttatgccga agatgcaggg cgcgcgggca gcgaggcgca
      421 gatacaggtt ttggaagatg tgcacgtcaa ggcgaagcgc gtaccgaaag acaaaaaagt
      481 gtttaccgat gcgcgtgccg tatcgacccg tcaggatata ttcaaatcca gcgaaaacct
      541 cgacaacatc gtacgcagca tccccggtgc gtttacacag caagataaaa gctcgggcat
      601 tgtgtctttg aatattcgcg gcgacagcgg gttcgggcgg gtcaatacga tggtggacgg
      661 catcacgcag accttttatt cgacttctac cgatgcgggc agggcaggcg gttcatctca
      721 attcggtgca tctgtcgaca gcaattttat tgccggactg gatgtcgtca aaggcagctt
      781 cagcggctcg gcaggcatca acagccttgc cggttcggcg aatctgcgga ctttaggcgt
      841 ggatgacgtc gttcagggca ataataccta cggcctgctg ctaaaaggtc tgaccggcac
      901 caattcaacc aaaggtaatg cgatggcggc gataggtgcg cgcaaatggc tggaaagcgg
      961 agcatctgtc ggtgtgcttt acgggcacag caggcgcagc gtggcgcaaa attaccgcgt
     1021 gggcggcggc gggcagcaca tcggaaattt tggcgcggaa tatctggaac ggcgcaagca
     1081 gcaatatttt gtacaaacag gcgggttgaa attcaattcc aacagcggaa aatgggaacg
     1141 cgatttgcaa aggcaattct ggaaaaccag ttactataaa caatacaaag acccccagaa
     1201 actgaaaaaa tacatcgaag accaagataa agactggcgg gaaaacctgg cgccgcaata
     1261 cgacatcacc cccatcgatc cgtccagcct gaagcagcag tcggcaggca atctgtttaa
     1321 attggaatac gacggcgtat tcaataaata cacggcgcaa tttcgcgatt taaacaccaa
     1381 aatcggcagc cgcaaaatca tcaaccgcaa ttatcaattc aattacggtt tgtctttgaa
     1441 ctcgtatacc aacctcaatc tgaccgcagc ctacaattcg ggcaggcaga aatatccgaa
     1501 agggtcgaag tttacaggct gggggctttt aaaggatttt gaaacctaca acaacgcaaa
     1561 aatcctcgac ctcaacaaca ccgccacctt ccggctgccc cgcgaaaccg agttgcaaac
     1621 cactttgggc ttcaattatt tccacaacga atacggcaaa aaccgctttc ctgaagaatt
     1681 ggggctgttt ttcgacggtc ctgatcagga caacgggctt tattcctatt tggggcggtt
     1741 taagggcgat aaagggctgc tgccccaaaa atcaaccatt gtccaaccgg ccggcagcca
     1801 atatttcaac acgttctact tcgatgccgc gctcaaaaaa gacatttacc gcttaaacta
     1861 cagcaccaat accgtcggct accgtttcgg cggcgaatat acgggctatt acagctcgga
     1921 aggcgaattt aagcgggcat tcggagaaaa ctcgccgaca tacaagaaac attgcaaccc
     1981 gagctgcggg ctttatgaac ccgtattgaa aaaatacggc aaaaagcgcg ccaacaacca
     2041 ttcggtcagc attagtgcgg acttcggcga ttatttcatg ccgttcgcca gctattcgcg
     2101 cacacaccgt atgcccaaca tccaagaaat gtatttttcc caaatcggcg actccggcgt
     2161 tcacaccgcc ttaaaaccag agcgcgcaaa cacttggcaa tttggcttca atacctataa
     2221 aaaaggattg ttaaaacaag atgatacatt aggattaaaa ctggtcggct accgcagccg
     2281 catcgacaac tacatccaca acgtttacgg gaaatggtgg gatttgaacg gggatattcc
     2341 gagctgggtc agcagcaccg ggcttgccta caccatccaa catcgcaatt tcaaagacaa
     2401 agtgcacaaa cacggttttg agttggagct gaattacgat tatgggcgtt ttttcaccaa
     2461 cctttcttac gcctatcaaa aaagcacgca accgaccaac ttcagcgatg cgagcgaatc
     2521 gcccaacaat gcgtccaaag aagaccaact caaacaaggt tatgggttga gcagggtttc
     2581 cgccctgccg cgagattacg gacgtttgga agtcggtacg cgctggttgg gcaacaaact
     2641 gactttgggc ggcgcgatgc gctatttcgg caagagcatc cgcgcgacgg ctgaagaacg
     2701 ctatatcgac ggcaccaacg ggggaaatac cagcaatttc cggcaactgg gcaagcgttc
     2761 catcaaacaa accgaaactc ttgcccgcca gcctttgatt tttgattttt acgccgctta
     2821 cgagccgaag aaaaacctta ttttccgcgc cgaagtcaaa aatctgttcg acaggcgtta
     2881 tatcgatccg ctcgatgcgg gcaatgatgc ggcaacgcag cgttattaca gctcgttcga
     2941 cccgaaagac aaggacgaag acgtaacgtg taatgctgat ggcttgtgca acggcaaata
     3001 cggcggcaca agcaaaagcg tattgaccaa ttttgcacgc ggacgcacct ttttgatgac
     3061 gatgagctac aagttttaaa ggcagcccgc gttttgtgga aaaccgcaaa aaaaagccaa
     3121 aatgccgtct gaaagccctt cagacggcat ttgtttcccc aaacgcatca tcctgccgca
     3181 agcctatgcc aatccgtttt atcgcatcgg caactcaaag aaaaatccat ttcattccca
     3241 cgcagggaag ccggtttttg atttcggtta tttttggttg tttcgggtaa tttatgagtc
     3301 gtcattcccg caaaagcggg aatctagaca ttcaatgcta aggcaattta tcgaaaatga
     3361 ctgaaactca aaaaactgga ttcccacttt cgtgggaatg acgcggtgca ggtttccgta
     3421 tggatgg
//
LOCUS       DAXHKG010000164         3385 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.164, whole genome shotgun sequence.
ACCESSION   DAXHKG010000164 DAXHKG010000000
VERSION     DAXHKG010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3385
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.164"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            1..112
                     /locus_tag="ACFMWP_001899"
                     /pseudo
     CDS             1..112
                     /locus_tag="ACFMWP_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(196..366)
                     /locus_tag="ACFMWP_001900"
     CDS             complement(196..366)
                     /locus_tag="ACFMWP_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892443.1"
                     /translation="MLLYRLLGGAEIECGRCPVPPMTDWQHFLPAMGTVSAWVAVIWA
                     YLIIESEKNGRY"
     gene            523..2673
                     /gene="dinG"
                     /locus_tag="ACFMWP_001901"
     CDS             523..2673
                     /gene="dinG"
                     /locus_tag="ACFMWP_001901"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HFC5892444.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQNNAQQNLLGFEAPEVLWD
                     SKPKPEELKLLHDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAVAVRSLLKHVIGLNDALS
                     AARREKEQDGALLDRLTGDFGIFIARIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAIIEWLPKLISPGEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRVKTQRYGQQLLAGLPPFKRIG"
     gene            2709..3323
                     /locus_tag="ACFMWP_001902"
     CDS             2709..3323
                     /locus_tag="ACFMWP_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HFC5892445.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGAPVAGAASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT          849 a         1109 c          829 g          598 t
ORIGIN      
        1 cccgctattg aagttggatc aagtgattga ttggcagccg atcgaacaat acctgaatcg
       61 tcaaaaaacc cgttaccttc gagaccaccg cggccgtccc gcacatcctg tcgccggtat
      121 tccctaagcg gtacggcaac ctaaaacaaa tgccgtctga acttccgttt cagacggcat
      181 ttttatacgg actactcaat atcttccgtt tttttcactt tcaataatca gatatgccca
      241 aatcaccgcc acccaagccg acaccgttcc catcgccggc aaaaaatgct gccaatccgt
      301 catcggcggc acagggcaac ggccgcattc gatttccgcg ccgcccaaca accggtacag
      361 caacatatcc gcaatccaaa gcaacaacgg gtatttcaaa cgctgcaacc aaaaaaccaa
      421 ccacgtccgc acgattcacc tcacccccca ttccgacaac gatattgtac cgcttccgtg
      481 caatgttaaa ataagcccac ttctaccgcc gtacaaaacg ccatgctcac cgatttagaa
      541 aaaaacgcca tccgcgacca ttaccaaaac atcggcaaaa acctgcccgg tttccgtccg
      601 cgcgcttcgc agcgggaaat gattgcggcg gttgccaacg ctttttcgcg gacgttggcg
      661 cgcgaagaag gcggcgagcc gcccaagcgc gagggcgaga gcatcgccgt aatcgaaggg
      721 ccgaccggcg tgggcaaatc gcttgcctac ctgctggcgg gcggcatcat ggcgcagacg
      781 cgcggcaagc ggctgattgt gagcagcgca acggttgcct tacaggagca gttggttgac
      841 cgcgacctgc cgtttctggt cgaaaaaagc ggtttggaac tgaccttcgc gcttgccaaa
      901 gggcgcggcc gctatctctg cccttacaaa ctctaccaac tgacgcaaaa caacgcccag
      961 caaaacctgc ttggttttga agcaccggaa gtattgtggg acagcaaacc caagcccgaa
     1021 gaattgaagc tgctgcacga cattgccgac gaattttccg cccgacggtt caacggcgac
     1081 cgcgacactt ggccggaaaa aatcgatgac gcgatttggc tcaaagttac caacgaccgc
     1141 cacggctgcc tgaaaaccgc ctgtcccaac cgtccggaat gtccgtttta cctggcacgc
     1201 gatgtcttgg aaaccgtcga tgtcgtcgtt gccaaccacg accttctgct tgccgacatc
     1261 agtatgggcg gcggcgtgat tctgcccgcg cccgaaaaca gtttctattg catagacgaa
     1321 gcgcaccacc tgcccaaaaa agccctcagc cgttttgccg ccgaacattc gtggaatatt
     1381 gccgtttgga cgctggaaaa actgccgcag ctgaccggca agattgccgc gcttaccgat
     1441 aaagccgaac ttgccaacct tgccgatgaa gccgccgcat ccttgctcga cagcctgcac
     1501 gaatggcagt tccatttggc ggaagagccg tctttgagct tggggccgtc tgaaaacgac
     1561 aggcgaacca acagcgaacc gacttggctg tgggaagacg gcaaaatccc cgaaggcctc
     1621 gaaaccaccg tttccaacac cgccgttgct gtgcgcagcc tgctcaaaca cgttatcggg
     1681 ctgaacgatg cgctttctgc cgcacgccgc gaaaaagaac aggacggcgc gctcctcgac
     1741 cgcctgaccg gcgatttcgg catcttcatc gcccgtatcg aacaaatcag cgcggtttgg
     1801 gatttgctct ccaccgtccc cctcgaaggc gaagagccgc tggcaaaatg gataacccgc
     1861 cgcgccgacg acaaaaacga ctacattttc aacgccagcc ccatcagcag cgcgtcccac
     1921 ctcgccaaca gcctgtggcg gcgcgcggca ggcgcggtat tgacctccgc caccctgcaa
     1981 tccttgggca actttaacct gatgctgcgc caaaccgggc tgcaatggct gcccgagacc
     2041 accaccctcg ccctcaaaag cccctttgac tttgaaaaac agggcgaact ctacatcccc
     2101 cccatatacg ccagccccaa agaccccgaa gcccacaccg ccgccatcat cgagtggctg
     2161 cccaagctca tttcgcccgg cgaagccatc ggcacgctcg tcttgttttc ctcgcgcaaa
     2221 caaatgcagg atgtcgccct gcgcctgccc ggagactacc tgccgctctt gctcgtacaa
     2281 ggcgaattac ccaaagccgt tctcctgcaa aaacaccacc gggccataga agaaggcaaa
     2341 gccagcatca tcttcggact cgacagcttt gccgaaggac tcgacctgcc cggcaccgcc
     2401 tgcgtgcaag tcatcatcgc caaacttccc ttcgccatgc ccgacaaccc catcgaaaaa
     2461 acccaaaacc gctggataga acagcgcggc ggcaaccctt tcatcgaaat caccgtcccc
     2521 gaagccggca tcaaactcat ccaggccgtc ggccgcctca tccgcaccga acaagactac
     2581 ggccgcgtaa ccatcctcga caaccgcgtc aaaacacagc ggtacggcca acaattatta
     2641 gccggcctgc caccgtttaa aaggataggg taaacctacc gccctgcccg caacagaaag
     2701 gaaaaatcat gaacttcacc cgactgctca accaagtctt aagcacggtt caaaaaaaag
     2761 gcaacacctt ctccgacagc ccgctcaatt cattcggcgg aggcgcgccg gttgccggtg
     2821 ccgcgtccat gctgctgaac ggtaaaaacc gcaaaaccat taccaaaatc ggttcgaccg
     2881 ccgctttggg ctacctcgcc taccggggct atcagatgtg gcagcaaaac aaagggcggg
     2941 caaccgtaac acaaagcgat ttccaacctg ccggagaaac tgaagaaaca tacagccgca
     3001 ccgtattgcg caccatgata gccgccgccg cttcagacgg catgatagac gaagccgaac
     3061 gccggactat cgaacaggaa agcggcacag accccgaaac tgccgcatgg ctcgccgccg
     3121 aataccgcct gcccgcaagc atcggggaca tcgccaccgc cgtcggcaac gatgaggcgt
     3181 tggcggcgga ggcctatctg gcggcaaggt tggtctgtgc cgatttgtcg cggaaagaaa
     3241 ccgtcttcct cgcccgcctg tcgcaggctt tgaaactgga tgacaatctg gtggagagtt
     3301 tggaaaggca attggggttt tgatgacaca gccagggagg gaaaatcatc aaaaaacggt
     3361 tattccgacc ccggcctcaa aacgg
//
LOCUS       DAXHKG010000165         3355 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.165, whole genome shotgun sequence.
ACCESSION   DAXHKG010000165 DAXHKG010000000
VERSION     DAXHKG010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3355
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.165"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            187..1062
                     /gene="dapA"
                     /locus_tag="ACFMWP_001903"
     CDS             187..1062
                     /gene="dapA"
                     /locus_tag="ACFMWP_001903"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HFC5892446.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADFTLS
                     VVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARKLNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            1071..2267
                     /gene="bamC"
                     /locus_tag="ACFMWP_001904"
     CDS             1071..2267
                     /gene="bamC"
                     /locus_tag="ACFMWP_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HFC5892447.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTLIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGSLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2324..3256)
                     /gene="pip"
                     /locus_tag="ACFMWP_001905"
     CDS             complement(2324..3256)
                     /gene="pip"
                     /locus_tag="ACFMWP_001905"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HFC5892448.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIQHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLADALVQAVEDIFPRLL"
BASE COUNT          881 a         1123 c          744 g          607 t
ORIGIN      
        1 ccgacggcac cggcataaac cggcgaatat aataaaatga tttcaaacag gaaaaatcaa
       61 tttccaccat acctttcggc gcaaacgccc cacatctgca acccgccgga tttcacacct
      121 gcggtaaagt aggctacaat cagaagcatt accgccccct acaccacaac tgataaaagg
      181 ttctgtatgt tacaaggtag cctggttgcc ctgattaccc cgatgaatca agacggcagc
      241 atccattacg aacaactccg cgatttgatc gactggcaca ttgaaaacgg cacggacggc
      301 atcgttgccg tcggcacgac aggcgaatcc gccaccctct ccgtcgaaga acacaccgcc
      361 gtcatcgaag ccgtcgtcaa acacgttgcc aaacgcgtcc ccgtcatcgc cggcacaggg
      421 gcaaacaaca ccgtcgaagc catcgccctt tcccaagccg ccgaaaaagc cggtgcagac
      481 ttcactctct ccgtcgtccc ctattacaac aagccctccc aagaaggcat ttaccaacat
      541 ttcaaaacca tcgccgaagc cacttcgatt ccgatgatta tctacaacgt gcccggccgt
      601 accgtcgtca gcatgactaa cgacactatc ctgcgccttg ccgaaatccc caacatcgtc
      661 ggcgtgaaag aagccagcgg caacatcggc agcaacatcg aactcatcaa ccgcgcgccc
      721 gaaggcttcg tcgtcctttc cggcgacgac cataccgccc tgccgttcat gctgtgcggc
      781 ggacacggcg tgattaccgt agccgccaac gccgcaccca agctctttgc cgatatgtgc
      841 cgcgccgcgc tgcaaggcga cattgccctc gcacgcaagc tcaatgaccg gctgattccg
      901 atttacgaca ccatgttctg cgaacccagc cccgccgcac cgaaatgggc ggtatccgcc
      961 ctgggcagat gcgaaccgca cgtccgcctg ccgctcgttc cgctgacgga aggcggacag
     1021 gcaaaagtcc gcgccgccct gaaagcctca ggacaactct aaatataact atgccgtctg
     1081 aaccgttcgg acggcataac gcaacaaaca ctttaatatc catcacacag gatgacacga
     1141 tgacccttat caaacccgtc attgccgcgc tcgcactcat cgggcttgcc gcctgctccg
     1201 gcagcaaaac cgaacagccc aagctcgact accaaagccg gtcgcaccgc ctgatcaaac
     1261 ttgaagtccc acccgatttg aacaaccccg accaaggcag cctctaccgc ctgcctgccg
     1321 gttcgggagc cgtccgcgcc agcgatttgg aaaaacgccg cacacccgcc gtccaacagc
     1381 ctgccgatgc cgaagtattg aaaagcgtca aaggtgtccg cctcgagcgc gacggcagcc
     1441 aacgttggct tgtcgttgac ggcaaatccc ctgccgaaat ctggccgctt ctgaaagcct
     1501 tttggcagga aaacggcttc gacatcaaat ccgaagaacc cgccatcgga caaatggaaa
     1561 ccgagtgggc ggaaaaccgt gccaaaatcc cccaagacag cttgcgccgc ctattcgaca
     1621 cagtcggttt gggcggcatc tactccaccg gcgagcgcga caaattcatc gtccgtatcg
     1681 aacagggcaa aaacggcgtt tccgacatct tcttcgccca caaagccatg aaagaagtgt
     1741 acggcggcaa agacaaagac acgaccgtat ggcagccctc cccgtccgat cccaacctcg
     1801 aagccgcttt cctgacgcgc tttatgcaat atttgggcgt tgacggacag caggcggaaa
     1861 acgcatcggc aaaaaacccg accctgcccg ccgccaacga aatggcgcgt atcgaaggca
     1921 aaagcctgat tgtctttggc gactacggca gaaactggcg gcgcaccgcg ctcgccctcg
     1981 accgcatcgg gctgaccgtc gtcggtcaaa acaccgaacg ccacgctttc ctggttcaaa
     2041 aagccccgaa cgaaagcaat gcagttaccg aacaaaaacc cggcctgttc aaacgcctgc
     2101 tgggcaaagg caaagcggag aaacctgccg aacagccgga actgattgtc tatgccgagc
     2161 ctgtcgccaa cggctcgcgc atcgtcctgc tcaacaaaga cggcagcgca tatgccggca
     2221 aagacgcatc cgcattattg ggcaaactcc attccgaact gcgttaaacc attcaaaaca
     2281 aaagcagctt ccaaacagaa gctgcttttt tatgcggaac tttttacaac aaccgaggaa
     2341 aaatatcctc aaccgcctga accaacgcat ccgccaaagg cggatcgaac gcacgatgcc
     2401 ctgcctgaac caccctcaat tccgcttccg gaaaggcttt cgacagcgcc cacgcactct
     2461 gcatcggcgt acacaaatca taccgcccct gcacgataat ggtcgggata tgctgtattt
     2521 tgccgatatt gttcaaaatc gccctatcgc cctgcaacca gccgccgttg acaaaataat
     2581 ggttttccaa acgcgcgatt gccagcgagg cataagcatc ttcatccact tcctccggct
     2641 cgaaacggat cagatagctt tcccaatccg cccaagcctt tgcggcagac aggcacactt
     2701 cttcatcttg atgaaacagc aacccgtgat acgcctcaat cagccggttc cgccgatttt
     2761 cagcaatcgg cgcgacaaat ttttgccatt gttccggata aatccggctc acaccgcccg
     2821 cctcgttcag ccacgccgtt tcagacggcc tgcacaaaaa tatcccgcgc aacaccaatc
     2881 cctttacccg ttccggatgg gtttgggcat aagccagcga caaagtactg ccccacgaac
     2941 cgccgaacac cagccatttc ccgataccca gcatttcacg gactttttca atatccgcca
     3001 ccaaatccca agtcgtattg tcttccgcac aagcatacgg gcgcgaacgt ccgcaaccgc
     3061 gctggtcaat aatgacgatg cggaacacat cgggattgaa aaaaccccga cattcaggcg
     3121 aagcccccgc ccccggtccg ccgtgtaaaa aaatgaccgg cacaccgtcg ggattgcccg
     3181 actcttccca ataaatttga tgaatttcag acacctgcaa gtatccgcta tgaaaaggct
     3241 gttttatctc atacatcatc ttctcccata ttgcctctga caatccgaac attcccacac
     3301 gcaacatcac gcacgaaaca caagccgccc cgaaaggcaa attccgaaaa atcgc
//
LOCUS       DAXHKG010000166         3344 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.166, whole genome shotgun sequence.
ACCESSION   DAXHKG010000166 DAXHKG010000000
VERSION     DAXHKG010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3344
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.166"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            60..689
                     /locus_tag="ACFMWP_001906"
     CDS             60..689
                     /locus_tag="ACFMWP_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HFC5892449.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPYE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALGLSPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            864..3242
                     /gene="hmbR"
                     /locus_tag="ACFMWP_001907"
     CDS             864..3242
                     /gene="hmbR"
                     /locus_tag="ACFMWP_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
                     /protein_id="HFC5892450.1"
                     /translation="MKPLQMLPIAALVGSIFGNPVFAADEAATETTPVKAEVKAVRVK
                     GQRNAPAAVERVNLNRIKQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAVRGVEGNRVG
                     VSIDGVNLPDSEENSLYARYGNFNSSRLSIDPELVRNIDIVKGADSFNTGSGALGGGV
                     NYQTLQGRDLLLPERQFGVMMKNGYSTRNREWTNTLGFGVSNDRVDAALLYSQRRGHE
                     TESAGKRGYPVEGAGSGANIRGSARGIPDPSQHKYHSFLGKIAYQINDNHRIGASLNG
                     QQGHNYTVEESYNLLASYWREADDVNRRRNTNLFYEWTPESDRLSMVKADVDYQKTKV
                     SAVNYKGSFPIEDSSTLTRNYNQKDLDEIYNRSMDTRFKRITLRLDSHPLQLGGGRHR
                     LSFKTFASRRDFENLNRDDYYFSGRVVRTTSSIQHPVKTTNYGFSLSDQIQWNDVFSS
                     RAGIRYDHTKMTPQELNAECHACDKTPPAANTYKGWSGFVGLAAQLNQAWRVGYDITS
                     GYRVPNASEVYFTYNHGSGNWLPNPNLKAERSTTHTLSLQGRSEKGTLDANLYQSNYR
                     NFLSEEQKLTTSGDVSCTQMNYYYGMCSNPYSEKLEWQMQNIDKARIRGIELTGRLNV
                     DKVASFVPEGWKLFGSLGYAKSKLSGDNSLLSTQPLKVIAGIDYESPSEKWGVFSRLT
                     YLGAKKVKDAQYTVYENKGWGTPLQKKVKDYPWLNKSAYVFDMYGFYKPVKNLTLRAG
                     VYNVFNRKYTTWDSLRGLYSYSTTNSVDRDGKGLDRYRAPSRNYAVSLEWKF"
BASE COUNT          898 a          876 c          829 g          741 t
ORIGIN      
        1 gggcaagtgc ggattttgcc cgccccgcat ccttatccct taccgacaaa ggaaaactta
       61 tgagtgaaac cgaaaatcaa gccctgacgt ttgccaaacg tctgaaggcg gataccacgg
      121 cggttcacga cagcgtggat aacctcgtta tgtctgtcca accgtttgtc agcaaagaaa
      181 actacatcaa atttttgaaa ctccaatccg ttttccacaa ggccgtcgac cacatctata
      241 aagatgccga attaaacaaa gccattcccg agctggaata catggcgcga tacgatgccg
      301 taacgcaaga cttgaaagat ttgggcgaag agccttacaa attcgacaaa gaattgccat
      361 acgaaactgg caacaaagca atcggctggc tttattgcgc cgaaggatcc aatttgggcg
      421 cggcgttttt gttcaaacac gcccaaaaac tcgattacaa cggcgaacac ggcgcgcgcc
      481 acctcgctcc gcatcccgac gggcgcggca aacactggcg cgccttcgtc gagcatctga
      541 acgcattggg cttaagcccc gaagccgaag ccgaagccat ccaaggcgcg cgcgaagcct
      601 ttgcattcta caaagtcgtg ttgcgcgaaa ccttcggctt ggcagccgat gccgaagccc
      661 ccgaaggtat gatgccgcac aggcactaaa aaataatcga accaaataaa caaggtctcg
      721 gcatagctgt ttgcagggac ctttaattac acggcgcggc tttgtttaca tggattactg
      781 tcttattaaa tattaatgat tatcataaaa tctattattc gctaaccgat ggatgaacaa
      841 tccatacatc ttgagttgat aatatgaaac cattacaaat gctccctatc gccgcgctgg
      901 tcggcagtat tttcggcaat ccggtctttg cggcagatga agctgcaact gaaaccacac
      961 ccgttaaggc agaggtaaaa gcagtgcgcg ttaaaggcca gcgcaatgcg cctgcggctg
     1021 tggaacgcgt caaccttaac cgtatcaaac aagaaatgat acgcgacaac aaagacttgg
     1081 tgcgctattc caccgatgtc ggcttgagcg acagcggccg ccatcaaaaa ggctttgctg
     1141 ttcgcggcgt ggaaggcaac cgtgtcggcg tgagcataga cggcgtaaac ctgcctgatt
     1201 ccgaagaaaa ctcgctgtac gcccgttatg gcaacttcaa cagctcgcgt ctgtctatcg
     1261 accccgaact cgtgcgcaac atcgacatcg taaaaggggc ggactctttc aataccggca
     1321 gcggcgcctt gggcggcggt gtgaattacc aaaccctgca aggacgtgac ttactgttgc
     1381 ctgaacggca gttcggcgtg atgatgaaaa acggttacag cacgcgtaac cgtgaatgga
     1441 caaataccct cggtttcggc gtgagcaacg accgcgtgga tgccgctttg ctgtattcgc
     1501 aacggcgcgg ccatgaaact gaaagcgcag gcaagcgtgg ttatccggta gagggtgctg
     1561 gtagcggagc gaatatccgt ggttctgcgc gcggtattcc tgatccgtcc caacacaaat
     1621 accacagctt cttgggtaag attgcttatc aaatcaacga caaccaccgc atcggcgcat
     1681 cgctcaacgg tcagcagggg cataattaca cggttgaaga gtcttacaac ctgcttgctt
     1741 cttattggcg tgaagctgac gatgtcaaca gacggcgtaa caccaacctc ttttacgaat
     1801 ggacgccgga atccgaccgg ttgtctatgg taaaagcgga tgtcgattat caaaaaacca
     1861 aagtatctgc ggtcaactac aaaggttcgt tcccgataga ggattcttcc accttgacac
     1921 gtaactacaa tcaaaaggac ttggatgaaa tctacaaccg cagtatggat acccgcttca
     1981 aacgcattac cctgcgtttg gacagccatc cgttgcaact cggggggggg cgacaccgcc
     2041 tgtcgtttaa aactttcgcc agccgccgtg attttgaaaa cctaaaccgc gacgattatt
     2101 acttcagcgg ccgtgttgtt cgaaccacca gcagtatcca gcatccggtg aaaaccacca
     2161 actacggttt ctcactgtct gaccaaattc aatggaacga cgtgttcagt agccgcgcag
     2221 gtatccgtta cgatcatacc aaaatgacgc ctcaggaatt gaatgccgag tgtcatgctt
     2281 gtgacaaaac accgcctgca gccaacactt ataaaggctg gagcggtttt gtcggcttgg
     2341 cggcgcaact gaatcaggct tggcgtgtcg gttacgacat tacttccggc taccgtgtcc
     2401 ccaatgcgtc cgaagtgtat ttcacttaca accacggttc gggtaattgg ctgcccaatc
     2461 ccaacctgaa agccgagcgc agcaccaccc acaccctctc tctgcaaggc cgcagcgaaa
     2521 aaggtacttt ggatgccaac ctgtatcaaa gcaattaccg caatttcctg tctgaagagc
     2581 agaagctgac caccagcggc gatgtcagct gtactcagat gaattactac tacggtatgt
     2641 gtagcaatcc ttattccgaa aaactggaat ggcagatgca aaatatcgac aaggccagaa
     2701 tccgcggtat cgagctgacg ggccgtctga atgtggacaa agtagcgtct tttgttcctg
     2761 agggctggaa actgttcggc tcgctgggtt atgcgaaaag caaactgtcg ggcgacaaca
     2821 gcctgctgtc cacccagccg ttgaaagtga ttgccggtat cgactatgaa agtccgagcg
     2881 aaaaatgggg cgtgttctcc cgcctgacct atctgggcgc gaaaaaggtc aaagacgcgc
     2941 aatacaccgt ttatgaaaac aagggctggg gtacgccttt gcagaaaaag gtaaaagatt
     3001 acccgtggct gaacaagtcg gcttatgtgt tcgatatgta cggcttctac aaaccggtga
     3061 aaaacctgac tttgcgtgca ggcgtatata atgtgttcaa ccgcaaatac accacttggg
     3121 attccctgcg cggcctgtat agctacagca ccaccaactc ggtcgaccgc gatggcaaag
     3181 gcttagaccg ctaccgcgcc ccaagccgta attacgccgt atcgctggaa tggaagtttt
     3241 aatctggtat tattgaatta atcgccttgt tgaaaattaa agccgtccga attgtgttca
     3301 agaactcatt cggacggttt tttaccgtaa atctgtgtga tggg
//
LOCUS       DAXHKG010000167         3327 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.167, whole genome shotgun sequence.
ACCESSION   DAXHKG010000167 DAXHKG010000000
VERSION     DAXHKG010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.167"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            25..1194
                     /locus_tag="ACFMWP_001908"
     CDS             25..1194
                     /locus_tag="ACFMWP_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HFC5892451.1"
                     /translation="MNKKRVLLIASYDSFLNTGYAVAKEINYSTIDIYIHQTKKNILS
                     ESQLSLNGLSLKEINFFHIDDYFDKLMYQNYDIVILSLGNGLLTRFFRNSSKLNLTLP
                     IVITLFPGVIFGDSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPIL
                     RKKHHCSDGNKVYFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDIT
                     VHEDKYSYAELAKNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGV
                     ISDLGVDKKYANTHFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLL
                     EVTSTQPPSFDNYFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1242..2105
                     /gene="galU"
                     /locus_tag="ACFMWP_001909"
     CDS             1242..2105
                     /gene="galU"
                     /locus_tag="ACFMWP_001909"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFC5892452.1"
                     /translation="MQKIRKAVFPVAGMGARFLPATKASAKEMLPIVDKPLIQYAAEE
                     AVAAGCTELIFITGRNKRNIEDHFDKAYELETELEMREKHKLLGYVQKILPDHVSCIF
                     IRQAEALGLGHAVLCARPAVGNEPFAVILADDLIDAPQGALKQMVDIYNQSGNSILGV
                     ETVDPSQTGSYGIVEVEQLKSYQRVTNIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGGEIQLTDGIARLLDHEFVLAHAFEGKRYDCGSKLGYLEATVAYGLKHPELK
                     DDFKELLKQFV"
     gene            2188..3204
                     /gene="galE"
                     /locus_tag="ACFMWP_001910"
     CDS             2188..3204
                     /gene="galE"
                     /locus_tag="ACFMWP_001910"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HFC5892453.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVF
                     GDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAF
                     EAASGLTIPYEVKPRRAGDLACFYADPAYTKTQTGWETKRDLAQMMEDSWRWVSNNPN
                     GYDD"
BASE COUNT          992 a          621 c          708 g         1006 t
ORIGIN      
        1 ttaatatcta atatttaaaa tacaatgaat aaaaaacgag tcctattaat tgctagttat
       61 gattcttttt tgaatactgg atatgctgtt gcaaaagaaa ttaactattc aacaatcgat
      121 atttatatcc accaaacaaa aaaaaatatt ctttcggaat cacaattaag tttaaatggg
      181 ctttctttaa aagaaatcaa tttttttcat attgatgatt atttcgacaa attaatgtac
      241 cagaattatg atattgttat tctatcatta ggtaatggtt tactgacgcg tttttttcgg
      301 aatagtagca aacttaattt aacattacct atagtaatta ctctatttcc aggggtaatt
      361 tttggtgatt cagaaagtat tataactagg ttaggtgcta atattttatt gttcaataat
      421 tattatgatt accaaatagg caataagttc aaagaacgtt acaacttatc gtgtacaaat
      481 attttatatg gttatcctat cctacgaaaa aaacaccatt gctctgatgg caataaagtt
      541 tatttcattg atcaagtaaa aattccagat ggaaaaaaag aaagattatt aattctaaaa
      601 aaattaatag cactggctaa tcgctatcca cataaagatt tagtactatt attacgtgtc
      661 catcaaaatg atatcacagt acatgaagat aaatactctt atgctgaatt agcaaaaaat
      721 atgaaattgc ctgataattt taaaatagag agaaaacgga cacaagatgc cttacaagaa
      781 atgggatatt gtttatcatt ctcttcaaca atgttatttg aagctgaaag ctgcggaatt
      841 cctattggtg tcattagtga tttaggggtt gacaagaaat atgccaatac acatttcaaa
      901 gatagtggtg ttttggttaa tttagatacg gtagacttgg actctccaaa taccattaat
      961 ccaacttggg ctgaactata tactaatcca gatagcctct cttcaaaaga gtttaaccaa
     1021 ttattagagg ttacttctac tcaaccacct agttttgata attattttat tgcagttaat
     1081 gacgttcagc ctgtatctat ggttctgtta cgtaaattta aaaagcttat atatcatcct
     1141 aagcaattct ttgttgattc aaaactatat aaattaatta aatttactaa ataattttta
     1201 ctatgggttg ccttatttat ttcaaaggag tgacataaaa aatgcaaaaa attcgtaaag
     1261 ctgtattccc tgtagctggc atgggagccc gattcttacc tgccacgaaa gccagcgcta
     1321 aagaaatgct gccaatcgtg gacaaaccgt taattcaata tgctgcggaa gaagccgttg
     1381 ccgcgggttg tactgaattg atttttatca ccggccgtaa taagcgtaat attgaagacc
     1441 acttcgataa agcctatgag ttggaaactg aactggaaat gcgtgaaaag cataaattgc
     1501 ttggctatgt gcaaaaaatt ctgcctgatc atgtcagctg tattttcatt cgtcaggcag
     1561 aagctttggg cttgggtcat gcggtattat gcgcccgtcc tgctgtcggt aatgagcctt
     1621 ttgccgtgat tttggccgat gacttgattg atgcaccaca aggcgcactc aagcagatgg
     1681 tagatattta caatcaaagc ggcaacagca ttttaggggt agaaacagtc gatccttcgc
     1741 aaaccggttc atacggcatt gtcgaagtgg aacagctgaa aagctatcag cgtgtaacca
     1801 atattgtgga aaaaccaaag cctgaagatg cgccgtcaaa tttagcggta gtcggccgtt
     1861 atattttgac accgcgtatt tttgatttgc tgactaatct acctcgtggt gcaggtggtg
     1921 aaatccagct aactgatggt attgcccgcc tacttgacca tgaatttgtc ttggcgcatg
     1981 cgtttgaagg taagcgttat gattgtggca gtaagttggg ctatctggaa gccacggtag
     2041 cttatggctt gaagcatccc gaattaaaag atgatttcaa agaattattg aagcaatttg
     2101 tataatttta aggccgtctg aaaaagaaaa ggcatcatgt tttttacact ttcaggcggc
     2161 cttttaaaca taaagaagga aaacgtgatg aacattctcg ttaccggcgg caccggtttt
     2221 atcggctcgc acaccgttgt ttctttgctg aaaagcggtc atcaagtcgt gattttggat
     2281 aacctatgca attccagcat caatatcctg ccacgcttga aaacgattac cggccaagag
     2341 attccgtttt atcaaggcga tatccgcgat cgtgagattt tgcgccgtat ttttgcggaa
     2401 aaccgcattg attcggtgat tcattttgcc ggcttgaaag cggtgggtga aagtgtggcc
     2461 gagccgataa aatattatga taataatgtt tccggcagct tggtgttggc ggaagaaatg
     2521 gcgcgtgcgg gcgtgtttag cattgtgttc agttcttcgg cgacggttta tggcgatccg
     2581 ggcaaagtgc cttataccga ggatatgcca ccgggcgaca ccaccagccc ttacggcgca
     2641 tcgaaatcga tggttgagcg cattctcact gacattcaaa aagccgatcc gcgctggagc
     2701 atgattttgt tgcgttattt caatccgatt ggcgcgcatg aaagcggttt gattggcgag
     2761 cagccaaacg gtatcccaaa taatttgttg ccttatatct gccaagtggc ggcaggcaaa
     2821 ctgccgcaat tagcggtatt cggtgatgac taccctaccc ctgatggcac gggtatgcgc
     2881 gactatattc atgtgatgga tttggcagaa ggccatgtcg cggctatgca ggcgaaaagc
     2941 aatgtagcag gcacgcattt gttgaactta ggttccggcc gcgcttcttc ggtgttggaa
     3001 atcatccgcg catttgaagc agcttcgggt ttgacgattc cgtatgaagt caaaccgcgc
     3061 cgtgccggtg atttggcgtg cttctatgcc gaccctgcct acaccaaaac gcagaccggt
     3121 tgggaaacca agcgtgattt ggcgcagatg atggaagact catggcgttg ggtcagcaac
     3181 aacccaaatg gctacgacga ttaagttgac ctgatacagg ccgtctgaaa gagatgtttt
     3241 cagacggcct ctttatctga aaaacacaca ttctgtctgc tataatctgt ttatattttt
     3301 tggctatcct ctgaaattta tgagaaa
//
LOCUS       DAXHKG010000168         3313 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.168, whole genome shotgun sequence.
ACCESSION   DAXHKG010000168 DAXHKG010000000
VERSION     DAXHKG010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.168"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..372
                     /locus_tag="ACFMWP_001911"
     CDS             <1..372
                     /locus_tag="ACFMWP_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HFC5892454.1"
                     /translation="RLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGL
                     NVISHKILGKDHAQVEFEAYFQDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQP
                     CICGSGKKFKACCGKYLQPVA"
     gene            375..596
                     /locus_tag="ACFMWP_001912"
     CDS             375..596
                     /locus_tag="ACFMWP_001912"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892455.1"
                     /translation="MPSERSDGIFNAQKKPFIPRVSMNGQYIAGKRLTCCTAEKGETT
                     VLTSKSIVPLLMLKNINFENILTNISGTY"
     gene            complement(590..1384)
                     /locus_tag="ACFMWP_001913"
     CDS             complement(590..1384)
                     /locus_tag="ACFMWP_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC5892456.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDEFWSGQHVFKRSVIAALEPNLFERWVRWIRENQ"
     gene            1593..2318
                     /locus_tag="ACFMWP_001914"
     CDS             1593..2318
                     /locus_tag="ACFMWP_001914"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HFC5892457.1"
                     /translation="MPRFHLPENLSIGQTVNLPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAGAEILHEETADAESPLNITLIQSISSGERMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          910 a          941 c          731 g          731 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat acatcatcgc tactaccgtt
       61 ccggcgcaac aggcattcct cgatgccgcc gaactgatgc aatggagtat agaaaccgaa
      121 gggctgggct tgaacgtcat ctcgcacaag atactcggca aagaccacgc ccaagtcgaa
      181 tttgaagcct acttccaaga cggacaacac cgatccgcac atcacgaact gtccggcttc
      241 gtcaacatcg gcggacaatg gtatttcatc gatccgactg ttccgcatcc tgcgatgaaa
      301 caaccctgca tttgcggatc gggcaaaaaa ttcaaagcct gctgcggcaa atatctgcaa
      361 cctgtcgcat aaaaatgccg tctgaacgtt cagacggcat tttcaacgcg caaaaaaaac
      421 cattcatacc aagggtaagt atgaatggtc aatacattgc gggaaaacgt cttacttgct
      481 gcactgccga aaagggagaa acgacagtgt taaccagcaa aagcattgta cctttattaa
      541 tgttaaaaaa cattaatttt gaaaatatat taacgaatat atctggaacc tactgatttt
      601 cccttatcca cctgacccag cgttcaaaca aattaggttc gagtgcagca ataaccgaac
      661 gtttgaacac atgctgtccg ctccagaatt catcgccttc caatgtcgtc agcctgccgc
      721 ccgcctcctc gaaaatcaac gcacccgcag cataatccca cagcttctgc ccgccgtgaa
      781 cataaacatc ataacgcccg caagccagat aacaccagtc cagcgtgctg ctgcccatac
      841 tccgtatcgt tccaaaaggc gcgagcgtac tcatgcggct ggaaagtttg cccgaacgca
      901 gatatttgat ttccacgccc gcaatcgcct cattgagttt tttatccacg agacgcaaag
      961 gcaggcgcgt cccgtttaaa aacgccccct gcccccgttc ggcataaaaa cattcgccgc
     1021 tgaccggatt gtagattacg cccaactcgg cacgcccgtt gcggacaaac gccaccgaca
     1081 ccgcaaaatg cggcagcccg ttgacaaaat tatttgtccc gtctatcgga tcgacaatcc
     1141 acagcccctt ttcccccgaa tattgttccc acaaagccga ctgttcctgc cgcgacattt
     1201 cctcgcccaa catcgggcaa tcgatcagaa gcggcaacgc ggcggcaaaa gccgtctgcg
     1261 cggcaatgtc cgcctcgctc aacatcgaac cgtcttcctt gcggtgggat ggcgtattca
     1321 aaaaacgcgg cataatttcg gtttgcgcga tatggcgcac gactttctgc aaacggtgta
     1381 acacttccta ctgtcctcat attttgaact tgcggcgcgc gaacgtatat agtggattaa
     1441 atttaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg caaggcgagg
     1501 caacgctgta ctggtttaaa tttaatccac tataatgtcc gtttccatca cgccgctgcg
     1561 acagattata accgtccgaa ccgccaaaaa ctatgccccg attccacctg cccgaaaacc
     1621 tttccatcgg acaaaccgtc aacctgcccg acaacatcgt ccgccacctc aacgtcctgc
     1681 gcgtccgccc caacgaaaac atcaccctct tcgacggcaa aggcaaggca cacgccgcac
     1741 ggctgaccgt tttggaaaaa cgccgcgccg gggcggaaat cctgcacgaa gaaaccgccg
     1801 atgccgagtc cccgctgaac atcacgctca tccaatccat atcttccggc gaacgtatgg
     1861 actttaccct gcaaaaaagc gtcgaactcg gcgtaaccgc catacagccc gtcatcagcg
     1921 aacgctgcat cgtccgcctc gacggggaac gcgccgccaa acgcctcgca cgctggcagg
     1981 aaatcgtcat ctccgcgtgc gaacaaagcg gcaggaacac cgttcccccc gtactgccca
     2041 tcatcggcta ccgtgaagca ctcgacaaaa tgccgtctga aagcaccaag ctgattatga
     2101 gcatcaaccg cgcccgcaaa ctcggcgaca tccgccaccc gtctggcgca atcgtcttta
     2161 tggttgggcc cgaaggcggc tggacagaac aggaagaaca acaggcattt gaagctggct
     2221 ttcaggcggt tacactcggc aaacggattt tacgcacaga aaccgcccca ctcgccgccc
     2281 tcgccgccat gcagacgctt tggggcgatt tcgcataaac agaaatgccg tctgaaaccc
     2341 gttcagacgg cattttgcag ccgattaaga tagtaggttc aaataagatt tcccgtgtcg
     2401 tcattcccgc gaaagcggga atctagaaac gaaaaactac agggatttat ccgaaacaac
     2461 aaccctctcc gccgtcattc ccgcaaaagc gggaatctag aaacgaaaaa ctacagggat
     2521 ttatccgaaa caacaaaccc tctccgccat cattcccgca aaagcgggaa tctagaaatt
     2581 taatgttgcg gtgatttatc ggaaatgact gaaactcaac gaaccggatt cccactttcg
     2641 cgggaatgac gaagtggaag ttacccgaaa cccaaaacaa gcgaaaccga acggactgga
     2701 ttcccgcctg cgcgggaatg acgagatttt aggtttctat ttttggtttt ctgttctcgc
     2761 gggaataacg gaattttaag ttttaggaat ttgtcggaaa aacagaaatc ccccgccgtc
     2821 attcccgcaa aagcgggaat ctagaaattt aacgttgcgg tgatttatcg gaaatgactg
     2881 aacctcaacg gactggattc ccgcctgcgc gggaatgacg aattttaggt ttctgttttc
     2941 aggtttctgt tttcaggttt ctatttttgg ttttctgtct tcgtagaaat gatgaaattt
     3001 taagttttag gaatttgtcg gaaaaacaga aatcccccca ccgtcattcc cgcgcaggcg
     3061 ggaatctgga aatttaatgt tgcggtgatt tatcggaaat gactgaaact caacagactg
     3121 gattcccgcc tgcgtgggaa tgacgagatt ttaggtttct gtttttggtt ttctgttctc
     3181 gcggaaataa cggaatttta agttttagga atttatcgga aaaacagaaa tccccccgcc
     3241 gtcattcccg cgaaagcggg aatctagaaa cgaaaaacta cagggattta tccgaaacaa
     3301 caaaccctct ccg
//
LOCUS       DAXHKG010000169         3290 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.169, whole genome shotgun sequence.
ACCESSION   DAXHKG010000169 DAXHKG010000000
VERSION     DAXHKG010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.169"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            1..750
                     /locus_tag="ACFMWP_001915"
                     /pseudo
     CDS             1..750
                     /locus_tag="ACFMWP_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            747..1307
                     /locus_tag="ACFMWP_001916"
     CDS             747..1307
                     /locus_tag="ACFMWP_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HFC5892458.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            1318..>3290
                     /locus_tag="ACFMWP_001917"
     CDS             1318..>3290
                     /locus_tag="ACFMWP_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
                     /protein_id="HFC5892459.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGNQEIGGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLSTAVGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVRNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGMTAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQNLQDKADRAHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
BASE COUNT          806 a         1068 c          890 g          526 t
ORIGIN      
        1 cctgcaagtg cgtatcggcc agcgttttta ccgcactacc gcccgcgccg ttatcggcag
       61 cggcggcacg gcggaaatac cggcaatcgc cgacgagccg ggcgcggccg ccaatgtggc
      121 gacggcgagg cgcaactgat ggccgccccc gtcggtgtgg ccaccgaatg ccgccttacc
      181 gtacaaggcg gcaccgaccg agaaagcgat gcctcactgc tggcgcgtct gttgaaaatc
      241 atccgccgac cgcccgcagg cggcaaccgt tacgactata aaaactgggc gttgagtgtt
      301 gacggcgtaa ccagcgcata tgtttatccg ctgcgccgcg gcttgggtac ggtggatatt
      361 gccattacct ccgccgacgg tgtgccatcg gaagaaactg tgcgccgcgt acaggcttat
      421 atcgacgaga tgcgcccggt aacggcaaaa aatgcgctgg tactcaagcc aaccgtaacg
      481 gcggtgcctg ttaccgtgca agtcaagctc gacggcatcg acttggacga ggccaagcgc
      541 cgcatacgga cggccctaaa agaatatttc gacaccctga tccccggcga cggcctgact
      601 gtgtcgcaaa tcgaggcggc tatcagcaat gtggatggtg tgatcgaccg ccgtctgact
      661 gcgccgacgg ccaaccgtgc cgccgatacg gttaaccgca tcgagtggtt taaagcgggc
      721 gcgattaatg taacggagat gccgtcatga gctatcaaga catcttgcgg ggtctgttgc
      781 cccccgtgtc gtatgcccgc aatgccccgc gtgtgcgggc gcaggcagaa atagacggcg
      841 cagcgctgga tgcggtagcg gaatcggctc aaagcgttgc cgatgccgtc gacccgcgca
      901 gcgccggcca aatgctggcc gattgggagc gcgtattagg tttggacggt acgggcaaaa
      961 accgccagcg ccgtgtgttg gccgtcatgg ccaagctaaa cgaaacaggc ggcttgagta
     1021 ttccttattt tgtgcgtttg gccgaggcgg cgggctatca aatccaaatc gacgaaccgc
     1081 agccgttccg cgccggtgtc aaccgtgcgg gcgaccgtct tgcgccgcag gaaatcatgt
     1141 gggtgtggca cgttaacgtg cgcggcggca acaaccgcat tacccgattc cgcgccggta
     1201 tctcggcggc gggcgacagg ctgaccgatt acagcgatgc cgtgatcgaa agcctgttca
     1261 accgcctcaa gcccgcccac accgctatcc gatttaccta ccgataagga ctaaaccatg
     1321 caccccatcg aaacccccga taagaccttc cacgacggcg acggcgtgtc cgaattgggc
     1381 accatcctgc ccgcgtggtg gctcaaccaa gtgcaatccg agctgctggc cgtgctgact
     1441 gcggccggta tccagccgga taagtcgcag cctaatcaat tactggcagc actgaataga
     1501 ctggctgtag ttaccaccgg caaccaagaa atcggcggcc aaaaaacctt taccgcccaa
     1561 acccaattcc aaagcggcat ccatttatcc gccaaccaga cgaactggaa cggcggccac
     1621 aaagcctaca tcggcgcgga tgccgacaac gcccacatcg tcttcggcga cgacaccctg
     1681 cgcctgcacg gcgcaaacaa ccgcatttcc tacaacaacc acgacatctt ccacaaagcc
     1741 aacaaaccgc gttttgccga agacatcgaa ggcaaaccga acacactgtc cggatacggc
     1801 atcggcaatt tcaaagtcga aaccttccgg ggcgatttga acaccctcaa aacagacggc
     1861 atctattccc tgtcgacggc ggtcggcagc tccaacctgc ccgttgaaaa caccgcctgc
     1921 catatccaag tcatcgccgg cacgaaacac ggctggtgca ggcagttggg ttatcccgcc
     1981 tacacgtccg acgtgtacga acgccaccaa acgagcagcg caaacgacaa ctggtccgca
     2041 tggaaaaaac tcaattcgga cggcatcccc gtcggcgcga tcgtatcctt tcccaaagcc
     2101 gtccgaaacc ccgcaggcta tctcaaagcc aacggcacga cctttgcaca aaacaccttc
     2161 cccgacctct accgcgcctt gggcaacagc aaccgcctgc ccgatttaag ccgtaccgac
     2221 atcggcatga ccgcgtggtt tccgtccgac caaatcccga ccggctggct ggcgtttgac
     2281 gacatccgca cgcgcgtaac cgaaaccgct tatcccgagc tgtaccgtct gctgaccgga
     2341 aaatacggca gcatccaaaa cgtcccgcag gcggaagacc gctttatccg caacgcaggc
     2401 aacagcttgg cagtcggaac gaagcaggaa gacgaaatca aacggcacgt ccacaaagta
     2461 ttttcacact ggacaaacca cacagacacg gcagccgtcg gttacgaaga ccacaacgaa
     2521 aggcagagaa gcgcgctcgt atcgacttgg acggacggcg atttaaacga caacggcttt
     2581 ttaaccccgc gcccggacag caaaatggcg acaggcggcg acgaaaaccg ccccaaagcc
     2641 ctggttttaa aactgtgcat caaagccgcc gacaccttgg gcgaagccgt gttttggata
     2701 aagtcccacg gcgaaaccat caacgccggc gcgctggacg cgggcacgct ggcgcaaaac
     2761 ctccaagaca aagcagaccg cgcccacacc cacaccgccg cccaaatcca agggctggac
     2821 gaaaaaatca gcaccgccgt tgccgcgcaa ttcacacgcc aaaccatcgg cggcgtggat
     2881 attgtcagat tccccgacgg cacaatgata cagaccggca gctacaggtt cacacgaagc
     2941 ggcggcccca tcgaaaacga agtcgtcttc cccgtcgcct ttgccgacgg caacgtcaaa
     3001 tgcttcgtat ccgaacgcca ttcgggacgc gttaccggcg atcgaaggca acacaactgg
     3061 ctgtttatcc gcgcaaaaaa ccacgccgcc gccattatta ccaactggta cgaaggcagt
     3121 tgcgactgga tggccatcgg caaagccgcc tcgggaaacg ccgccagctc cccgataggc
     3181 cccgaaatac ctgaaaccaa cgaagaaccg caaagagaga gtggaagaac atcaaccgga
     3241 ccccgaaacc gccgccgccg agacggcttg ctcgaggcac tgcaagacta
//
LOCUS       DAXHKG010000170         3264 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.170, whole genome shotgun sequence.
ACCESSION   DAXHKG010000170 DAXHKG010000000
VERSION     DAXHKG010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.170"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(150..296)
                     /locus_tag="ACFMWP_001918"
     CDS             complement(150..296)
                     /locus_tag="ACFMWP_001918"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892460.1"
                     /translation="MMRNGGNLSGITENERKSGQGGEAADSTDRTEPIHLVLEHLRES
                     FSLS"
     gene            1058..3199
                     /gene="fetA"
                     /locus_tag="ACFMWP_001919"
                     /gene_synonym="frpB"
     CDS             1058..3199
                     /gene="fetA"
                     /locus_tag="ACFMWP_001919"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HFC5892461.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNAKVVLDTITVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNDNGGKT
                     VPYSALDKRSYLAKIGTSFGDDDHRIVLSHMKDQHRGIRTVREEFAVSEKNSRITIKR
                     QAPAYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVKGPNH
                     TRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSQFKIEDKTGATPAEIQK
                     NRADEATAHDYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTHDGKTVSSS
                     NLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKAERARNT
                     EIGFNYNDGTFAANGSYFWQTIKDALANPQNRHDSVAVREAVNAGYIKNHGYELGASY
                     RTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFKNPNLEIGW
                     RGRYVQKATGSILAAGQKNRDKQLENVVRKGFGVNDVFANWKPLGKDTLNVNLSVNNV
                     FNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          870 a          922 c          745 g          727 t
ORIGIN      
        1 caaaagtggg aatctagaaa tgaaaagcag caggaattta tcggaaatga ccgaaactga
       61 acggactgga ttcccgcttt cgcgggaatg acggcgacag ggttgctgtt atagtggatg
      121 aacaaaaacc agtacgtcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc
      181 tcaagcacca agtgaatcgg ttccgtccta tccgtactgt ctgcggcttc gccgccttgt
      241 cctgatttcc gttcgttttc ggttattccc gataaattac cgccgtttct catcatttct
      301 ttaacccttc gtcattcccg cgcaggcggg aatctagttt ttttgagttc cagttgtttc
      361 tgataaattc ttgcagcttt gagttcctag attcccactt ttgcgggaag gacgcggaaa
      421 ggttgctttt cgtcattccc gcgcaggctt cgtcattccc gcgcaggcgg gaatccagtc
      481 tgttcggttt cggttttttc cgatagattc ctgccgcgtt aggggttcta gattcccgct
      541 ttcgcgggaa ggacgcggaa aggttgcttt tcgtcattcc cgcgcaggcc tcgtcattcc
      601 cgcacaggct tcgtcattcc cgcgcaggcg ggaatccagt ctgttcggtt tcagtcattt
      661 ccgatagatt cctgccgcgt taggggttct agattcccgc tttcgcggga atgacgcgga
      721 aaggttgctt ttcgtcattc ccgcatttgt taatccacta tatttccgcc gttttttata
      781 gtggactaac aaaaaccagt acagcgttgc ctcgccttgc cgtactatct gtactgtctg
      841 cggcttcgtc gccttatcct gatttttgtt agtccactat acatttccga caaaacctgt
      901 caacaaaaaa caacacttcg caaataaaaa cgataatcag ctttacacaa atcccccctc
      961 tcgttaatat aaacaaaaat aattattatt tttcttatcc tgccaaacct taacggtttg
     1021 gatttacttc ccttcataca ctcaaaagga cgaacaaatg aacgccccgt ttttccgcct
     1081 cagcctgctc tcgcttaccc tggcggcagg ttttgcccat gcggcagaaa ataatgccaa
     1141 ggtcgtactg gataccatta ccgtaaaagg cgaccgccaa ggcagcaaaa tccgtaccaa
     1201 catcgttacg cttcaacaaa aagacgaaag caccgcaacc gatatgcgcg aactcttaaa
     1261 agaagagccc tccatcgatt tcggcggcgg caacggcacg tcccaattcc tgacgctgcg
     1321 cggcatgggt cagaactctg tcgacatcaa ggtggacaac gcctattccg acagccaaat
     1381 cctttaccac caaggcagat ttattgtcga tcccgctttg gttaaagtcg tttccgtaca
     1441 aaaaggcgcg ggttccgcct ctgccggtat cggcgcgacc aacggcgcga ttatcgccaa
     1501 aaccgtcgat gcccaagacc tgctcaaagg cttggataaa aactggggcg tgcgcctcaa
     1561 cagcggcttt gccagcaacg aaggcgtaag ctacggcgca agcgtattcg gaaaagaggg
     1621 caacttcgac ggtttgttct cttacaaccg caacgatgaa aaagattacg aagccggcaa
     1681 aggtttccgc aatgacaacg gcggcaaaac cgtaccgtac agcgcgctgg acaaacgcag
     1741 ctacctcgcc aaaatcggaa caagcttcgg cgacgacgac caccgcatcg tattgagcca
     1801 catgaaagac caacaccgag gcatccgcac tgtgcgtgaa gagtttgccg tcagcgaaaa
     1861 aaattcacgg ataactatta aacgccaagc ccctgcttac cgcgaaacca ctcaatccaa
     1921 caccaacttg gcgtacaccg gcaaagattt gggctttgtc gaaaaactgg atgccaacgc
     1981 ctatgtgttg gaaaagaaac gctattccgc cgatgacaaa gataacggct acgcaggcaa
     2041 tgtaaaaggc cctaaccata cccgaatcac cactcgaggt atgaatttca acttcgacag
     2101 ccgccttgcc gaacaaaccc tgttgaaata cggtatcaac taccgccatc aggaaatcaa
     2161 accgcaagcg tttttgaatt cgcaatttaa aattgaagat aaaactggtg caaccccggc
     2221 agaaatacaa aaaaaccgtg cagatgaagc cactgctcac gactacaaac tgtccaaccc
     2281 aaccaaaacc gataccggcg cgtatatcga agccattcac gagattgacg gctttaccct
     2341 gaccggcggg ctgcgttacg accgcttcaa ggtgaaaacc catgacggca aaaccgtttc
     2401 aagcagcaac cttaacccga gtttcggtgt gatttggcag ccgcacgaac actggagctt
     2461 cagcgcgagc cacaactacg ccagccgcag cccgcgcctg tatgacgcgc tgcaaaccca
     2521 cggtaaacgc ggcatcatct cgattgccga cggcacgaaa gccgaacgcg cgcgcaatac
     2581 cgaaatcggc ttcaactaca acgacggcac gtttgccgcc aacggcagct acttctggca
     2641 gaccatcaaa gacgcgcttg ccaatccgca aaaccgccac gactctgtcg ccgtccgtga
     2701 agccgtcaac gccggctaca tcaaaaacca cggttacgaa ttgggcgcgt cttaccgcac
     2761 cggcggtctg actgccaaag tcggcgtaag ccacagcaaa ccgcgctttt acgatacgca
     2821 caaagacaag ctgttgagcg cgaatcctga atttggcgca caagtcggcc gcacttggac
     2881 agcctccctt gcctaccgct tcaaaaaccc gaatctggaa atcggctggc gcggccgtta
     2941 tgttcaaaaa gctacgggtt cgatattggc agcaggtcaa aaaaaccgcg acaaacaatt
     3001 ggaaaacgtt gtacgcaaag gtttcggtgt gaacgatgtc ttcgccaact ggaaaccgct
     3061 gggcaaagac acgctcaatg tcaatctttc agtcaacaac gtgtttaaca cgttctacta
     3121 tccgcacagc caacgctgga ccaataccct gccgggcgtg ggacgtgatg tacgcttggg
     3181 cgtgaactac aagttctaaa acgcacatcc cgaaaaaatg ccgtctgaaa gcctttcaga
     3241 cggcatctgt tctgataatt tgat
//
LOCUS       DAXHKG010000171         3169 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.171, whole genome shotgun sequence.
ACCESSION   DAXHKG010000171 DAXHKG010000000
VERSION     DAXHKG010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.171"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            215..994
                     /locus_tag="ACFMWP_001920"
     CDS             215..994
                     /locus_tag="ACFMWP_001920"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC5892462.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALTEHPLVGEYGHSFRFLPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKFTPES
                     TRFMICGNPDMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(1204..2589)
                     /locus_tag="ACFMWP_001921"
     CDS             complement(1204..2589)
                     /locus_tag="ACFMWP_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HFC5892463.1"
                     /translation="MIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEVALV
                     KFEQGRVVRHEWLVNPQKPIPQFVVGLTGISDGMVADAPVFAEIAGELFSVLKGCVLV
                     AHNSRFDYTFLKHEFHRVGIGFSSPVLCSVQLSRCLYPQFYKHSLDSIIERLGIVVED
                     RHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLREQLYGLPDG
                     MGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFPALGSLHAYK
                     IKAELVGRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFA
                     NKKAARRALSSWAETYGLCPAAAGILSDGYTEDEPCPVYVSDRCDKACVRSDEQVLAF
                     AHKLPVLDWGKMHEVEITETDPLTGEKVVLHGMGGALEMDDGLWYFDKDLPDAFKAKF
                     KTDRKNIKEIG"
     gene            2707..2783
                     /locus_tag="ACFMWP_001922"
     tRNA            2707..2783
                     /locus_tag="ACFMWP_001922"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2741..2743,aa:Arg,seq:acg)
     gene            2801..2875
                     /locus_tag="ACFMWP_001923"
     tRNA            2801..2875
                     /locus_tag="ACFMWP_001923"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2834..2836,aa:Glu,seq:ttc)
BASE COUNT          867 a          932 c          621 g          749 t
ORIGIN      
        1 gcagcccgga tgcctgatta tcgggtatcc gaggaggatt aggggggtat tggggtaaaa
       61 ttagtggata tttgaaacga aaacagccga aaacctgtgt ttgggtgtca gctgtcggga
      121 gggaaaggaa ttttgcaaag gtctcagacc gtcaatgcgg aaaaaaacac ccaaattggc
      181 tataatcccg acaaacacac tcaaggacaa caacatggca gcctcgcccg aagcaaaatt
      241 cactgaagaa aagattttgt gggtcaaaca ccacacgccg aaactcatca ctttcgccat
      301 cagccgtccc gaatcctacc gttttaaagc gggacagttc tcccgactcg gtttctacga
      361 aggggaaggc tttatttggc gtgcctactc catcgtttcc gcagaatatg ccgacacgct
      421 cgaatatttt gccgtactca tccaagacgg ccccatgtct gcccgtttcg ccaaaatgca
      481 acagggcgac accatcctgc tcgataaaaa tgccaccggc ttcctgcttc ccgaacgctt
      541 ccccgacggc aaggatttgg tgatgctctg caccggctcc ggcatcgccc ccttcctttc
      601 cattctcgaa caacctgaaa tccggcagcg tttcgatacc gtcaacctga tacattccgt
      661 atcttttccc gaagaattga ttttcaacga ccggctcgcc gcattgaccg aacatcccct
      721 ggtaggcgaa tacggacact cgttccgttt cctccctgtt accacccgtg ccgccaaccc
      781 ctcgggctta agcggaaaac gcattccgga actcttaaaa aacaacagca tcgaacaggc
      841 gctgcatacc aagttcaccc cggaatccac acggtttatg atttgcggta acccggacat
      901 ggtcaaagac actttccaaa cgctgcttga catgggttac gccatgcacc gcaaccgcat
      961 tcccggtcaa atcatgatgg aaaacggctt ctaaaaacca ccctgcttgt ccgatgcctt
     1021 cggatggacg gtcaaaccga cacggcacga aaaccgcgtc ggcaaaaatg ccgtctgaaa
     1081 agttcagacg gcatcttcgg acacattacc tgcaaacggt aacacattcc aacccaaacc
     1141 gattaggcaa tcagtacgaa cgactgttta catacttgcc ggctttcacc aaccggtatc
     1201 gatttaaccg atttccttaa tatttttcct gtccgtttta aacttcgcct taaacgcatc
     1261 cggtaaatct ttatcgaaat accaaagccc gtcatccatt tctaatgcgc cgcccattcc
     1321 atgcagaaca actttttccc ccgttaaagg atcggtttcg gtaatttcca cctcatgcat
     1381 ttttccccaa tccaagacag gcagcttgtg tgcaaacgcc aaaacctgtt cgtcagagcg
     1441 gacgcacgcc ttatcacatc ggtctgaaac atatacggga caaggctcat cctctgtata
     1501 accgtccgac aggataccgg ctgcggcagg acacaatccg tatgtttccg cccacgacga
     1561 caaagcccgt ctcgctgcct ttttattggc aaataatccg gtaggcggat tatccgtcac
     1621 accgtttttc aaagccgctg ttttcgcatt caacatgccg tctgaacctt tttcaaacct
     1681 gacggtcgta aatgttttaa gcagattttt ggcagataca taacaacccg aatgataacg
     1741 tccgaccaat tccgctttaa tcttatatgc atgcaggctg cccaatgcag gaaaaaaacg
     1801 gacttcctcc gtattgcacc aatcaaacgg ggcttttccg gaatccaata aagccgaaac
     1861 ctcgctatat acccgttcaa acgtaccgat gtaatttact tttcctccgc cgtcgaaaca
     1921 ggccagcacc cccataccgt caggcaaacc gtacaactgt tccctcaacc gttcgggcag
     1981 cgcggcaggc aacggtttcg gattcatcaa acggaaacac tgcctgatcc atgcctcgac
     2041 cccgtgttcc gacagactgt attccaaata atcgcacaat gccgatacat ccgccatcgc
     2101 acgatgcctg tcttccacaa caatccccaa cctttcgatg atactgtcca ggctgtgctt
     2161 gtaaaattgc ggatacagac accgggacag ctgcacactg cacaaaacag gcgatgaaaa
     2221 tccgataccc acacgatgaa actcatgctt taaaaacgta tagtcgaaac ggctgttatg
     2281 tgcaaccagc acacaaccct tcaataccga aaacaactcg ccggcaatct ctgcaaaaac
     2341 aggcgcatcg gcaaccatgc cgtctgaaat ccccgtcagc cccaccacaa actgcggaat
     2401 cggtttttga ggattaacca accactcatg cctcaccacc cttccctgct caaacttgac
     2461 caaagccact tcggttaccc tgtcttcata cagattgccg cccgtcgatt ccaaatcaac
     2521 cacggcaaca ggcattccaa accgtaaaaa taccttttcc agcaagggcc agcgagaagc
     2581 aacaatcatt ttattctctt taaattcaaa caacaaacca atattttaca cttttaaggc
     2641 atttcatcca acaaaacaat tgacagaatc cgatgattac cctaaaattc gaatctttct
     2701 tgcagcgcac ccgtagctca gttggataga gtatctggct acgaaccaga gggtcgggcg
     2761 ttcgaatcgc tccgggtgcg ccagtaagaa aatacaatat gcgcccatcg tctagcggtt
     2821 aggacatcgc cctttcacgg cggtaaccgg ggttcgattc cccgtgggcg tgccaaattc
     2881 taaatccccg agattatcgc tcggggattt tttattgtct cagcaactcg ttaccatatc
     2941 tttacctacc cccttcatca gaatctcaga cgtaatcgaa tcatattcaa acctttgccg
     3001 tgcaaaccga tatcccataa ccggatgcgg tgtccgtcca acattttacc cgattgaaac
     3061 gcctgatata ttgcacccca tcaacgtggc attacttttc ttaacaatcc cctttgacag
     3121 caactgacta gggctttttt atgccatcat caaatttata gtggattaa
//
LOCUS       DAXHKG010000172         3117 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.172, whole genome shotgun sequence.
ACCESSION   DAXHKG010000172 DAXHKG010000000
VERSION     DAXHKG010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.172"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(4..1104)
                     /locus_tag="ACFMWP_001924"
     CDS             complement(4..1104)
                     /locus_tag="ACFMWP_001924"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HFC5892464.1"
                     /translation="METQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDNRE
                     TRAVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFARPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADTRQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            1429..3003
                     /locus_tag="ACFMWP_001925"
     CDS             1429..3003
                     /locus_tag="ACFMWP_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HFC5892465.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
BASE COUNT          636 a          792 c          913 g          776 t
ORIGIN      
        1 cgctcaataa taatatcccg cgcccagaat acacggtttg gatgcgccgg ttgctttgtg
       61 cgggctgccg ggaatgcggt taatccaaca cgccgccaac cacgcaaatg cggctgcctc
      121 cacccattga ggatcgaggt tcagttcggc ggtgctgtgc agggaaacgc gtgtgccgaa
      181 acattctgcc aaatccgcca ttaaaacagg attgcggatg ccgccgccgc aaatatacat
      241 ttgacgggta tctgccgctg cgtgtgagac ggcgtcgaaa acggtttgcg cggtaaaacg
      301 ggaaagcgtc cgcaatacgt cgtatcggtt ttcgccgccg tcaaggtagg tttcgagcca
      361 atttagggca aacagttcgc gccccgtgct tttggggtgg ggtcgtgcga aatacgggtg
      421 ggcgagcagc ctgtcgagca gttgcggcaa tatgttgcct tgtgccgcct ttgcaccgtt
      481 tttgtcgtaa ggaagctgcc agtgtgcctg cgtccacgcg tccatcagca tattgcccgg
      541 ccctgtgtcg aagccgaagg cgggtgcgtc gggggggagt acgctgatgt tggcaatccc
      601 gccgatgttc agtaccgcgc gtgtttccct gttgtcgcgg aacagggctt cgtgaaaggc
      661 ggggacgagt ggcgcgcctt gtccgccggc cgcaaggtcg cggctgcgga agtcgccgac
      721 ggtaaaaatc cgcgtccgtt ccgccagcag cggcaaatcg gcaagctgta tgctgtaacc
      781 gtgttccggc gcgtgtcgga cggtttgccc gtggcagccg agggcggtaa tgtcggatgg
      841 tgcgaggttt tgactgcaca gcagttcggc ggcggtttgc gcgtacaggc ggctgagttc
      901 ttgcgacaaa atcctgctgc ggtgcagttc gtctgcgcct gtgtcctgca aatccagcaa
      961 ttggcggcgc agcctgtcgg gatagggggt aaaggcgtgc ccttccgcgc ccagccattt
     1021 gccgccgtcc atccgtatca gtacggcatc cgccccgtcc atgctggttc ccgacatgat
     1081 gccgatgtaa agctgtgttt ccatcatcac tcccaaactg gtgcaaaacg ccattttaac
     1141 gtgtattgac gctcgtatac cgatttgccg ccgcagtgta aataaagtgt aaataaatgt
     1201 ttcaagacgg atggaaaaat attataatgc gcccgcaaca tccagtagta gaagtgtcat
     1261 acaaaccgtt tccggcagca gttttgcatt cggtcaggtt tgggggtatt tggatgcggt
     1321 tcagaaggaa ggatgcgtct gccatatccc gaaacggcag ttcgaccgga ggcagcagta
     1381 cagtgtcggc aacactcatg atttccacca cattaaagga agattgccat ggctcaaatc
     1441 caaatgagcg caaatgttaa aaccatcaac gccgtctttg ccgccatgct ggtaggtaca
     1501 gtcggctatt ttatttattg gggcttgggt tatacccatt acaattacgc cgccttattc
     1561 attattgcca cgatgttcgg cgtgtttatg gcgttcaaca tcggcggcaa cgatgttgcc
     1621 aattctttcg gcaccagcgt cggtgcgggt acgctgacca tcccgcaggc tttgctgatt
     1681 gcggcggtat ttgaggtcag cggcgcggtc atcgcgggcg gcgaggtaac caataccata
     1741 cgcaaaggca tcgtcgattt gaagggtgtt gatttcgaac ccatacagtt tgtgtttatt
     1801 atgatgtccg cgcttttggc ggcggcgttg tggctgttgt ttgcctcgaa aaaagggctt
     1861 ccggtatcta ccacccattc cattatcggc ggcattgtcg gcagcgcggt atgtatggcg
     1921 gtaatgaacg atgccgcatc gggcgatttg atacgttggg gcaagctggg cggtattggt
     1981 gtttcttggg tattgtcgcc cgtgttgggc ggcgcggtgt cctatttcct gttttcgcgc
     2041 gtcaagaaaa acgtcttaga ttacaacgct tgggcggaag gcacgctcaa gggcatcaag
     2101 caggaaaaaa aggcctataa agaacggcac cgcctgtttt tcgagggttt gtccgaagcc
     2161 gaaaaagtcg agtacgccac caaaatggcg cacgacgcgc aaatttacga cgaacccgaa
     2221 ttcgatccgc aagagctgca atcggagtat taccgcggtc tttatgcgtt cgacaaccgt
     2281 aaaaacaatg tcgattccta caaagcactg cattcttgga ttccctttat cgcttcgttc
     2341 ggcgcgatga tgatttccgc tatgctgatt ttcaagggct tgaaaaacct gcatttgggg
     2401 atgagcaacg tcaacagctt cctgaccatc tttatgatag gcgcggcggt gtggatgggg
     2461 acgtttgtgt ttgccaaaag cctcaagcgt aaagacttgg gcaaatcgac ctttcagatg
     2521 ttttcatgga tgcaggtctt taccgcctgc ggcttcgcat tcagccacgg ggcgaacgat
     2581 atcgccaacg ccatcggtcc gtttgccgcg attatggatg ttttgcgtac caacagcgtt
     2641 gccgcgcaaa atgtcgtccc cccgattgcg atgctgactt tcggcatcgc gctgattgtc
     2701 ggtttgtggt ttgtcggtaa agaggtgatt aaaaccgtcg gtacgagttt ggcggaaatg
     2761 caccccgcct cgggttttac cgccgaactg tccgccgcat ccgtcgtgat gggcgcgtcg
     2821 ctgatggggc tgcccgtgtc cagtacgcat atcttggtcg gcgcggtact cggcatcggt
     2881 ctggtcaacc gcaatgccaa ctggaaactg atgaagccca tcggtttggc gtgggtcatt
     2941 accctgcctg ccgccgccgt attgtcggtt gtctgctact tggttttaca ggcagtattc
     3001 tgattgtaaa atactgatgc cgtctgaacc cgtgttcaga cggcattttg ttgatggaat
     3061 gtgcgggctt gtgccttatg cacaatctgt tctgtcggga tatgccgttt ggtatag
//
LOCUS       DAXHKG010000173         3101 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.173, whole genome shotgun sequence.
ACCESSION   DAXHKG010000173 DAXHKG010000000
VERSION     DAXHKG010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3101
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.173"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..211)
                     /locus_tag="ACFMWP_001926"
     CDS             complement(<1..211)
                     /locus_tag="ACFMWP_001926"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892466.1"
                     /translation="MLPTRKTARKIQARHIALPFSGKPQFYRPQERLSKQAQATPPGH
                     FRFHRLSVVRIMQQHHQRITLFGRQQ"
     gene            271..894
                     /locus_tag="ACFMWP_001927"
     CDS             271..894
                     /locus_tag="ACFMWP_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFC5892467.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1005..2387
                     /locus_tag="ACFMWP_001928"
     CDS             1005..2387
                     /locus_tag="ACFMWP_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC5892468.1"
                     /translation="MARDNRIQMFPHEWRTSTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLIAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQEGLYRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2391..2915
                     /locus_tag="ACFMWP_001929"
     CDS             2391..2915
                     /locus_tag="ACFMWP_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC5892469.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          623 a          839 c          937 g          702 t
ORIGIN      
        1 cctgctgccg cccgaaaagc gtgatgcgct gatggtgctg ctgcataatc cggacgacgg
       61 ataaccggtg aaaacggaaa tgcccgggcg gtgttgcctg tgcctgtttg gacaagcgtt
      121 cttgagggcg gtagaattga ggtttgcccg aaaagggcag ggcgatatgc cgcgcttgga
      181 ttttgcgcgc ggtttttcgc gttggaagca atcattgtct gtttgaatat ttaatgccgt
      241 ctgaaacgtc cggacgcgcc cccgttccct atgaaaaaac cgaccgatac cctacccgtt
      301 aatctgcaac gccgccgcct gttgtgtgcc gccggtgcgt tgttgctcag tcctctggcg
      361 cacgccggcg cgcaacgtga ggaaacgctt gccgacgatg tggcttccgt gatgaggagt
      421 tctgtcggca gcgtcaatcc gccgaggctg gtgtttgaca atccgaaaga gggcgaacgt
      481 tggttgtctg ccatgtcggc acgtttggca aggttcgtcc ccgaggagga ggagcggcgc
      541 aggctgctgg tcaatatcca gtacgaaagc agccgggccg gtttggatac gcagattgtg
      601 ttggggctga ttgaggtgga aagcgcgttc cgccagtatg caatcagcgg tgtcggcgcg
      661 cgcggcctga tgcaggttat gccgttttgg aaaaactaca tcggcaaacc ggcgcacaac
      721 ctgttcgaca tccgcaccaa cctgcgttac ggctgtacca tcctgcgcca ttaccggaat
      781 cttgaaaaag gcaacatcgt ccgcgcgctt gcccgcttta acggcagctt gggcagcaat
      841 aaatatccga acgccgtttt gggcgcgtgg cgcaaccgct ggcagtggcg ttgattttga
      901 acccgcgccg caaccgaaat acggcgaatc ctgtataatc cgaaaatctg ttcactggaa
      961 gttcagacgg cattgcaact gttgatgccg tctgaaaaaa tatgatggca agagacaacc
     1021 gcatccaaat gtttccgcac gaatggcgca ccagtacgac gctttccggc gtgtacgcgc
     1081 tgcgtatgct gggtatgttc ctcgtgctgc ccgtattggc ggtgtatgcc gcctcgctgc
     1141 ccggcgcgga aggcaacaaa acgctggtcg ggctggcaat gggcatttac gggctgacac
     1201 aggctctgct gcaactgcct ttgggcatcg cttccgacaa gttcgggcgc aagaaaacca
     1261 tttatgtcgg gctgattgtg tttgcagcgg gcagcttcct tgccgccgcc gccgatacgc
     1321 tgcccatgct gatcgccgca cgcgccatac agggtgcggg agcggttagt gcggcggtta
     1381 ccgcgctgct ggcggatttg acgcgcgacg gcgtacgtac ccgcgcaatg gcgatgatcg
     1441 gtttgagtat cggtctgacg ttttcggtca gcctcgtcgt tgcccctgtg attgccgacg
     1501 cggtgggcgt acgcggcttg tttctgctga ccggtatttt gaccgttgcc agtatcggcg
     1561 tggtggcgtg gatgactccc gacccggagg tttccaagct gcacgaagat acgcaggcgc
     1621 agccttcgcg cataggcgaa gttttgaaaa accgtaggct gctgacgctc gatttcggca
     1681 ttttcgccct gcacgccgcg caaatggcat tgtttaccgc gctgcctttc gcgatgaccc
     1741 agctcggttt ggaaaaaata cagcattgga aagtctatct gccctcgacc attacgggct
     1801 tggtggtgat ggttccgctg attatcgtcg gcgagacgcg caacaagctc aaacaggttt
     1861 ttgttttggg tatcgtctgt attgcggcgg cgcagctcgg tttgctgtcc ggtatgcgct
     1921 cggtaggctt gattaccgct tatttggttg tttactttat cggttttaat gtgttggaag
     1981 cgagcctgcc gtctatggtt tccaaaatcg cgccgtccga cctgaagggt acggcgatgg
     2041 gcgtgtacaa cacgatgcag tcgctcggac tgtttgccgg cggcgcggca ggcggtttgc
     2101 tgtttcaaaa atacggcttt tccggcgtgt ttgccttttg cagtatattg atgctgctgt
     2161 ggctggtaat tgccgtttta tcgcctgcgc ccaagcccgt caaaaacctc agttaccctg
     2221 tcggcggcgt gtggcagggc aatcaggaag ggttataccg cgccttgtcg gagcttgagg
     2281 gtgtggaaga catcggtttc agtttcgacg ggcagaccgt ctatctcaaa gtgttgcaga
     2341 agggtttcga tcaggctgcc gctgaaaaaa tcatcacagg agtttaaaaa atgtcattga
     2401 acaaagtcat cctcatcggc cgcctcggac gcgatcccga agtgcgctat atgcccaacg
     2461 gcgaggcggt ttgtaatttc agcgtcgcca ccagcgaaac ttggaacgac cgcaacggcc
     2521 aacgtgtaga gcgtactgag tggcacaaca tcaccatgta ccgcaaactg gcggaaattg
     2581 ccgggcaata cctcaaaaaa ggcgggctgg tttatctgga aggcagaatc caaagccgca
     2641 aataccaagg caaagacggc atcgaacgca ccgcttacga tattgtcgcc aacgaaatga
     2701 aaatgttggg cgggcgcaat gaaaacagcg gcggtgcgcc ttacgaggaa ggttacggtc
     2761 agagtcagga ggcttaccaa cgccccgcgc agcaaagccg gcagcccgcc tccgacgcgc
     2821 cgtcccatcc ccaagaagca ccagccgcgc cgcgccgcca acccgtgcct gccgccgccc
     2881 cggtcgagga cattgacgac gatatcccgt tctgaatttt acggccggac atcctcgcgg
     2941 agggaaatca taaaggacgg agaaacctta aaccttacgg ggcagggttt ctcttttttg
     3001 catttgggcc ggcttgttgc cgccctttgc gttgggcgga acgttgcgat tgcgccgttc
     3061 gggcgttttg aggcagtgat gcctgccgca cgtccccgct g
//
LOCUS       DAXHKG010000174         3097 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.174, whole genome shotgun sequence.
ACCESSION   DAXHKG010000174 DAXHKG010000000
VERSION     DAXHKG010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.174"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(311..787)
                     /gene="greA"
                     /locus_tag="ACFMWP_001930"
     CDS             complement(311..787)
                     /gene="greA"
                     /locus_tag="ACFMWP_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HFC5892470.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKELQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            1182..2483
                     /gene="aroA"
                     /locus_tag="ACFMWP_001931"
     CDS             1182..2483
                     /gene="aroA"
                     /locus_tag="ACFMWP_001931"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HFC5892471.1"
                     /translation="MTESVRLPVARLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVQIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2526..3059)
                     /locus_tag="ACFMWP_001932"
     CDS             complement(2526..3059)
                     /locus_tag="ACFMWP_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC5892472.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          649 a          829 c          841 g          778 t
ORIGIN      
        1 attttaggtt tctgattttg gttttctgtt tttgagggaa tgacgggatg caggttttct
       61 taaccctgcg tcctagattc ccgcttttgc gggaatgacg gcgacagggt tgctgttata
      121 gtggatgaac aaaaaccagt acggggttgt ctcgccttag ctcaaagaga acgattctct
      181 aaggtgctga agcaccaagt gaatcggttt cgtactatct gtactgtctg cggcttcgtc
      241 gccttgtcct gatttttgtt aatccactat aatttcctgc gtgtgtcggg tgtatcgaaa
      301 tcaagccgaa tcaaatatat cggacttcga taatgtcgta ttcgcgcacg ccgcccgggg
      361 cttggacttc cgccgtatcg ccctcttcct tgccgattaa ggcgcgggca atcggtgagc
      421 cgacatagat tttgccctgt ttgatgtcgg cttcgtcttc gccgacaatt tgataggtaa
      481 cgtgttcttc cgtttccaaa tcttccagcg taaccgtcgt accgaacacg attttgcctt
      541 cggcgtggat ttcggtcgga ttgatgatgt gggcaacgga aagtttgtgt tccagctcgg
      601 aaatgcggcc ctcgataaag ccttggagtt ctttggcggc ttcgtattcg gcgttttcgg
      661 acaaatcgcc gtgcgaacgg gcttcggcaa tcgcttcgat cacttcggga cgcgccacgc
      721 ttttgagctg ctgcaattcc tgtttcagca attccgcacc gcgtacggtc agggggattt
      781 tttgcatcgg tcttttttct ccatattccg gcacaccgtt ttgcggcagc aagcataccg
      841 cgtaccgtct tgttttgtgc gtccggatat taaaataaaa atacaagccg cccggaaaat
      901 cggcggcttg tctgtcgttg aacagcggct attctaccaa attctatgaa attggcaatc
      961 gtgccgtgcc gccgacaaac gcgccatgtc cgcaacaaaa gctgaaaata tgccgtcaaa
     1021 gaaattttag aaacaaaaaa tttaaaaata atcaattttc ggcataaaaa accacattta
     1081 cggactttaa aaccgaaaat gccaagcctg agatttttca tacagcattt gcaccagtat
     1141 aatgcaggct gtttttatct ttataatatt gacgttttgc catgaccgaa tccgtccgcc
     1201 tccccgtcgc ccgtctcaaa ccttccaccg tcgccctgcc cggctccaaa agcatcagca
     1261 accgcaccct gctgcttgcc gccttgtccg acaatgcttg cgaaatccat tccctgctca
     1321 aatccgacga taccgaccgt atgctcgaag cactcgataa actcggcgtt caaatcgaat
     1381 atcttgccga agaccgtctg aaagtgcacg gcacaggcgg acgcttcccc aaccgcactg
     1441 ccgatttgtt tttgggcaac gcgggcacgg cgttccgtcc gctgactgcc gcacttgccg
     1501 ttttgggcgg cgattatcat ctgcacggcg tgcctcgtat gcacgaacgc cccatcggcg
     1561 atttggccga tgcgctgcgg attgccggcg ccgatgtcga atatctcggc aaggaacact
     1621 atccgccgct tcatatcggc aaacgtcaag acaacggcga acgcgtgatt ccgattaaag
     1681 gcaatgtgtc cagccagttt ctgaccgccc ttttaatggc gttgccgctg accgggcagg
     1741 cgtttgaaat ccgtatggtc ggcgaattga tttccaagcc ctatatcgac attactttaa
     1801 aactgatggc gcaattcggc gtacaggttg ccaatgaaaa ctaccgcgtc ttcaaaattc
     1861 ccgccgatgc gcactaccac gcgcccgaac acttgcacgt cgaaggcgat gcctccagcg
     1921 cgtcctactt cctcgcagcc ggtttgattg ctgccacgcc cgtgcgcgtg accggcatcg
     1981 gcgcaaacag catacagggc gatgtcgcct ttgcccgcga gctggaaaaa atcggggcgg
     2041 acgtggtttg gggcgaaaac ttcgtcgaag tttcacgccc gaaggaacgt gccgtccaat
     2101 cctttgattt ggatgcgaac catatccccg atgccgccat gaccctcgcc atcgtcgcgc
     2161 ttgctacagg gcaaacctgc acgctgcgca acatcggttc gtggcgcgtc aaagaaaccg
     2221 accgcatcgc cgcgatggca aacgagttgc gcaaactcgg ggcaaaagtc gtcgaagaag
     2281 ccgaagcaat tcacatcacc ccgcccaaaa cgctgacacc cgacgccgtc atcgacacgt
     2341 acgacgacca ccgcatggcg atgtgtttct cgctggtttc gctgttgggc gtacccgtcg
     2401 tcatcaacga tccgaaatgc acccataaaa ccttcccgac ttatttcgac gtgttctctt
     2461 cactgaccga aacaacggaa taaggcggca ttttgccgcg attccggcgc ggcgcggcgg
     2521 gcggctcatt ctgtaaagaa agtatgtgcg ccgaggtagt ttttggcgta aaacggtgtg
     2581 gagagttttt cggttttgat ggttttgccg ctgctggggg catggatgaa ttcgccgttg
     2641 ccgatataga gtccgacgtg tgagtagcgg tgtgtgccgc cggtgttgaa gaatacgagg
     2701 tcgccggcct taaggcggct gtcggggatt ttgcggcttg ccgccgccat gtcgcgggcg
     2761 gtgcgcggca gcttgacgtt gagggcgttt ttgtaaacga attgaatcat gccgctgcaa
     2821 tcgaagccgg ttgcggtgct gctgccgccc catttgtagg gcgtgccgat gagtccgagg
     2881 ctgtggagca tgagttcctg cgagccttgt gtgcggtcga tgtggctgat gcggacggct
     2941 tggatttgcc ggactgtctg tttgggtttc ggttggcggt gtttgccgga ggtcgtgccg
     3001 catgaggcga ggagcagtgc gctgagacag aggaaaaggg ttttgtcggg gggaaacatg
     3061 gtttttcctt tgcgggttcg gatatccgtc tgaaggt
//
LOCUS       DAXHKG010000175         3087 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.175, whole genome shotgun sequence.
ACCESSION   DAXHKG010000175 DAXHKG010000000
VERSION     DAXHKG010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.175"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            157..786
                     /locus_tag="ACFMWP_001933"
                     /pseudo
     CDS             157..786
                     /locus_tag="ACFMWP_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(833..2242)
                     /gene="dacB"
                     /locus_tag="ACFMWP_001934"
     CDS             complement(833..2242)
                     /gene="dacB"
                     /locus_tag="ACFMWP_001934"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HFC5892473.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGISDTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDIADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            2407..2973
                     /locus_tag="ACFMWP_001935"
     CDS             2407..2973
                     /locus_tag="ACFMWP_001935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HFC5892474.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTVFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          759 a          718 c          825 g          785 t
ORIGIN      
        1 ccgtccacat atagtggatt aaatttaaac cggtacagcg ttgcctcgcc ttagctcaaa
       61 gagaacgatt ctctaaggtg ctcaagcacc aagtgaatcg gttccgtgct atttgtactg
      121 cctgcggctt cgtcgccttg tcctgattta aatttaatcc actataaact cattgaactg
      181 tttgtcgcag gcgtaactgc aagaaaggca gcagagttag taggcgttaa taaaaatacc
      241 gcagcctatt attttcatcg tttacgatta cttatttatc aaaacagccc acatttagaa
      301 atgtttgatg gcgaagtaga agcagatgaa agttattttg gcggacaacg caaaggcaaa
      361 cgtggtcgcg gtgctgccgg taaagtcgcc gtattcggtc ttttgaagcg aaatggtaag
      421 gtttatacgg ttacagtacc gaatactcaa accgctactt tatttcctat tatccgtgaa
      481 caagtgaaac ctgacagcat tttttgtagc tatgatgtat tagatgtgcg cgaatttagc
      541 cattttagct tcgctgaaac ttcgttttcg tatcaatcac agcacacatt ttgccgaacg
      601 acaaaaccat attaatggaa ttgagaactt ttggaatcaa gcaaaacgtc atttacgcaa
      661 gtttaacggc attcccaaag cgcattttga gctgtattta aaggagtgcg aatggcgttt
      721 taacaacagt gagataaaag ttcttgttcc atcttaaaac aattagtaaa accgagttta
      781 tcctagttat ctaggacagc cccttaaatt taatccacta tattttcctg tttcaggctc
      841 ggcgttcttt gcacatcagt ttcgcatcca gccagccgtc gccgccggag atgatgtttt
      901 tggcaacgaa gttgtccaag tcgggcagca gggaaacggc gcggccgctg ttgatgatga
      961 cgaccaccgc catcggtttg tcgcccagcc aataacctgc aagggcgcgg acattgttga
     1021 gcgtgccggt ttttaagcgc aacagcccgc cgctttgttt gaagcggttg cgtaaagttc
     1081 cgtctgtgcc ggcgatgggc agcgtgtcga tgaaatcttg tgcaaacggg ctgaaataag
     1141 ccgtttccaa catttgcgcc atcattctcg ccgttaccct ttcttttctg gacagacctg
     1201 aaccgttttc caaaaccaaa tccgcaatat cgatgcccga cacggcaagt tcgcgccgga
     1261 cggcagacgc cgcctgttcg gaaacggcgg gcagtttgcc gtcgccgccg agtttgagga
     1321 agacggaacg cgcaattaga ttgtccgaac gcttgttcat gtccgtcaaa atttccttca
     1381 tcggctttga gtgtgcaacg gcaagcgtct gcgcgccttc cggcgtgtcg gatatgccga
     1441 tgccgtctga aatccgtccg ccgccgagca gccagtggtt ggtaaaactt tgccggatca
     1501 gttcgtcaag cgcgaacatc cggacaccga caggcttgcc caaacagctc tcgggaatat
     1561 tgccgcgcaa tttcagcgta ttgtccgaaa aagatgcacg catcagtttt ttgatcgaag
     1621 ggcaggcagc ttgggaggcg gtaattttca agttgttttg ggcgaaaata tgcggcaaag
     1681 gcggatcggt gaggatgtcg gtactgtcgg cggcattgcg ttcggcgcgc accataacca
     1741 taccggcaga cagcatagtt ggattggggg gcgtcataaa cggcgaaccg ctgtcggctt
     1801 cgaaatcgtc ggggctgccg acttcgcccc acaggctgtg gtcgagcatc aggtgtcccg
     1861 tgatattgcg tatgccttgt tcgcgcaact ggcgttggac ggcaagcagg ttttcctgat
     1921 tgaaaacggg gtcgccgctg cccgcccaat acaggtttcc gtcaagcgtg ccgtcgttta
     1981 ccgtaccgtt gcttttaaac tcggtcgccc agcggtaatt gctgccgaag gttttgaagg
     2041 cggcaaacgc ggtaacgagt ttcattgtgg aggcggggtt gacggggaca tccgagcggt
     2101 ggtcaatgat gacttttccg ctgtcaagct cttggacata tacggcgatt tcgttttgcg
     2161 gaatgcgacc tgtatcgagc gcgtgtgcgg cgagggaggc gagaagcagc agcagggagg
     2221 ccgctgtttt ggggaaattc ataggtaaat ctgttacata aaaaaagcaa ttataaggca
     2281 aagccggata agtgggaacg ctgtggcggc gggccggctt gtttgcaggg gaaatcacat
     2341 atataataat cgctatcatt atgaaatgat tgagacgcac aaacttaata ttcaggagga
     2401 atgattatgg ctaagaaaat cagtattttg gtgggcagcc tgcgccgtgc ttcttttgcg
     2461 cgcaaagtgg cattgaatgc ggcggagatg ttccccgaag gctggcaggc ggaaatcgtc
     2521 gaaatcggac atctgccgct ttacaatttc gattatgacg accctgcggt ggaagatgtg
     2581 ccgctgcccg aaagctacac ggttttccgc gaaacgatta aggcttcgga cggcattttg
     2641 ttcgttacgt ccgaaaataa ccgcaccatt cccgcctgtt tgaaaaatgc ggtggacatc
     2701 ggctcgaaac cgaatgccga cgtggcgtgg aaaaacaaac cggccggcat catcagccat
     2761 tccgtcggca agatgggcgg ttacagttcg caaaaaaacc tgcgccttgc gctgtcttat
     2821 ttcgatatgc ccgtaaccgg acagccggaa gtgtttttgg gcaattcgcc gacactgttt
     2881 gatgaaaacg gcaaattgat cgactcggca agggattttg ttcagtcata tattaatcag
     2941 tttgtcggtt tgattgaaag aaatgccaaa taaacaaaca agtcgaaagg ccgcaaaacc
     3001 ggttcgggtt ttgcggcttt tttatatggg ctgggcagcg tcaaggtttg ccgtttgccg
     3061 gataatgcgc ggcaaatgac cggcgtg
//
LOCUS       DAXHKG010000176         3078 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.176, whole genome shotgun sequence.
ACCESSION   DAXHKG010000176 DAXHKG010000000
VERSION     DAXHKG010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.176"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..260)
                     /locus_tag="ACFMWP_001936"
     CDS             complement(<1..260)
                     /locus_tag="ACFMWP_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892475.1"
                     /translation="MNMENYFSNLNLDIRTHKLGTFTDQKVTPDVLCAVAECIIEYIE
                     NIGEIFSINDIRYSDYAEYIATAVFKKPSIENAGSEYNKFFS"
     gene            complement(272..2860)
                     /gene="dcm"
                     /locus_tag="ACFMWP_001937"
     CDS             complement(272..2860)
                     /gene="dcm"
                     /locus_tag="ACFMWP_001937"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HFC5892476.1"
                     /translation="MKNQYSKSLHGVFYLAFYDKIHAFFAEQLFQLIINMNKKPTYIS
                     LFSSAGVGCYGFKTNGFECVATNELLEKRLKIQKYNQKCRFDSGYIAGDITLPETQAK
                     LFAEIRRWNTEIDVVIATPPCQGMSVANHKKNNEMARNSLVVESIKIVREVQPKFFIF
                     ENVKAFLKTPCTDTDYQEKPIEEAIWSNLGGHYNILSNVLNFKDYGANSSRTRTLVIG
                     VRKDIHHITPYDIFPKQTPPKTLRTLLADLPPLMQMGEISDDDIYHSYREFDRRMLPW
                     IAQLKEGESAFQNTDSARIPHQIKNGEIIYNQNKNGDKYARWFLDREGPCIHTRNDIL
                     ASQNTIHPTENRVFSVRELMRMMSIPPSFKWTAQDEKQLNALSFDEKKTFLKKEELNI
                     RHCIGESVPTAVLANVAQNIQAALQQSELSMTEIQNLIKRENLSLADNLYRFIEQHFD
                     AYPFSRLLQIAEYANAARSETAAYFTRIDIAFGLVNALPDFKKKKNLRILEPSVGIGN
                     FIPLLAKKYADKEKVIFDLVDIDSNSLNLLSLLLKKLNLGSKFEFNIIHQDFLTATLP
                     ENYDLVIGNPPYGKVKASDKNLALYRKNATNKDTQNIFSFFIDKALTLSKTVALVVPK
                     SVINAPEFQITRQQLITANINRIIDYGEKAFKGVKIETIAFIADQTDKDNQHITIESH
                     IQETLIQNCKNYFFSDNFPYWLIYRNSEFDQIAQKLEFNVFQSFRDRQITKAHTQNSG
                     NVRVLKSRNIGNNEIIDIEGYDSYVDSVAPFSVGKFINRKNVVMIPNLTYKPRAAFLP
                     ENSIADGSVALLTMKKHEKILTQRDLAYYATPEFEQFYRVARNYGSRSMNIDNHSVFF
                     FGLLKD"
BASE COUNT          899 a          566 c          607 g         1006 t
ORIGIN      
        1 tgtgaaaaaa atttattgta ttcgctaccg gcattttcaa tggatggttt tttaaatacg
       61 gcggtggcga tatattcggc ataatctgaa taacgaatat cgttaatgct aaatatttct
      121 ccaatatttt caatatattc gatgatacat tctgctacgg cacataatac atccggggtt
      181 actttttgat cggtaaatgt gccgagttta tgtgttctga tgtctaaatt taagttagaa
      241 aaataatttt ccatattcat tttttactcc tctaatcttt tagcaatccg aaaaaaaaca
      301 cagaatgatt gtctatattc attgaacgag aaccataatt acgggcaaca cggtaaaact
      361 gctcaaattc gggagttgca tagtatgcga gatctcgttg ggttaggatt ttttcgtgtt
      421 ttttcattgt cagtagggca accgagccat cagcaatact gttttcaggc aaaaatgctg
      481 cccgaggttt gtaagtcaga ttgggaatca tcacgacatt tttacggtta ataaatttgc
      541 cgacagaaaa aggggcaact gaatccacat aactatcata accctcaata tcaataatct
      601 cgttgttacc gatattacgg gattttaaaa cccgaacatt gccactattc tgtgtatgcg
      661 ctttggtaat ttggcgatct cggaatgatt gaaatacatt aaattccaat ttttgtgcaa
      721 tttgatcaaa ttcactatta cgataaatca accaataggg aaaattatca gaaaaaaaat
      781 agtttttaca gttttgtatc aacgtttctt ggatatggct ttctatcgta atatgttgat
      841 tgtctttgtc ggtttgatcg gcaataaagg caatcgtctc tatttttacg cctttaaatg
      901 ctttctcgcc gtaatcaata atgcggttga tattggctgt gataagttgt tgtcgggtta
      961 tttgaaactc gggggcgtta atcacacttt tgggaacaac caaagccacg gttttactga
     1021 gcgtcagagc cttatcaata aaaaatgaaa aaatattttg cgtatcttta ttggtagcat
     1081 ttttacggta tagtgccaaa tttttatcac ttgccttaac tttgccgtat ggtggattgc
     1141 cgatgactag atcatagttt tcaggcagcg ttgcggttaa aaaatcctga tgaataatat
     1201 tgaactcaaa tttactgcct aaatttaatt ttttcagcag caatgacagg agatttaaac
     1261 tgtttgagtc aatatccacc aaatcaaaaa taactttttc tttgtctgca tatttttttg
     1321 ccagtagtgg aatgaaatta ccaatgccga cagagggttc taaaatccgt aagttttttt
     1381 tctttttgaa atcaggaaga gcattaacca gtccgaaagc aatatcaata cgggtaaaat
     1441 aagcagccgt ttcgctacgg gcagcattag cgtattcagc aatttgcaaa agccgactga
     1501 atggatatgc gtcaaaatgt tgctcaataa atcggtagag attatcggca agggataaat
     1561 tttctcgttt gattaaattt tgaatttccg tcattgacag ttcggactgt tgcaaggctg
     1621 cctgaatgtt ttgtgcgaca ttggccaaaa cagcggttgg cacagattca ccgatacaat
     1681 ggcggatatt cagctcttct tttttcaaaa aggttttttt ctcatcaaat gacagtgcat
     1741 taagctgttt ttcatcttgt gccgtccatt taaatgatgg cggaattgac atcatacgca
     1801 tgagttcacg cacggaaaat acacggtttt cagtgggatg gatggtgttt tggctggcta
     1861 aaatgtcatt acgggtatgg atgcacggac cctcacgatc taaaaaccaa cgggcgtatt
     1921 tgtctccatt tttgttttga ttgtagataa tttcaccatt tttaatttga tggggaatgc
     1981 gtgcagaatc agtattttgg aaagctgact cgccttcttt aagctgtgca atccacggca
     2041 acatacggcg atcaaattca cgatagctat ggtaaatatc atcatcgcta atttcgccca
     2101 tttgcattaa aggcggcaga tcagccagca atgtacgcaa ggtttttggc ggtgtttgct
     2161 tggggaaaat atcgtacggc gtaatgtgat gaatatcttt tcgcacgcca atcaccagcg
     2221 ttctggtacg actggaattt gcaccataat ctttaaaatt tagtacattg gatagaatgt
     2281 tgtaatgtcc gcccaaattt gaccaaatgg cttcctcaat cggcttttct tgataatcgg
     2341 tatcggtgca gggtgttttt aaaaaggctt tgacgttttc aaaaataaaa aacttgggct
     2401 gaacttcccg aacgattttg attgattcca cgaccaaaga atttcttgcc atttcattat
     2461 tttttttatg gttggcaacc gacattcctt ggcaaggcgg tgtggcaatc acaacatcaa
     2521 tttcagtatt ccagcgtcga atttcggcaa acaatttggc ttgggtttca ggcagggtaa
     2581 tatcgccggc aatataacct gaatcaaagc ggcatttttg attatatttt tggattttta
     2641 ggcgtttttc taaaagttcg ttggttgcta cgcattcaaa accattggtt ttaaaaccat
     2701 agcaaccaac gcctgcactg ctaaataaac tgatgtaggt gggttttttg ttcatattta
     2761 tgatgagttg aaacaactgc tctgcaaaaa atgcgtgtat tttatcatag aaggcaaggt
     2821 aaaacacgcc atgcaatgat ttactatatt gatttttcat caaaaaagtg ctgtttgaac
     2881 agatatacag cggtgttttt tgcaatgcgt ttcaaacttg aggtacgttt ttaatagaaa
     2941 caccgtctga acgccaacct gagacctttg caaaattccc acaaatcccc caattcccac
     3001 caagacattt aggggatttc tcatgagcac tttcttccgg caaaccgccc aagccatgat
     3061 tgccaaacac atcgaccg
//
LOCUS       DAXHKG010000177         2967 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.177, whole genome shotgun sequence.
ACCESSION   DAXHKG010000177 DAXHKG010000000
VERSION     DAXHKG010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.177"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            121..1665
                     /gene="purF"
                     /locus_tag="ACFMWP_001938"
     CDS             121..1665
                     /gene="purF"
                     /locus_tag="ACFMWP_001938"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HFC5892477.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIVTAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANERSAAEIAAEIGANGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            1765..2256
                     /gene="greB"
                     /locus_tag="ACFMWP_001939"
     CDS             1765..2256
                     /gene="greB"
                     /locus_tag="ACFMWP_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HFC5892478.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            2315..2941
                     /locus_tag="ACFMWP_001940"
     CDS             2315..2941
                     /locus_tag="ACFMWP_001940"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HFC5892479.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFDRPYIK
                     AIRVQTASDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT          714 a          908 c          774 g          571 t
ORIGIN      
        1 tattctccat aaacccacct atctgtcctt cgctcaaata ttgtcaacaa ttcaggcaaa
       61 aaaccaccgt ttgctttata attccgtttt acccttaaac ctcgaatcgg agaagacgat
      121 atgtgcggcg tattaggttt ggtcagtcat gaacccgtga accagcttct gtacgacggt
      181 ttgcagatgt tgcagcacag gggacaggat gcggcgggca ttgtaacggc cgaaggcggt
      241 accttccata tgcacaaagg caaagggatg gtgcgcgaag tgttccgcac gcgcaatatg
      301 cgtgatttga ccggcaacgc cggcatcgcc cacgtccgtt atcccacggc gggcaacgcc
      361 ggcagcagcg cggaggcgca gcctttctac gtcagctcgc cgttcggcat cgttttggcg
      421 cacaacggca acctcaccaa cactgccgaa ctttatgaaa acgtgtgcaa caaacaccta
      481 cgccacgtca acaccagctc cgattccgaa gtcttgctca acgtattcgc gcacgaattg
      541 cgccgcgaag tctctaaaaa cgccgacccg caccggctca atgccgacaa tattttcaac
      601 gccgttgccg aagtccaccg cctggtgcgc ggcgcatacg gcgtggttgc catgattgcg
      661 ggctacggta tgcttgcctt ccgcgaccct tacggcatcc gcccgctggt attgggttcg
      721 caaaccgaca gcgaaggcag aaaatcctat gccgtcgcct ccgaatccgt cgccttcaac
      781 gcgcttacct acgatttgga acgcgacatc cggccgggcg aagcggtatt tgtcggcttt
      841 gacggcacaa tgattgcccg ccaatgcagc gaccgtgcca aactcagccc ctgccttttt
      901 gaatatgttt attttgcccg ccccgactct gtgattgacg gcgtatccgt ttaccaatcg
      961 cgcttggata tgggcgtgtc gctggcggaa aaaatcaaac gcgagctgcc cgtggacggc
     1021 atcgacgttg tgatgcccat ccccgacacc agccgcccca gcgcgatgga gcttgccgtc
     1081 catctcgaca aaccctaccg cgagggtttg attaaaaacc gctatatcgg ccgcaccttt
     1141 attatgcccg gacaggcgac gcgcaaaaaa tccgtgcgcc aaaaactcag cccgatggaa
     1201 accgaatttg caggcaaaag cgtgttgctg gtggacgact ccatcgtgcg cgggacgacc
     1261 agccgcgaaa tcgtcgaaat ggtacgcgcg gcgggcgcgc gcaaagtcta tatcgcctcc
     1321 gccgcgcccg aagtgcgcta tcccaatgtg tacggcattg atatgcccac gcgcgaagag
     1381 ttgattgcca acgagcgcag cgcggcggaa atcgccgccg aaatcggcgc aaacggcatc
     1441 gtgttccaaa atttgagcga tttggaagcc gtcgtcaaag cactcaatcc gaaaatcgaa
     1501 tccttcgatt cgtcctgttt caacggcatt tatcagaccg gcgacatcga tgatgcctac
     1561 ctcgaccgcc tgtctgccga gaaatccggc tgcggcggtc tgaaaatcca cccgagcagg
     1621 atggaacaca gcatcagcat cagcgatgcg ggcgacgaag aataaggctt cccaaaccgc
     1681 gatgccgtct gaaatccgaa cgccgggttt tcagacggca tttcccatat cggcatcaca
     1741 tttcccgttt catccgcaca caatatgagt accgaaacca aaaactacat tacgcccgcc
     1801 ggatggcagg cattgaaaga cgagctttat caactggtca acaaagaacg ccccgaaatc
     1861 gtccaaatcg tcaactgggc ggcaggcaac ggcgaccgca gcgaaaacgg cgactatctt
     1921 tacggcaaac gccgtatgcg cgaaatcgac cgccgcatcc gtttcctgac caagcgtttg
     1981 gagtccgccg tcgtcgtcga tcccgaattg cgcgaagcga ccgaccaagt atttttcggc
     2041 gcgaccgtcg gcctgttgcg cggcgacggg cgcgagcaaa ccgtcaaaat cgtcggcatc
     2101 gatgaaatcg ataccgcgca aaacaaaatt tcttggattt cgccgttggc gcgttgcctg
     2161 attaaagcgc gcgaaggcga cgaagtggtt ttgaacacgc cggaagggcg tgaggaaatt
     2221 gaaatccttt ctgtcgaata catcaaaatc gactgatcgg gaatgccgtc tgaaacggtg
     2281 caaacgcatc gtttcccaaa taaaggaata ccgaatgagg aaaatccgca ccaaaatctg
     2341 cggcatcacc acaccggaag acgcatcggc cgccgtagcg gcaggtgcag atgccgtcgg
     2401 gctggtcttt ttccaaggca gcagccgggc cgtcgatatt gcccgcgcca aaaaaatcac
     2461 cgccgcactg ccgccgtttg tcagcgttgt cgcccttttc gtcaacgaaa gcgcgcaaaa
     2521 catccgccgc atccttgccg aagtgccgat acacatcatc caattccacg gcgacgaaga
     2581 cgacacattc tgccgccagt tcgaccgccc ctatatcaag gccattcgtg ttcagacggc
     2641 atcagacatc cgaaacgccg ccgaccgctt ccccgacgct caggcactgc tgttcgatgc
     2701 ctaccaccct tcggaatacg gcggcaccgg acaccgcttc gactggacgc tgctggcgga
     2761 atattcgggc aaaccgtggg tgcttgccgg cgggctgacc cctgaaaacg tcggcgaagc
     2821 cgtccgcatc accggagcgg aagcggtcga tgtatccggc ggcgtggaag cgtctaaagg
     2881 caaaaaagac ccagccaaag tcgccgcctt tatcgcaacc gccaaccgcc tatcccgtta
     2941 aagcaacaaa aattgccgcc ggaatga
//
LOCUS       DAXHKG010000178         2938 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.178, whole genome shotgun sequence.
ACCESSION   DAXHKG010000178 DAXHKG010000000
VERSION     DAXHKG010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.178"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(127..1437)
                     /locus_tag="ACFMWP_001941"
     CDS             complement(127..1437)
                     /locus_tag="ACFMWP_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HFC5892480.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYKQMRRFVAENSSDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1749..2171
                     /locus_tag="ACFMWP_001942"
     CDS             1749..2171
                     /locus_tag="ACFMWP_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892481.1"
                     /translation="MEWVSLFSDPQRDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITTGKNDNGNLTVNGIYGIQSFADSQLGYTPELLVKSNNDILFKNNLQSVDVKPHS
                     GNIHLDAKGKIQFNLNVPDVDGVQDVASGKKYRQTIVP"
     gene            2257..2754
                     /locus_tag="ACFMWP_001943"
     CDS             2257..2754
                     /locus_tag="ACFMWP_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
                     /protein_id="HFC5892482.1"
                     /translation="MNVKVHKDTHHFGIHNLNNTDVHLTAEDSDNVIEIKGELADLMP
                     TGNVESTSFLRGIETAFKSNTVLTGNNNKISIATEGKGLGLGVNGLQSNSPYSGRTTG
                     IFINNQSSDLTQPSLDGISTIKLKAVKGNNEVDLNVKNHASVKGIIASHSAKATLEAE
                     GDNIV"
     gene            2859..2938
                     /locus_tag="ACFMWP_001944"
                     /pseudo
     CDS             2859..2938
                     /locus_tag="ACFMWP_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT          815 a          705 c          697 g          721 t
ORIGIN      
        1 ttaatccact ataccacgtt gtctttattg gctttatcaa taaacaggat aagacctgaa
       61 aaaaagccga tacgcctttt tggtgtaccg gctttgccat actgttctgc ttcagacagc
      121 attgcttcat tttgccttta atacttcttc gtccagcgat ttcaaccatt ccagcttttc
      181 gccgattttg atttccaacc cgcgcgggac gggttggtag aagtccggtt cgtccaagcc
      241 gtcgggcata tagctttcgc cggcggcgta ggcgttcggt tcgtcgtggg cgtagcggta
      301 ttcgcgtccg tagcccaatt ccttcattaa cttggtcggg gcgttgcgaa gatggacagg
      361 cacttcgtcg ctgctgtttt ctgcaacaaa tcggcgcatt tgtttatacg ctttgtagcc
      421 cgcgttggat ttcgcggcgg cggcaaggta caataccgct tgcgccaaag ccagttcgcc
      481 ttcgggcgag cctaagcgtt cgaaggtggc ggcggcatcg ttggcgattt ggaaggcgcg
      541 cgggtcggca agcccgatgt cttcccaagc gatacgcacg atgcggcggg cgaggtagcg
      601 cgggtcggtg ccgccgtcga gcatacggca gaaccaatac agcgcggcgt tcggatgcga
      661 accgcgcacg gatttgtgca gggcggagat ttggttgtag aaactctcgc cgcctttgtc
      721 gaaacggcgg atttgcgccc cgagactgtc ggcgagaaat tcggcggtta agtttttcag
      781 acgacgtgta tcggcggcgc gtaaaagttg ttccaacaaa ttcaacaatc tgcgcgcatc
      841 accgtcggcg gtattcacga gtaatttttg cgcatccgtt tcaatcgtaa actcttggta
      901 ttcaggcaaa gccaatacct tggcaatcag ctttttcagg tcgtctgaag acaagggttg
      961 caaaacatac acctgagcgc ggctcaacag cgcgggattg acttcaaacg acggattttc
     1021 cgtcgtcgca ccaataaagg ttagcaaacc gctttcgaca tgcggcaaaa acgcgtcctg
     1081 ctgcgccttg ttgaagcggt ggacttcatc gacaaacaaa atcgtcgcgc gtccctgctg
     1141 caaagcgatt tcggctttat cgattgcctc gcggatgtcc ttcacgccgg aaaatacggc
     1201 ggaaacaggc aaaaactggg cgttgaaact ctgcgccaaa atccgcgcca acgtcgtctt
     1261 gcccacgccc ggcggccccc acagcaacat agaatgcggc ttgccgcctt ctaccgccac
     1321 gcgcaaaggt ttaccttcgc cgatgaggtg ttcctgcccc accacgtcgt caagcgtatg
     1381 cggacgcaat cgttcggcaa gcggcgcgtc gggttctcgg gcaaacaaat cggtcataac
     1441 ggctccgtca acaggttttc aaacaatatg attatacggc agggaacggc ggcgtgccgc
     1501 atacggattc cgcccctccg tttgccttaa gccgatatta ggcgcatact ggaaaagacg
     1561 agagacttca cacaatatat ccggcacgga gaccgattcc gcatcggcat gacaataccc
     1621 aaatcagcgt ttcaattaaa cattaaggag actaaaatag aaaatttgct ttatctacca
     1681 ttgctttgtt gattcaatcg gcattatgtt ttgaggcgga agcccatgaa tatactaata
     1741 ttcaagagat ggaatgggtg tctttatttt ctgatccgca aagagacgat gatagtctta
     1801 taacccttaa agatgaaaaa atcactgtaa aaaactatat tgtgccttgg tggaaaaaag
     1861 gtgaaaactt tagaaaatta gaacttatta ccactggtaa aaatgataat ggaaatttaa
     1921 cggtaaatgg aatttacggc atccaatctt ttgcagactc tcaattggga tatacgcctg
     1981 aattattggt aaaaagcaat aatgatattc tatttaaaaa taatctccaa tctgttgacg
     2041 tgaaacccca ttccggaaat atccatttgg atgccaaagg aaaaattcaa tttaatttga
     2101 atgttcccga tgttgatggg gtacaagatg tagccagtgg aaaaaaatac cgacaaacaa
     2161 tagtgcctta gtgcggtatg tcaacactat cagccccccg atgaaaatga caaaggcagc
     2221 atatcctttc attcaaaaac aggcaatttg ttcaatatga acgttaaagt tcataaagac
     2281 acacaccatt tcggtattca caacctcaac aataccgatg ttcatctgac tgccgaagac
     2341 agcgataatg tgattgagat taaaggggaa ctcgccgacc ttatgccgac aggaaatgtt
     2401 gagagtacaa gttttttaag gggcattgaa acggctttta aatccaatac cgtattaacg
     2461 gggaataaca ataaaatatc catcgccact gagggcaagg gcttgggatt gggcgtaaat
     2521 ggtctccagt ccaactcccc ctattccgga cgcacgacgg gcattttcat caataatcaa
     2581 tcaagcgacc ttacccaacc ttcccttgat ggcatcagca ctatcaagct caaagccgtc
     2641 aagggaaata atgaagttga tttaaatgta aaaaaccacg cctccgtaaa aggcattatc
     2701 gcgtcgcatt ctgcaaaagc aacgcttgaa gccgaagggg acaatattgt ctaggttaaa
     2761 aatccggaca ccaatacggc tttaatcgat gctttgaaaa aacaataccc caatgcttcg
     2821 aaagaactat acagggtggg ggttcaatcc acgactggaa cagtacgcat ttcgccaaac
     2881 ggcaaaatcg cattaacgga attgaaaact tttggaattg tacaaaacgg catttgcg
//
LOCUS       DAXHKG010000179         2754 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.179, whole genome shotgun sequence.
ACCESSION   DAXHKG010000179 DAXHKG010000000
VERSION     DAXHKG010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.179"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..534
                     /locus_tag="ACFMWP_001945"
     CDS             <1..534
                     /locus_tag="ACFMWP_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC5892483.1"
                     /translation="ATALQDSAFAVKDGINSAKQWADAHPNITATAQTALSVAEAAGT
                     VWGGKKVELNPTKWDWVKNTDYKTPAARPMQTLDGEMAGGNKPVVKSIRPTTRDELRQ
                     ALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPNGEVIRTQRVPRTDGVQGKYPQRQDY
                     EGNPLPNNHHHSGYFVK"
     gene            531..848
                     /locus_tag="ACFMWP_001946"
     CDS             531..848
                     /locus_tag="ACFMWP_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892484.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            918..1271
                     /gene="mafB"
                     /locus_tag="ACFMWP_001947"
                     /pseudo
     CDS             918..1271
                     /gene="mafB"
                     /locus_tag="ACFMWP_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            1257..1586
                     /locus_tag="ACFMWP_001948"
     CDS             1257..1586
                     /locus_tag="ACFMWP_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mAFB alternative"
                     /protein_id="HFC5892485.1"
                     /translation="MTSNSKADASTQPSLQAQLIGEQISSGHAYNKHVIRQQEFTDLN
                     INSPADFARHIENIVSHPTNMKELPRGRTAYWDDKTGTIVIRDKNSDDGGTAFRPTSG
                     KKYYDDL"
     gene            1596..1802
                     /locus_tag="ACFMWP_001949"
     CDS             1596..1802
                     /locus_tag="ACFMWP_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892486.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            1830..2185
                     /locus_tag="ACFMWP_001950"
                     /pseudo
     CDS             1830..2185
                     /locus_tag="ACFMWP_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2182..2553
                     /locus_tag="ACFMWP_001951"
     CDS             2182..2553
                     /locus_tag="ACFMWP_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC5892487.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            2639..2754
                     /locus_tag="ACFMWP_001952"
                     /pseudo
     CDS             2639..2754
                     /locus_tag="ACFMWP_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
BASE COUNT          971 a          481 c          571 g          731 t
ORIGIN      
        1 gcaaccgcat tacaagacag tgcttttgcg gtaaaagacg gtatcaactc tgccaaacaa
       61 tgggctgatg cccatccgaa tataacagca acagcccaaa ctgccctttc cgtagcagag
      121 gccgcaggta cggtttgggg cggtaaaaaa gtagaactta acccgactaa atgggattgg
      181 gttaaaaata ccgattataa aacacctgct gcccgaccta tgcagacttt agatggggaa
      241 atggctggtg gaaacaagcc agttgttaaa tctatcagac caactacgcg agatgaatta
      301 cgtcaagcat tgcaagaaca aggttttaga cgtactggtt cagatgcggc tcaatatgaa
      361 acatggaaag gtcctgatgg cgtgaaaata gatattcgtc caaatggaga ggttataaga
      421 acccaaagag tgccgcgaac cgatggtgta cagggaaaat atccgcaacg acaagattat
      481 gaaggcaatc cattgccaaa taatcatcat cattctggat attttgtcaa atgaaaaaaa
      541 atatttttca caatgtaagc ctttatgaaa taatcttttc cgataatgga aataccctta
      601 cattatcttt tacagataca attgaaggta attatttcgg atatatcaaa tgcagtaata
      661 ttttgaattt taaattagat acaaataatt tcgtagatta tgaggataag gaagatagct
      721 tgtttccctt gtttataccc gaaatagagc tatataaata ccaattttat agtgaaatta
      781 ttattgatgt agggattatt ataaaaatat ctgctgaaac aattaatttt gagccactgg
      841 gaaaatagta actgctttct cagcagccgt agcaactgta tttttacccg acggggtaaa
      901 aatacagttg ctacatctct gcgcagcaga ctctacaagg tattaataat ttaggaaatt
      961 taagtccaga aacacaactt gctgccgcga gcctattaca ggatagtgct tttgcggtaa
     1021 aagacggcat taattccgcc agacaatggg ctgatgccca tccgaatata actgcaacag
     1081 cccaaactgc ccttgccgta gcagaggccg caactacggt ttggggcggt aaaaaagtag
     1141 aacttaaccc gaccaaatgg gattgggtta aaaataccgg ctataaaaaa cctgctgccc
     1201 gccatatgca gactgtagat ggggagatgg caggggggaa tagaccgcct aaatctataa
     1261 cgtccaacag caaagcagat gcttccacac aaccgtcttt acaagcgcaa ctaattggag
     1321 aacaaattag tagtgggcat gcttataaca agcatgtcat aagacaacaa gaatttacgg
     1381 atttaaatat caattcacca gcagattttg ctcggcatat tgaaaatatt gttagccatc
     1441 caacaaatat gaaagagtta cctcgcggta gaactgcgta ttgggatgat aaaacaggga
     1501 caatagttat ccgagataaa aattctgacg atggaggtac agcatttaga ccaacatcag
     1561 gtaaaaaata ttatgatgat ttataggaaa aagccatgaa tatactatcc ataaataatc
     1621 aaaactcaac tatttcacta actcaagatg aagtttttgt tttacgagct atcttgaatg
     1681 agatatatgc gggcgtatgt gtagattcaa gagaatttga aaatgtatct ggtgttagaa
     1741 aacatgaagt agataattta caacaacagt ttgctggaat ttataaaaaa atgacaactt
     1801 aacaacccaa atttttgtca gagcctagtg caaattacaa ctatgattct attgtagccg
     1861 aaatgaaaga aaaaaatcat gggttggcga cagggttgat gttgttaata tgcctgatgg
     1921 agcacctact agtatggata acacgcgtat tatggcagca cgtgaagcag gggtaaaagt
     1981 ggaagcgaat gttcataatt ttaatgaccg attatcatca aaagagagaa tcaggtttaa
     2041 gcatgatggt attgagcctc aaacttgggg agaagctatc cagctacgaa ttagaaagca
     2101 agaaacacaa aaaggagttc cagaagggtg gagcaaaaga tttcctaacg gaagtattta
     2161 tgatgtaaag gtacttagga aatgataaaa caaaatagtt ttgttccgta tcctgaagca
     2221 atgcttccta aaggatttaa atatccgcaa agttatttaa aattagctca atccactcat
     2281 gccattaact acgatgaaca atattctttt ccttggtggt ttgaaaatgc agaaagcaat
     2341 atatcagaag taattgacat ttattttgaa ataactggca ttccaaacct attacctttt
     2401 gctagaaacc aagagtgggc tgcctgtttt gatatttcag ataaatcagg taatcctaaa
     2461 attatagtag ttaatttaga taatacaaaa tattacgaga cttttgaaaa ttttgatact
     2521 tggctaaaag aagctgaaaa tgatggttgg tagcagccgt aggtcggatt ctcgaatccg
     2581 acattttcca acagcggcat ttcggaaacg atagacgcgt caaatatttt tgtcggatac
     2641 aagtatccga ccatacggca atcatacggg taactctgcc ccatccgtag aggctgataa
     2701 cagtcatgag gggtatggat acagcgatga agtagtgcga caacatagac aagg
//
LOCUS       DAXHKG010000180         2668 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.180, whole genome shotgun sequence.
ACCESSION   DAXHKG010000180 DAXHKG010000000
VERSION     DAXHKG010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.180"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..986)
                     /locus_tag="ACFMWP_001953"
     CDS             complement(<1..986)
                     /locus_tag="ACFMWP_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892488.1"
                     /translation="MTSANFNINGFGDVKLTPYSPLLGYKAWDSFIGSIQSLSDLIYN
                     VDNNRNKMEITVNNAIQAADSFLSSIGRDNKITNTASLLASLDNIFLNLRNVSRDIRE
                     TGKFKPNDIQQAIGDIFIAAGDGLQYIKQQTEAMAQSKFLPTKLKTGLNDVLNSRMLK
                     SSTVLQHELNYLGFKIKDYGNERLGESIMNIDDFTPSKIANFFADPDTYSNVLEEVSR
                     FIYSLVPDDANPWKGGEDYIGRGISEWGELLEKWYKQDFLPYLEKEWDQFPKFEDWLP
                     EFPEWAREWLKLDPKRSGKYHVYDPLALDLDGDGIETVAAKGFAGALFDHRN"
     gene            complement(1845..2668)
                     /locus_tag="ACFMWP_001954"
                     /pseudo
     CDS             complement(1845..2668)
                     /locus_tag="ACFMWP_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          818 a          517 c          453 g          880 t
ORIGIN      
        1 tgattgcggt ggtcgaacaa tgcacctgca aagcctttgg cagcaacggt ttctataccg
       61 tcgccgtcta gatctagggc gagggggtcg tagacatgat atttgcctga acgtttggga
      121 tctaatttca accactctct tgcccattca gggaattcag gcagccaatc ttcaaatttc
      181 ggaaattggt cccattcttt ttcaagataa gggagaaaat cttgtttata ccatttttcc
      241 agtaactctc cccattcact tatccctcgt ccaatataat cttcgccccc tttccaaggg
      301 tttgcatcat caggaactaa ggaatatata aacctagata cttcttctaa tacattgctg
      361 tatgtatcag gatccgcaaa aaagtttgct atcttacttg gtgtaaaatc atctatattc
      421 attatagatt cgccaagcct ctcgtttcca taatccttta ttttaaatcc caaataattc
      481 aattcatgct gtaaaacagt agaggatttt agcattctag aattaaggac atcatttaaa
      541 ccagttttta atttagttgg taagaatttg ctttgagcca tcgcctctgt ttgttgtttt
      601 atatattgta atccatcacc agcagcaatg aatatatcac caattgcttg ttgaatatca
      661 ttaggtttaa attttcctgt ttctcgtata tctcgagata catttcttaa atttaaaaaa
      721 atgttatcga gggatgcaag taaagaagca gtatttgtta ttttgttatc tcttccaata
      781 ctgcttaaaa agctatctgc agcttggata gcattattaa cagtaatttc cattttattt
      841 ctattgttat ccacattata gattaaatca gataaggatt gaatagaacc aataaatgaa
      901 tcccaagctt tatatcccaa gagtggtgaa tagggtgtta atttcacatc tccaaaaccg
      961 ttaatattaa aatttgcaga tgtcatatct gctttccttt caagtaaatt aaaaaaataa
     1021 cgtgaggaat taaaattaag aataaattaa ttatcgactc aatataatat gaatcaatta
     1081 gctctcttat ggtaaatata agaggtaaaa atattaaaaa taaactaata aagttcagaa
     1141 aaatagtaaa tggaatattt tcatatggaa aaattctaca aaatacaagt aatattccat
     1201 gacatattag caaatgagta aaatttatta taaaatatat aaatatttcc ccatcgtaag
     1261 atatattcaa ataaagacat ataaacaata tgaagtatat aaaatatatt ttttggcatc
     1321 taaaaaataa acttttagca atcatatata aatagcttgt agaataaaaa acgaaaatta
     1381 ttaattatcg taggtgtgca tttattccaa cacggtttca tgcagcttaa aaaccaaaaa
     1441 ttctttctcc ctttatcctt tcttaaaaat agcgttttca aattctgcaa cgacaggttt
     1501 cattcaagta ggactgccgt gattgcatca attgcttcgc ggcatggcat ccatatcaca
     1561 caacaggaca tttattctcg ggtaagtcca ccttcatcct cttccgccag caggaacagt
     1621 tacaggctac ctaaaatatg ctctgtgctc ggatagtaaa tatttccttt ctcactattg
     1681 tttgtcattt aatcgacagt ctactctttc tctaaaattt cgtcaataat agttaaatac
     1741 ttttatttat tttaaataat gatatacatt tatggttatt tgtttagaca gcctaaaaca
     1801 aacggggaaa tcgtgttttc ccgaacatgg ctaatggata gcattttgtt cgtgaagcgg
     1861 ctgtgcagat tgtcggctgc taaaagtaaa tcccccattt ttgcggttgt accgtctgtt
     1921 ttggtatagc tgccttgctg agccaaagtg ttaccgttac cgagattttt atttacatct
     1981 ttataggcga gatccaaaga ttggataccc aattcttcaa gggtacgcaa ttcattagct
     2041 tgggaaatgc cgtcctggtt gagatcctgc catacacgca gggattggaa tgcggcgtct
     2101 gccgcgttga tgatgttgtc gccgtttgaa tccaattcgg ccaaagctgc atagccgtgt
     2161 ttggcaaaag aaccgtctgc cagtttggtg ttgtcgccga agagttccgc gccgttgtcg
     2221 atgatgccgt tgccgttcaa atcgcgcaca agcagaccgt catcggcagc aacccaaccg
     2281 gtggcggtgc ggataccgtt gttggtgtga tcaaataagc tgcctgcaaa gcctttggtg
     2341 gcaacggttt ctataccgtc tccgtccaaa tctagggcga gggggtcgta gacatgatat
     2401 ttgccattgc gttttttagt ttctttaacc caaggagcga aacattggtg accatcatcg
     2461 atccagcctt ccggatttgg gaacagatct ctaaattgct tgatgttatt attaacgatc
     2521 tcaaatattc cagtccactc tctttttgca acacttttat ataaatcatt gattatccca
     2581 ttaccccaac ctccaatttt ttgccaacca tctattgtat attcaacacc taactttgtt
     2641 agatccatca tcacagattg taaaaaag
//
LOCUS       DAXHKG010000181         2657 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.181, whole genome shotgun sequence.
ACCESSION   DAXHKG010000181 DAXHKG010000000
VERSION     DAXHKG010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.181"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            144..773
                     /locus_tag="ACFMWP_001955"
     CDS             144..773
                     /locus_tag="ACFMWP_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HFC5892489.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            929..2590
                     /locus_tag="ACFMWP_001956"
     CDS             929..2590
                     /locus_tag="ACFMWP_001956"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HFC5892490.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADSYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPTVHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGVVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVRLPQNADASQGWQTVWQGARPRNKDSKFALIRKIGENI"
BASE COUNT          525 a          664 c          687 g          781 t
ORIGIN      
        1 taaagaatcg ttctctttga gcgaaggcga ggcaacgccg tactggtttt tgttaatcca
       61 ctatattttg acggggttga agttgacatc tacaaggttt aatgtttgaa tacatttaaa
      121 aatatatttg aatgagatgt tttatgattc aaaatgtcgt tacttcaata atcctgtatt
      181 ctgggacagc cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagca
      241 gaaaagacat cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc
      301 taagtttgct ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc
      361 tcggcttgat tccgattttc ctaggcatca aagttttgct gttaggagat tctgatggag
      421 aggctattgc caaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta
      481 tgattacttt tgcaagttgt ggtgctgaca atattggtgt ctttgtccca tattttacta
      541 ccttaaattt agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct
      601 tggttttttc tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat
      661 atagcagatg gtttgttgct gttgtttatt tgggattggg ggtatatatc ctgattgaaa
      721 acaacagttt tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat
      781 agtatctgca aagactgcca tgtgcagtct tttttgttgc cggtcttttt gtgtctgatg
      841 ctgtctgatt ttatctgatg ccgtctctgc acgacctttg tgcgaatatt tgctacactt
      901 ggcaatccgt ccatttcttc tcacacttat gctgacctat actccgcccg atgcccgccc
      961 gcccgccaaa acccacgaaa aaccgtggct gctgctgttg atggcgtttg cctggttgtg
     1021 gccgggtgta ttttcacatg atttgtggaa tcctgccgaa cctgccgtct ataccgccgt
     1081 cgaagcactg gcaggcagcc ccaccccctt ggttgcccat ctgttcggtc aaaccgattt
     1141 cggcataccg cccgtgtatc tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg
     1201 ggctgccgac tcatacgatg ccgcacgctt tgcaggcgtg tttttcgccg ttgtcggact
     1261 gacttcctgc ggctttgccg gtttcaactt tttgggcaga caccacgggc gcagcgttgt
     1321 tttaatcctt atcggctgta tcgggctgat tccgaccgta cactttctca atcccgctgc
     1381 cgccgccttt gccgccgccg gactggtgct gcacggttat tctttggctc gccggcgcgt
     1441 gattgccgcc tcttttctgc tcggtacggg ctggacgctg atgtcgttgg cagcagctta
     1501 tccggcagca tttgccctga tgctgccctt gcccgtactg atgtttttcc gtccgtggca
     1561 aagcaggcgt ttgatgttga cggcagtcgc ctcacttgcc tttgccctgc cgcttatgac
     1621 cgtttacccg ctgctcttgg caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacga
     1681 tcacgttttc ggtacgttcg gcggcgtgcg gcacgttcag acggcattca gtttgtttta
     1741 ctatctgaaa aacctgcttt ggtttgcact gcccgcgctg ccgctggcgg tttggacggt
     1801 ttgccgcacg cgcctgtttt cgaccgactg ggggattttg ggcgtcgtct ggatgcttgc
     1861 cgttttggtg ctgcttgccg tcaatccgca gcgttttcag gataacctcg tctggctgct
     1921 tccgccgctt gccctgttcg gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc
     1981 gtttgtcaac tggttcggca ttatggcgtt cggactgttt gccgtgttcc tgtggacggg
     2041 ctttttcgcc atgaattacg gctggcccgc caagcttgcc gaacgcgccg cctacttcag
     2101 cccgtattac gttcccgaca tcgatcccat tccgatggcg gttgccgtac tgttcacacc
     2161 cttgtggctg tgggcgatta cccgcaaaaa catacgcggc aggcaggcgg ttaccaactg
     2221 ggcggcaggc gttaccctga cctgggcttt gctgatgacg ctgttcctgc cgtggctgga
     2281 cgcggcgaaa agccacgcgc cggtcgtccg gagtatggag gcatcgcttt ccccggaatt
     2341 aaaacgggag ctttcagacg gcatcgagtg tatcgacata ggcggcggcg acctgcacac
     2401 gcggattgtt tggacgcagt acggcacatt gccgcaccgc gtcggcgatg tacaatgccg
     2461 ctaccgtatc gtccgcttgc cccaaaatgc ggatgcgtcg caaggctggc agacggtttg
     2521 gcagggtgcg cgcccgcgca acaaagacag taagttcgca ctgatacgga aaatcgggga
     2581 aaatatataa aaaacaacag attgagccga atttctggat taagtgccgg aaatcgcgta
     2641 taattgcgcg attaaac
//
LOCUS       DAXHKG010000182         2603 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.182, whole genome shotgun sequence.
ACCESSION   DAXHKG010000182 DAXHKG010000000
VERSION     DAXHKG010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.182"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(26..292)
                     /locus_tag="ACFMWP_001957"
     CDS             complement(26..292)
                     /locus_tag="ACFMWP_001957"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892491.1"
                     /translation="MPSEAFRQQAARSTPCGFFLRISAAKAQTLKLPTPFFAFLFFDT
                     RAFVLFPAIPKTKSGRNLSEKQQPFRRHSRAGGNLGLSVRKRIG"
     gene            complement(296..1930)
                     /gene="groL"
                     /locus_tag="ACFMWP_001958"
     CDS             complement(296..1930)
                     /gene="groL"
                     /locus_tag="ACFMWP_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HFC5892492.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGMGGMM"
     gene            complement(2023..2313)
                     /locus_tag="ACFMWP_001959"
     CDS             complement(2023..2313)
                     /locus_tag="ACFMWP_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HFC5892493.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
     gene            2526..>2603
                     /locus_tag="ACFMWP_001960"
     CDS             2526..>2603
                     /locus_tag="ACFMWP_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892494.1"
                     /translation="MLPSKYEDNALQIKEKSTERTAPFFC"
BASE COUNT          548 a          682 c          672 g          701 t
ORIGIN      
        1 gaacgtaaaa tctgaagaaa ccgttttatc cgatacgttt ccgcaccgac agacctagat
       61 tcccgcctgc gcgggaatga cggcggaaag gttgctgttt ttccgataaa ttcctgccgc
      121 tcttcgtttt tggaatggcg ggaaataaaa caaaagcgcg cgtatcaaaa aacaaaaatg
      181 caaagaacgg cgttggcaat tttaaggttt gcgccttagc cgcacttatt cgcaaaaaaa
      241 aaccgcacgg cgttgaccgt gcggcttgtt gtctgaaggc ttcagacggc attgcttaca
      301 tcatgccgcc cataccaccc atgccgccca tatcaggcac agccggtttg tcttcgggga
      361 tttcagcgat catgcaatca gtggtcagca tcaagccggc gatagatgcg gcgtgttgca
      421 gcgcggaacg ggttactttg gcggggtcga gtacgcccat ttcgatcatg tcgccgtatt
      481 cgccgctgcc agcgttgtaa ccgtagttgc ctttgccttc caatactttg ttcacaacca
      541 cgctgggttc gccgcctgcg ttggcaacga tttggcgcag cggagactca acggcgcgca
      601 agacgatttg tacgcctgcg tcttggtcgg cattgccggt gtgcaggttt tccaaagcag
      661 cacgggcacg caacagggct acgccgccgc ctgcaaccac gccttcttca acggctgcgc
      721 gggtagcgtg cagcgcgtct tccacgcggt cttttttctc tttcatttcg acttcggtcg
      781 cggcaccgac tttgatgact gccacgccgc ctgccaattt agccacgcgc tcttgcagtt
      841 tttctttgtc gtaatcgctg gttgcggttt cgatttgttg gcggatttcg gcaacacgcg
      901 cttcgatttg ggctgcgtcg ccaaagccgt cgatgatggt ggtgttttct ttaccgattt
      961 cgatgcgttt ggcttgaccc aagtcgtcca aagtcgcttt ttccaaagac agaccgactt
     1021 cttcggaaat caccacgccg ccggtcagga tggcgatgtc ttgcaacatc gctttgcggc
     1081 ggtcgccgaa gccaggggct ttgacggcaa cggttttcag gatgcctcgg atgttgttca
     1141 cgaccaaagt cgccaaggct tcgccttcta cgtcttcagc gataatcaac agcggacggc
     1201 tggctttcgc cacttgttcc aaaacaggca gcaagtcgcg gatgttgctg atttttttgt
     1261 cgaacaacaa tacaaacgga ttgtccaaag cagcgatttg tttttcagcg tcgttgatga
     1321 agtaaggaga caagtagccg cggtcgaact gcataccttc aaccacgtcc agctcgtttt
     1381 ccaaagattt gccgtcttca acggtaatca cgccttcttt gccgactttt tccatcgctt
     1441 cggcgataat cgcgccgact tgttcgtcag agttggcgga aatcgagccg acttgggcga
     1501 tttctttgga agtgtcgcaa ggtttggcga tgttttttag ctcttcaacc aaagcggcaa
     1561 cggctttgtc gataccgcgt ttcaggtcgg tcgggttcat accggcggta acgtatttca
     1621 taccttcggc aacgatggat tgcgccaata cggtggcggt agtcgtaccg tcgcctgcca
     1681 cgtcgttggt tttggacgcg acttctttca ccatttgcgc gcccatattt tcaaacttgt
     1741 ctttcagttc gatttctttg gcgacggtta cgccgtcttt ggtgatgtgc gggccgccga
     1801 aagcgcggtc aacgactacg ttgcggcctt tggggcccaa ggttacgcgc acggcgtttg
     1861 ccaaaatgtt cacgccgttt accatttttt ggcggacttc attgccgaac tgtacgtctt
     1921 ttgctgccat ttcaattctc caaaaatcat taaaactgtc tgataaaacc gtttatgccg
     1981 tctgaaggcg gtttgccgtt tcagacggca tcgtgtccgt atttattttt caacgatgcc
     2041 gaaaatatct tcttcacgca ttaccaacag ctcttcgccg tcggctttga cggtttggcc
     2101 gctgtatttg ccgaaaatga ttttgtcgcc gactttgaca tccagcggac ggcgcgcgcc
     2161 gtctttgccg attttgcccg cgcccacggc gatgacttcg cccatatcgg gtttttcggc
     2221 ggccgcaccc ggcaaaacga tgcccgatgc ggttttctct tcagcttcca agcgtttgac
     2281 gacaacgcgg tcgtgtaaag gacggatggt catatttatg ctccgataaa atgatttgaa
     2341 aacaatcatc tgcccgaacg gttcggacag attgaagtgg aaaccgggct gccgcctgcc
     2401 ggcccgcccg tataagtcgg caaaattagg gtgtgtgcgg gcaaattcaa gtgaggcgga
     2461 aaaaatttat ttccgccgtt ttttatagtg gactaaattt aaggggctgt actagattag
     2521 cagatatgtt accctcgaaa tatgaagata acgcactgca aattaaagaa aaaagtacag
     2581 aaagaactgc tccgtttttt tgt
//
LOCUS       DAXHKG010000183         2504 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.183, whole genome shotgun sequence.
ACCESSION   DAXHKG010000183 DAXHKG010000000
VERSION     DAXHKG010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.183"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            168..791
                     /gene="lolA"
                     /locus_tag="ACFMWP_001961"
     CDS             168..791
                     /gene="lolA"
                     /locus_tag="ACFMWP_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HFC5892495.1"
                     /translation="MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTKPYRQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1064..2203
                     /locus_tag="ACFMWP_001962"
     CDS             1064..2203
                     /locus_tag="ACFMWP_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC5892496.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEQETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLSVKLWQGLKAGK"
     gene            2337..>2504
                     /locus_tag="ACFMWP_001963"
     CDS             2337..>2504
                     /locus_tag="ACFMWP_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC5892497.1"
                     /translation="MNLSIVVPIYNVESYLEACLSSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKI"
BASE COUNT          683 a          731 c          619 g          471 t
ORIGIN      
        1 gcggcacaca ttaaagggca gcgtggcgcg cctgcctttt ccggtgggca aaaaatcggc
       61 cctcggaaaa cgctgtttgt aaaatgcaaa ccgcccgtaa cgccgcccgt atgattgttt
      121 tgccgcgccg atactttacg ccacactcat cccgacaagg aaaaataatg atgaaaccgc
      181 acaacctgtt ccaattcctc gccgtttgct ccctgaccgt cgccgtcgct tccgcacagg
      241 cgggcgcggt agacgcgctt aagcaattca acaacgatgc cgacggtatc agcggcagct
      301 tcacccaaac cgtccaaagc aaaaagaaaa cacaaaccgc gcacggcacg ttcaaaatcc
      361 tgcgaccggg ccttttcaaa tgggaataca ccaaacctta caggcaaacc atcgtcggcg
      421 acggtcaaac cgtttggctc tacgatgttg atctggcaca agtgaccaag tcgtcccaag
      481 accaggccat aggcggcagc cccgccgcca tcctgtcgaa caaaaccgcc ctcgaaagca
      541 gctacacgct gaaagaggac ggttcgtcca acggcatcga ttatgtgctg gcaacgccca
      601 aacgcaacaa cgccggctac caatacatcc gcatcggctt caaaggcggc aacctcgccg
      661 ccatgcagct taaagacagc ttcggcaacc aaacctccat cagtttcggc ggtttgaata
      721 ccaatcccca actctcgcgc ggcgcgttca agtttacccc gcccaaaggc gtggacgtgt
      781 tgagcaactg atgccgtccg ccccgatgcc gtctgaaagc cgccgaggct tcagacggca
      841 ttttcacgca ggcggaacaa tgtcccgcat taccgcccga tcgggcatcg gaacggcaaa
      901 cccgtgaaaa ttaacggttg cgccccggtt gtttttgccg tttaatgcaa accttgctgc
      961 atcaagggcc aagaaagccg accggccgcc cccacagctt ccgatgcagg cggccaggcc
     1021 gtccctgcaa tgttttttat ttttgaacga aaggtcgaaa accatgaaaa aaacactggt
     1081 ggcggcggca atcctgagcc tcgccttgac tgcgtgcggc ggcggaagcg ataccgccgc
     1141 ccaaaccccc tccgccaagc ccgaagccga acaatcgggc aaactcaata tctacaactg
     1201 gtcggattat gtcgatcccg aaaccgtcgc cgcctttgaa caagaaaccg gcatcaagac
     1261 gcgttccgat tattacgaca gcaacgaaac actggaggca aaagtcctga ccggcaaatc
     1321 cggctacgac ctgaccgcgc cgtccatcgc caacgtcggc cggcaaatca aagcgggcgc
     1381 gtatcagaaa atcgacaagg cgcaaatccc ccattacggc aacatcgata aagatttgct
     1441 gaaaatgatg gaagccgtcg atccgggcaa cgaatacgcc gtcccctatt tctggggcat
     1501 caacaccttg gcaatcaaca cgcggcaggt gcaaaaggca ttgggtacgg acaagctgcc
     1561 cgaaaacgaa tgggatttgg tgttcaaccc cgaatacacc gccaaactca aatcctgcgg
     1621 catcagctat ttcgacagcg caatcgaaca gattcccttg gcgttgcact atttgggcaa
     1681 agaccccaac agtgaaaatc ccgaagacat caaagccgcc gtcgatatga tgaaagccgt
     1741 ccgaggcgac gtgaaacgct tcagctcttc cggctatatc gacgatatgg cggcgggcaa
     1801 cctgtgtgcc gccatcggtt acggcggcga tttgaacatt gccaaaaccc gtgccgaaga
     1861 agccgcaaac ggcgtggaaa tcaaagtatt gaccccgaaa accggcgtgg gcgtgtgggt
     1921 ggattccttt atgattccgc gcgacgcgca aaacgtcgcc aacgcccacc gctatatcga
     1981 ctacacgctc cggcccgagg tggcggcgaa aaacggcagc ttcgttacct acgcgcccgc
     2041 cagccgtccc gcgcgcgagc tgatggatga aaaatacacc tccgacgcat cgattttccc
     2101 gaacaaagaa ctgatggaaa aaagtttcat cgtatcgccc aaatccgcag aatccgccaa
     2161 actgagcgtg aagctgtggc aagggctcaa ggccggaaaa taaccgcaac ccctgccgtc
     2221 tgaaaccttt cgggcggcag gaaacggcgc gtccgttatc aaacaggggg ggcgtttccc
     2281 ctcctgccgg ttatgattgg gttaagatta aaatgattta gtaaaatgag aaagatatga
     2341 atttaagtat cgtagttccc atttataatg tcgaaagtta tttggaagcg tgtttaagtt
     2401 ccatagaacc tatattaagt aatgaaaatg tcgaacttat ccttgtgaat gacgggtcaa
     2461 aagacggaag tgaagatata tgttataaat atatagataa aata
//
LOCUS       DAXHKG010000184         2504 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.184, whole genome shotgun sequence.
ACCESSION   DAXHKG010000184 DAXHKG010000000
VERSION     DAXHKG010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.184"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(13..819)
                     /locus_tag="ACFMWP_001964"
     CDS             complement(13..819)
                     /locus_tag="ACFMWP_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HFC5892498.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1039..2409
                     /gene="ffh"
                     /locus_tag="ACFMWP_001965"
     CDS             1039..2409
                     /gene="ffh"
                     /locus_tag="ACFMWP_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HFC5892499.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          693 a          630 c          652 g          529 t
ORIGIN      
        1 tgttggctct tcttatcttt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcataagg ctgacaaatc cgatgatggt ccacacggcg gcttttttac cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcgaaga atgtgccgct
      241 gacgacggaa taggtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagctcctgc ggtgcaggct
      361 ccgattcagc agcagggtca aaacggacaa taatgttgcg atgccgaaca gcccgtatgc
      421 aagcagcgaa gttccgatat gcagcataaa gggaaggtcg gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcggat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccgaagcc cataatgatg attttgtctt gaatgaccgg
      661 cataagcagt gccgcgccgt ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccggccgc gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctatctata
      841 ctgttgcgcc gtctgcggcc gcttatgaaa tattggaact tttaacgttg gaattgtaaa
      901 atccccgttt cgggcaagcc ttgacggatt tgccgatatg ctgtccggca cacaagccgc
      961 atcaaattat tttgatttta ttttaacaaa gaatgcccct gatggggcaa gctattctta
     1021 ttcagaccaa ggaccagtat gttagacaat ttaaccggcc gcttcagcaa tgtcttcaaa
     1081 aacatccggg ggcaggccaa actgaccgaa gacaatatta aagaggcctt gcgcgaagtc
     1141 cgcctcgccc tgcttgaggc ggatgtcgcc ctgcctgtcg tcaaagagtt cgtcaacaac
     1201 gtcaaagaaa aggccctcgg tcaggaagtg gctggcagcc tgacgccgga tcaggcattt
     1261 atcggcgtgg tcaacaaagc cctgaccgaa ctgatgggca gggaaaacaa aacgctggat
     1321 ttgtcggttg cgccgcccgc cgtcgtgttg atggcaggtt tgcagggcgc gggcaagacg
     1381 acgaccgccg gcaaactcgc ccgcctgctg aaaaacgatc agaagaaaaa ggttttggtc
     1441 gtatctgccg acgtttaccg ccctgccgcg attgaacaac tgcgcctgtt ggccgaacag
     1501 gtcggcgtgg actttttccc atccgatacc aaccaaaaac cggttgaaat tgcaactgcc
     1561 gccgtcgatt acgccaaaaa acatttttac gatgttttga tggtcgatac cgccggccgt
     1621 ctggcaatcg atgaagagat gatgaacgaa atcaaagccc ttcacgcggc ggttaacccg
     1681 gtggaaactt tgttcgtcat cgatgcgatg ctgggtcagg atgcggtgaa cactgctcag
     1741 gcatttaatg aagccctgcc gctgaccgga gtcgtattga ccaagatgga cggcgactcg
     1801 cgcggcggtg cggcattgtc cgtacgccat gtaaccggca aaccgattaa atttatcggt
     1861 gtcggcgaaa aaatcaacgg cctcgaacct ttccaccccg accgtcttgc cagccgtatc
     1921 ctcggcatgg gcgacgtatt gaccctgatt gaagacgttc aaaaaggtat tgatgaagaa
     1981 gccgccgcca aaatggcgaa aaagctgcaa aaaggcaaag gcttcgacct caacgacttt
     2041 aaagaacaaa tccagcaaat gcgcaatatg ggcggtttgg aaaacctgat gtcgaaaatg
     2101 ccgggcgaac tgggtcaaat atcgaaacaa atccccgaag gtacggctga aaaagcgatg
     2161 ggtaaagtag aagccatcat caactcgatg acccctaaag aacgcgccaa ccctgccctg
     2221 ctcaaagcca gccgcaaacg ccgtattgca atgggtgcgg gcacgaccgt acaggaagtg
     2281 aacaaattgc tcaaacagtt tgaacaaatg caacaaatga tgaagatgtt cagcggcaac
     2341 ggcttgggca aactgatgcg tatggcgaaa ggaatgaagg gaatgaaagg aatgttcccg
     2401 ggtttgtaag ccgatttgac cgaaaacgcc gtctaaaatt tcagacggcg tttttgtttt
     2461 atattctgat ttatagtgga ttaacaaaaa tcaggacaag gcgg
//
LOCUS       DAXHKG010000185         2440 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.185, whole genome shotgun sequence.
ACCESSION   DAXHKG010000185 DAXHKG010000000
VERSION     DAXHKG010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.185"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(425..2305)
                     /locus_tag="ACFMWP_001966"
     CDS             complement(425..2305)
                     /locus_tag="ACFMWP_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HFC5892500.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFSAEAIAEEYFGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKISAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAVKPGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSE
                     FNTGEPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAIAL
                     QKARGKYEPDRAPQYDYSIELDEEGNVSIVRRERGSPIDTLVSEMMILANSTWAQMLD
                     ENDLPGLFRVQPAGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLFQQSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          497 a          589 c          722 g          632 t
ORIGIN      
        1 atttccacct gcgcgggaat gacgattcag aagttgcccg aaacctaaaa aactgaaacc
       61 gaacgagccg gatttccgct ttcgcgggaa tgacggcgta taagttcccg tgcggacaga
      121 cctatattcc cacctgcgcg ggaatgacga ttcagaagtt acacgaaact caaaaaaaac
      181 gaaaccgaac gaaccggatt cccgctttta cgggaatgac ggcgcataag ttcccgtgcg
      241 gacagaccta gattcccacc tgcgtgggaa tgacgggatt ttagattgcg ggtatttatc
      301 gggaacggcg gcttggaagt tcattgaaac ggaaaaacaa cggaaaccca aaaaaccgga
      361 ttcccgactg tgggaatgat gagattcagg tttctgtttt tgccggagtt tgccgtatcg
      421 ggcttcagac ggcattgcct gccgttgtac ccgcgggtgc gactgccttg atgtagttga
      481 gcgagacaaa ctgcttctcg gcatccaatt cggtgatttt gaacaatgcc tgtgatttgg
      541 gcagcgcgtc aaacggaata ccggtcgcgc gcgttaccag cggcaggcct tcaatgcgga
      601 cgaggtcttc tttgaggatg gtggccgtca gctcgctcgt gccttgctgt tgcagataga
      661 cgaggctcca gtaggcttcc atttggcgtt ggaagtcggc gtaggctgta taggcggcat
      721 caaagtcgcg cagcgcggcg aagagttcgg catcgctttg ttggaaaagc ggctcggcgg
      781 tgtcgtctat caggctgatc agttgctttt ggttgatgta gtcggcggcg cggcgcagcg
      841 gcgaggtaaa ccagccgtaa tgctgcacgc ccattccgat gtgcggctcg gatttggtgc
      901 tcatacgcac tttgcctgcc ggttgcacgc ggaaaaggcc gggcaggtcg ttttcatcca
      961 acatttgcgc ccaagtgctg ttggcaagaa tcatcatctc gctgaccagc gtatcgatgg
     1021 gagaaccgcg ttcgcggcgg acgatggata cgttgccttc ctcatccaat tcgatgctgt
     1081 aatcgtattg cggcgcacgg tcgggctcgt atttgccgcg tgctttttgc agggcgatgg
     1141 cgaattgata gaaccaaatc aggtcttgat ggtgggcgaa catcatttcg cccgcttcgt
     1201 ccaagcccgc ttcggcgttg aaatgcggtt cgatggcttg gatacgcagg ttttcggaga
     1261 tgttgaccgc ttcgattttg caggtcggtt cgccggtgtt gaactcgctg tccacatcga
     1321 aataaatgct gacggcaggg cggtgtgcgc ctgcatcaag gctgaacgcg gcaatccagt
     1381 tttcgggcag catcgtgatt ttgccgccgg ggaaataaac cgtgctcaag cgttccatga
     1441 tgtttttttc cattttgtcg cccggtttaa cggcaagtga cggcgcggcg atgtggatgc
     1501 cgacacgctt cgtgccgttg tccaagtcgg tcaggcttaa agcgtcgtcc acttcggtgg
     1561 tcgattcgtc gtcaatggaa aaggcggtaa cgtcggcctt gggcaggtcg ggcatttcgg
     1621 gaagggcaag gtcggggaag cctgtgcctt taggaaagta tttgatttca aacccgtctt
     1681 gcaggtattg cggaatggac gtaatgccac ccgttttttt cgccaattcg taggcggaga
     1741 ttttcagtgc gtcggcggct ttggtaaagg ctttgtaggt cagcgactgt ttgtcgggcg
     1801 cgtgcaggat ggttttcaaa tccgccgcga tttcagacgg catctcgccc cgttttaagg
     1861 cttccgccca agcgtcgatt tgcgcgtctt gctgtttttt gcgttcgatg gcggcaagcg
     1921 cttgtttcaa agtttcttcg ggcgcggctt tgaacacgcc tttggctttt ttgtagaaat
     1981 acatcggcgc ggcgtaaagc gcaatcaagg tcgccgccag ctcggttttg gtcggcgcat
     2041 gaccgaaata ttcttcggcg atggcttcgg cggaaaattc ttcttcgccg catacttccc
     2101 acaataaatc ggtgtcgatg tccgccgcct gtgcctgcgc gttttccaaa aacgccgcca
     2161 tatcgccgtc aaactcggca aagacattgt ttgccttcac tttggtgcgc ttgccgtgtt
     2221 gggtatcgac ttggtaggta gcgtcgtttt tttggatgat ggcggcgatt ttgaattggc
     2281 cggactcttc gtaaaaaata ttcatttttc ggatttttct gtggaaactc aagcgggcga
     2341 ttttagcaga ttaccgaaaa tgccgtctga aaaaaggttg ggagagggtt ggcgcgtctt
     2401 tgcggtgctt gcgttatagt ggattaacaa aaaccagtac
//
LOCUS       DAXHKG010000186         2436 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.186, whole genome shotgun sequence.
ACCESSION   DAXHKG010000186 DAXHKG010000000
VERSION     DAXHKG010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.186"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(90..641)
                     /locus_tag="ACFMWP_001967"
     CDS             complement(90..641)
                     /locus_tag="ACFMWP_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892501.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDLEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFQ
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
     gene            complement(695..1366)
                     /locus_tag="ACFMWP_001968"
                     /pseudo
     CDS             complement(695..1366)
                     /locus_tag="ACFMWP_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1433..1732
                     /locus_tag="ACFMWP_001969"
     CDS             1433..1732
                     /locus_tag="ACFMWP_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892502.1"
                     /translation="MKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGFNGDI
                     GEKLHRCAVMEWAENETETFAKFLSLPTAETQTQVFSCFQLFSPQIPPNFTQIPP"
     gene            complement(1774..>2436)
                     /locus_tag="ACFMWP_001970"
     CDS             complement(1774..>2436)
                     /locus_tag="ACFMWP_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC5892503.1"
                     /translation="TLSELLELINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQAI
                     EVDEEGQVGGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHEC
                     KHLPPLLEGIAEGTTVYADKGYDSAENRQHLEEHQLQDGIMRKACRNRPLSETQTKRN
                     RYLSKTHYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPA
                     AA"
BASE COUNT          635 a          666 c          511 g          624 t
ORIGIN      
        1 aaagaaaccg ccattagcac tacacccccc caagctgcgg ctgccaaaca catcggctgc
       61 ttctcgacgc acccgctgaa aaatgcgtcc tatccgtccg ccttgcccgc accccctgac
      121 tttgccgccc tgcccgatgc cgtctgaagc ctgaaccgcc ccaccagccc gatgacgcac
      181 gacaccgccg gaaagggcat acacaaagcc gtcagcacat aacgcgcatt ccccgtattg
      241 accacgtccg cgcccttcag cagcagcggt agcgcgttcg cccactccca caccgacggc
      301 gcgctgaacg ccaataccgc caccagcccc aacatctgga acaccccgat ttccaacacc
      361 tgccgccgcc gcaccgaacg gttgagcaaa aacacaaccg ccaacccgaa acagaccacc
      421 gccgccatac cgccgttggc gacaatctgc aaactgttga atgcaatatc gggcgtaacc
      481 gccaacacgc cttccaaatc cggcacggca cgctgcaaat ccaaaccctg caacacattc
      541 aacacaaaac cgtagatcaa atcaaaaaac accacgccta tcggcaaagc actcaaaacc
      601 cgccacatct tcctgtccga ccaaccgttc aaaactttca ttttacccga ccacgcaagc
      661 cgccgaacaa aaaataaggg gctgtcctag ataactagga caaacttgat tttactaatt
      721 gttttaaaat ggaacaagaa cttttatctc actgttgtta aaacgtcgtt cgcactcctt
      781 taaatacagc tcaaaatgcg ctttgggaat gccgttaaac ttgcgtaaat gacgttttgc
      841 ctggttccaa aagttctcaa ttccattaat atggttttgt cgttcagcaa aatgtgtgct
      901 gtgattgata cgaaaacgaa gtttcagcga agctaaaatg gctaaattcg cgcacatcta
      961 atacatcata gctacgataa caatccgtat aaacaatact gtcaggtttc acttgttcac
     1021 ggataatagg aaataaagta gcggtttgag tattcggtac tgtaaccgta taaaccttac
     1081 catttcgctt caaaagaccg aatacggcga ctttaccggc agcaccgcga ccgcgtttgc
     1141 ctttgcgttg tccgccaaaa taactttcat ctgcttctac ttcgccatca aacatttcca
     1201 aatgcggact gttttgataa ataagtaatc gtaaacgatg aaaataatag gctgcggtat
     1261 ttttattaac gcctactaac tctgctgccg ttcttgcagt tacacctgtg acaaacagtt
     1321 caatgagttt attttgttta tactggctta gacgactttt tctcataggg ataattctaa
     1381 cttaatttga atttccctag ttatctagga cagcccctta aaaaatatcc ctttgaaaga
     1441 ttttgatgaa gtttgtgaaa agtgggagaa atcctttaaa gaaaatggaa aagaaattga
     1501 atataatcaa aaatattcaa gaatttatgg tgaagttcgt ggagctggct ttaatggcga
     1561 tatcggagaa aagctacatc gttgtgccgt gatggaatgg gctgaaaatg agaccgagac
     1621 ctttgcaaaa ttcctttccc tcccgacagc cgaaacccaa acacaggttt tcagctgttt
     1681 tcagctgttt tcgccccaaa tacctcctaa ttttacccaa ataccccctt aatcctcccc
     1741 ggacacctga taatcaggca tccgtgctgc cttttaggcg gcagcgggcg cacttagcct
     1801 gttggcggct ttcaacaggt tcaaacacat cgccttcagg tggctttgcg cactcacttt
     1861 aatcagcccg aaataggctg cccgcgcata gcggaattta cggtgcagcg taccgaagct
     1921 ttgttcgacc acataatggg tcttcgacaa ataccggttg cgtttggttt gcgtttccga
     1981 cagcggacgg ttgcggcagg ctttgcgcat aatgccgtcc tgcaactgat gttcttccag
     2041 atgttgccgg ttttccgcac tgtcatagcc tttgtcggca tagacggtcg taccttcagc
     2101 tatcccttct aacaacggcg gcaggtgttt gcactcatgg gcattggcgg gggtgatgtg
     2161 cagtttctcg atatagcctt ccgcatcggt gcgggtatgt tgtttgtaac cgagtttgta
     2221 gaggccgttt ttctttatcc aacgggcatc gctgtcctta ctcggtgtgg tttggccgcc
     2281 gacttgtcct tcttcatcga cttctatggc ctgacgctgt ttgctgccgg cggtctgaat
     2341 aatggtggca tcaacgacag cggcggatgc tttctctact tttaaacctt tttcggtcag
     2401 ttggcggtta atcagttcca gcaattcgga cagggt
//
LOCUS       DAXHKG010000187         2431 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.187, whole genome shotgun sequence.
ACCESSION   DAXHKG010000187 DAXHKG010000000
VERSION     DAXHKG010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.187"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(103..690)
                     /locus_tag="ACFMWP_001971"
     CDS             complement(103..690)
                     /locus_tag="ACFMWP_001971"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HFC5892504.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPVGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWNEVAKRFAALS"
     gene            853..2259
                     /gene="dnaB"
                     /locus_tag="ACFMWP_001972"
     CDS             853..2259
                     /gene="dnaB"
                     /locus_tag="ACFMWP_001972"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HFC5892505.1"
                     /translation="MNDYTAMPSEDREIGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVSTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          620 a          612 c          645 g          554 t
ORIGIN      
        1 aagtgggaat ctagaaataa aaagcagcag gaatttatcg gaaataactg aaattcaata
       61 ccgcaaaaat ctacccgaaa tgatatagcg gattaacaaa aatcaggaca aggcggcgaa
      121 gcgtttggcg acttcgttcc agttgacgat ttcccaaaaa cctttcaggt agttggggcg
      181 gctgttgcgg tagtcgatgt agtaggcgtg ttcccacacg tcgcaggtca gcagcggcgt
      241 gttttcagtg gtcagcggcg tagcggcgtt ggaagtggaa accaaatcca atccgccggc
      301 aggggttttt accagccacg cccaaccgga gccgaaagta ccggcagcgc aggcattgaa
      361 cgcttcttgg aatttctcga agctgcccca tttcgcgtcg atggcggcgg ccagttcgcc
      421 gacaggtttg ccttgacctt tgggcgtgaa acccagccag tagaaggtgt ggttccaagt
      481 ttgtgccgcg ttgttgaaca cgccgcccga agattttttc acaatctctt ccaaaggcag
      541 gttttcaaat tcggtgcctt tgatttgatt gttcaggttg gtgatgtagg tttgatggtg
      601 tttgccgtag tggaattcca aagtctcttt gctcagatgc ggggacaatg cgtccagttc
      661 ataaggcagt tgcggcagct tatgttccat tttgtgctcc taatattgtt ttaaatgttg
      721 tattttggca gtgttgctgc aaatagctca gcagcgcaca tattttacct gttttgaggg
      781 atggaaacca attaaacctg ctttacgcta taatagaaga ttgcaatttc ggcacgacag
      841 ataggatgta ccatgaacga ttacacagcc atgccgtctg aagaccgtga gatcggcgca
      901 ttgtcgctgc ctccacattc gatggaggcg gaacaatccg ttttgggcgg gttgatgctg
      961 gaaaatccgg cttgggacag gattgccgat gtggtttcgg gagaggactt ctaccgccac
     1021 gaacaccgcc tgattttccg atccattgcc aaattaatca atgagagccg tcccgccgat
     1081 gtgattacgg ttcaggaaga tttgcagcgg aacgaagaat tggaagcggc aggcggattc
     1141 gaatatctga ttacgctggc gcaaaacacc ccgtctgccg ccaacatccg ccgctacgcc
     1201 gaaatcgtgc gcgagcgttc cattatgcgc caactcgccg aagtggggac ggaaatcgcc
     1261 cgcagcgcct acaatccgca aggcagggac gcggggcagc ttttggacga ggcggaaaac
     1321 aaagtattcc aaatcgccga aagcacggcc aaatccaagc agggcttttt ggagatgccc
     1381 gatttgctga aagaagtcgt acagcgcatc gatatgctct actcgcgcga caatcccgat
     1441 gaagttaccg gtgtgtcgac agggttcatc gacctcgaca aaaaaacctc gggtctgcaa
     1501 cccggcgacc tgattatcgt tgccggtcgt ccgtctatgg gtaagaccgc cttttctatc
     1561 aatatcgccg aacacgttgc cgtagaaggc aagctgccgg ttgccgtctt ctcaatggag
     1621 atgggcggtg cgcaactggt catgcgtatg ctcggctcgg tcggacgctt ggatcaaagc
     1681 gttttgaaaa ccggcaggct cgaagacgaa cactggggtc gcctgaacga agcagtcgtc
     1741 aaactctccg acgcgcccgt gtacatcgac gagaccccgg gtctgaccgc gctcgaactg
     1801 cgcgcccgtg cccgccgtct cgcccgtcaa tttaacaata agcttggatt gattgtcatc
     1861 gactacctgc aactgatggc aggatccggc cgttccgaca accgagcttc ggagctggga
     1921 gagatttcac gttcgctcaa agcgttggcg aaagaattgc aagtccccat catcgccctg
     1981 tcgcaattga gccgcacggt cgaatcgcgt accgacaaac gccccatgat gtccgacctt
     2041 cgcgagtccg gcgcaatcga gcaggatgcc gacctgatta tgttcatgta ccgcgacgaa
     2101 tactacaacc aggactcacc catgaaaggc cttgccgaat gtatcatcgg caaacaccgc
     2161 aacggtcccg tcggtaaaat cttcctcaca tggacgggac aattcaccaa attcgacaat
     2221 gctgcctata ttcccgagga ggcaaagata gaggattaaa tggctatata aaaatttatt
     2281 aggcgaaatc aggcaaaatc gtttaaaatc atgctgagag attgccctaa aaaataaaac
     2341 gcggtcttga ggcatttttg cattcagccc gcatataatt gaaaatatag tggattaaca
     2401 aaaatcagga caaggcaacg aagccgcaga c
//
LOCUS       DAXHKG010000188         2429 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.188, whole genome shotgun sequence.
ACCESSION   DAXHKG010000188 DAXHKG010000000
VERSION     DAXHKG010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.188"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..332
                     /locus_tag="ACFMWP_001973"
     CDS             <1..332
                     /locus_tag="ACFMWP_001973"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892506.1"
                     /translation="NPHHRHSRAGGNPKTQRNRNLSEKTETPPTVIPAKAGIQQHNAA
                     GIYRKKQKPPPTVIPAKAGIQQPKNHRNLSAKTETPTAVIPAKAGIQTRRHGNLPNKT
                     VSLDSTS"
     gene            477..2246
                     /locus_tag="ACFMWP_001974"
     CDS             477..2246
                     /locus_tag="ACFMWP_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HFC5892507.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANATDTDEDEELESVVRSALVLQFMIDKEGNGEIESTGDIGWSIYYDDHNTLHG
                     ATVTLKAGDNLKIKQSGKDFTYSLKKELKDLTSVETEKLSFGANGNKVNITSDTKGLN
                     FAKETAGTNGDPTVHLNGIGSTLTDTLAGSSASHVDAGNQSTHYTRAASIKDVLNAGW
                     NIKGVKTGSTTGQSENVDFVRTYDTVEFLSADTKTTTVNVESKDNGKRTEVKIGAKTS
                     VIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTGQAD
                     KFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGWNLDSK
                     AVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSVSLG
                     AGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLNNRI
                     DNVDGNARAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDTGNWV
                     IKGTASGNSRGHFGTSASVGYQW"
BASE COUNT          745 a          613 c          590 g          481 t
ORIGIN      
        1 gaaaccctca ccaccgtcat tcccgcgcag gcgggaatcc aaaaacgcaa cgcaacagga
       61 atttatcaga aaaaacagaa accccaccga ccgtcattcc cgcaaaagcg ggaatccagc
      121 aacacaacgc agcaggaatt tatcggaaaa aacagaaacc cccaccgacc gtcattcccg
      181 caaaagcggg aatccagcaa ccgaaaaacc acaggaatct atcagcaaaa acagaaaccc
      241 ccaccgccgt cattcccgca aaagcgggaa tccagacccg tcggcacgga aacttaccga
      301 ataaaacagt ttccttagat tccacgtcct agattcccgc cttcgcggga atgacgagat
      361 tttaagttgg gggaatttat cagaaaaccc ccaaccccca aaaaccgggc ggatgccgca
      421 ccatccgccc ccaaaccccg atttaaccat tcaaacaaac caaaagaaaa aacaaaatga
      481 acaaaatata ccgcatcatt tggaatagtg ccctcaatgc ctgggtagtc gtatccgagc
      541 tcacacgcaa ccacaccaaa cgcgcctccg caaccgtggc gaccgccgta ttggcgacac
      601 tgctgtccgc aacggttcag gcgaatgcta ccgataccga tgaagatgaa gagttagaat
      661 ccgtagtacg ctctgctctg gtgttgcaat tcatgatcga taaagaaggc aatggagaaa
      721 tcgaatctac aggagatata ggttggagta tatattacga cgatcacaac actctacacg
      781 gcgcaaccgt taccctcaaa gccggcgaca acctgaaaat caaacaaagc ggcaaagact
      841 tcacctactc gctgaaaaaa gagctgaaag acctgaccag tgttgaaact gaaaaattat
      901 cgtttggcgc aaacggtaat aaagtcaaca tcacaagcga caccaaaggc ttgaattttg
      961 cgaaagaaac ggctgggacg aacggcgacc ccacggttca tctgaacggt atcggttcga
     1021 ctttgaccga tacgcttgcg ggttcttctg cttctcacgt tgatgcgggt aaccaaagta
     1081 cacattacac tcgtgcagca agtattaagg atgtgttgaa tgcgggttgg aatattaagg
     1141 gtgttaaaac tggctcaaca actggtcaat cagaaaatgt cgatttcgtc cgcacttacg
     1201 acacagtcga gttcttgagc gcagatacga aaacaacgac tgttaatgtg gaaagcaaag
     1261 acaacggcaa gagaaccgaa gttaaaatcg gtgcgaagac ttctgttatt aaagaaaaag
     1321 acggtaagtt ggttactggt aaaggcaaag gcgagaatgg ttcttctaca gacgaaggcg
     1381 aaggcttagt gactgcaaaa gaagtgattg atgcagtaaa caaggctggt tggagaatga
     1441 aaacaacaac cgctaatggt caaacaggtc aagctgacaa gtttgaaacc gttacatcag
     1501 gcacaaaagt aacctttgct agtggtaatg gtacaactgc gactgtaagt aaagatgatc
     1561 aaggcaacat cactgttaag tatgatgtaa atgtcggcga tgccctaaac gtcaatcagc
     1621 tgcaaaacag cggttggaat ttggattcca aagcggttgc aggttcttcg ggcaaagtca
     1681 tcagcggcaa tgtttcgccg agcaagggaa agatggatga aaccgtcaac attaatgccg
     1741 gcaacaacat cgagattacc cgcaacggca aaaatatcga catcgccact tcgatgaccc
     1801 cgcaattttc cagcgtttcg ctcggcgcgg gggcggatgc gcccacttta agcgtggatg
     1861 acgagggcgc gttgaatgtc ggcagcaagg atgccaacaa acccgtccgc attaccaatg
     1921 tcgccccggg cgttaaagag ggggatgtta caaacgtcgc acaacttaaa ggtgtggcgc
     1981 aaaacttgaa caaccgcatc gacaatgtgg acggcaacgc gcgcgcgggt atcgcccaag
     2041 cgattgcaac cgcaggtttg gctcaggcct atttgcccgg caagagtatg atggcgatcg
     2101 gcggcggtac ttatcgcggc gaagccggtt acgccatcgg ctactcgagc atttctgaca
     2161 ctgggaattg ggttatcaag ggcacggctt ccggcaattc gcgcggtcat ttcggtactt
     2221 ccgcatctgt cggttatcag tggtaagggc tttttcgcct gtctgctgtt ggggcaggcg
     2281 gaaggtttga agggaagggt ggcgatttgc cgcctgagac ctttgcaaaa ttccccaaaa
     2341 tcccctaaat tcccaccaag acatttaggg gattttccat gagcaccttc ttccagcaaa
     2401 ccgcccaagc catgattgcc aaacacatc
//
LOCUS       DAXHKG010000189         2389 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.189, whole genome shotgun sequence.
ACCESSION   DAXHKG010000189 DAXHKG010000000
VERSION     DAXHKG010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.189"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            77..2227
                     /gene="yccS"
                     /locus_tag="ACFMWP_001975"
     CDS             77..2227
                     /gene="yccS"
                     /locus_tag="ACFMWP_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HFC5892508.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIITTVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQENVANAYEALGSYLEAKADFFDPDEAEWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETSSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIVSTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          572 a          918 c          476 g          423 t
ORIGIN      
        1 agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actatattca cttcataaca
       61 ataaaccggt aaaaccatga aaaccccact cctcaagcct ctgctcatta cctcgcttcc
      121 cgttttcgcc agtgttttta ccgccgcctc catcgtctgg cagctaggcg aacccaagct
      181 cgccatgccc ttcgtactcg gcatcatcgc cggcggcctt gtcgatttgg acaaccgcct
      241 gaccggacgg ctgaaaaaca tcatcaccac cgtcgccctg ttcaccctct cctcgctcac
      301 ggcacaaagc accctcggca cagggctgcc cttcatcctc gccatgaccc tgatgacctt
      361 cggctttacc attttaggcg cggtcgggct gaaataccgc accttcgcct tcggcgcact
      421 cgccgtcgcc acttacacca cacttaccta cacccccgaa acctactggc tgaccaaccc
      481 cttcatgatt ttatgcggca ccgtactgta cagcaccgcc atcatccttt tccaaatcat
      541 cctgccccac cgccccgttc aagaaaacgt cgccaacgcc tacgaagcgc tcggcagcta
      601 cctcgaagct aaagccgact ttttcgatcc cgacgaagcc gaatggatag gcaaccgcca
      661 catcgacctc gccatgagca acaccggcgt catcaccgcc ttcaaccaat gccgttccgc
      721 cctgttttac cgccttcgcg gcaaacaccg ccacccgcgc accgccaaaa tgctgcgtta
      781 ctactttgcc gcccaagaca tccacgaacg tatcagctcc gcccacgtcg actaccaaga
      841 gatgtccgaa aaattcaaaa acaccgacat catcttccgc atccaccgcc tgctcgaaat
      901 gcagggacaa gcctgccgca acaccgccca agccctgcgc gcaagcaaag actacgttta
      961 cagcaaacgc ctcggccgcg ccatcgaagg ctgccgccaa tcgctgcgcc tcctttcaga
     1021 cagcaacgac agtcccgaca tccgccacct gcgccgcctt ctcgacaacc tcggcagcgt
     1081 cgaccagcag ttccgccaac tccagcacaa cggcctgcag gcagaaaacg accgcatggg
     1141 cgacacccgc atcgccgccc tcgaaaccag cagcctcaaa aacacctggc aggcaatccg
     1201 tccgcagcta aacctcgaat caggcgtatt ccgccatgcc gtccgcctgt ccctcgtcgt
     1261 tgccgccgcc tgcaccatcg tcgaagccct caacctcaac ctcggctact ggatactact
     1321 gaccgccctt ttcgtctgcc aacccaacta caccgccacc aaaagccgcg tccgccagcg
     1381 catcgccggc accgtactcg gcgtaatcgt cggctcgctc gtcccctact tcaccccgtc
     1441 tgtcgaaacc aagctttgga tcgtcatcgt cagtaccacc ctctttttca tgacccgcac
     1501 ctacaaatac agtttctcca ccttcttcat taccattcaa gccctgacca gcctctccct
     1561 cgcaggtttg gacgtatacg ccgccatgcc cgtacgcatc atcgacacca ttatcggcgc
     1621 atcccttgcc tgggcggcgg tcagctacct atggcccgac tggaaatacc tcacgctcga
     1681 acgcaccgcc gcccttgccg tatgcagcaa cggcgcctat ctcgaaaaaa tcaccgaacg
     1741 cctcaaaagc ggcgaaaccg gcgacgacgt cgaataccgc gccacccgcc gccgcgccca
     1801 cgaacacacc gccgccctca gcagcaccct ctccgacatg agcagcgaac ccgcaaaatt
     1861 cgccgacagc ctgcaacccg gctttaccct gctcaaaacc ggctacgccc tgaccggcta
     1921 catctccgcc ctcggcgcat accgcagcga aatgcacgaa gaatgcagcc ccgactttac
     1981 cgcacagttc cacctcgccg ccgaacacac cgcccacatc ttccaacacc tgcccgaaac
     2041 cgaacccgac gactttcaga cagcactgga tacactgcgc ggcgaactcg acaccctccg
     2101 cacccacagc agcggaacac aaagccacat cctcctccaa cagctccaac tcatcgctcg
     2161 gcagctcgaa ccctactacc gcgcctaccg acaaattccg cacaggcagc cccaaaacgc
     2221 agcctgaaaa agtttcggca ttttgtaaga gagggcagat tgtcagacag gttgcaagat
     2281 agtggataaa gctttgcgca gggtaaatgc gtagcaactg aaccgtcatt cccacgaatc
     2341 tacattccgt cattcccacg aaaacagaaa accaaaaaca gaaacctaa
//
LOCUS       DAXHKG010000190         2383 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.190, whole genome shotgun sequence.
ACCESSION   DAXHKG010000190 DAXHKG010000000
VERSION     DAXHKG010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.190"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..1080
                     /locus_tag="ACFMWP_001976"
     CDS             <1..1080
                     /locus_tag="ACFMWP_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC5892509.1"
                     /translation="HEKTFFDKYGVRVSLLEDEDFIRAASMLAEEVFGFCIYKESKGS
                     GGRFYERCWLMGSEDVLYGRVHFGGQNNTILFELTGTGCGVAKEGWESRLFAFLTNAI
                     RPKITRVDIAKDFFNGEYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDEAKMTK
                     GKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFG
                     GAYPICERFAQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKFIFPELDKAKLF
                     ELIEPSHHKLPKSLAPEAYDCAFLKAQAIHEQPAFKPYKDPYYMYEYYENLEKQLEQQ
                     KHVNNEESYNNFIYDKFARLPISWA"
     gene            1125..1415
                     /locus_tag="ACFMWP_001977"
     CDS             1125..1415
                     /locus_tag="ACFMWP_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892510.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            1420..1617
                     /locus_tag="ACFMWP_001978"
     CDS             1420..1617
                     /locus_tag="ACFMWP_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892511.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            1691..1909
                     /locus_tag="ACFMWP_001979"
     CDS             1691..1909
                     /locus_tag="ACFMWP_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HFC5892512.1"
                     /translation="MKFINTCRKYGAKLAVVTAAPLALAAHANATLPDTAKNALEAAK
                     ADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            1916..2194
                     /locus_tag="ACFMWP_001980"
     CDS             1916..2194
                     /locus_tag="ACFMWP_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892513.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSLKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
BASE COUNT          715 a          550 c          541 g          577 t
ORIGIN      
        1 catgaaaaaa cctttttcga taaatacggc gttcgtgtaa gtcttttgga agacgaagat
       61 tttattcgcg ccgcgtccat gctcgccgaa gaagttttcg gtttctgtat ctacaaagaa
      121 tccaaaggct cgggcggtcg tttctatgag cgctgttggt tgatgggttc ggaagacgtc
      181 ctatacggtc gcgtccattt tggcggacaa aacaatacca tccttttcga actgaccggc
      241 accggttgcg gcgtcgcaaa agaaggctgg gaatcacgac ttttcgcatt cctgactaat
      301 gcaatccgcc caaaaatcac acgcgttgac atcgcaaaag actttttcaa cggcgaatac
      361 agcccgaacc aagcccgtga agaccgaaat aaaggtatgt ttacctgtca tcacgtcaaa
      421 ccaaaaggcg aatgtttggg gtcagattgg gaagaagacg atgaagccaa aatgaccaaa
      481 ggcaagacct atggtatcgg ctcccgtgaa tcgtccaaat atgtccgcgt ctatgaaaaa
      541 ggcaagcagt tgggcgataa aacaagcaca tggacgcgct ttgaaattga attcaaagca
      601 aaagacatcg ttatcccttt cgaagttttg cagaatccgg gcgaatattt cggcggcgca
      661 tatccgattt gcgaacgatt cgcccaaaag gcaacgcgca tacacgcggt taaggaagat
      721 aaggtcattt cagccgaccg ctaccttgaa tgggtaaaaa aacagttcgg acgtgcggca
      781 aacggtctga aattcatttt tcccgaattg gacaaagcca aactgtttga actgattgag
      841 ccgagtcatc acaagctgcc caagtctttg gctcccgaag cctacgactg cgcctttttg
      901 aaagctcaag ccattcatga acagcccgca ttcaaaccgt acaaagaccc ttactatatg
      961 tacgaatatt acgagaatct tgaaaaacag cttgaacagc aaaaacacgt caacaatgaa
     1021 gaaagctata acaacttcat ttacgacaaa ttcgcaagac taccgatttc atgggcttaa
     1081 agtgtctgcc cgaaagacgt ttaatcacac aaggaaacca aaaaatgaac atccaacttc
     1141 aaggccacat cgtcggcgtt aaaaaattca acggacaaat cgaaggcaag agcttcgact
     1201 attgccgcct gattgtcgcc acacccttag acagctccca aggcaacgca ttgggcagct
     1261 ctactactga atacgatttc ggcggctctg ccaatttcga gcagttccga aacgcccaat
     1321 ttcccatcga agcaaacctg aacgtggaaa tcgttactac gggcaaaacc caaaaactga
     1381 aagtcatcgg ttttcaactc gtgaagaaag gctgattgaa tgcagaaagt ctatgttgtc
     1441 cagtccgtat caacagggga ctttctgtat ctctctcctg aaacgggcga catcggacat
     1501 accaaattaa tcaccaatgc cgattatttc tacgacttcg aagaagcgat taacgcaggt
     1561 ttggaagaaa tcggcaacca atacgaattt gtcgtattcg gatttttgaa agactgattt
     1621 tcggatgttc ggcggtcgtc tgaaaaacgc tccatccatt accgccaaac actttttgaa
     1681 ggaaaatatc atgaaattta ttaacacctg ccgtaaatac ggcgcaaaac tggctgttgt
     1741 aacagctgct cccctggctt tggccgcaca tgcaaatgca acgttgcccg atacggcaaa
     1801 aaacgctttg gaagccgcaa aagcggacgg tatggaagcc ggttggattg tcgttggcgt
     1861 tttcgccgcg ctttttgtat tttccatcgt taagagagtg atgaagtaag acggcatgta
     1921 ctaccaagtc ggaaataaat gtcttgagaa gcaccaggct gaaaaccttt atttcagctt
     1981 ggtagtacca agaatcaaag aaaacggaca gattgtcagg ccggaatata acggcagcct
     2041 gtggaagatg tcggacggtc agccgctaag gcttttattg gcggaatgca gtctgaaaga
     2101 caacctgcaa agcggccttg aaacaggctg gatagtattc ggcatcctcg cgtccgttta
     2161 ctttgtttcc ctgctgaaaa aggttttgaa atgatggatt tttattttta tctcggcgtt
     2221 tccgtacccg tattaatcgg ggcggttctg tttaagaatt gagcgcatga agttatggtg
     2281 tcaaaatcag gctttcaaaa caatcattga aaggcagaac catgaacaag ccgtttatca
     2341 ctcaggcgca gttggcactt tataaatatc agccgtctag caa
//
LOCUS       DAXHKG010000191         2380 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.191, whole genome shotgun sequence.
ACCESSION   DAXHKG010000191 DAXHKG010000000
VERSION     DAXHKG010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.191"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            27..572
                     /locus_tag="ACFMWP_001981"
     CDS             27..572
                     /locus_tag="ACFMWP_001981"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC5892514.1"
                     /translation="MGKTVTLTSGHSNTDPGAVNGSDREADLAQDMCNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
     gene            569..775
                     /locus_tag="ACFMWP_001982"
     CDS             569..775
                     /locus_tag="ACFMWP_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892515.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            778..942
                     /locus_tag="ACFMWP_001983"
     CDS             778..942
                     /locus_tag="ACFMWP_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892516.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            945..1181
                     /locus_tag="ACFMWP_001984"
     CDS             945..1181
                     /locus_tag="ACFMWP_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892517.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTVKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSLVSVKRQEVENESRETAGE"
     gene            1153..1572
                     /locus_tag="ACFMWP_001985"
     CDS             1153..1572
                     /locus_tag="ACFMWP_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892518.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTLLAVSHHQGYKSAFAKQQAVID
                     KMEKDKAQALLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            1469..1774
                     /locus_tag="ACFMWP_001986"
     CDS             1469..1774
                     /locus_tag="ACFMWP_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892519.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1819..1989)
                     /locus_tag="ACFMWP_001987"
     CDS             complement(1819..1989)
                     /locus_tag="ACFMWP_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HFC5892520.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            2002..2220
                     /locus_tag="ACFMWP_001988"
     CDS             2002..2220
                     /locus_tag="ACFMWP_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892521.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
BASE COUNT          617 a          544 c          687 g          532 t
ORIGIN      
        1 caatcaatat tttttggaga tgatgaatgg gcaaaaccgt aaccttaacc tctggacaca
       61 gcaacaccga cccgggtgcg gtcaacggca gcgaccgtga ggcggacttg gcgcaggata
      121 tgtgcaatat cgtggctgct attttgcgcg atgactacgg tttgactgtt aaaaccgacg
      181 gcacgggcaa aggcaatatg ccgctgcgtg aagcggtcaa gctgattcgc ggctcggatg
      241 tggcgattga gtttcacacc aacgctgccg tcagcaaagc ggcgacaggc atcgaagcct
      301 tgagtaccgt taaaaacaaa cgctggtgtc aggtgttgag caaagccgtt gccaagaaaa
      361 ccggctggaa actgcgcggc gaagacggct ttaaacccga caatgcgggc cagcattcgc
      421 gcctggctta tgcacaagcc ggcggcattg tgtttgagcc ttttttcatc agcaacgaca
      481 ctgatttggc cttgtttaag acgactaaat ggggcatctg ccgcgcgatt gcggacgcga
      541 ttgcgatgga attgggggcg gcaagagtat gaatattatt ggtaaattga aagaagctgc
      601 ttcctatttt cttacaaaat tgattggaga aaatcctagt aatgagcagg taaaccgcgc
      661 acttatacag atgccaaatg ttcgtccgat acacacctat ccacgcccaa atttaagaaa
      721 ctcaggcgtg gcagccgcga aacgcgcggc gcgcaaacgc aagaatcgtc gttaatcatg
      781 ggacaggttg cgttttacga aaagatgatt gggctgtggt cggccaaaag ccgtgaggca
      841 agcgaacagg cagacttggc ggcgtttgaa tttgcggagg gcgaactggc caattatcag
      901 gaaatgctga aacggcacct gcaaaccaaa agtgtggaat agcaatgcgt attttggata
      961 tttttaaaaa cccagcgaca ggcaatgtgt cgcactcgaa actgtgggca aacgttgcct
     1021 gcgcggcggg gacggttaag tttgtgatgc tgcccgaccc gtcggcggag atttgggcgg
     1081 tgtatttggg cattgtcggc ggctatgcgg tggcgcgttc gttggtcagc gtcaaacgtc
     1141 aggaggtcga gaatgaatct cgtgaaactg ctggcgaata actggcaacc gattgccatc
     1201 atcgcgcttg tcggcacgct cttggcggtg tcgcaccatc aaggctacaa gtcggctttt
     1261 gcgaagcagc aggcggtcat tgacaagatg gaaaaagaca aagcgcaagc cctgctgttg
     1321 tcggctcaaa actacgcccg cgagctggaa caggcgcgtg cggaagctaa aaaatatgaa
     1381 gtcaaggcgc acgccgtcgg catggctttg gcgaaaaaac aggcggaagt cagccgtctg
     1441 aaaacggaaa ataaaaagga aatcgaaaat gtccttactc aagaccgtaa aaatgcaggc
     1501 ggcggttgta ttgacggctt tggccatcac ggcttgcagc tctacaagcg cgccctcggc
     1561 tacggaaatt aaggttgtcg aaaaggcggt catgccgaca ccgcctgccg cattgatggt
     1621 cgcgccggtg cgcccgaatc cgccgaaaga cggcaagacg gccacgctgt tggaacacgc
     1681 cgccgagttt ggcggctatg ttgccgaact ggaaaatcaa aatcaggctt ggcgcgactg
     1741 ggcgggcaat cactcccgca aagtcggaaa ctgacaaaaa agcccgcgta gggcgcgggc
     1801 tgagggtgaa agcggatttt atacctcttt tacaggggta gcggcggtag tgcttttcag
     1861 caaatcgact gcgtgctgac agttttgctt gctggtgtag ccttcgccct gagcgatgat
     1921 ttcatggttg gctgctttca aacgccaacg gtattcgcct tttgcgtctt tatagatttc
     1981 aaaatacata aggtttctcc tatgaatgag tacacgtttt cttaccgctt taacggcaag
     2041 tcctggtcat tgagcatttg ggcggacaac cctgaagaag ccagggcgaa atttcgggct
     2101 gcacgagaaa atgcgcacta tgacggcgaa gttgtagcaa aggtttatac atttgtaaat
     2161 atttcgtggg ttaagaaatt gtacaagcgg acaaaatatt taatgggtat caaagaatga
     2221 cctaccgtga attagttgaa cgtcagttgg ctgtgcgcca tgccgatttg gaattgggct
     2281 taagccgcgc acgcgaacaa gagccgtttg tcattcatgt ttccgatctg ttggataagg
     2341 caggcattga gtacgcggta cgcatggata aggattttca
//
LOCUS       DAXHKG010000192         2339 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.192, whole genome shotgun sequence.
ACCESSION   DAXHKG010000192 DAXHKG010000000
VERSION     DAXHKG010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.192"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            295..807
                     /locus_tag="ACFMWP_001989"
     CDS             295..807
                     /locus_tag="ACFMWP_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HFC5892522.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPEILLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            887..1966
                     /gene="aroB"
                     /locus_tag="ACFMWP_001990"
     CDS             887..1966
                     /gene="aroB"
                     /locus_tag="ACFMWP_001990"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HFC5892523.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGALGDIGFFEWLEQHMPELMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          569 a          720 c          566 g          484 t
ORIGIN      
        1 ttgataaaca tattatcttc aatatattca attggataat tgtttaccta agcaaagata
       61 attgcctttt cctgacaaat aagtgaaatc aacggattgt caaaacacag cctgaaataa
      121 aaaacctccc tgatttcttt tatttgtcct taaaatcaga aaggttcggg atggtcgggt
      181 tatttttcca aacgtaccgc cgccctgccg atttcgtata aaattccgcc gtaacccgac
      241 aagcccgaac cctgtcgccc cgaaaggcgg ggtgtcaaac attaaggaat tgtgatgaaa
      301 aactttaacg gcaaactcat cctcatcgga ctgatgggcg cgggcaaaac cacgctgggc
      361 cggcaaatgg cgcagcggct ggattaccgt ttttacgaca gcgatcacga aatcgccgca
      421 gccgccggcg ttcccatccc caccatattt gaaatggaag gcgaacaggg attccgttcg
      481 cgcgaaaccg ccatactcaa aaagctggtt atcctgcccc atatcgtcct gtccaccggc
      541 ggcggcgcgg tgttaaaaga agaaaaccgc gcccttatcc gcaaaagcgg cacggtcgtc
      601 tatctgcacg ccccgcccga aatcctgctc gaacgcacgc gctgcgacaa cagccgtcct
      661 ttgctgcaag ttgccgatcc tttggcgaaa ttacgtgaac tctacgccgc acgcgacccc
      721 gtttaccgcc aaaccgccga ctttaccgta gaatcggcaa actgccggga aaccgtgcaa
      781 accctgctca aacgcttatc ccgataaacc ggcatatgcg ccgcgcccag aaaaccaaac
      841 cgcgccccgc ccggcgggcc ggcggttcaa actttaagga acaacaatga aaacactgac
      901 cgtacacacc ccgtcccaca gctaccccat ctttatcggc aacggactgc tgccgcaggc
      961 aggaagcctg ctcaaaccgc atttgggcaa acgcgccgcc atcatcgcca acgaaaccgt
     1021 cgccccgctc tacctcggca cgcttcagac ggcattggat gcggcaggcg tatcccattt
     1081 cagcatcatc ctgcccgacg gcgaggcgca caaaaactgg cagacgctca acctcatctt
     1141 tgacgggctg atgcaaaacc gcgccgaacg caaaaccaca ttaatcgcac tgggcggcgg
     1201 cgtgatcggc gacatggtcg gctttgccgc tgccacctac cagcgcggcg caccgttcgt
     1261 tcaaataccg accacactgt tgagtcaggt cgactcatcg gtgggcggca aaaccgccat
     1321 caaccacccg ctcggcaaaa atatgattgg cgcgttttac cagccgcagg cggtgcttgc
     1381 cgacttggac acgctgcaca ccctgcccgc ccgcgaattg tccgccggta tggcggaagt
     1441 catcaaatac ggcgcgctcg gcgacatcgg cttttttgaa tggctggaac agcatatgcc
     1501 cgaactgatg acgctcgatc gggaaaaact cgcccaagcc gtgtaccgct gctgccaaat
     1561 gaaggcagac atcgtcgccc aagacgaaac cgaacagggc atacgcgcat ggctcaacct
     1621 cggacacacc ttcggacacg ccattgaaac cgagatgggt tacggcactt ggctgcatgg
     1681 agaagccatc gccgccggct gcgtgttggc ggcgcgtttg tccgaacaac tgggcaaaac
     1741 ctccgccgca gataccgcgc ggctcgccgc cctgctcgaa gccgccggac tgccgtccgc
     1801 gccacccgtg tttgcctttg aaaaatggct ggaacacatg agccacgata aaaaagtcag
     1861 cggcggcatc atgcgcttta tcggtctgaa ccggctgggc gaagccaaca tcaccgaaat
     1921 taccgacacg gacatcctcc gccgcaccct gcaaccgtat ctctgatttc ctctgccgat
     1981 gtgctgccgc gcgggtttga cgcacgatga tgattttcca tcatctttct ccgcaaaagc
     2041 gggaatccag tccgttcggt ttcggtcgtt tccgataagt tcccgttgct tttcatttct
     2101 agattcccac tttcgcagga atgacggtgg aaaggttttt gttgtttcgg agaagtttct
     2161 gcaaccctag aatctcgtta tttccacaaa aaacagaaac ccgaaacagc aacttaaaac
     2221 ctcgtcattc ccgcaaaagc gggaatccag tccgttcggt ttcggtcgtt tccgataaat
     2281 tcccgttgct tttcatttct agattcccac tttcgtggga atgacggcgg agaggtttt
//
LOCUS       DAXHKG010000193         2338 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.193, whole genome shotgun sequence.
ACCESSION   DAXHKG010000193 DAXHKG010000000
VERSION     DAXHKG010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.193"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            43..2256
                     /locus_tag="ACFMWP_001991"
     CDS             43..2256
                     /locus_tag="ACFMWP_001991"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC5892524.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKKLVLAARSLA
                     EAHYPADAVTPYGEPLSDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNVPDNPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGS
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          598 a          755 c          565 g          420 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac gaaagaccca tcatgaccgc catcagcccg
       61 attcaagaca cgcaaagcgc gactctgcaa gaattgcgcg aatggttcga cagctactgc
      121 gccgcgctgc cggacaacga taaaaaactt gtcttagccg cccgttcgct ggcggaagca
      181 cattaccccg ccgatgccgt cacgccgtat ggcgagccgt tgtccgacca cttcctcggc
      241 gcggcacaaa tggtcgacga actcgacctg ctgcccgatg ccgtcgccgc caccctgctt
      301 gccgacatcg gacgctacgt ccccgattgg aatctattgg tttccgaacg ctgcaacagc
      361 accgtcgccg agctggtcaa aggtgtggac gaagtgcaga aactcaccca cttcgcccgg
      421 gtggacagcc tcgccacgcc agaagaacgc gcccagcagg cagaaactat gcggaaaatg
      481 ctgctggcga tggttaccga catccgcgtc gtgttaatca aactggcgat gcgtacgcgc
      541 accctgcaat tcttaagcaa cgttcccgac aatcctgaaa agcgcgccgt tgctaaagaa
      601 accctcgaca tttttgcccc actcgccaac cgcttgggcg tgtggcaact caaatggcag
      661 ctcgaagatt tgggcttccg tcatcaagag ccggaaaaat accgcgaaat cgccctgctt
      721 ttggacgaaa aacgcaccga gcgcctcgaa tacatcgaaa acttcctcaa tatcctgcgt
      781 acggaactca aaaaatacaa tatccacttt gaagtcgccg gccgcccgaa acacatctac
      841 tccatttaca aaaaaatggt gaagaaaaaa ctcagcttcg acggcctctt tgacatccgc
      901 gccgtgcgga ttctggttga taccgtcccc gagtgttaca ccacgctggg cattgtccac
      961 agcctttggc agcctatccc cggcgagttc gacgactaca tcgccaaccc gaaaggcaac
     1021 ggctataaaa gtttgcacac cgtcatcgtc ggtcccgaag acaaaggtgt ggaagtgcaa
     1081 atccgcacct tcgatatgca ccaattcaac gaattcggtg tcgccgccca ctggcgttac
     1141 aaagaaggcg gcaaaggcga ttccgcctac gagcaaaaaa tcgcctggtt gcgccaactt
     1201 ttggactggc gcgaaaatat ggcggaaagc ggcaaggaag acctcgccgc cgccttcaaa
     1261 accgagcttt tcaacgacac gatttatgtc ctgaccccgc acggcaaagt cctctccctg
     1321 cccacgggcg cgacccccat cgacttcgcc tacgccctgc acagcagcat cggcgaccgt
     1381 tgccgcggtt cgaaagtcga agggcagatt gtgccgctgt ccaccccgct cgaaaacgga
     1441 cagcgcgtcg aaatcattac cgccaaagaa gggcatcctt ccgtcaactg gctttacgaa
     1501 ggctgggtca aatccaacaa ggcaatcggc aaaatccgcg cctacatccg ccagcaaaac
     1561 gccgacaccg tgcgcgaaga aggccgcgtc caactcgaca aacagcttgc caaactcacg
     1621 cccaaaccca acctgcaaga gcttgccgaa aatctcggct acaaaaagcc agaagacctc
     1681 tacaccgccg tcggacaagg cgaaatttcc aaccgcgcca tccaaaaagc ctgcggcacg
     1741 ctgaacgaac cgccgcccgt acccgtcagc gaaaccacca tcgtcaaaca gtccaaaatc
     1801 aaaaaaggcg gcaaaaacgg cgtgctcatc gacggcgaag acggtctgat gaccacgctt
     1861 gccaaatgct gcaaacccgc gccgcccgac gacattgtcg gcttcgttac ccgcgatcgc
     1921 ggcatttcgg tacaccgcaa aacctgcccc tctttccgac acctcgccga acacgcgccc
     1981 gaaaaagtac tggacgcaag ttgggcggcg ttgcaggaag gacaagtgtt cgccgtcgat
     2041 atcgaaatcc gcgcccaaga ccgctccggg cttttgcgcg acgtatccga cgcgctcgcc
     2101 cgccacaaac tcaacgttac cgccgtgcaa acccagtccc gcgacttgga agccagtatg
     2161 cggttcacgc tcgaagtcaa acaggtcaac gacctcccgc gcgtcctcgc cagcctcggc
     2221 gacgtcaaag gcgtattgag cgttacccgg ctttaaatac aaaaatgccg tctgaaagcc
     2281 gtataacgct tcagacggca ttttgattga cggggtttgc tattttttgt tgcatagt
//
LOCUS       DAXHKG010000194         2335 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.194, whole genome shotgun sequence.
ACCESSION   DAXHKG010000194 DAXHKG010000000
VERSION     DAXHKG010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.194"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            31..1248
                     /locus_tag="ACFMWP_001992"
     CDS             31..1248
                     /locus_tag="ACFMWP_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC5892525.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTAIAIIGLANIAGCVF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLKMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            1245..1376
                     /locus_tag="ACFMWP_001993"
     CDS             1245..1376
                     /locus_tag="ACFMWP_001993"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892526.1"
                     /translation="MKECRLKTLRRHFPNTPPVSGLHDTQISLIKPQTTAAIKPPFK"
     gene            complement(1451..1591)
                     /locus_tag="ACFMWP_001994"
     CDS             complement(1451..1591)
                     /locus_tag="ACFMWP_001994"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892527.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1604..>2335
                     /locus_tag="ACFMWP_001995"
     CDS             1604..>2335
                     /locus_tag="ACFMWP_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC5892528.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKS"
BASE COUNT          547 a          724 c          539 g          525 t
ORIGIN      
        1 cgcaaactta accgactcaa aatacacatt atgacgcaca ccgcatcgaa aacacccaaa
       61 ttttggctga ccatcaccgc cgccgcattc atcctgctga ttaccatcgg catgaggatg
      121 acgctcggac tgttcgtcca acccgtcgtc aacaccaccg aattgagcat tgcccaattc
      181 agcctcatca tcgccgtttt ccaactgatg tggggcatat cgcaaccatt gtccggcgcg
      241 cttgccgacc gtttcggcgc gttcagggta ttaagcggcg gcgccgtcct gctcgtctgc
      301 gcctgcctga ttgcccccaa catcccgact tattgggggc tgatgattgc cgtcgggctg
      361 ctgctcgcat tcggcaccgg ttccggcggt ttctccatca ttatggggca ggtcgccgcc
      421 caagtccccg cacacaaacg cggcttggca tccggactgg tcaacgccgg cggttcggca
      481 ggacaattcc tgttcgcacc gctggttcaa ggactcgtcg tcctgcccga agtcggctgg
      541 acgggcacat tttacgtttg gggcgcaatc gccctgctga ttctgcctgt ctcatggtgg
      601 cttgccggcg gcaacaacgc cgcccacacc caacacgccc aagccacaca cggacaaagc
      661 ctcggagaag cagtcaaaac cgccttcaaa accccaagct acatcctgct gcacctaagc
      721 ttttttgcct gcggcttcca catcgccttt ctcgtaaccc acctacccac ggaagtcgcc
      781 ctgtgcggac tgcccgccac cgtcgcatcc acagccatcg ccatcatcgg actggcaaac
      841 atcgccggtt gtgtgttctc aggctggtgc acaagccgcg ttcggggcaa atacgtcctg
      901 ttcggactgt acgcctcgcg cgccgcgatg atactcatct acattttttc gcccaagacc
      961 gacctcaact tctacatttt cgccgccgca ctcggattta cctggctcgc caccgtcacg
     1021 ccgaccgcct ccattaccgg caaactcttc ggcacacgct acctcgccac cctgttcgga
     1081 ctgaagatgc tcagccacca aatcggcgga ttcctcggct cgtacatcgg cggcatcgtg
     1141 attacacaat tcggcgacta cggctggatg tggtacgccg acgcactgct ggcgggaacc
     1201 gccgccctcc tcaacctccc catccgcgaa ccccgaaccg ccgcatgaaa gaatgccgtc
     1261 tgaaaaccct cagacggcat tttccaaaca ccccgcccgt ttccggactg cacgacacgc
     1321 aaatcagcct tatcaaaccg caaacaaccg ccgcgattaa accgccattc aaataagtcc
     1381 gttttccctt cgggtgtaaa atcatcacaa aacgcgatac tgtatatcgc cgggcgttat
     1441 gcagcggatt tcaggataaa atgccgtctg aagccgcccc tgcccgggcg ggcgaagcgt
     1501 cggatgcggt gcgcttggca aaggtttgcc cgccgcgccc cgtatccggc atttcatcaa
     1561 tgcagaccgc atttccaatc ctataattca aggtgtccgc cttatgaaaa tcgtttttat
     1621 cacaacagtc gcatccagca tttacggttt ccgcgccccc gtcattaaaa aattaatcgg
     1681 caaaaaccat caggtgtatg cctttgtatc ggagttttcc gataatgaat tggatattat
     1741 cagggaaatg ggggttacac ccgttaccta ccgttcaaac cgcagcgggc tgaacccgtt
     1801 ttccgatata aaatccacct tcctcatatt taaagaactc aaaaaaatat cgccggattt
     1861 ggttttccct tatttcgcaa aacccgtgat tttcggcact tttgccgcaa aactggcagg
     1921 cgtgcccaga atcgtcggga tgctggaagg tttgggattc gcatttaccc cgcaaccgga
     1981 aggcataccg ttaaaaacaa aaatcataaa ggggattttg attgccttgt accgcattgc
     2041 cctgccgatg ttggaaagcc tgattgtatt aaaccccgac gacaaagacg aactgacgga
     2101 caaatacggc atcaaaataa aaaacatcca tattttgggc ggaatcggtc tggatttgcg
     2161 gcaatatcct tattccgagg cggatattcc cgatgaaaaa gaacccgtaa aattcctctt
     2221 tatcggcaga tttctgaaag aaaaggggat tgatgatttt attcgggcgg cggaacaggt
     2281 taaggacaaa taccccgata cggtttttac cgctttgggc gcaatcgaca aatca
//
LOCUS       DAXHKG010000195         2290 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.195, whole genome shotgun sequence.
ACCESSION   DAXHKG010000195 DAXHKG010000000
VERSION     DAXHKG010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.195"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..354
                     /locus_tag="ACFMWP_001996"
     CDS             <1..354
                     /locus_tag="ACFMWP_001996"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892529.1"
                     /translation="FQTASPACFDMAAPPPRQKKTIRNASDRSGLFSGESAASEHTAH
                     AHIDLPSLAHRVHRRPLRLKIKLPSVVGITTQKNELLDIPMFFICFYIVMRSDKRPPD
                     ICLDGIVLLNFYKYV"
     gene            368..443
                     /locus_tag="ACFMWP_001997"
     tRNA            368..443
                     /locus_tag="ACFMWP_001997"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:402..404,aa:Glu,seq:ttc)
     gene            828..993
                     /locus_tag="ACFMWP_001998"
                     /pseudo
     CDS             828..993
                     /locus_tag="ACFMWP_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
     gene            complement(1043..1849)
                     /gene="thiD"
                     /locus_tag="ACFMWP_001999"
     CDS             complement(1043..1849)
                     /gene="thiD"
                     /locus_tag="ACFMWP_001999"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HFC5892530.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCKAVRTAKSYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          545 a          591 c          582 g          572 t
ORIGIN      
        1 tttcagacgg catcgcccgc ctgttttgat atggcggcac cccccccccg acaaaaaaaa
       61 acaatccgga acgcatctga ccgttccggc ttgttttcag gcgaatccgc cgcatcagaa
      121 catactgcgc acgcccatat tgacctgcca agtctggcgc atcgtgtgca tcgaagacct
      181 ttgcgcctca aaataaagct gccttccgtt gtcggcatta ccacgcaaaa aaatgaattg
      241 cttgatattc caatgttttt tatatgtttt tatattgtga tgcgatcaga caaacgcccc
      301 cctgacattt gtttagacgg catcgtattg ctaaatttct ataagtatgt ataatgtccg
      361 tttccacgcg cccatcgtct agaggcctag gacactgccc tttcacggcg gcaaccgggg
      421 ttcgaatccc cgtgggcgtg ccaattcaaa aacctgcttg tttcaagcag gtttttttat
      481 tatgaatcgt cattcccgca cccttcgtca ttcccgcgaa agcgggaatc tggagcgcag
      541 gattaaagaa accgttttat ccgataagct tccgtgccga caggtctgga ttcccgccta
      601 cgcgggaagg acggcagagg gtggacgatg ccgtctaaag cctgacaagg catttgatgc
      661 cgtctgaaac ttcgtcattc ccgcaccctt cgtcattccc gcaaaagcgg gaatctagag
      721 cgtagggttg aagaaaccgt tttatccaat aagtttccgt gccgacaggt ctggattccc
      781 actttcgtgg gaatgacgag tcttttataa cctgagacct ttgcaaaatg cctttccctt
      841 ttaaatttaa agagggggga gctgaaggat tattatcggg attgggagct ggtcgaatat
      901 aaagaagaat tgggcgcgat gcacgccaaa gacgaaaacg gcaatccgat acggtttaaa
      961 tttgtaacca tgctggcgaa aaagcctgaa taatcctcaa aaatgccgtc tgaacatttt
     1021 gtttcagacg gcatttttac gtctagtccc gatacgccca atgattgacc gggccgtgtc
     1081 ccgcgccgat ttccaaaggg tttgagattg ccgccgtaat gtaggacttg gcagtccgta
     1141 cggctttgca aacgtccgag ccttttgcca actcggcggt gatgcaggcg gaaaacgtgc
     1201 agcccgtgcc gtgcgtgtgg gcggttggaa agcgcgggct gtccaattcc agcgtttcat
     1261 tttgcgtaaa cagccaatcc gtgcagcgtc cgcttgtgct gccgttcaaa tgtccgcctt
     1321 tgataacgac atttttgaca ccgtaatcaa gcaggatttt tgccgcacgt tccgcatctt
     1381 tacggttttc gatatgcacg ccggtcaggg cttccgcctc gggcaggttg ggggtcaata
     1441 catccgtatc gggaagcagc aggcgcgtca gtgccgcaac ggcggaatcc tgcaacagcg
     1501 gcgcaccgcc tttggcaatc atcacagggt cgagtacgcg cctgccgaag tcgcagtgtt
     1561 tcagcttgtc ggcaacgcat tcgatgattt ccgccgtgcc gagcattcct attttgtagg
     1621 cgcggatgtc aaagtcttcc ctgattgctt ggatttgtgc ggtgatggtt tcggtcggga
     1681 cgagatgaac cgccgacacg cccaaggtat tttgcgcggt aacggcggtg atgacgcacg
     1741 ttccgaacac gccgcgcatc tgaaacgttt tcaaatccgc ctgaatgccc gcaccgccgc
     1801 ccgaatccga accggcgatg gtaagcgttt gcacaaaaga gcttttcatt tgttcctcct
     1861 taatattgtg tccgataaaa agggctaatg cctgtaaaaa agcacggcga tgccgtctga
     1921 aaaccgcagc gcggggtttg tggtgcatta tatgccgtat tgcaggacaa ggcacagggc
     1981 agggcggcgg ggtgcatcgt agcaactgta tttttgcccg acggggtgaa aaatacagtt
     2041 gctacaccca ctgataatga aaaaagagag caatgccgtc tgaaccgcgt gttgcggcga
     2101 gcataaaccg gcacgcttta ttcgtcattc ccacaaaaac agaaacctaa aattccgtca
     2161 ttcctacgaa agcgggaatc cagtgtgttc ggtttcagtt gtttttgggt ttcgggtgat
     2221 ttccaaatcg aaacctttgc aaaattcccc aaaatcccct aaattcccac caagacattt
     2281 aggggatgtt
//
LOCUS       DAXHKG010000196         2171 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.196, whole genome shotgun sequence.
ACCESSION   DAXHKG010000196 DAXHKG010000000
VERSION     DAXHKG010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.196"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="ACFMWP_002000"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="ACFMWP_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HFC5892531.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESSDMRPLFDTILKHTPAPSGSADEPLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(1930..>2171)
                     /locus_tag="ACFMWP_002001"
     CDS             complement(1930..>2171)
                     /locus_tag="ACFMWP_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892532.1"
                     /translation="LPKLVRTQKAYSFKRHCSTCCREAEPDTETRRGDMPLEKWRQFL
                     DWVGKTPSETASRSRKARPNKKCRLNFFQTASSII"
BASE COUNT          544 a          630 c          570 g          427 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgcgccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgatacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaata
      481 aaatcgacaa gccgtctgca cgtccgagct gggttatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttacgct tcaggtttga
      601 gcggctttgc caagctggaa gaaaccgacg agagcagcga tatgcgcccg ctgttcgaca
      661 ccatcttaaa acacacgccc gcaccgagcg gcagcgcgga cgagccgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg catcggtcgt atcttgaacg
      781 gacgcatcaa acccggccaa accgttgccg tcatgaacca cgagcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gcttggaacg cgtaccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggcatcggc gtaaccatca
      961 ccgacaaaga caaccccaaa ggcctgccga tgttgagcgt ggacgaaccg acgctgacga
     1021 tggactttat ggtcaacacc agcccgctgg cgggtacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 acaccgccga tgccgacgtg ttccgcgtat ccggacgcgg cgagctgcac ctgaccattt
     1201 tgttggaaaa tatgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cttatgaaaa cctgaccgtg gacgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggtttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccacgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcccggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggccgta
     1621 tgttcgtatc gcccaacgac aaaatctacg aaggtatgat tatcggcatc cacagtcgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgtgccagcg
     1741 gtaccgacga agccgttcgc ctgaccacgc cgattaagct gacgctggaa ggtgcggtcg
     1801 agtttatcga cgatgatgag ctggtagaaa tcacgccgca atccatccgc ctgcgcaagc
     1861 gttacctgag cgaattggaa cgccgccgcc atttcaaaaa gctagattga tgtttactgg
     1921 atttaatgtt taaatgatac tcgatgccgt ctgaaaaaag ttcagacggc attttttatt
     1981 cggacgggct ttgcggcttc ttgaagctgt ttcagacggc gtttttccta cccaatcaag
     2041 aaactgccgc catttttcca gcggcatatc gccccgtcgc gtttcggtat cgggttcggc
     2101 ttcccggcag catgtcgaac aatgccgttt gaaggaatac gccttttgag tccttacaag
     2161 cttaggaaga g
//
LOCUS       DAXHKG010000197         2125 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.197, whole genome shotgun sequence.
ACCESSION   DAXHKG010000197 DAXHKG010000000
VERSION     DAXHKG010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.197"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            123..1508
                     /locus_tag="ACFMWP_002002"
     CDS             123..1508
                     /locus_tag="ACFMWP_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HFC5892533.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFSIV"
     gene            1528..2046
                     /locus_tag="ACFMWP_002003"
     CDS             1528..2046
                     /locus_tag="ACFMWP_002003"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HFC5892534.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
BASE COUNT          446 a          645 c          572 g          462 t
ORIGIN      
        1 gttcaaataa acaggaatat aacttcagac aaacaactta ccgcccgatt tgtgctatcg
       61 ttttcgcaca acttaaaaaa cctgacaatt ttgtactttt attacagaga aaggctttac
      121 aaatggacgg ctggacacag acgctgtccg cgcaaaccct gttgggcatt tcggcggcgg
      181 caatcatcct cattctgatt ttaatcgtca aattccgcat ccacgcgctg ctgacactgg
      241 tcatcgtcag cctgctgacg gctttggcaa ccggtttgcc cacaggcagc attgtcaacg
      301 acgtactggt caaaaacttc ggcggcacgc tcggcggcgt ggcgcttctg gtcggcctgg
      361 gcgcaatgct cggacgtttg gtcgaaacat ccggcggcgc acagtcgctg gcggacgcgc
      421 tgatccggat gttcggcgaa aaacgcgcac cgttcgcgct gggcgttgcc tcgctgattt
      481 tcggcttccc gattttcttc gatgccggac taatcgtcat gctgcccatc gtgttcgcca
      541 ccgcacggcg catgaaacag gacgtactgc ccttcgcgct tgcctccatc ggcgcatttt
      601 ccgtcatgca cgtcttcctg ccgccccatc cgggcccgat tgccgcttcc gaattttacg
      661 gcgcgaacat cggccaagtt ttgattttgg gtctgccgac cgccttcatc acatggtatt
      721 tcagcggcta tatgctcggc aaagtgttgg ggcgcaccat ccatgttccc gttcccgaac
      781 tgctcagcgg cggcacgcaa gacaacgacc tgccgaaaga acctgccaaa gcaggaacgg
      841 tcgtcgccat catgctgatt cccatgctgc tgattttcct gaataccggc gtatcggccc
      901 tcatcagcga aaaactcgta agtgcggacg aaacctgggt tcagacggca aaaataatcg
      961 gttcgacacc gatcgccctt ctgatttccg tattggtcgc actgtttgtc ttgggacgca
     1021 aacgcggcga aagcggcagc gcgttggaaa aaaccgtgga cggcgcactc gcccccgtct
     1081 gttccgtgat tctgattacc ggcgcgggcg gtatgttcgg cggcgttttg cgcgcttccg
     1141 gcatcggcaa ggcactcgcc gacagcatgg cggatttggg cattcccgtc cttttgggct
     1201 gtttccttgt cgccttggca ctgcgtatcg cgcaaggttc ggcaaccgtc gccctgacca
     1261 ccgctgccgc gctgatggct cctgccgttg ccgccgccgg ctttaccgac tggcagctcg
     1321 cctgtatcgt attggcaacg gcggcaggtt cggtcggttg cagccacttc aacgactccg
     1381 gcttctggct ggtcggccgc ctcttggaca tggacgtacc gaccacgctg aaaacctgga
     1441 cggtcaacca aaccctcatc gcactcatcg gctttgcctt gtccgcactg ctgttctcca
     1501 tcgtctgaca gacggaaagg atagtaaatg actacgcatt ttgtcgttat gggcgtatgc
     1561 ggctgcggca agaccaccgc cgcgctgtcc ctgcagaaac acctcggtca atgtccctat
     1621 gccgaaggcg acgagttcca cacccaagcc aaccgcgaca agatgggcgc gggtattccg
     1681 ctgaccgatg aagaccgcta tccgtggttg ggcaatctgc gcgactggat gacgcaacag
     1741 gcgcaaaacg gtgcgaacca caccatcgta acctgttccg ccctcaaacg cggctaccgc
     1801 gacattctgc gcggagccga aggcaaagct gccttcatcc acctcagtcc gccgcaagac
     1861 atcaacctcg agcgcatgat gtcgcgcaaa ggacattata tgaaagcagg gatgctcgat
     1921 tcgcaactgg aaatcctcga ggaactgggc gaaggcgaat acggggtcaa aatcgccaac
     1981 cccggcacgc ccgaagcggt cgaagccgat attctgaact gggttgcctc ggaaaacctg
     2041 ctttgaagca atatgccgtc tgaagcccga cacaggatgg gtttcagacg gcataaacat
     2101 cgggaacaga atggattaca ttgat
//
LOCUS       DAXHKG010000198         2054 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.198, whole genome shotgun sequence.
ACCESSION   DAXHKG010000198 DAXHKG010000000
VERSION     DAXHKG010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.198"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..78)
                     /locus_tag="ACFMWP_002004"
     CDS             complement(<1..78)
                     /locus_tag="ACFMWP_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892535.1"
                     /translation="MLPSKYEDNTLQIKEKSTERTAPFFC"
     gene            668..1483
                     /locus_tag="ACFMWP_002005"
     CDS             668..1483
                     /locus_tag="ACFMWP_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HFC5892536.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKTDQKAVSAQQAKE
                     QTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINL
                     IEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERL
                     LTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNNRINQTEED
                     SYSTSVGSCINGFTVQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSNKK"
     gene            1500..>2054
                     /locus_tag="ACFMWP_002006"
     CDS             1500..>2054
                     /locus_tag="ACFMWP_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892537.1"
                     /translation="MNEGEVVLTPEQIQTLRGYASRGDTYGGWRYLANLGDRYADNAA
                     AIVGKDTNLNGLNLWMKKGVENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINKNNGR
                     LPNTSEIERSYYKAVTYHGVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNEQA
                     VNNPNGSERDNRKQLISALDKGFDG"
BASE COUNT          686 a          332 c          419 g          617 t
ORIGIN      
        1 acaaaaaaac ggagcagttc tttctgtact tttttcttta atttgcagtg tgttatcttc
       61 atatttcgag ggtaacatat ctgctaatct agtacagccc caaaatatac caaaaacagc
      121 aaaacaaatt gtaaggatac gtataggctt tgtaaaggta gattgtgaaa aaagcagttt
      181 tttaaacgaa tgaaacggct tcgggctgaa atatatgctg atgccctgtc cttcccgtat
      241 atcttgtgtg ttgtcaaagt gcaggctgct ttgaaattgg cattacagtc gatgaaccac
      301 cattttgctt tatttcagcg ggcttgagat gtgtataaga atattgtttt gaataaattt
      361 aaagaaaatg ataatcgtta ttgacgattt ttaaaggaaa gcgtagagtg ccaattctat
      421 gaagcaatac ggtaagtaac aatgaaaata tctactgctt gggtatagag catatttcac
      481 aacccgtaac tattcttgcg gaaacagaga aaaaagtttc tcttctatct tggataaata
      541 tatttaccct cagtttagtt aagtattgga atttatacct aagtagtaaa agttagtaaa
      601 ttatttttaa ctaaagagtt agtatctacc ataatatatt ctttaactaa tttctaggct
      661 tgaaattatg agaccatatg ctactaccat ttatcaactt tttattttgt ttattgggag
      721 tgtttttact atgacctcat gtgaacctgt gaatgaaaag acagatcaaa aagcagtaag
      781 tgcgcaacag gctaaagaac aaaccagttt caacaatccc gagccaatga caggatttga
      841 acatacggtt acatttgatt ttcagggcac caaaatggtt atcccctatg gctatcttgc
      901 acggtatacg caagacaatg ccacaaaatg gctttctgac acgcccgggc aggatgctta
      961 ctccattaat ttgatagaga ttagcgtcta ttacaaaaaa accgaccaag gctgggttct
     1021 tgagccatac aaccagcaaa acaaagcaca ctttatccaa tttctacgcg atggtttgga
     1081 tagcgtggac gatattgtta tccgaaaaga tgcgtgtagt ttaagtacga ctatgggaga
     1141 aagattgctt acttacgggg ttaaaaaaat gccatctgcc tatcctgaat atgaagctta
     1201 tgaagataaa agacatattc ctgaaaatcc atattttcat gaattttact atattaaaaa
     1261 aggagaaaat ccggcgatta ttactcatcg gaataatcga ataaaccaaa ctgaagaaga
     1321 tagttatagc actagcgtag gttcctgtat taacggtttc acggtacagt attacccgtt
     1381 tattcgggaa aagcagcagc tcacacagca ggagttggta ggttatcacc aacaagtaga
     1441 gcaattggta cagagttttg taaacaattc aaataaaaaa taatttaaag gatcttatta
     1501 tgaatgaggg tgaagttgtt ttaacaccag aacaaatcca aaccttacgt ggttatgctt
     1561 cccgtggcga tacctatggc ggttggcgtt atttggctaa tttgggcgac cgttatgcgg
     1621 ataatgctgc tgcaattgtc ggtaaggata caaacttaaa tggtttgaat ttatggatga
     1681 aaaaaggggt ggaaaaccta tgggatgata cggtcggtaa aaagacccgt ttagagaaat
     1741 ttgatcgggt tgcattgcaa catttcagcc aatatgtaga tctaattaat aaaaataatg
     1801 gtagattacc taacactagt gaaattgaga gaagttacta taaagccgtt acctatcatg
     1861 gcgtttcttc tagtgcagct attgatttag ttattaatcg ttcacttccg gatatggcgg
     1921 atggttattg ggcattaggt ttggggatag aagccgaacg tatccacaat gagcaagcag
     1981 taaataatcc gaacggtagc gaaagggata atagaaagca gttaatatct gctttagata
     2041 aaggatttga tgga
//
LOCUS       DAXHKG010000199         1951 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.199, whole genome shotgun sequence.
ACCESSION   DAXHKG010000199 DAXHKG010000000
VERSION     DAXHKG010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.199"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(498..1580)
                     /gene="porB"
                     /locus_tag="ACFMWP_002007"
     CDS             complement(498..1580)
                     /gene="porB"
                     /locus_tag="ACFMWP_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HFC5892538.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVEVSRVKDAGTYKA
                     QGGKSKTATQIADFGSKIGFKGQEDLGNGMKAIWQLEQKASIAGTNSGWGNRQSFIGL
                     KGGFGTVRAGNLNTVLKDSGDNVNAWESGSNTEDVLGLGTIGRVESREISVRYDSPVF
                     AGFSGSVQYVPRDNANDVDKYKHTKSSRESYHAGLKYENAGFFGQYAGSFAKYADLNT
                     DAERVAVNTANAHPVKDYQVHRVVAGYDANDLYVSVAGQYEAAKNNEVGSTKGKKHEQ
                     TQVAATAAYRFGNVTPRVSYAHGFKAKVNGMKDANYQYDQVIVGADYDFSKRTSALVS
                     AGWLKQDKGAGKVEQTASMVGLRHKF"
BASE COUNT          464 a          429 c          498 g          560 t
ORIGIN      
        1 ttagcttgtg ggtatttacc ggaaaaaaca gaaaccgctc cgccgtcatt cccgcgcagg
       61 cgggaatcta ggtctgtcgg cacggaaact tatcaggtaa aacggtttct tgagattttg
      121 cgtcctggat tcccactttc gtgggaatga cgggatgcag gttcgtggga atgacggaat
      181 gtaggttcat gggaatgacg cggtgcaggt ttccgtacgg atgaatttgt cattcccgcg
      241 caggcgggaa tctaggtctg tcggtgcgga aacttatcgg gtaaaacggt ttcttgagat
      301 tttgcgttct agattcccac tttcgtggga atgacggaat gtaggttcgt gggaatgacg
      361 gcggagaagt ttctgctttc ccgataaatg cccactctcg tgggaatgaa ggctgccgca
      421 ttaaatagca aacgaatcat ttcaaataaa aaagcctgtc tgacgacagg ctttttgttg
      481 ataccaatct tttcagatta gaatttgtga cgcagaccaa ccatgctggc agtttgttcg
      541 acttttcccg cgcctttatc ttgtttcaac caaccggcag aaaccagagc ggaagtgcgt
      601 ttggagaagt cgtagtcggc accaacgata acttggtcgt attggtaatt tgcgtctttc
      661 atgccattca ctttagcttt gaagccgtgg gcgtaagaaa cgcgaggcgt tacgttgcca
      721 aaacggtaag cggcagtagc ggcaacttga gtttgctcgt gttttttacc cttggtagaa
      781 ccaacctcgt tgtttttagc agcttcatac tgaccggcaa cagaaacgta caggtcattg
      841 gcatcgtaac cggcaactac gcggtgtact tggtaatcct taacaggatg ggcatttgca
      901 gtatttactg caacacgttc tgcatcagtg ttcaaatcag catatttggc aaaagaacct
      961 gcgtattgac cgaagaaacc ggcattttcg tatttcagac cggcgtggta agactcacgg
     1021 ctggacttcg tatgtttgta tttatccaca tcattcgcat tatcgcgcgg aacgtattgt
     1081 acgctgccgc tgaagcctgc aaatacggga gagtcgtagc gtacggagat ttcacggctt
     1141 tctacacgac cgatagtacc cagtcccagt acatcttcgg tgttagaacc agattcccat
     1201 gcattgacgt tgtcgccgct gtctttcaat acggtgttca gattaccggc gcggacggta
     1261 ccgaagccgc ctttcaagcc gatgaaggac tggcggttac cccagccgct gttagtgccg
     1321 gcgatggagg ctttttgttc caactgccaa atggctttca tgccgttgcc gaggtcttct
     1381 tgacctttga aaccgatttt agaaccgaag tcggcaattt gggttgcagt tttagatttt
     1441 ccgccttgag ctttatatgt accagcatct tttacgcgag aaacttctac gcctgcttta
     1501 attgtaccgt acaaggtaac gtcagccatt gctgcaacag gcagggcagc cagtgtcagg
     1561 gcaatcaggg attttttcat tgctgtattc cttttcatag ttaagaaatt taagccagcc
     1621 gggctttcca agccgcttag ctttgcattt accgccgacg ttttcggcga ttccatgtct
     1681 gaaactatag atgttcctgt ctgaaaaaac aaacttctgc ctgtttttgt gtggaattcg
     1741 atgtgtattt tgaagggcgg atagagatat tgtgggtatt ttttgtttta taacatatgg
     1801 ttatttaaat tttttaagat ttgcattttt acaacactta ctcgggaggg tattggaggg
     1861 cattgcaaac cgggggttat aaagacggca aaaaacgcgc acgtggtttc tttcggaacg
     1921 ggcggatgca aaacccgacc ctgcggcagg a
//
LOCUS       DAXHKG010000200         1947 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.200, whole genome shotgun sequence.
ACCESSION   DAXHKG010000200 DAXHKG010000000
VERSION     DAXHKG010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.200"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            247..1704
                     /locus_tag="ACFMWP_002008"
     CDS             247..1704
                     /locus_tag="ACFMWP_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015333 - peptide:proton symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide:H+ symporter"
                     /protein_id="HFC5892539.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPIVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFIPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKCYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          439 a          579 c          443 g          486 t
ORIGIN      
        1 aaaccgccct atcggataag cccttaacag aaaaggcttt acccgcgccg tatcggaaca
       61 catcctctaa aatacaatcc gttgaattga aaaaaatata aaaacatccg cccgcgaaaa
      121 acggcagcgc gtcgtttgac aaagaatgaa aatatcggtt aaaaaccgat tttcatacaa
      181 aaaacaccgc tgccgtccgc atccgtttca gacggtattg agagaaaatc ttttaggaga
      241 acctttatgt cccggcatcc cgcccccacc ggagaaaaaa cattcttcgg ccaccccttc
      301 cagctttcca ccctcttcca tatcgaattg tgggaacgtt tttcatttta cggaatgcag
      361 ggcatcctgc tgatttacct ctactacacc gccgacaaag gcggcttggg catagacaaa
      421 accctcgccg gcggcattgt cggcgcatac agcggcagcg tgtacctgtc caccattttg
      481 ggggcgtggt ttgccgaccg agtatggggt gcggaaaaaa ccctcttcct ctcgggcatc
      541 gtcgtgatgc tcggacacat cgtccttgcc gccgccccgg gcctgtacgg ccttttaatc
      601 gggctgatat tcatcgcatt gggcagcggc ggcgtgaaat ctacggccag ttctatggtg
      661 ggcgcattat acgaacagga cgaaatgcgc ccgctgcgcg atgcgggatt ttccattttc
      721 tacatcgcca tcaatatcgg cggcttccta ggcccgctgc tgaccggcct gctgcaggaa
      781 aacatcggtt tccattatgg tttcggcgcg gcggcggtcg gtatggcatt cggcttgtgg
      841 cgttattcct tgggacgtaa aaacctgccc catcccatcg tcccccatcc gctttcaaaa
      901 ggacagggca aaactgcggc cgccgtcggc attgctctca tcgccgcact tgcaaccgcc
      961 atcaaaaccg ggcttgtcaa cctcgacaat ttctccggca tcctcttatc taccgtcatc
     1021 cttgccgtca ttgcctattt tgcccgcctg ctgactaatc cccgcgtcag ttccgacaac
     1081 aaacggcaca tcatcgccta catcccgctt ttcctgacca tctgtatgtt ttgggccgtc
     1141 tggtttcaga tttacaccgt agcaaccgtc tatttcgacg aaaccgtcaa ccgcaccatc
     1201 ggttcgttta ccgtgcccgt cgcctggaaa gattctatgc aaagcctgtg ggtcatcctg
     1261 ttttccggac ttatggcggc aatgtggaca aaaatggggc gcaaacagcc caaaaccccg
     1321 ctgaaattcg ctatggcggt atttgttacc ggcgcgtcgt ttttgggatt catccccttt
     1381 atttccgccg gcacgccgat gcctattgcg gttttcgcac tgattgtcct tgccatcacg
     1441 ataggcgaac tgatgatttc cccgattgcg ctgtccatct ccaccaaaat cgcaccgcct
     1501 ttattcaaaa cccaaatggt cgcccttaat ttccttgcct tttcattagg cttcactttg
     1561 ggcggcgtat tgtttgaaaa atgctatcag gcgggcgacg aaatcggctt ctatcggctg
     1621 ctgttctaca tcggcgcagc cacaggcttc ctgctgctcc tgctcgtccc caaattgaac
     1681 aaaatgctcg aaggcacaga ctaagtcccg ccccgatgcc gtctgaaccc ttcagacggc
     1741 atttttccgc ataatgaaac caaaccgttt ccacccgaca ggacaggctc cccccaaccg
     1801 gaaggcagcc tgccgattgt catttaaata tctgactgat tccgtctgtt tgcaagggaa
     1861 atagccgttt atttccgctt gggcggaaac cggttctatt gagtaaaagg cattttatcc
     1921 gactaaatta gtgctgcatc aacggaa
//
LOCUS       DAXHKG010000201         1945 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.201, whole genome shotgun sequence.
ACCESSION   DAXHKG010000201 DAXHKG010000000
VERSION     DAXHKG010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.201"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(42..365)
                     /locus_tag="ACFMWP_002009"
     CDS             complement(42..365)
                     /locus_tag="ACFMWP_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC5892540.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKARLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(353..592)
                     /locus_tag="ACFMWP_002010"
     CDS             complement(353..592)
                     /locus_tag="ACFMWP_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HFC5892541.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(715..1512)
                     /gene="truA"
                     /locus_tag="ACFMWP_002011"
     CDS             complement(715..1512)
                     /gene="truA"
                     /locus_tag="ACFMWP_002011"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HFC5892542.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGEAVSTTVAGRTDTGVHATAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESVPVRSPLLKNRAGWTHLKLDIGPMRRAAALLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSSGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          436 a          461 c          552 g          496 t
ORIGIN      
        1 ttaatccact ataatgaaca caatcaattc agactattca atcaggcaaa catctcctgc
       61 aatactgcaa acagtttttc agccgtactg ttgtctaaat ttccaagatg cttgaccaat
      121 ctggctttat ccacagccct aatctgttcg ggcaaaagca aaccgtcttt atcctgaaag
      181 cggacattga cgcggaacgg ggcaggacgg cttccgctcg tcataggaac gatcagcaca
      241 gtcttgagat agttgtgtat ttcaggagga gatactacga cacaaggacg tgtctttttg
      301 atttcgcttc ctacggtcgg gtctaaggag accagataga ttccgccgcg tactaccata
      361 tccattcttt atccgcttcg ttttcaattt cggaaaaaaa atgctcctgc tcggtttcga
      421 caagcattgc ggcagcttct gcccatcccc tgcgaacggt aggacagctt aaaatgatat
      481 tgcccttttc aactgtaaca gccaagctgt ctactgcccc tatttgaccc aataatgatt
      541 tgggcagaat cacgccttgc gagtttccca ttttgcgtat gttgagaatc atatacgtac
      601 catattcacc agtttatgta ataacaatgt tagtaccttg atgaggtagt gtcaacattg
      661 aaaaagattg cctgacagtt tgtccgattt caaaatctcc gcgacaagaa tgttttaaag
      721 ccattcgggg atttgggggc ggatgatgcc gtatgcctcg ggatagtcga cgccggtcag
      781 gtaaagtccg tcgggcatga aggtcggcgg ggctttgagg cggctgcgtt cttgaatcag
      841 tgcggcgaag ccttcgacgc tgagtctgcc gctgccgaca tagacgagcg cgcccatgat
      901 gttgcgtacc atatggtgca aaaaggcgtt gccgtgcaaa tcgaggcgga cgagtcctga
      961 gctttgggta aggtcggcgc ggtagatggt tttgacgggg gattttgcct ggcattcggc
     1021 ggcgcggaag ctggagaagt cttgttcgcc gatcaataag gcggcagccc ggcgcatcgg
     1081 cccgatgtcg agtttgaggt gtgtccagcc tgccctgttt ttgagcaggg gggaacggac
     1141 ggggacggat tcgagcaggt agcggtaatg ccgtccgtat gcgtcgaagc gggcgtgaaa
     1201 ttcgggggcg acctgtcggg cgtgcaaaac ggcaatgcct tcgggcaggt gggcatttac
     1261 gccgcgcacc catgcctgtt ggggacgggc ggcagttgtg tcgaagtgga cgacttgggc
     1321 ggtggcatgc acgccggtgt cggtcctgcc ggcaacggtg gtggaaaccg cttcccctgc
     1381 tatttgggcg agcgcggttt ccaatgccgc ctgaacggtc ggtacgccgt cagcctgttt
     1441 ctgccagccg taaaagcggc tgccatcata ggatagggtt attgcccagc gttgtttttg
     1501 tgcggtatcc atcggatttg ggattcggat aaatgttcag actgcattgt atcgcagatt
     1561 ttgcagggaa acggcaaatg cccggggcgc gcggcgttgt ttggggagtt gggggggggg
     1621 atgcagttgc tacgaatcgc tatcctgtga attcaccctg tcaggagtgc ccgaatcgtc
     1681 attcccgcgc agtcgggaat ctaggacgta aaatctaaag aaaccatttt atagtggatt
     1741 aacaaaaacc agtacggcgt tgcctcgcct tagctcaaag agaatgattc tctaaggtgc
     1801 tgaagcacga gtgaatcggt tccgtattat ttgtactgtc tgcggcttcg tcgccttgtc
     1861 ctgatttttg ttaatccact atatccgata agtttccgca ccgacaaaac tagattccca
     1921 ctttcgtggg aatgacggga tgcag
//
LOCUS       DAXHKG010000202         1846 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.202, whole genome shotgun sequence.
ACCESSION   DAXHKG010000202 DAXHKG010000000
VERSION     DAXHKG010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.202"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            52..1560
                     /gene="nadB"
                     /locus_tag="ACFMWP_002012"
     CDS             52..1560
                     /gene="nadB"
                     /locus_tag="ACFMWP_002012"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HFC5892543.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASHH
                     AQGGIAAAWSREDDIEKHVADTLEAGAGLCNEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NYDGLHLTREGGHTCRRIAHVADYTGEAVMQSLIAQIRRRPNIRVCERQMALDIQTES
                     GAACGLTVLDCRTQETHRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPR
                     DIVARAIAAETAKQTQDFVSLDISHQPAAFVRQHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQTVPSKRSSENTSAEADIFSDGIQNTFSRPALQAFNQRHLGILRNDTGLRR
                     AIAQLRLWKQNQTEPHTVSEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            1743..>1846
                     /locus_tag="ACFMWP_002013"
     CDS             1743..>1846
                     /locus_tag="ACFMWP_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC5892544.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPI"
BASE COUNT          443 a          616 c          461 g          326 t
ORIGIN      
        1 aatttaatcc actataccgt ttcagacgac ctctcaaaca aggacaacac catgcaaacc
       61 gattgcgacg tattgattgc cggaaacggg ctggcggcac tgacgctcgc cctgtcgctg
      121 cctgaatcgt tccgcatcgt cattttgtgc aaaaaccggc tggacgacac cgccagccat
      181 catgcgcaag gcgggattgc ggcggcgtgg tcgagagagg acgacatcga aaaacacgtt
      241 gccgatactt tggaagcggg cgcaggtttg tgcaacgaag ccgccgtccg caccatcctg
      301 tcgcagggca aaccggcaat cgaatggctg ctggcgcagg gcgtggcgtt cgaccgaaat
      361 tatgacggtc tgcacctgac acgcgaaggc gggcacacct gccgccgaat cgcccacgtc
      421 gccgactaca cgggcgaagc cgtcatgcag agcctgattg cccaaatacg ccgccgcccg
      481 aacatccgcg tttgcgagcg gcagatggcg ttggacattc aaaccgaatc aggcgcggcg
      541 tgcggactga ccgtcctcga ctgccgaacg caagaaaccc accgcatccg cgcccgccat
      601 accgtactcg caggcggcgg cttggggcag atttacgccg ccaccaccac gccgcccgaa
      661 tgcacgggcg acgccatcgc tatggcgata cgcgcaggct gcgcagtcga aaacctcgaa
      721 tttatccaat tccaccctac aggcttggca aggccgtctg aaaacggccg caccttcctg
      781 atttccgaag ccgtgcgcgg cgaaggcggc atcctgacca accaagcggg cgaacggttt
      841 atgccgcatt acgaccgccg cgccgaactc gcaccgcgcg acatcgttgc ccgcgccatt
      901 gccgccgaaa ccgccaaaca aacgcaagac ttcgtctcgc tcgacatcag ccatcaaccc
      961 gcagcgttcg tccgccagca ttttccgtcc atccatcgac actgtttatc ccaatgcggc
     1021 ttggacatca cgcgccaagc catccccgtc cgccccgtgc aacactacac ctgcggcggc
     1081 atccaaaccg accccagcgg cagaacttcc ctgccgcagc tctacgcctt aggcgaaacc
     1141 gcctgcacag ggttgcacgg agccaaccgc ctcgccagca actccctact cgaatgcgtc
     1201 gttaccgcca ggcttgccgc ccaaaccatc gcggatggac aagcgttcca aaccgtaccg
     1261 tccaaaaggt cgtctgaaaa cacctccgcc gaagcagaca tcttttcaga cggcatccaa
     1321 aacacattca gccgccccgc cctgcaagcg ttcaaccaac gccatctcgg catcctccgc
     1381 aacgataccg gcctgcgccg cgccatcgcc caactgcggc tttggaagca aaaccaaacc
     1441 gaaccgcaca ccgtgtccga atacgaaaac cgcaacctgc tcgaatgcag cctcgccgtc
     1501 gcccaagccg catacaggcg gagacagaac atcggcgcgc attttaatag tgattgttaa
     1561 ggttggctgg ttagaaaaaa tcgttcaaat gaattttaat agcatggtta agagattggc
     1621 attcagtttt tagggttgcg taagttgggt tatcaatctg ttctaaaagc agaaaggccg
     1681 agacctttgc aaaattcccc aaaatcccct aaattcccac caagccattt aggggatttt
     1741 ccatgagcac cttcttccgg caaaccgcac aagccatgat tgccaaacac atcgaccgct
     1801 tcccgctatt gaagttggac caggtgattg attggcagcc gatcga
//
LOCUS       DAXHKG010000203         1843 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.203, whole genome shotgun sequence.
ACCESSION   DAXHKG010000203 DAXHKG010000000
VERSION     DAXHKG010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.203"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..743)
                     /gene="rfbA"
                     /locus_tag="ACFMWP_002014"
     CDS             complement(<1..743)
                     /gene="rfbA"
                     /locus_tag="ACFMWP_002014"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HFC5892545.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQIKPSARGELEITDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLH"
     gene            complement(806..>1843)
                     /gene="rfbB"
                     /locus_tag="ACFMWP_002015"
     CDS             complement(806..>1843)
                     /gene="rfbB"
                     /locus_tag="ACFMWP_002015"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HFC5892546.1"
                     /translation="GFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYA
                     FEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAA
                     RAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKVSSDHL
                     VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLF
                     VEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYED
                     LITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNVLNG
                     SYRLERLGTGK"
BASE COUNT          405 a          452 c          537 g          449 t
ORIGIN      
        1 atgtgcaggt tttggatgtt ttgcacggtt tggacgaacg aagccgcctc gtgcaggctt
       61 tcgtgcgtac cggtgtccag ccacgcgaaa ccgcgtccca atatttgaac ggagagcgag
      121 ccgtcttcca aatacatccg gttgaggtcg gtaatttcca attcgccgcg tgcggacggt
      181 ttgatttgtt tggcgaactc gacggcacgg ttgtcgtaga agtacaagcc ggttaccgcc
      241 caatcggatt tgggccgttg cggtttttct tcgatggaaa cggcgcggaa gttttcgtta
      301 aattcaacca cgccgaaacg ttcggggttt ttgacctgat aagcaaacac ggttgcgccg
      361 tgcgtttgcg ctgccgcctg tttcaatgtt tgcgtaaacg actgaccgta aaaaatattg
      421 tcgcccaaaa ccaagcaaac attgtcgttg ccgataaatt cttcgccgat gataaatgcc
      481 tgtgccaagc cgtccggact gggttgcacg gcataactga tggaaatgcc gaaatcgctg
      541 ccgtcgccaa gcaggcgttt gaaagaggcg ttgtcttcag gcgcggtaat caccaaaata
      601 tcgcggattc ccgccagcat caaaaccgac aaggggtaat aaatcatcgg tttgtcgtac
      661 acgggcagga gctgtttgga tacgccgcgc gtgatggggt agaggcgcgt gccgctgccg
      721 cctgccagta tgatgccttt catctttgtt ttcttccttt gcgatgggtt ttcagacggc
      781 attgcgtcgg gatgccgtct gaaaactatt ttccagtacc taaacgttcc aaacgatagc
      841 tgccgttcaa tacattttgc caccaggttt tgttgtccag ataccattgc acggttttgc
      901 ggaggccgga ctcgaaggtt tccaaaggca gccagcccaa atcccgcctg attttggctg
      961 cgtcgacggc gtagcgtacg tcatggccgg ggcggtcttg tacgaaagta atcaaatctt
     1021 cataacgcgc cacaccggcc ggtttttcgg gagcgagttc ttccagcagg gcgcagatgg
     1081 ttttgacgac ttcaatattg gctttttcat tgtggccgcc gatattgtag gtttcgccga
     1141 caacaccttc ggtaacaacc tgatacagtg cgcgcgcgtg gtcttcgaca aacagccagt
     1201 cgcggatttg cataccgtcg ccgtacacag gcagcggttt gccgtcaagc gcgttcagaa
     1261 tcatcaaagg aatgagtttt tccggaaaat ggtaaggacc gtagttgttg gagcagttgg
     1321 ttacaatggt cggcaagccg taagtacgca accacgcgcg gacgaggtgg tcgctggaca
     1381 ctttagaggc agagtagggg ctggacggcg cgtagggcgc ggtttcggta aacaaatcgt
     1441 ccgtgccgcc taaatcgcca tagacttcat cggtggaaat atggtggaaa cggaaggctt
     1501 cgtgctgttc agacggcatt tgttgccagt aggcgcgggc tgcttcaagc agattgaatg
     1561 tgccgacgat attggtttgg ataaactcgc ctgccgaacc gatagagcgg tcgacatggc
     1621 tttccgccgc caagtgcatc acggcatcgg gccggtgttg tgcgaatacg cggtcgagtt
     1681 cggcgcggtc gcaaatgtcc acttgctcga aagcatagcg gggattatcg gcaatgtcgg
     1741 tcagcgattc gagattgccc gcgtaggtca gtttgtcgag gttgacgacg gaatcttggg
     1801 tgtttcggat aatatgacgg acaacggcag aaccgataaa gcc
//
LOCUS       DAXHKG010000204         1833 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.204, whole genome shotgun sequence.
ACCESSION   DAXHKG010000204 DAXHKG010000000
VERSION     DAXHKG010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.204"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            56..1225
                     /gene="metZ"
                     /locus_tag="ACFMWP_002016"
     CDS             56..1225
                     /gene="metZ"
                     /locus_tag="ACFMWP_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HFC5892547.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVANLEALAELAHGIGAILVVDNSLLSPIGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAALIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1311..1517
                     /locus_tag="ACFMWP_002017"
     CDS             1311..1517
                     /locus_tag="ACFMWP_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HFC5892548.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
BASE COUNT          441 a          488 c          474 g          430 t
ORIGIN      
        1 attaaacaac gggcgcacgc tccgttgccg aacggataaa accgaggaat taccgatgag
       61 caaaaaactc catccgcaaa cgctcgccat acgcggcggc aaagaacaaa ccgaataccg
      121 cgaacacaat caggccttgt tcctgaccag cagcttcatg tgggacaacg cccaacacgc
      181 cgccgatttg ttttcaaaaa aaatcaaagg cttcacttat acccgtaccg ccaacccgac
      241 cacagccgcc tttgaaaaac gcatcgccgc tttggaaggt gcggaacgcg cggttgccac
      301 ttcgaccggc atgtccgcga ttcaggcggc gtttttcacc tttttgcagg cgggcgacca
      361 tgtggtttcc agccgcagcc tgttcggcac gaccgtcggc tttatcaata acatcgttac
      421 caaattcggc atcgaagtga gccacgtgtc gccgactgat ataaacgaat ggaaagccgc
      481 cgtcaaagcc aataccaaac tgctgttttt ggaaacgccg tccaacccct tgggcgaagt
      541 ggccaacttg gaggcattgg cggaattggc gcacggcatc ggcgcgattt tggtggtgga
      601 caacagcctg ctgtcgccca tcggctctca gcctttgaag cacggcgcag atatttccgt
      661 ttcttccgca accaaagcca tagacggaca cggacgcgtg atgggcggcg tgttggcggg
      721 ttcggaagaa ctgatggcgc aggccgccgt ttactgcaac tcttgcgggc tggcgatgtc
      781 gccgtttaac gcgtggcagt tgttgagcgg cgtggaaacc ctgtcgctgc gtatggaaaa
      841 acagttcgac aacgccctga aaatcgcaca atggctgcaa gcgcagccgc aggttcaagc
      901 cgtgtactac accggattgc ccgaccatcc gcaggcggcg cttatccgca aacagcaaaa
      961 cggcggcggc atcgtcatcg gctttgaagt cgccgaccaa gcagccgcgt ggaaagtcgt
     1021 ggacggcgtg gaactctttt cccgtaccgc caacctcggc gacgtgcgct cgaccatcac
     1081 ccatccgtgg acaaccacgc acggcaggat gcagcccgaa gaaaaactcg ccgccaacat
     1141 ccgccccgga ttggtgcgcc tgtcggtcgg tttggaatat gttggcgatt tgattgacga
     1201 tttgaaacag gcactcgcac gctgattgcg tgtttcagac ggcattggac agcagatgcc
     1261 gtctgaaacc cttatcgcgt atggcataca catcaacaat aggaaaaaat atggatgaag
     1321 cggtttttgc cgattgggcg ttgaaaatct gcctgaccgg tttgattatt tttttgggtt
     1381 ttatcgtttg gaatttgggc aaggagtcca aagcgggcaa attcggcatc gccattttgt
     1441 ttttggtttt gggcttgggc gtgttcggtt ttgtatttaa agaactgcta atcaagtttt
     1501 tggtattgcc caaataggct gccgcctgtc aaaatgctgt ctgaaatcat aaaaagtaat
     1561 ctgcacccta aaagtttgat ttaaccgcca actgattaag gtgcggattt ttatgacaaa
     1621 ataaaaatca tctttccgca gtcattccca cggacgcgaa agtctgtctt tttgaatccc
     1681 ggataatttt acatcgtcat tcccgcgcag gcgggaatct agtctgttcg gtttcggtca
     1741 tttacgataa attcctattg cttttcattt cctgattccc acttccgtgg gaatgacggc
     1801 ggagcggata aattctcgca atctaaaacc tcg
//
LOCUS       DAXHKG010000205         1801 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.205, whole genome shotgun sequence.
ACCESSION   DAXHKG010000205 DAXHKG010000000
VERSION     DAXHKG010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.205"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            509..1801
                     /gene="pilC"
                     /locus_tag="ACFMWP_002018"
                     /pseudo
     CDS             509..1801
                     /gene="pilC"
                     /locus_tag="ACFMWP_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247879.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
BASE COUNT          490 a          481 c          457 g          373 t
ORIGIN      
        1 atgtaggttt gcgggaatga cggtttaggt atttttatag caagccgtag ggtgggatgc
       61 cgccggaggg catcatattc ttggaatagc gcattaaaaa gagtatgata atggaaacac
      121 aaaagattcc ggcaatgccc gtgcgccgtt cccgtccgtc attcccgcgc aggcgggaat
      181 ccagacctgt cggaacggaa acttatcgga taaacggttt ctctagattc cgcatcctag
      241 attcccgcct gcgcgggaat gacggttcgg gtatttttat aaggcagatt cgcaaggtgc
      301 gccatagagt gggctaaagc ccgccctaca gcccgccctg cgaaacccac gaaacaccct
      361 gcgaaacata tgttccaaca cgcagggcgg cacataaggc gccgccctga ttcggaaggg
      421 cttgcacccc tcccggacaa agcctgatcc tgccgccccg aaggacggat gcccgaaggg
      481 cggggggttt gaccgaaaag gaaatacgat gaataaaact ttaaaaaggc gggttttccg
      541 ccataccgcg ctttatgccg ccatcttgat gttttcccat accggggggg gggggcgcag
      601 gcggaaaccc ataactacgc tattgtcatg aacgaacaaa atcagctgaa ggtaaagcag
      661 aaggattcat attcaacctt aagggaaaaa gacagggaac gcaaatttat ctataataaa
      721 ggctggcagg gtggaggctc tgtcttgttc gacaataccg atacccttgt ttcccgacaa
      781 agcggtactg ccgtttttgg cacagccacc tacctgccgc cctacggcaa ggtttccggt
      841 tttgatgcca acgctctgaa agagcgcaac aatgccgtcg attggattca taccacccgg
      901 gccgggctgg caggctacgc ctacaccaac gtcatatgca gaagccacca atgcccccaa
      961 cttgtctata aaacccgatt ttccttcgat aatcccgact tggcaaaaag aggaggcggg
     1021 ctggataggc acacagagcc aagccgcgac aattcgctca tttacaaatt gaaggatcat
     1081 ccatggttgg gcgtatcttt caatttgggc agcgagaata ccgtcaaaaa tagccaatca
     1141 tccagcagat tgatatcttc ttttagtgaa gacaataata atcaaaccat cgtctctacg
     1201 acagaaaacc accctatttc ccttggcgac gggcagcgcg aacataccgc cgtggcctat
     1261 tatctgaacg ccaaactgca cctgctggat aaaaaaggga ttaaagatat caccggcaaa
     1321 acagtgcggt tgggtgtctt gaagccgagc atcgatgtga agacacaaag gacggggctt
     1381 ggcggcttgc taggttttca tgctaagtgg gacattaaag ataccgggca gattccggtc
     1441 gagctcggcc tgccgcaaat caaagcaggc cgctgcatca acaaaccgaa ccccaatccc
     1501 aaagcccaag ccctttcgcc ggcactgact gcccccgcgc tgtggttcgg acctgtgcaa
     1561 aatggcaagg tgcagatgta ttccgcttcg gtttccacct accccgacag ttcgagcagc
     1621 caaattttcc tgcaaaacct ttcccgcaag gatgacacaa gcaaaccggg ccgctattcc
     1681 ctcaaaccct tgagtacgtc ggagattaaa agtaaagagc cgactttcac agggcggcaa
     1741 accgtcatcc gattggatgg cggcgtacag cagattaaac ttcaaggcaa tgaggtcact
     1801 a
//
LOCUS       DAXHKG010000206         1798 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.206, whole genome shotgun sequence.
ACCESSION   DAXHKG010000206 DAXHKG010000000
VERSION     DAXHKG010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.206"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            116..523
                     /locus_tag="ACFMWP_002019"
                     /pseudo
     CDS             116..523
                     /locus_tag="ACFMWP_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fe(3+)-pyochelin receptor"
     gene            667..1725
                     /gene="dinB"
                     /locus_tag="ACFMWP_002020"
     CDS             667..1725
                     /gene="dinB"
                     /locus_tag="ACFMWP_002020"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HFC5892549.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLIARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT          426 a          484 c          495 g          393 t
ORIGIN      
        1 gtcgatgtgc ttggcaatca tggcttgggc ggtttgccgg aagaaggtgc tcatgagaaa
       61 tcccctaaat gtcttggtgg gaatttaggg gattttgggg aattttgcaa aggtctcagg
      121 gtatacctac aataagagca ggtataggaa tgcagccgaa gtcaacgccg aacgccttgc
      181 caaaaattcc agtgcagacc cgtacaactt cagcaatttc acacccgtgc acatattccg
      241 tttcggaacg agcttccata taccgaatac ggggctgacc gtcggcggcg gcgtgtccgc
      301 acaaagcggc acaagcagcc tgtacaacat ccgtcagggc ggctacgggc tgatagacgg
      361 tttcgtccgt tacgaattgg gcaaacacgc caaattgagc ctcatcggta cgaacttaaa
      421 cggacgcact tattttgaga acaactacaa ccgtacgcgc ggcgcaaaca acttctatgg
      481 agagccgcgc actgtcagca tgaaactgga ttggcagttt taattgaaaa ccgtagtttt
      541 gcggatgccg tctgaaacag ggtatgtttc agacggcatt tttatggagg caggcctatc
      601 ggggcgtata tttggaattt gcccgatgcc ggcagtagaa tatccctttt atcctcagaa
      661 gagccgatgt cttcacgcaa aattatccac atcgacatgg acgcattcta cgcatcggta
      721 gagctgcgcg aacagccgca tttgaaaggg cggccggtgg tcgtcgcgtg ggagggcgcg
      781 cgttcggtga tttgcgccgc atcgtatgag gcacggcagt tcgggctgca ttccgcgatg
      841 tcggtggcaa cggcgaaaag gctgtgtccg caagcggtgt atgtgccgcc gcatttcgat
      901 ttgtaccgtc aggtttccgc gcagattcac gccgtattca ggcgttatac cgatttaatc
      961 gaacccttgt cgctggacga agcctatctt gacgttaccc gtaatttcaa aaacatccct
     1021 tacgccagcg aagttgccaa agaaatccgt gccgccattt ttgcggaaac aggtttgact
     1081 gcatccgcag gcatcgcgcc gaacaaattt ctggcgaaaa tcgcgtcgga ctggcgcaag
     1141 ccgaacgggc agtttgtgtt gccgccgcac aaagtcatgg catttttgga aaccctgcct
     1201 ttgggcaaaa tccccggcgt gggcaaggta acgctgaaaa aaatgcagtc gctgggtatg
     1261 cggacggcgg gcgacttgcg ccgtttcgag cgcggcgaac tcttaaacca tttcggacgc
     1321 tacggatacc gcctctatga tttggtgcgc ggtacggatg aacgccccgt caaagccgaa
     1381 cgcgaacgcc tccaaatctc cacagaaatc accctgcctg aagacctgcc gctcgagcag
     1441 gctgccggac acctgcccca tcttgctgaa gacctgtggc ggcaaatcac gcgcaaaaac
     1501 gtcgaagccc aaagcgtaac gctcaagctg aagacctacg atttccgcat catcacgcgc
     1561 acactgactt attcctccgt attgcccgac tgcgcagctc tgctgcaggc tgcgcaaatg
     1621 ttgatagcgc gcgtcccgcc gcagacggaa gacgcgttcc gccttatcgg tatcggcgtg
     1681 gggcatcttg tgccgaaaaa ccagcagcag gatttgtggg cgtaaaccgc tttacgcgcg
     1741 ccgtccaaaa aacatgccgt ctgaacggtt ttcagacggc atggctgctt tataatgg
//
LOCUS       DAXHKG010000207         1790 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.207, whole genome shotgun sequence.
ACCESSION   DAXHKG010000207 DAXHKG010000000
VERSION     DAXHKG010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.207"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..143
                     /locus_tag="ACFMWP_002021"
     CDS             <1..143
                     /locus_tag="ACFMWP_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC5892550.1"
                     /translation="GTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPA
                     AA"
     gene            458..829
                     /locus_tag="ACFMWP_002022"
     CDS             458..829
                     /locus_tag="ACFMWP_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892551.1"
                     /translation="MNITLGRNHQINCDEKDLYKFIGYLANHPNDVNLVFEKNSVQGA
                     WGDEGRIQFFSSKAQNIFVPLGFKFTAGVGNIAYRLNCNELFEMLSQLDFVSGGKQNL
                     STIKANIPSQFHAEFDAGANM"
     gene            complement(893..>1790)
                     /locus_tag="ACFMWP_002023"
     CDS             complement(893..>1790)
                     /locus_tag="ACFMWP_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HFC5892552.1"
                     /translation="IKMLSYCGVLSEEKFSRYYRYGVQNNKILQYIANRERNALNFIQ
                     AFSEKLLKDSGIYPKFADFFAQPNKNTFESMKTAFTDLVIQNTPKNTEVEVRRIFTKI
                     INPLAYKHNTFGTRKGSISNTPITLDELYYNRLNWRDKGKEKSLTRKEAQTLFADSAN
                     AANLNYLVNKATKFVKTLHKTSEVQRFDPTEANQAHHIFMASEFPDLASLPENLICLT
                     PNQHFNLAHPSNKTTVIDKHYQRICLMAKLDSIEQDNRANTGNYDYHEFIHVLNTGFN
                     TDQFDVSMSYETLKHRILMFDF"
BASE COUNT          537 a          287 c          376 g          590 t
ORIGIN      
        1 tcggtacgct gcaccgcaaa ttccgctatg cgcgggcagc ctatttcgga ctgattaaag
       61 tgagtgcgca aagccatctg aaggcgatgt gtttgaacct gttgaaagcc gccaacaggc
      121 taagtgcgcc cgctgccgcc taaaaggcag cccggatgcc tgattatcgg gtatccaggg
      181 aagattaagg gggtatttgg gtaaaattag gcggtatttg gggcgaaaac agccgaaaac
      241 ctgtgttggg gtttcggctg tcagcgaaaa ggtgaagaga ggtactttgc aaaggtctca
      301 acctgaatat gtcaaccaaa tcagcgacaa gctcggagaa ttttttggcc ggacgttgaa
      361 ataggagttt caattctttt aattcagcaa tagatactga taaaatgaaa atcttgagga
      421 atatatcatt aaaattaatt tgttaaggag ataattaatg aatattacat taggtcgaaa
      481 tcatcaaatc aattgtgatg aaaaggacct ttacaagttt atcggctatt tggcaaatca
      541 tcctaatgat gtaaatttag tctttgagaa aaatagtgtg caaggtgctt ggggtgatga
      601 gggacgtata cagtttttct caagtaaagc acaaaatatt tttgtgccac taggatttaa
      661 atttacggca ggcgtaggta atattgcata taggctaaat tgtaatgagc tttttgaaat
      721 gctatctcag ttagattttg tttctggtgg aaaacaaaat ctttcaacaa taaaagcaaa
      781 tattccgtct caatttcatg cagaatttga tgctggtgcg aatatgtaaa ttctaattta
      841 aaacacgaat ccgcttcatg agattcgtgt tttttatttt taaaatattt atttaaaaat
      901 caaacattaa aatacgatgc ttcaatgttt cgtaactcat agaaacatca aactgatctg
      961 tattaaatcc tgtattgagt acatgaataa attcatggta atcgtaattt cctgtattag
     1021 cacggttatc ttgctcaata ctgtccaatt tcgccatcag gcaaatacgc tggtaatgtt
     1081 tgtcaataac ggtggtttta ttgcttgggt gtgctaaatt gaaatgctgg tttggtgtca
     1141 ggcaaatcag attttcaggc agcgatgcta aatcaggaaa ttcgcttgcc ataaaaatat
     1201 gatgtgcctg attggcttct gtgggatcaa aacgttgaac ttcgctggtt ttgtgtagcg
     1261 ttttgacaaa ttttgtggct ttattaacta aataattcaa atttgcggca tttgcactat
     1321 cggcaaatag agtttgagct tctttgcgag tgagcgattt ttctttgcct ttatctcgcc
     1381 agtttaggcg attgtaataa agctcgtcta atgtaatggg ggtattggaa atactccctt
     1441 ttcttgtacc aaaagtatta tgtttataag ccaatggatt aatgattttg gtaaaaatac
     1501 ggcgaacttc tacttcggta tttttgggtg tgttttggat aacaagatcg gtaaacgccg
     1561 ttttcatact ttcaaacgta tttttattag gctgggcaaa aaaatcggca aattttggat
     1621 aaataccact gtcttttaat aatttttcac taaatgcttg gatgaaattt agggcatttc
     1681 tttcacgatt ggcaatatat tgcaggattt tattattctg tacgccgtac cgatagtatc
     1741 tagaaaactt ttcttcgctt aatacgccac aatagctcag cattttaatc
//
LOCUS       DAXHKG010000208         1752 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.208, whole genome shotgun sequence.
ACCESSION   DAXHKG010000208 DAXHKG010000000
VERSION     DAXHKG010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.208"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            94..1035
                     /gene="mafA"
                     /locus_tag="ACFMWP_002024"
     CDS             94..1035
                     /gene="mafA"
                     /locus_tag="ACFMWP_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC5892553.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTKNSGRKGERSAGLSVNGTGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPETAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            1039..>1752
                     /gene="mafB"
                     /locus_tag="ACFMWP_002025"
     CDS             1039..>1752
                     /gene="mafB"
                     /locus_tag="ACFMWP_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC5892554.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNP"
BASE COUNT          456 a          655 c          378 g          263 t
ORIGIN      
        1 tccgccgctc agacggcatt ttcgcccctt ttgtttacaa acccttaaaa tccatttaca
       61 ctcaaactcg ttcaaaacaa aacaaaccct gccatgaaaa ccctgcttct cctcatcccc
      121 ctcgtcctaa ccgcctgcgg cacactgacc ggcatacccg cccacggcgg cggcaaacgc
      181 tttgccgtcg aacaagaact cgtcgccgca tcgtcccgcg ccgccgtcaa agaaatggat
      241 ttgtccgccc tgaaaggacg caaagccgcc ctttacgtct ccgttatggg cgaccaaggt
      301 tcgggcaaca taagcggcgg acgctactct atcgacgcac tgatacgcgg cggctaccac
      361 aacaaccccg aaagtgccac ccaatacagc taccccgcct acgacactac cgccaccacc
      421 aaatccgacg cgctctccag cgtaaccact tccacatcgc ttttgaacgc ccccgccgcc
      481 gccctgacga aaaacagcgg acgcaaaggc gaacgctccg ccggactgtc cgtcaacggc
      541 acgggcgact accgcaacga aaccctgctc gccaatcccc gcgacgtttc cttcctgacc
      601 aacctcatcc aaaccgtctt ctacctgcgc ggcatcgaag tcgtaccgcc cgaatacgcc
      661 gacaccgacg tattcgtaac cgtcgacgta ttcggcaccg tccgcagccg taccgaactg
      721 cacctctaca acgccgaaac ccttaaagcc caaaccaagc tcgaatattt cgccgtcgac
      781 cgcgacagcc ggaaactgct gattgcccct gaaaccgccg cctacgaatc ccaataccaa
      841 gaacaatacg ccctctggat gggaccttac agcgtcggca aaaccgtcaa agcctcagac
      901 cgcctgatgg tcgatttctc cgacatcacc ccctacggcg acacaaccgc ccaaaaccgt
      961 cccgacttca aacaaaacaa cggtaaaaac cccgatgtcg gcaacgaagt catccgccgc
     1021 cgcaaaggag gataaaccgt gaaaccgctg cgcagactga caaacctcct tgccgcctgc
     1081 gccgtagcgg ccgccgcctt cggacagccc gccctcgcag cggacttggc gcaagacccg
     1141 ttcattaccg ataacgccca acggcagcac tacgaacccg gcggcaaata ccacctcttc
     1201 ggcgacccgc gcggcagcgt ctccgaccgc accggtcaaa tcaacgtcat ccaagactat
     1261 acccaccaga tgggcaacct gctcatccaa caggcggcaa tccaaggcaa tcttggttac
     1321 accgtccgct tttccggaca cggacacgaa gaacacgccc ccttcgacaa ccacgccgcc
     1381 gacagcgcaa gcaaagaaca aggcaacgtt gacgaaggct ttaccgtgta ccggctcaac
     1441 tgggaaggac acgaacatca tcccgccgat gcctacgacg gcccgaaggg cggcaattac
     1501 cccaaaccta cgggcgcacg agacgaatac acctatcacg tcaacggcac agcccgcagt
     1561 atcaaactca atccgaccga cacccgcagc atccggcaac gcatatccga caactacaac
     1621 aacctcggca gcaatttctc cgaccgcgcc gatgaagcca acagaaaaat gttcgagcac
     1681 aatgccaagc tcgaccgctg gggcaacagc atggagttta tcaacggcgt cgccgccggc
     1741 gcgctcaacc cc
//
LOCUS       DAXHKG010000209         1747 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.209, whole genome shotgun sequence.
ACCESSION   DAXHKG010000209 DAXHKG010000000
VERSION     DAXHKG010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.209"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            35..922
                     /gene="prmA"
                     /locus_tag="ACFMWP_002026"
     CDS             35..922
                     /gene="prmA"
                     /locus_tag="ACFMWP_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HFC5892555.1"
                     /translation="MPYQQITINVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQIAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGTKR"
     gene            940..1503
                     /gene="orn"
                     /locus_tag="ACFMWP_002027"
     CDS             940..1503
                     /gene="orn"
                     /locus_tag="ACFMWP_002027"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HFC5892556.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPSVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
BASE COUNT          468 a          538 c          433 g          308 t
ORIGIN      
        1 aattcaatcc actatatttc caagaaagcc cgttatgccc taccaacaaa tcaccatcaa
       61 cgtcaacgat gccgtcgccg aacgcctcgc cgacgcgctg atggaacacg gcgcactctc
      121 cgccgccatc gaagatgcct acgccggcac gcaaaacgaa caggcgattt tcggcgaacc
      181 cggtatgccc gccgaacaaa tctggcagca gagcaaagtc atcgccctgt tcggcgaaca
      241 cgacgaagcc gccgccatca tccaaatcgc cgcacaagaa tgcgggttaa aagacttggc
      301 atacaccggc gaaaccatcg aagaccaaga ctgggtgcgt ctcacgcaat cgcaattcga
      361 ccccatccga atttccgacc gcctgtggat taccccctct tggcacgaag cccccgaagg
      421 cactgccgtc aacctacgcc tcgatcccgg cctcgccttc ggcactggca gccacccaac
      481 cacgcgcctc tgcctcaaat ggctggatac gcaactcaaa aacggcgaaa gcgtcctcga
      541 ctacggctgc ggttcgggca tcctgaccat cgctgccctc aaactcggcg caggttctgc
      601 cgtcggcgtc gatattgacg aacaagccgt ccgcgccggc aaggacaacg ccgaacaaaa
      661 caacgtcgat gcacaattct tcctgcccga cggcctgcct caagggcaat tcgacgtagt
      721 tgtcgccaac atcctcgcca accctttacg tatgctcggc gaaatgctcg ccgcccgcac
      781 caaacaaggc ggccgcatcg tgttatccgg tttgttggac gaacaagccg aagaactcgg
      841 cggcatttac agccaatggt tcgatctcga cccggcggaa accgaagaag gctgggcgcg
      901 cttgagcggg acaaaacgct gaaacggaaa ggaaacaccg tgcaggacaa aaacaacctc
      961 tgctggctcg atatggaaat gacggggctt aatcccgaaa ccgaccgcat tatcgaagtc
     1021 gcgatgatta ttaccgactc ggatttgaat gtattggcgc aatccgaagt ttacgccgtc
     1081 caccaaagcg acgagctgct cgacaatatg gacgaatgga acaccgccac acacggtagg
     1141 acggggctga cacagcgcgt gcgcgaatcg ttgcataccg aagccgaagt cgaacagaaa
     1201 ctgctggact ttatgtcgga atgggtaccc ggacgcgcca cgccgatgtg cggcaactcc
     1261 atccaccaag accggcgttt tatggtcaaa tatatgccga aactggaaaa ctacttccac
     1321 taccgcaacc tcgacgtttc cacgctcaaa gagcttgcca aacgctggaa tccgtccgtt
     1381 gccaaaagcg tcgtcaaacg cggttcgcac aaggcattgg acgacatttt ggagagcatc
     1441 gaagaaatgc gccactaccg cgaacacttt ctgatttccg ccccgagagc cgaagcgcaa
     1501 taagaaacaa aaaatgccgt ctgaagcgca aatcctgcat ttcagacggc atttttacag
     1561 cagattgaaa tcaaaaatat acacgcccgt cattcccgcg caggcgggaa tccggaaggt
     1621 cgggcctgcc gttattttca atcattacag aaactgaaag gtctggattc ccgcctgcgc
     1681 gggaatgacg ggcgtgtgca ttcttatagt ggattaacaa aaatcaggac aaggcgacga
     1741 agccgca
//
LOCUS       DAXHKG010000210         1746 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.210, whole genome shotgun sequence.
ACCESSION   DAXHKG010000210 DAXHKG010000000
VERSION     DAXHKG010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.210"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            97..1470
                     /locus_tag="ACFMWP_002028"
     CDS             97..1470
                     /locus_tag="ACFMWP_002028"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC5892557.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
     gene            1650..>1746
                     /locus_tag="ACFMWP_002029"
     CDS             1650..>1746
                     /locus_tag="ACFMWP_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009118462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HFC5892558.1"
                     /translation="MSTQFDVAVIGAGPAGSVASALLRKKGYSGLN"
BASE COUNT          447 a          565 c          412 g          322 t
ORIGIN      
        1 gccgccttgt cctgattttt gttaatccac tatatttccc cgtcctatcg gtttcccgtt
       61 tcagacgaca taaggtctga aagaaagact acaattatga gtaatccatt ttcctcttta
      121 ggtttgggta cggaactcgt ttccgcactg accgcgcaag gttacgaaaa cccgacgccc
      181 atccaagccg ccgccattcc caaagcactc gccggtcatg atttgctagc cgccgcgcaa
      241 accggcacag gcaaaaccgc cgcctttatg ctgcccagtc tggaacgcct caaacgttac
      301 gccaccgcca gcacctcgcc cgcgatgcac cccgtgcgta tgctcgtcct tacccccacg
      361 cgcgaacttg ccgaccaaat cgaccaaaac gtgcagtcct acatcaaaaa cctgccgctt
      421 cgccacaccg tcttgttcgg cggtatgaat atggacaaac agaccgccga tttgcgtgcc
      481 ggctgcgaaa tcgtcgtcgc caccgtcgga cggctgctcg accacgtcaa acaaaaaaac
      541 atcagtttga acaaagtcga aatcgtcgtt ctggacgaag cagaccgcat gttggatatg
      601 gggtttatcg acgacatccg caaaatcatg cagatgctgc ccaaacaacg ccaaaccctg
      661 ctcttttccg ctaccttctc cgcaccgata cgcaaactgg cgcaagactt catgaacgcg
      721 cccgaaaccg tcgaagtcgc cgcgcaaaac accaccaacg ccaacgtcga acaacacatc
      781 atcgccgtcg ataccattca gaagcgcaac ctgctcgaac ggctgattgt cgatttgcat
      841 atgaaccagg tcatcgtgtt ctgcaaaacc aaacaaagcg tcgaccgcgt aacgcgcgaa
      901 ctggtgcgcc gcaacctgtc cgcacaggcg atacacggcg accgttccca acaaagccgg
      961 ctcgaaacac tcaacgcctt caaagacggc agcctgcgcg tcctcgtcgc caccgacatc
     1021 gccgcgcgcg ggctggacat tgccgaactg cccttcgtca tcaattacga aatgcccgcc
     1081 cagcccgaag actacgtcca ccgcatcggg cgcacggggc gcgcgggcgc ggacggcgtg
     1141 gcgatttccc tgatggacga atccgaacag aaaatgtttg aatccattaa agagctgacc
     1201 ggcaacaagc tgctcatcga gcgcatcgag ggcttcgagc cgcaatggtg ggaacagggc
     1261 ggcgcaaaac cggaaaaaac cgaaatgcgc gaaccgagac aacgcaaccg ctacgaatcc
     1321 gccagggctc agcgcgaaaa aaatacccga ccggaaacca cggcaaacga tgcgggcgcg
     1381 gcttgcggaa aaattgccgg acgcagccgc cgaagccgtc gggaacaccg gacgtgcgcc
     1441 ctgctccaac cgcgttacgg cgtaaaataa ccctgaaaat caaatgccgt ctgaacattt
     1501 cccgtttcag acggcatttt tcaaaccgga ctgacgcatt gggagcaacc gcccgcaccg
     1561 gataaatttc ttccgcaaac agtttcagac ggcatttgct gcctgtacaa tatcatttcc
     1621 ttttccactc aaaccatcag gatttcccaa tgtccaccca attcgatgtc gccgtaatcg
     1681 gcgcaggtcc ggcaggctcg gtcgcatccg ccctgctccg caaaaaaggt tatagtggat
     1741 taaatt
//
LOCUS       DAXHKG010000211         1727 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.211, whole genome shotgun sequence.
ACCESSION   DAXHKG010000211 DAXHKG010000000
VERSION     DAXHKG010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.211"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(47..1330)
                     /gene="hemL"
                     /locus_tag="ACFMWP_002030"
     CDS             complement(47..1330)
                     /gene="hemL"
                     /locus_tag="ACFMWP_002030"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HFC5892559.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVIEAMREAALGGLSFGAPTEGEIVIAEEIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1394..>1727)
                     /locus_tag="ACFMWP_002031"
     CDS             complement(1394..>1727)
                     /locus_tag="ACFMWP_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFC5892560.1"
                     /translation="YQTEEGIAQTVVKGKTTRAEVEARFGKRNPFGCYAYHEVSLPIY
                     NFLPTNFIYMKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVIRKEAG
                     KSLSQPEK"
BASE COUNT          386 a          485 c          471 g          385 t
ORIGIN      
        1 caatctgcca aacagatcga acagagaaac tctgtccgtc aaaacatcat gcagccatcg
       61 ccttgaacac ttcaaccgca accgcaaccg tttcgtcaat cagctcgggc gtatgcgcgg
      121 cagaaacgaa acctgcttca taagcggacg ggccgaaggc aatgccgcgg tcgagcatac
      181 cgtggaagaa gcgtttgaaa gcgtcaatat tggaacgcgc catatcggca taatttcgcg
      241 gcgcgtgtgc ggcgaaatac agaccgaaca taccgcccac gctgtcggcg gtgaactcga
      301 tgcccgccgc atccgctgcc gtccgaaaac cttgaaccaa ctgttcggta cgcgccgtca
      361 ggttttcata aaacccttcg cggcggatga tttccagcgt tttcaaaccg gcggcgacgg
      421 caatcgggtt gcccgacaag gtgcctgcct gatacacgcc gcccagcggg gaaatacatt
      481 ccataatgtc tttgcgtccg ccgaacgcgg caagtggcat accgccgccg atgactttgc
      541 ccatcgtggt caggtcgggc gtgatgccgt gcagcgattg tgcgccgccg agcgcgacgc
      601 ggaaaccggt catcacttcg tcgtaaatca acactgcgcc gtgtttttcg gtcaattcgc
      661 gcagggcttt gacgaaggct tcagacggcc taaccagatt catattgccg acaaaaggct
      721 ccaaaatcac acaggcaatg tcattgccgc tttgagcaaa ggcttcttcg agttgggcga
      781 tgttgttgta ttcgaggact aaagtgtgtt tggtaaagtc ggcaggcaca ccggcggaag
      841 agggattacc gaaggtgagc agaccgctgc ctgctttcac caacaggctg tcggaatggc
      901 cgtggtagca gccttcaaat ttgatgattt tgtcacggcc ggtaaagccg cgtgccagac
      961 ggatggcggt catggtggct tcggtaccgg agctgacaag gcgcagccgt tcgacggacg
     1021 gcatgatttt ggcgatttct tcggcaatga cgatttcgcc ttcggtaggc gcgccgaacg
     1081 acaaaccgcc caaggcagct tcgcgcatgg cttcgatgac ttcggggtgc gcgtgtccga
     1141 caatcgcggg cccccacgaa ccgacatagt cggtgtagcg cgtgccgttt tcgtcccaaa
     1201 catacgcgcc ttcggctttt ttgatgaagc gcggcacgcc gccgacgctg ccgaatgcgc
     1261 ggacggggga attcacgccg ccggggatga tggctttggc gcggtcgaat aaaatttcgt
     1321 tacggttcat atttatcctc aaatgccgtc tgaacggcag gtttcgggct tagaagcaga
     1381 aagtcccatt ttatcatttt tcaggttgcg acaaggattt gcctgcttct ttgcggatga
     1441 cgccaaccgc atcccggatg acggaacgct cgtctttttc cactttatgt gtaaagcggt
     1501 agtcccggac aactccttcc cagtcgtaat ccacacacca ctcccaatgc cggcgttctg
     1561 atttcatata aatgaaattg gtcggcaaaa aattataaat cggcaggctg acttcatgat
     1621 aggcataaca accgaaaggg ttgcgcttcc cgaaacgtgc ctctacctcc gcccgagtcg
     1681 ttttgccttt aacaaccgtt tgtgcgattc cctcttccgt ctgatat
//
LOCUS       DAXHKG010000212         1722 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.212, whole genome shotgun sequence.
ACCESSION   DAXHKG010000212 DAXHKG010000000
VERSION     DAXHKG010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.212"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(96..758)
                     /locus_tag="ACFMWP_002032"
     CDS             complement(96..758)
                     /locus_tag="ACFMWP_002032"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC5892561.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPPKSMDEIRNQ
                     ASHGAAGLLKLGTGITPDHPDYARWRTEYLDEYDSRYAQDTTLFGGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLAPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(771..1598)
                     /locus_tag="ACFMWP_002033"
     CDS             complement(771..1598)
                     /locus_tag="ACFMWP_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HFC5892562.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     LDFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPITLFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT          336 a          448 c          527 g          411 t
ORIGIN      
        1 cagcacctta gagaatcgtt ctctttgagc taaggcgagg caacgacgta ctggtttaga
       61 tttaatccac tatatgtttg tggggcggat atttttcagg gctgtatttt gtccagacat
      121 tcgagcagat cgagcggcgt gcggatgtgg aaatccgcct gccatgagcc ggtatcgtct
      181 tcgggagcga tgtagcccca ttcggcgagg acggttttca tgccggcgtt gcggcctgct
      241 tggatgtcgc gttcggcatc gccgacgtag agtgtgtgtt gcgggtcggc gtggatttgt
      301 ccgcacgcat acagcatggg tttgatgctg ggcttgggtt cgccgcaggt gtcgccgctg
      361 acgacgacgg cgggtgggat gatgaagccg agtttggggg cgagtttgtc ggtgaagcgc
      421 atgggtttgt tggtgatgat gccccatttg atgccgcgtc tgtcgagttc ggcgatgagt
      481 tcgtttacgc cgccgaagag ggtggtgtct tgggcgtagc ggctgtcgta ttcgtcaagg
      541 tattcggtgc gccatcgggc atagtcgggg tggtcggggg tgatgcctgt gccgagcttg
      601 agcagtcctg ctgcgccgtg gctggcttgg ttgcggattt cgtccatgct tttgggcggc
      661 agtccgtggc gggcgagcag ggtattgagt gcgccgccga ggtctagggc ggtgtcggca
      721 agcgtgccgt cgaggtcgaa gagtacggcg tgtatcatgt atgttccttt tcagacggta
      781 tttttgttct gtttcaaacc ctgctcgaaa tcttccagca tatccaattc aaagcggctg
      841 aagcccgctt tttcgcgcgc ttcgatgttc acatagccgc ggaagataaa catatcgtaa
      901 cgggcaatca gactgcggaa cagggtaatc ggttccaaac cgcgttcgcg gcagaggtgt
      961 tgataccaat ggttgccgat ggcgacatga cccacttcgt cgcggtaaat gatgtccaat
     1021 acgccgcagg tttccgaatc gccgcgctgc gccaccttcg cgcgtatccc cggcgtaacg
     1081 tccagcccgc gcgcttccaa cacgcgcggt accaacgcca tacgcaacag cgggtcgtag
     1141 gcggttttgt acgccatatc ccacaaatgg ttgtgcgcct cgaaactgcc gtaatcgaag
     1201 ccgaaagcgc gcaatctgtc gcgcatcagg cggaaatggt acacctcttc cttcgccact
     1261 ttcacccagt cgcggacaaa ctgaaacggc agcgtgcgga aacggtatgc cgcgtccaaa
     1321 gctagattga cggcgttgaa ttcgatatgc gcaatcgcgt gcagcatcgc cgcatagcct
     1381 tctgccgtgt tcattttgcg cggggtcagt tgtgacggcg cgaccaaaac cggcttgtcc
     1441 ggccgccctg cgcgggggaa atccagcggc ggcgtgtttg tttcagcacc gtccatgttc
     1501 tgaacggcgg caaacgcctc atccgtcagc cgtccttttt catctgggtc gcccgaaagc
     1561 agggcgcgtt ccagcaaagc ataaatatcg agtttcatct caagtccgcc gtgttcggaa
     1621 aacaaatatt atagcgtttt aaaaaaacaa gatgaggcat ataatctccg cgattcggca
     1681 ttccgcgccc aaaccgtcaa atatagtgga ttaacaaaaa cc
//
LOCUS       DAXHKG010000213         1646 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.213, whole genome shotgun sequence.
ACCESSION   DAXHKG010000213 DAXHKG010000000
VERSION     DAXHKG010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.213"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            295..1452
                     /locus_tag="ACFMWP_002034"
     CDS             295..1452
                     /locus_tag="ACFMWP_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HFC5892563.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     QNIQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGATQWG
                     NRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDMPVSVR
                     YDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQQTPKSQPTLVPAVVGKPGSDVYYAGL
                     NYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTGGYEE
                     GGLNLALAAQLDLSENGDKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGKKGE
                     NTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          413 a          393 c          422 g          418 t
ORIGIN      
        1 tgccgcgtgt gtttttttat ggcgttttaa aaagccggga ctgcatccgg gcagcagcgc
       61 atcggcccgc acgaggtctg cgcttgaatt gtgttgtaga aacacaacgg tttttgaaaa
      121 aataagctat tgttttatat caaaatataa tcatttttaa aataaaggtt gcggcattta
      181 tcagatattt gttctgaaaa atggtttttt gcggaggggg ggtataattg aagacgtatc
      241 gggtgtttgc ccgatgtttt taggttttta tcaaatttac aaaaggaagc cgatatgcga
      301 aaaaaactta ccgccctcgt attgtccgca ctgccgcttg cggccgttgc cgatgtcagc
      361 ctgtacggcg aaatcaaagc cggcgtggaa ggcaggaaca tccagctgca gttgaccgaa
      421 ccgctccaaa atattcaacc tcaggttact aagcgcaaaa gccgcatcag gacgaaaatc
      481 agcgatttcg gctcgtttat cggctttaag gggagcgagg atttgggcga agggctgaag
      541 gctgtttggc agcttgagca agacgtatcc gttgccggcg gcggcgcgac ccagtggggc
      601 aacagggaat cctttatcgg cttggcaggc gaattcggca cgctgcgcgc cggtcgcgtt
      661 gcgaatcagt ttgacgatgc cagccaagcc attgatcctt gggacagcaa taatgatgtg
      721 gcttcgcaat tgggtatttt caaacgccac gacgatatgc cggtttccgt acgctacgat
      781 tctccggaat tttccggttt cagcggcagc gtccaattcg ttccggccca aaacagcaaa
      841 tccgcctata caccggctca ttttgttcag cagactccta aaagtcagcc tactctcgtt
      901 ccggctgttg tcggcaagcc ggggtcggat gtgtattatg ccggtctgaa ttacaaaaat
      961 ggcggttttg ccgggaacta tgcctttaaa tacgcgaaac acgccaatgt gggccgtgat
     1021 gcttttgagt tgttcttgct cggcagcggg agtgatgaag ccaaaggtac cgatcccttg
     1081 aaaaaccatc aggtacaccg cctgacgggc ggctatgagg aaggcggctt gaatctcgcc
     1141 ttggcggctc agttggattt gtctgaaaat ggcgacaaaa ccaaaaacag tacgaccgaa
     1201 attgccgcca ctgcttccta ccgcttcggt aatgcagttc cacgcatcag ctatgcccat
     1261 ggtttcgact ttatcgaacg cggtaaaaaa ggcgaaaata ccagctacga tcaaatcatc
     1321 gccggcgttg attatgattt ttccaaacgc acttccgcca tcgtgtctgg cgcttggctg
     1381 aaacgcaata ccggcatcgg caactacact caaattaatg ccgcctccgt cggtttgcgc
     1441 cacaaattct aaatagcggg gcggtgaagc ggatagcttt gtttttgacg gcttgccttc
     1501 attctttgat tgcaatctga ctgccaatct gcttcagccc caaacaaaaa tccggatacg
     1561 gaagaaaaac ggcaataaag acagcaaata ccgtctgaaa gattttcaga cggtatttcg
     1621 cattttcggc ttggtttgca catata
//
LOCUS       DAXHKG010000214         1591 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.214, whole genome shotgun sequence.
ACCESSION   DAXHKG010000214 DAXHKG010000000
VERSION     DAXHKG010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.214"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(209..1585)
                     /locus_tag="ACFMWP_002035"
                     /pseudo
     CDS             complement(209..1585)
                     /locus_tag="ACFMWP_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
BASE COUNT          296 a          430 c          510 g          355 t
ORIGIN      
        1 cttgccggat gctgcaaaca acgccggttt gcattcctga tggcggtggt tttcttagac
       61 gaacgcccga acacgcagga atggataggc ttggggctgg ttacggcggg cgtgttgacg
      121 ctggcactga aacggtaaag ccgcaagaaa taaatgaaat gccgtctaaa aaactgtttt
      181 cagacggcat tttcgtttct gtccatcctc agcactcgac cacgcgcacg gatacgggga
      241 cggctttttt ccggagcgtg gcggcgagtc cggcaagcga ggtttctttg taggtcgcct
      301 tcatatcccg gccggtttgc agcatggttc ggatgacttc gtcgagcgag acttttttgt
      361 ccgtgccgtc ttccaaaagc gcgagcgtgc cgagtttgag ggctttttcg gcggcgatgc
      421 cgttgcgctc gatgcagggg atttgcacca gtccgccgac ggggtcgcaa gtcagcccca
      481 aatggtgttc catcgccatt tcggcggcgt tttccacttg tttgggcgtg ccgccgatga
      541 cttcggcgta tgcgcccgcc gccatcgaac acgctacgcc gacttcgccc tgacagccga
      601 catccgcacc ggaaatggag gcgttggtct tgtagaggat gccgattgcg cctgcggtga
      661 gcaggaagtt ttcgacgcgt tcctgtgtgg cgtgcggatt gaacttgcgg aaatagtgca
      721 atacggcggg aatgatgcct gccgcgccgt tggtcggtgc ggtaacgacg cgtccgccgg
      781 cggcgttttc ttcgttgacc gccatggcgt acaccatcgg ccagagctgg gtgttgacga
      841 tttcggtttc gcgcaggact ttgagcttgg cggcaagctg cggggcgcgg cggcggacgt
      901 tcaatcagcc gggcagttcg ccgtccgcac ccaagccgcg tttgatgcag ccttccataa
      961 cctcggcaac ggcagcggcg cggcggcgga tttcggcttc gccgcatccg gcaagcgcgg
     1021 cttcgtttgc caacacgact tcggagatgt cgagccggtt cagacggcat cgggcaagca
     1081 gttcggcgca actggtatag ggatagggaa cggctttttc cgtttccgcc tgccggtcaa
     1141 aatcttcttc ggtaacgaca aagccgccgc cgaccgaata ataaacctgt tcattcaata
     1201 ccgtgccgtc tgaagcatag gcggtaaaac gcaggctgtt ggggtgtttg ggcagcactt
     1261 gattgccgag tatgttcagg tcgcggtcgg ggatgaagcg gatttcttgc ccgttgagcc
     1321 ggaggatgtg ctgcgtgcgg atgcgttcga ggcgttcggg aatgccggca agcgggatgt
     1381 cgtgcggcag gctgccttcc aaaccgagca tcagcgcgtc aaatgtaccg tgtccgtatc
     1441 cggtcagtgc gagcgagccg taaatgtcga tgacgatgcg aacagcctgt gcatccaaac
     1501 ctgccgcaaa ggcggcggct gccttcatcg ggccgaccgt atgcgaactg gaaggcccga
     1561 taccgatttt gaaaatatag tggattaaat t
//
LOCUS       DAXHKG010000215         1579 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.215, whole genome shotgun sequence.
ACCESSION   DAXHKG010000215 DAXHKG010000000
VERSION     DAXHKG010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.215"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>1579
                     /gene="pilC"
                     /locus_tag="ACFMWP_002036"
     CDS             <1..>1579
                     /gene="pilC"
                     /locus_tag="ACFMWP_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC5892564.1"
                     /translation="NGNRDLGDIVNSPIVAVGEYLATSANDGMVHIFKQSGGDKRSYN
                     LKLSYIPGTMPRQYFDNDTSALKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRKVERN
                     GKDHVFMFGAMGFGGRGAYALDLTKADGSDPTAVSLFDVKNDNNGKNSNNSNNSVELG
                     YTVGTPQIGKTHNGKYAAFLASGYATKDINNGDNKTALYVYDLESSGTLIKKIEVPNS
                     KGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGQDPNQWSVRTIFSGNKPITSA
                     PAISQLKDKRVVIFGTGSDLSEEDVLSTDEQHIYGIFDDDTATTGSVNFSGLGGGLLE
                     QELKQEGKTLFLTDYKRSDGSGNKGWVVKLKEGQRVTVKPTVVLRTAFVTIHKYTGTD
                     KCGAETAILGINTADGGKLTKKSARPIVPEANTAVAQYSGHKQTANGKSIPIGCMQKG
                     NEIVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGTFKEGKKPARNNRCFSGK
                     GVRTLLMNDLDSLDITGP"
BASE COUNT          432 a          405 c          429 g          313 t
ORIGIN      
        1 aacggcaatc gcgatttggg cgacatcgtc aacagcccca tcgtggcggt cggcgagtat
       61 ttggctactt ccgccaacga cgggatggtg catatcttca aacaaagcgg cggggacaag
      121 cgcagctaca atctgaagct cagctacatc cccggcacga tgccgcgcca atattttgat
      181 aacgacactt ccgctctcaa agactccacc ctcgccaaag agctgcgcac ctttgccgaa
      241 aaaggctatg tgggcgaccg ctacggcgtg gacggcggct ttgtcttgcg caaagtcgaa
      301 cggaacggga aagaccatgt gtttatgttc ggcgcgatgg gctttggcgg cagaggtgca
      361 tacgccttgg atttgaccaa agccgacggc agtgacccga ccgccgtttc cctgtttgat
      421 gtcaaaaatg acaataatgg caagaatagc aataatagca ataatagcgt ggaattaggc
      481 tacaccgtcg gcacgccgca aatcggcaaa acccacaacg gcaaatacgc cgccttcctc
      541 gcctccggtt atgcgactaa agacattaac aacggcgaca ataaaaccgc gctgtatgta
      601 tatgatttgg aaagcagcgg cacgctgatt aaaaaaatcg aagtacccaa cagcaagggc
      661 gggctttcgt cccccacgct ggtggataaa gatttggacg gcattgtcga tatcgcctat
      721 gccggcgatc gcggcgggaa tatgtaccgc tttgatttga gcggtcaaga tcctaatcaa
      781 tggtctgtac gcaccatttt cagcggcaac aaaccgatta cttccgcgcc cgccatttcc
      841 caactgaaag acaaacgcgt ggttatcttc ggtacgggca gtgatttgag tgaggaggat
      901 gtactcagta cggatgaaca acatatttac ggtatcttcg acgacgatac ggcgacgacg
      961 ggtagtgtaa acttcagcgg tttgggaggc gggctgctcg agcaagagct taagcaggag
     1021 ggtaaaacct tattcctgac cgattataag cgatccgacg gctcgggcaa taaggggtgg
     1081 gtagtgaagc tgaaggaagg acagcgcgtt accgtcaaac cgaccgtggt attgcgtacc
     1141 gcctttgtaa ccatccataa atatacgggt acggacaaat gcggcgcgga aaccgccatt
     1201 ttgggcatca ataccgccga cggcggcaag ctgaccaaga aaagcgcgcg cccgattgtg
     1261 ccagaagcca atacggctgt cgcgcaatat tccggccata agcaaaccgc caacggcaaa
     1321 tccatcccta taggttgtat gcaaaaaggc aatgaaatcg tctgcccgaa cggatatgtt
     1381 tacgacaaac cggttaatgt gcgttatctg gatgaaaaga aaacagacgg attttcaaca
     1441 acggcagacg gcgatgcggg cggcagcgga acattcaaag agggtaaaaa acccgcccgc
     1501 aataaccggt gcttctccgg aaaaggtgtg cgcaccctgc tgatgaacga tttggacagc
     1561 ttggacatta ccggcccga
//
LOCUS       DAXHKG010000216         1567 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.216, whole genome shotgun sequence.
ACCESSION   DAXHKG010000216 DAXHKG010000000
VERSION     DAXHKG010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.216"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>1567
                     /gene="pilC"
                     /locus_tag="ACFMWP_002037"
     CDS             <1..>1567
                     /gene="pilC"
                     /locus_tag="ACFMWP_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC5892565.1"
                     /translation="NGNNSKRDLGDIVNSPIVAVGEYLATSANDGMVHIFKKNGGSDE
                     RSYNLKLSYIPGTMPRKDIENKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRQVELSG
                     QKHVFMFGAMGFGGRGAYALDLTKADGNDPTKASLFDVKDNGNNGNNGNNSVQLGYTV
                     GTPQIGKTHNGKYAAFLASGYATKTIDDQQNKTALYVYDLESSGTLIKKIDVPGGKGG
                     LSSPTLVDKDLDGTVDIAYAGDRGGKMYRFDLSSQSPDQWTVRPIFEGTKPITSAPAV
                     SKLKDKRVVIFGTGSDLSEEDVDKMDEQYIYGIFDDDTAATGTVNFTGTGGGLLEQHL
                     TEENKTLFLTDYKRSDGSGSKGWVVKLKDGQRVTVKPTVVLRTAFVTIRKYNDGGCGA
                     QTAILGINTADGGKLTKKSARPIVPADNTAVAQYSGHKKGINGKSIPIGCMQKGNEIV
                     CPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPDGKRSGKNNRCFSQKGVRT
                     LLMNDLDSLDITGP"
BASE COUNT          434 a          401 c          426 g          306 t
ORIGIN      
        1 aacggcaaca atagcaagcg tgatttgggc gacatcgtca acagccccat cgtggcggtc
       61 ggcgagtatt tggctacttc cgccaacgac gggatggtgc atatcttcaa aaaaaacggc
      121 ggcagtgatg aacgcagcta caatctgaag ctcagctaca tccccggcac gatgccgcgc
      181 aaggatattg aaaacaaaga ctccaccctc gccaaagagc tgcgcacctt tgccgaaaaa
      241 ggctatgtgg gcgaccgcta cggcgtggac ggcggctttg tcttgcgcca agtcgaactg
      301 agcgggcaaa aacacgtgtt tatgttcggc gcgatgggct ttggcggcag aggtgcgtat
      361 gccttggatt tgaccaaagc cgacggcaat gacccgacaa aagcctcttt gtttgatgta
      421 aaagataacg gcaataatgg caataacggc aataatagcg tgcaattagg ctacaccgtc
      481 ggcacgccgc aaatcggcaa aacccacaac ggcaaatacg ccgctttcct cgcctccggt
      541 tatgcgacta aaaccattga cgaccaacaa aataaaaccg cgctgtatgt gtatgatttg
      601 gaaagcagcg gtacgctgat taaaaaaatc gatgtacccg gcggcaaggg cgggctttcg
      661 tcccccacgc tggtggataa agatttggac ggcacggtcg atatcgccta tgccggcgat
      721 cgcggcggga aaatgtaccg ctttgatttg agcagtcaaa gtcctgatca atggactgta
      781 cgccctattt ttgaaggcac aaaaccgatt acttccgcgc ccgccgtttc caaactgaaa
      841 gacaaacgcg tggttatctt cggtacgggc agtgatttga gtgaggagga tgtggacaaa
      901 atggacgaac aatatattta cggtatcttc gacgacgata cagcggcgac gggtactgta
      961 aacttcaccg gtacgggagg cgggctgctc gagcaacacc ttactgagga aaataaaacc
     1021 ttattcctga ccgattataa gcgatccgac ggctcgggca gcaaagggtg ggtagtgaaa
     1081 ttgaaggacg gacagcgcgt taccgtcaaa ccgaccgtgg tattgcgtac cgcctttgta
     1141 accatccgca aatataacga cggcggctgc ggcgcacaaa ccgccatttt gggcatcaat
     1201 accgccgacg gcggcaagct gaccaagaaa agcgcgcgcc cgattgtgcc ggccgacaat
     1261 acggctgtcg cgcaatattc cggtcataag aaaggcatca acggcaaatc catccctata
     1321 ggttgtatgc aaaaaggcaa tgaaatcgtc tgcccgaacg gatatgttta cgacaaaccg
     1381 gttaatgtgc gttatctgga tgaaaagaaa acagacggat tttcaacaac ggcagacggc
     1441 gatgcgggcg gcagcggtat agaccccgac ggcaagcgtt ccggcaaaaa caaccgctgc
     1501 ttctcccaaa aaggggtgcg caccctgctg atgaacgatt tggacagctt ggacattacc
     1561 ggcccga
//
LOCUS       DAXHKG010000217         1550 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.217, whole genome shotgun sequence.
ACCESSION   DAXHKG010000217 DAXHKG010000000
VERSION     DAXHKG010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.217"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            180..509
                     /locus_tag="ACFMWP_002038"
     CDS             180..509
                     /locus_tag="ACFMWP_002038"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC5892566.1"
                     /translation="MGSLIIEDLQESFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            538..744
                     /locus_tag="ACFMWP_002039"
                     /pseudo
     CDS             538..744
                     /locus_tag="ACFMWP_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249814.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            965..1234
                     /locus_tag="ACFMWP_002040"
                     /pseudo
     CDS             965..1234
                     /locus_tag="ACFMWP_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247143.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          448 a          416 c          380 g          306 t
ORIGIN      
        1 aaatttaatc cactatattt ccatgaaaaa gcatggaacc tttacgaaaa aaataaaaca
       61 gtcaaacaaa cacagccgtt tcagctgcac cggagcagct gacgtttgag cggcatttga
      121 cttcgccgga cggtatgtta cccttgccgt tttaaccaac aagcaacgaa aggacaaata
      181 tgggcagcct gattattgaa gatttgcagg aaagcttcgg aaaagaagca gttaaaggca
      241 aagagattac cgtgcattac acaggttggc tggaagacgg caccaaattc gactccagcc
      301 tcgaccgccg ccagccgctg accatcacgc tcggcgtcgg acaagtcatc aaaggctggg
      361 acgaaggctt cggcggaatg aaggagggcg gcaaacgcaa gctgaccatc ccttcggaaa
      421 tgggctacgg cgcacacggc gccggcggcg tgattccccc gcacgccact ttgatatttg
      481 aagtcgagct gctgaaagtg tacgaataaa gctgcctggg caataccgtc tgacataatg
      541 gcttcaagca acgtaaacaa agaaatcaaa gacaaaaaac tctccctgtg ggccaagcgt
      601 caagacggtt cggtaaaatg gttctgcgga cagccggtta cgcgcaacga caccgccaaa
      661 gacgacaccg tcgccgccga caccgacacc gccaagaaga tcgacaccaa gcacctgccg
      721 tcaacctgcc gcgatgattc atctaccggt tgcatagaaa caccacgcgc cgacttcaaa
      781 cacttccaaa aaatcagccg ttaccgagta ttgcccgaat cacggcacat ggccgaaaaa
      841 cttcgtcatt cccgcgcagg cgggaatcta ggtctgtcgg cacggaaact tatcgggtaa
      901 aacggtttct tgagattttg cgttctagat tcccactttc gtgggaatga cgggatttaa
      961 tgatgccgcc ggcgtggcat ccgcctccga catcaaaggc aaatatgttg agaaagttga
     1021 agtcaaaaac ggcgtcgtta ccgccgaaat gaaatcaagc ggcgtaaaca aagaaatcca
     1081 aggcaaaaaa ctctccctgt gggccaagcg tcaagacggt tcggtaaaat ggttctgcgg
     1141 acagccggtt gcgcgcaacg acaaagccga caccgacaaa atcgacacca agcacctgcc
     1201 gtcaacctgc cgcgacgcag catctgccga ttaaggcaaa ttataccata aattttaaat
     1261 aaatcaagcg gtaaatgatt ttccacggcc actcggatta atccgggtgg cttccttttt
     1321 aaaggtttgc aaggcaagcg gggtcgtccg ttttggtgga aataatatat cgattgcgct
     1381 tcaaggctct gcgcgtacct cattgccgcc cgtttaaaca cggggtttat ctgacaggcg
     1441 cgtaatccgc cctctcattt accgaacaag cgaactggat tcccgcctac tcgggaatga
     1501 cgaagctatc cgtacggaaa cctgcaccgc gtcattccca cgaaagtggg
//
LOCUS       DAXHKG010000218         1535 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.218, whole genome shotgun sequence.
ACCESSION   DAXHKG010000218 DAXHKG010000000
VERSION     DAXHKG010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.218"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            182..>1535
                     /gene="pilC"
                     /locus_tag="ACFMWP_002041"
     CDS             182..>1535
                     /gene="pilC"
                     /locus_tag="ACFMWP_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC5892567.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGQAQAQTQTHKYAIVL
                     NAQKLPEVKWGSSYTSLGHKDKDLQFTHTSNFGIKKNIILSFNNTDEVVAEKKDAVVF
                     GAATYLPPYGKVSGFDDKRLTERKNAVDWIGTTKPGLVGYSYEDVTCNSSNCPEVSYK
                     TQFTFDKHQLAKKKTDNKLDIYEDKSRDNSPIYKLPDYPGLGVSFNLSGESTVKPKRL
                     SQLVSSFSEDVTQQNGANSPYKDKNLVYTTDDYRNQGNHNHQDKHHAIIFYLNAKLHL
                     LDKKQIKNIAQGKTFNLGTLKPRIDLTEAWKNRNGGFFNNGNWTFEDKGEVSVKLSLP
                     QVKAGRCVNKDNPNKNTKTSSPALTAPALWFGPVQNGKAQMYSASVSTYPDSSSSRIF
                     LQNLKRKNDPNKPGRYSLADLSASDIQSKEPTFTSRQTVIRLDGGVQQIKLSRNNDEV
                     V"
BASE COUNT          479 a          372 c          358 g          326 t
ORIGIN      
        1 ctgtcgggca tctgcagcgg tttgctaaaa aacgctttac cgtgatcagt gtgcaaagtt
       61 aaaatgggga ggtaagcttt tcaaccagca attcggcggg cgcggaatcg ggcggtttac
      121 cgaaccccgg cgttcgcggc gcgccgcccc gtcccgtgaa ggcaaactca aggaataaaa
      181 gatgaataaa acttggaaac ggcaggtttt ccgccatacc gcgctttata ccgccatatt
      241 gatgttttcc cataccggcg ggggggggca ggcgcaagcg caaacgcaaa cgcataaata
      301 cgctattgta ctgaacgcgc aaaagctgcc cgaggtaaag tgggggagtt catatacatc
      361 attggggcac aaagacaagg acctccaatt tacccatacg agtaatttcg gaatcaaaaa
      421 aaacattatt ttatcattta ataataccga tgaagttgtt gctgaaaaaa aagatgctgt
      481 cgtttttggt gcagccacct acctgccgcc ctacggcaag gtttccggtt ttgatgacaa
      541 aaggctgacc gagcgcaaaa atgccgttga ttggattggt acgaccaaac cggggctggt
      601 aggctacagc tacgaagatg tcacatgcaa cagcagcaac tgtcctgaag ttagctataa
      661 aacccaattt acctttgata aacaccagtt ggcaaaaaag aaaacagaca acaagctgga
      721 tatatacgaa gacaaaagcc gcgacaattc gcccatttac aaattgccgg attatcctgg
      781 gttgggcgtg tctttcaatt tgagcggcga gagcaccgtt aaaccaaaga gactcagtca
      841 attggtatct tcttttagcg aggacgtgac gcagcaaaat ggtgcgaaca gcccatacaa
      901 agacaaaaac ctcgtttata cgacagacga ttaccgtaat cagggtaatc ataaccatca
      961 ggacaaacac cacgccatca tcttttatct aaacgccaaa ctgcacctgc tggataaaaa
     1021 acaaatcaaa aatatcgcgc aaggcaaaac atttaatttg ggtaccttga aaccgcgcat
     1081 cgatctgacg gaagcgtgga aaaacaggaa tgggggcttt tttaataatg gtaattggac
     1141 gtttgaagat aaaggagaag tcagcgtcaa actcagcctg ccgcaagtca aagcaggccg
     1201 ctgcgtcaac aaagataacc ccaataagaa taccaaaacc tcttcccccg cactgactgc
     1261 ccccgcgctg tggttcggac ctgtgcaaaa tggtaaggcg cagatgtatt ccgcttcggt
     1321 ttctacctac cccgacagtt cgagcagccg catcttcctt caaaatctga aaagaaaaaa
     1381 cgaccccaac aaacccggcc gctattccct cgcagacttg agtgcgtcgg atattcaaag
     1441 taaagagccg actttcacaa gtcggcaaac cgtcatccga ttggatggcg gcgtacagca
     1501 gatcaaactg agtagaaaca atgatgaggt cgtca
//
LOCUS       DAXHKG010000219         1505 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.219, whole genome shotgun sequence.
ACCESSION   DAXHKG010000219 DAXHKG010000000
VERSION     DAXHKG010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.219"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            26..1363
                     /locus_tag="ACFMWP_002042"
     CDS             26..1363
                     /locus_tag="ACFMWP_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC5892568.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGQNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGIWGEFKVFGKTIFDLWDYVISAVIMPVGALGVA
                     VFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLDIL"
BASE COUNT          285 a          358 c          406 g          456 t
ORIGIN      
        1 atcttcacat ttcttaataa attttatgag taaccatact tcttggtcgt ccaaaatcgg
       61 tttcgtgctt gctgcggcag gttcggccat cggtttgggc gcgatttgga aatttcctta
      121 tacggcaggc accaacggcg gcgcggtgtt tttcctgctg tttttgatat ttaccgtctt
      181 ggtcgccctg cccgtccagc ttgccgagtt ttatatcggg cgcacaggcg gtcaaaacgc
      241 cgtcgattcc ttcagggctc tgcgtccgag tacgcaatgg ctttgggtcg ggcgcatggg
      301 cgtttccgcc tgctttattt tgctgtcgtt ttacagcgtg gtcggcggat gggtattaaa
      361 ttatgtcgtc cacagtttca cgggggcggt tcataccggc gcggactttg aagccttgtt
      421 cggcgcgacg atttccaatc cggcaggttc gctgtcctat caggcactgt ttatgctgat
      481 tacggtctgg gtggtcaaag gcggcatttc agacggcatt gaaaaggcaa accgttatct
      541 gatgccgggg ctgtttatcc tctttattgc gctggcaatc cgttcgctga cgctgccggg
      601 tgcaatggag ggcgtgtctt tcctgctcaa accgaattgg tcgtacttta aagccgatac
      661 gatgattacg gctttaggcc aggcgttttt tgccttgagc atcggcgttt ccgctatgat
      721 tacctatgct tcgtatttgg gaaaagatca ggatatgttc cgctcggggc atacgattat
      781 gtggatgaac ctcttggttt cgctgttggc aggtttggtg atttttccgg cggtgttcgc
      841 cttcggtttt gaaccgagcc aggggccggg attgattttt atcgtattgc cggcagtgtt
      901 tatgaagatg ccgttcggta cggttttgtt tgcggtattt atgctgctgg tcgttttcgc
      961 cacgctgact tcggcgtttt cgatgttgga aacggtcatt gcctcaacca tccgccaaga
     1021 cgagcgcaaa cgcaaaaaac acacttggct tatcggcacg gctattttca ttgtcggcat
     1081 cccgtccgcg ctgtctttcg gcatctgggg tgagtttaag gttttcggca aaaccatttt
     1141 tgatttgtgg gactatgtta tttccgccgt cattatgcct gtcggcgcgt tgggcgttgc
     1201 cgtatttacc gcctggattc aggacaagca gtctgtgtta aaagatgccg gcgcgggcag
     1261 caccgtacca cgggcagtgc tgctgctgtg gctgaatacc ttgcgctacc tcgccccgat
     1321 tgccattatt attgttttcg tcaattcttt ggacatcctt taaaagccat ccaaacagca
     1381 aaaatgccgt ctgaaagcct ttcagacggc atttttgctt caggttcagc ctatttcgtt
     1441 caaagtatag tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacaaat
     1501 agtac
//
LOCUS       DAXHKG010000220         1455 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.220, whole genome shotgun sequence.
ACCESSION   DAXHKG010000220 DAXHKG010000000
VERSION     DAXHKG010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1455)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.220"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(127..1374)
                     /locus_tag="ACFMWP_002043"
     CDS             complement(127..1374)
                     /locus_tag="ACFMWP_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC5892569.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPAGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKAAAVK
                     SRPAVPVAAQPPVQSAPVDINAATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNML
                     SIGQIVKVKPAGYAAPKTSAVESRPAVPAAVQTPVKPAAQPPVQSAPQPAAPAAENKA
                     VPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGVDIAGNAGQPVLAAAD
                     GKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDAS
                     RTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          324 a          386 c          419 g          326 t
ORIGIN      
        1 aaacacagtc aaacaaattt atatgcccca tcccttccga ataatttgaa aacacagccg
       61 ccaaaaacaa aaatgccgtc tgaaaacctt tcagacggca tttccaattt gatttcaggc
      121 agaaagtcag aacgcgatat agctgttcgg gttaaccggt ttgccgtttt gccgcacctc
      181 gaaatgaagc tgcgttctgg aagcgtcggt attgcccatc aaagcgacct gctgcccgcg
      241 tttgacctgc tggccttcgc cgaccagcaa tttttggttg tgcccgtatg cggtcaggaa
      301 ggaagaatta tgctggatga tgaccagatt gccgtatccc ctcaaaccgg aacctgcata
      361 aaccactttg ccgtcagccg ccgccaaaac gggttgtccc gcatttcctg caatatcgac
      421 acccttgttg ttgccgccga aatcggcaac cactttacct tgcgtcggac gctgccaaac
      481 aatgccgccg accgaacgcg ttccggaagg cgaagcggca ggagattgcg gggcgggcgc
      541 gggaaccgct ttattttccg cagcgggcgc ggcaggttgc ggcgcggact gcacaggcgg
      601 ttgcgcggcg ggtttcacag gggtttgcac ggcagccggt acggcgggcc tgctttctac
      661 ggctgaggtt ttcggtgcgg catatcctgc cggtttgact ttaacaatct gaccgatgct
      721 caacatattg tcggtcatgc cgttccacgc acggaaatcg tcttgagaga tatggtagcg
      781 tttggaaatg ttgtacaccg tgtcgccgcg cacaatagta tgcgtcgccg cgttgatgtc
      841 gacgggtgcg gactgtacgg gcggttgcgc ggcaaccggt acggcgggcc tgctttttac
      901 ggctgcggct ttcggtgcgg catatcctgc cggtttgact ttaacaatct gaccgatgct
      961 caacgtattg tcggtcatgc cgttccacgc acggaaatcg tcttgagaga tatggtagcg
     1021 tttggaaatg ttgtacaccg tgtcgccgcg cacaatagta tgcgtcgccg cgttgatgtc
     1081 gacgggtgcg taagaaggaa cgtatgtacc cgaaacggca ggtgcagacg gcggaacata
     1141 agcaggaggc gtataaaccg gcgcgctttg caccggcggc acataaggcg catcgccggc
     1201 aggagccggg ctgtacggcg ttgctccata ggggttgttg taaactgccg aagacggcgc
     1261 gtcctgcata cctgaattgc ctgcaatgac aggagcaggc tgttgggtgg cgcaaccgcc
     1321 caacagtgcg gcaaaggagg cgcaagccgc caaaagtgtc gtttgtttca acataagata
     1381 accttcatgt tccgatatat agcctgaatg cggtatatca taataaaaat gcgcgttctt
     1441 ctcaagcgca aagcc
//
LOCUS       DAXHKG010000221         1450 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.221, whole genome shotgun sequence.
ACCESSION   DAXHKG010000221 DAXHKG010000000
VERSION     DAXHKG010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.221"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(111..767)
                     /locus_tag="ACFMWP_002044"
     CDS             complement(111..767)
                     /locus_tag="ACFMWP_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HFC5892570.1"
                     /translation="MKNKSKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALVAAAILLLS
                     "
     gene            832..>1450
                     /locus_tag="ACFMWP_002045"
     CDS             832..>1450
                     /locus_tag="ACFMWP_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFC5892571.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMRGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMVGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIRAIFGATVVLKGHKT"
BASE COUNT          325 a          344 c          472 g          309 t
ORIGIN      
        1 ttgggacgga aaaacggcct gaagccgttt cgggcattca gaccgtttgc gcggagaggg
       61 gatgccgtcc gaagggcgaa aagggcttca gacggcattg atgtcgggtt tcaggacagg
      121 agcaggatgg cggctgcgac aagcgcggca accgataatg cggcggcaag cgcggttttg
      181 ccggcaaagc ggattgaggt tttgccttcg atgtatttga agccggttat catcgggagg
      241 acgaggtttt tctttttgaa cacgcggtat gcggcgacgg cggcgatatg aatggcggaa
      301 aaaacggcga gcagcttgaa aaagttgagg tggattttcc gcataaggct gcccgtatgc
      361 tcggaaacca aatggttgag gtagccgttg gtgctgaagg tgttttcatc ggcggcaaaa
      421 agccctgtgc cgacttgaaa tgagacggcg gccaaaagcg cgacgaccat cagtgcgccc
      481 aaggggttgt gtccgggttg gacgtgttcg ggaataccgt ttttcatata ctctctgata
      541 cccgaccatc cgcggacgaa acgggagaaa cgggcggtat cgctgcccca aatgccccag
      601 cagaggcgga atacgagcag gaaaaggata aacagcccga cgcgcgtgtg ccattgcagc
      661 atatcgccgc cggttttcgc gctataccac ataaagggta gggatgcggc aagcagccag
      721 tggaaaaggc gggtggggaa gtcccagact ttgcttttgt ttttcataat cggtttccgg
      781 cggtagaatc ggtttgtttt cgagccttaa ttttaaccga ttggagggga aatgtttccc
      841 gttttccatc tttcaggcga aagccgccgc cggatgcttc aggcggcatc gcgttttccc
      901 tatgttttca aagcccgtgc ggaagattcg cacaaaggga ctttcggcac gctcgccgta
      961 gtcggcggat cggcagggat gagaggcgcg cccgtattgg cggcatcggc ggcgatgtat
     1021 ctcggctgcg gcaaggtgtg ggcgggtttc aatcaggatg cgcttccgtt tgccgtcatt
     1081 gccggttttc ccgaaattat gttggacacg gcagacggtt tgaccaagcg tcaaggcata
     1141 aacgcttgga tggtaggttg cggcctgggt acggataaag cggcggtcgg aacgcttgcc
     1201 ggaattttgg cggaacacac ggacaagccc gtccttttgg atgcggacgc gctgaacata
     1261 ttatcaaccg atgccgaaac ccgaaatctg gcgcgcgggt gtaaaaacct gattttaacg
     1321 ccacaccccg ccgaagccgc gcgcctgctt ggaacgacgg ttgcacaggt tcaggcggat
     1381 cggacggcgg cagtgaggaa gataagggca attttcggcg caaccgtggt tttaaagggg
     1441 cacaaaacat
//
LOCUS       DAXHKG010000222         1403 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.222, whole genome shotgun sequence.
ACCESSION   DAXHKG010000222 DAXHKG010000000
VERSION     DAXHKG010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.222"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(73..996)
                     /gene="lpxC"
                     /locus_tag="ACFMWP_002046"
     CDS             complement(73..996)
                     /gene="lpxC"
                     /locus_tag="ACFMWP_002046"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HFC5892572.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPAFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRNCG"
BASE COUNT          375 a          335 c          347 g          346 t
ORIGIN      
        1 ttttggtttt ctgtttttgt aggaatgatg aaaatttaag ttttaggaat ttaccggaaa
       61 aaacagaaag cgttatccac aatttctgat gttcagctcg tgaaatgcgt cgggcaaatc
      121 atcgctgtcg gcaaattcca cccggtcgta agccgtttcg tctgccaaaa ccgcgcgcaa
      181 gagtgcgttg ttgatggcgt gtcccgattt gtagccttca aacgcgccga caatcggatg
      241 tccgacgata tacaaatcac cgatggcatc aaggattttg tggcgcacaa actcatcggg
      301 atagcgcaag ccttcaggat tcaggacatc cgtgtcgtca atcacgatgg cgttgttcaa
      361 attgccgccc aaacccagat tgtgggcgcg catcatttcc acttcgtgca taaagccgaa
      421 ggtgcgcgcg cgcgcgattt cgtcgatgta ggatttgccg gcgaaatcga tttcaaaagt
      481 gggcgagctg cggttgaaag ccggatggtc gaattcgatg gtcagcgtta ccttaaagcc
      541 gtcatacggc gtaaagcgca cccatttgcc cgcttctttg atttcgacag gcttgaggat
      601 tttcaaaaaa cgcttttgcg ccttttgatc gaccacgccc gcatcttgca aaaggtaaat
      661 aaacggcagg ctggagccgt ccataatcgg gatttcgggt gcgttcagct caatcagcgc
      721 gttgtcgata ccgtaggcgg acagcgcgga cataatgtgt tcgatcgtgc cgacgcgcac
      781 gcctttgtcg gtaacgatgg tggaggaaag gcgggtatcg ttgatcaaat aaggggtcag
      841 cttgatttgt tcgcccatct cgccgtccaa atcggtacgg cggaaggaaa tcccgctgtt
      901 ttcaggcgcg gggtgcaggg tcagtgcgac ccgttcgccg gaatgcaggc cgactccggt
      961 aacgctgatg gatttcgcca aagttctttg cagcataaac cgcttcctta tcaatggggt
     1021 aagttgggga atgatacgat aaaaccggaa aaacaagcta tgtttttcca tagtatttgc
     1081 caatgtatcc gttttcaata cgtaagctgc ataaaaatgt atagtggatt aacaaaaatc
     1141 aagacaaggc gacgaacccg cctccctcct gaaaaacgca aaaaatgccg tccgaaaacc
     1201 tttcggacgg cattttcgcg tgaaccgtca ttcccacaag gacataaaac caaaacagaa
     1261 aaccaaaaac agaaacctaa aattcgtcat tcccacgaaa gtgggaatct agttcgttga
     1321 gtttcagtta tttagaataa attttgaaac ttaaatcccg tcattcccac gaacctacat
     1381 tccgtcattc ccacgaaagt ggg
//
LOCUS       DAXHKG010000223         1402 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.223, whole genome shotgun sequence.
ACCESSION   DAXHKG010000223 DAXHKG010000000
VERSION     DAXHKG010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.223"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>1402
                     /locus_tag="ACFMWP_002047"
     CDS             <1..>1402
                     /locus_tag="ACFMWP_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HFC5892573.1"
                     /translation="PGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQTAKNVDWKQVQ
                     LAYDKWDYKQEGLTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATTTAAAT
                     TTVSTAAAMQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSALTAGAL
                     NQMGADIAQLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNGGSLKD
                     NLGNAALGALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGA
                     AVGEIVAESILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAAEVAVV
                     NNALNFDSTPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIWISNIR
                     NGITGPIVITSYGVYAAGWTAPLIGTAGKAAISTCMANPSGCTVMVTQAAEAGAGIAT
                     GAVTVGNAWEAPVGALS"
BASE COUNT          398 a          339 c          382 g          283 t
ORIGIN      
        1 ctcccggcgg ctatatcgtc gacattccga aaggcaatct gaaaaccgaa atcgaaaagc
       61 tggccaaaca gcccgaatac gcctacctga aacagcttca gacggccaag aacgtcgatt
      121 ggaaacaggt gcagctggcc tacgacaaat gggactataa acaggaaggc ttgaccggag
      181 ccggtgcagc gattgtggtg attattgtaa ccgctctaac ttatggatac ggagcggctg
      241 cagcgggtag cgtaactgcc gcaggaagta gtacagccgc agctgcaaca acgacagcgg
      301 cagcaactac cactgtttct actgcagctg ccatgcaaac cgcagcttta gcctccttgt
      361 atagccaagc agctgtagcc atcatcaata ataaaggcga tgtaggcaaa gcattaaaag
      421 atctcggcac cagtgatacg gtcaagcaga ttgttacttc cgcactgacg gcgggtgcat
      481 taaaccagat gggagcagat attgcccaat tgaacagcaa ggtaagaacc gaactgttca
      541 gcagtacggg caatcaaacc attgccaacc ttggaggcag attggccacc aacctcagca
      601 atgcaggtat ctcagctggt atcaataccg ccgttaacgg cggcagcttg aaagacaact
      661 taggcaatgc cgcattggga gcattggtta atagcttcca aggggaagcc gccagcaaaa
      721 tcaaaacaac cttcagcgac gattatgttg ccaaacagtt cgcccacgct ttggcgggtt
      781 gtgttagcgg actggtacag ggaaaatgta aagatggggc aattggcgca gcagttgggg
      841 aaatcgtagc tgaatccata cttggcggca gaaaccctgc tacactcagc gatgcagaaa
      901 agcataaagt tatcagttac tcgaagatta ttgcgggcag cgtggcggca ctcaacggcg
      961 gcgatgtgaa tactgcggcg aatgcggctg aggtagctgt ggtgaataat gctttgaatt
     1021 ttgacagcac ccctaccaat gcgaaaaagc atcaaccgca gaagcccgac aaaaccgcac
     1081 tggaaaaaat catccaaagt attatgcctg cacatgcggc aggtgcgatg actaatccgc
     1141 aggataagga tgctgccatt tggataagca atatccgtaa tggcatcaca ggcccgattg
     1201 tgattaccag ctatggagtt tatgcagcag gttggacagc tccgctgatc ggtacagctg
     1261 gtaaagcagc tatcagcacc tgtatggcta atccttctgg ttgtactgtc atggttacgc
     1321 aggctgctga agcgggcgcg ggaatcgcca cgggtgcggt aacggtaggc aacgcttggg
     1381 aagctccagt aggagcgttg tc
//
LOCUS       DAXHKG010000224         1354 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.224, whole genome shotgun sequence.
ACCESSION   DAXHKG010000224 DAXHKG010000000
VERSION     DAXHKG010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.224"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..435
                     /locus_tag="ACFMWP_002048"
     CDS             <1..435
                     /locus_tag="ACFMWP_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC5892574.1"
                     /translation="IIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKID
                     AIRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKEL
                     SDIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
     gene            465..1343
                     /locus_tag="ACFMWP_002049"
     CDS             465..1343
                     /locus_tag="ACFMWP_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HFC5892575.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEALDLPEGSVILGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
BASE COUNT          366 a          345 c          362 g          281 t
ORIGIN      
        1 attatcgaaa acagggcgga ctattaccgc ctgcttttag gcgtaaccga acggcaggac
       61 tgggaaagct ggataatcta catcttagac ggcgtagccg acaccgccga ttggacggta
      121 gcgaaaatag atgcgatacg ccgcctgttt gagcagacac gtcaacacat acggacacac
      181 gcacaaggaa tctacacgca cgaactggta aatcttctgt ttgagcagcc atatacacgc
      241 attgccaacc tagaagcggc agggatagcc aaacggcaga cggcctctaa gtacctgaaa
      301 gagctttcag acataggtgt gctgcaagaa atcgccatcg gcagggacaa actattcatt
      361 catccgcgcc taatggaact attgcgggga gagggcaaca gctttacctc attccaatcc
      421 ctcgttaaag catagccaaa ataatcaata atccggaggt caatatggca agaaggtcaa
      481 aaacatttga agaagctgct gctgaggttg aggaacgttt cggtcatcgt ggcattaagt
      541 tggtcgagtt tgagggtaca gccaagccgt gtgtaatcaa ctgccctaaa catggaaacc
      601 aaacctgttc gaggtactcc aatatgttca taggaagtag ctggggttgc ccctcttgtg
      661 gtaatgagca agctgcaaaa gccggtatag cgacccttag gaagaatcac atagcgttag
      721 aaatgctgaa acaggctgta acaggtatga ccaagcaaga gcgcatcacg acgcaagcct
      781 acaatgagat gaccaaatcc gtggcaggtt caaacagcat agtccttaac gatgtccaag
      841 gcgatacgac catcaacaac catcatacgc atacgcacaa ccacagcgat gccgacggca
      901 aagcactgtc gatgaggctc acaccacgcc ccctgttgtc agaccgtcag gcggcggctt
      961 tcgcccgtac aggcaaactc acaggcagtt tcgacttgtt tgcttcggtg gtcgccccct
     1021 cgcagtacac gtttgccgtt gccatgcccg acacgtccat gtcgccggtt atcgaaaagg
     1081 gggatttgct ggtggtcgag ccgcgtatgc gccctgcgga cgaagacatc gtactgattg
     1141 aactgtccga caagcggctg gtcgtcgcgc accttgttat cgatattgcg ggcaggatgc
     1201 tgatttatca gacgggcagg ccgtctgaag ccctcgacct gcccgaaggc agcgtgattt
     1261 taggtgtggt gctggaggtc aaaaaacggt ttatgtccgc cgcacaggca agaaggcgtg
     1321 ttgattcgga ttaccgcccc tgatgtgtgg acgg
//
LOCUS       DAXHKG010000225         1349 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.225, whole genome shotgun sequence.
ACCESSION   DAXHKG010000225 DAXHKG010000000
VERSION     DAXHKG010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.225"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..967
                     /locus_tag="ACFMWP_002050"
     CDS             <1..967
                     /locus_tag="ACFMWP_002050"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC5892576.1"
                     /translation="AKVAKVAKVAKVAKVAKVAKVAKVAATAQKEAAPAQQQGGIRFS
                     DGIAAVADNEVITRRRLAEAVSEAKANLPKDAQISESELSRQVLMQLVNQSLIVQAGK
                     RRNIQASEAEIDAVVAKNPALKNLSPAQRRDFADNIIAEKVRQQAVMQNSRVSEAEID
                     AFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRKIYGEARSGTDFS
                     SLARQYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPVRTQFGWHIIKLN
                     EVRDAGTPQERIRNSVRQYIFQQKAEQATVNLLRDLHSGAYVDIR"
     gene            1153..>1349
                     /locus_tag="ACFMWP_002051"
     CDS             1153..>1349
                     /locus_tag="ACFMWP_002051"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892577.1"
                     /translation="MTGFWVVVIYRKNKKTYAVIPEQAGIRLFKTAEIYPKQQQSFHR
                     HSRVGGNLATKSNRNLSGKQKP"
BASE COUNT          374 a          391 c          343 g          241 t
ORIGIN      
        1 tgccaaagtt gccaaagttg ccaaagttgc caaagttgcc aaagttgcca aagttgccaa
       61 agttgccaaa gttgccgcca cggcgcaaaa agaagccgca cccgcacaac agcagggcgg
      121 tatccgcttt tcagacggca ttgccgccgt tgccgacaac gaagtcatca cgcgccgccg
      181 gcttgccgaa gccgtttccg aagccaaagc caacctgccc aaagacgcgc agataagcga
      241 atccgagctg tcccgacagg tgctgatgca gcttgtcaac caatccctga ttgtacaggc
      301 gggcaaacgc cgcaacattc aagcaagcga agcggaaatc gatgccgtcg tcgcaaaaaa
      361 tcccgccctc aaaaacctca gccccgccca acgccgcgat tttgccgaca acatcattgc
      421 cgaaaaagtc cgccagcagg cagtgatgca gaacagccgc gtgagcgaag ctgaaatcga
      481 tgccttcctc gagcaggcgc aaaaacaagg catcaccctg cccgaaggcg caccgttgcg
      541 ccaataccgc gcccaacaca tcctgattaa agctgacagc gaaaacgccg ccgtcggcgc
      601 ggaaagcacc atccgcaaaa tctacggaga ggcccgcagc ggcacagact tttccagcct
      661 ggcgcgccaa tattcgcaag acgcgagcgc gggcaacggc ggagatttgg gctggtttgc
      721 cgacggcgtg atggttcccg cctttgaaga agccgtccac gcgctcaaac ccggacaggt
      781 cggcgcgccc gtccgcaccc aattcggctg gcatatcatc aaattgaacg aagtgcgcga
      841 tgccggcaca cctcaggaac gtatccgcaa ttccgtgcgg caatacatct tccaacaaaa
      901 agccgaacag gcaaccgtca acctgttgcg tgacctgcat tccggcgcgt atgtcgacat
      961 ccgctaaggc ggtttgaagc aaaaagccat accgatcggc aaaaatccgg gcggtatggc
     1021 tttttggatt tcgagttact tttacaccgt cattcatcat tcccgcgaaa gcgggaatct
     1081 agaaacgaaa agtaacagga atttatcggg aatggctgga atttaaaggt ctggattccc
     1141 gctttcgcgg gaatgacggg attttgggtt gtggtaattt atcggaaaaa caaaaaaacc
     1201 tatgccgtca ttcccgagca ggcgggaatc cggttattta aaactgcaga aatttatccg
     1261 aagcaacaac aatctttcca tcgtcattcc cgcgtaggcg ggaatctagc aacgaaaagt
     1321 aacaggaatt tatcgggaaa acagaaacc
//
LOCUS       DAXHKG010000226         1290 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.226, whole genome shotgun sequence.
ACCESSION   DAXHKG010000226 DAXHKG010000000
VERSION     DAXHKG010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.226"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            166..1278
                     /gene="nadA"
                     /locus_tag="ACFMWP_002052"
     CDS             166..1278
                     /gene="nadA"
                     /locus_tag="ACFMWP_002052"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HFC5892578.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEADTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYICRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
BASE COUNT          299 a          333 c          387 g          271 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaatttgag cataatataa aaatatttca aaatataaac
      121 ggcaaatctt tatgccgtct gaaaaaccag ccataaggaa gtctcatgca aaccgccgcc
      181 cgccgctcgt tcgattacga tatgcccctc attcaaacgc cgacttccgc ctgccaaatc
      241 cgtcaggcgt gggcgaaggt tgccgacacg cccgaccgcg aaacggcagg ccgtctgaaa
      301 gacgaaatca aggctttgct gaaggagaaa aacgcggtct tggtggcgca ttattatgtt
      361 gatccgctga ttcaggattt ggctttggaa acgggcggat gcgtgggcga ttcgctggaa
      421 atggcgcgct ttggtgcgga acacgaagcc gatacattag tggtggcggg cgtgcgtttc
      481 atgggcgaga gcgcgaaaat cctctgccct gaaaaaacag tgctgatgcc tgatttggag
      541 gcggaatgtt ctttggattt gggttgcccg gaagaggcgt tttcggcgtt ttgcgaccaa
      601 caccccgacc gcacggtggt ggtgtacgcc aacacttccg ccgccgtgaa agcgcgtgcc
      661 gactgggtgg taacgtcttc agtggcgttg gaaatcgtgt cgtatctgaa atcgcgcggc
      721 gagaagctga tttggggacc cgaccgccac ctcggcgact acatctgccg cgaaacgggc
      781 gcggatatgc tgttgtggca gggttcgtgc atcgtccaca acgaatttaa agggcaggag
      841 ctggcggcgt tgaaagcgga acatcccgac gcggtggtgc tggttcatcc tgaatcgccg
      901 caaagcgtca tcgaactggg cgacgtggtc ggctcgacca gcaaactgct caaggccgcc
      961 gtatcgcgtc ctgaaaaaaa attcatcgtg gcgaccgatt tgggcatcct gcacgaaatg
     1021 caaaagcagg cgcccgacaa agaatttatc gccgcgccga cggcgggcaa cggtggaagc
     1081 tgtaaaagct gcgcgttctg cccgtggatg gcgatgaatt cgctgggcgg catcaaatac
     1141 gccctgacaa gcggacgtaa cgaaatcctg ttggacagga agctgggcga agccgccaaa
     1201 ctgcctttgc agcgtatgct cgacttcgcg gcaggactca aacgcgggga tgtgttcaac
     1261 ggcatgggtc ccgcctgatt tgccgtccat
//
LOCUS       DAXHKG010000227         1254 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.227, whole genome shotgun sequence.
ACCESSION   DAXHKG010000227 DAXHKG010000000
VERSION     DAXHKG010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.227"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            237..1190
                     /locus_tag="ACFMWP_002053"
     CDS             237..1190
                     /locus_tag="ACFMWP_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HFC5892579.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPASFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSPGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNPESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT          200 a          273 c          432 g          349 t
ORIGIN      
        1 caaaccggat gattcgggct aaataattcc tgattctttg gatatagcca acggtatgcc
       61 tgccgatgcc gtcagaaagg gcttgatggg cgtttgcggt tcgggttaat atttgtgctg
      121 tatctgttaa ttccggttag taaaatgggg cggggacgat gagtggccgt cggtcggttt
      181 tgcacgggcg gtaataatgt ccggcgcaag gtgcgccgtt tcgggagggg tgtgtgatgg
      241 gttttctgat tggtttgagc cgcaacctga cgcggtttac ggctttggtc attttgcttg
      301 cgtcggcggt tgcgtttatc ggaccggctt cgtttgcgtg ggttaagggc gatgttcagg
      361 tcttggtgct gggcatcatt atgctgggta tggggatgac tttgggcagg gaggactacc
      421 ggattttggc gcagcgtcct ttggatgtgt ttatcggtgc ggcggcgcaa tataccgtga
      481 tgccgttgct cgccatcggt attgccaagc tgttcgacct ttcgccgggg ctgactttgg
      541 ggctggtgtt ggtggggacg tgtccgggcg gcgtgtcgtc caacattatg agtttccttg
      601 ccaaaggcga tgtggcgttt tcagtcggta tgacgacggt gtctacggtg ctggctccgg
      661 ccgttacgcc tttgtggatg acctgcctgg tcggtcagac ggtggatatg gacggttggg
      721 ggatgttccg gtttatgctg ctggtcacgc ttttgccggt ggtgctgggt tcggcggcaa
      781 atatcctgct gcacggaaaa cattggtttg aaaatgtccg tgccgttatg ccgggcgtgg
      841 cggtattggc atttgcctgc attgtcggcg gcgtggcttc ggttcacgga caccgttttg
      901 ccgaatcggc gttggtaatg gtgttggcga ttgcggtaca caatatcgcc ggctatgtgt
      961 caggctatta cgccgccgcg ctgtttggta tggatacggc aaaaaaacgc accttggcaa
     1021 tcgaagtcgg cgtgcagaat gccggtttgg caacaggatt gagcgcgaaa tttttcccag
     1081 gcaaccccga atcggcggtt gcggcggcgg tcgcctgcgt gtggcattcg gtttcgggga
     1141 cggtattggg caacttgttc gctctgtggg acaagcgtcg ggacgcttag tcgggcgtgt
     1201 ccgaaccgtc ccacgatata tagtggatta actttaaacc ggtacggcgt tgcc
//
LOCUS       DAXHKG010000228         1233 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.228, whole genome shotgun sequence.
ACCESSION   DAXHKG010000228 DAXHKG010000000
VERSION     DAXHKG010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.228"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>1233
                     /locus_tag="ACFMWP_002054"
     CDS             <1..>1233
                     /locus_tag="ACFMWP_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892580.1"
                     /translation="GAELFGDNTKLADGSFAKHGYAALAELDSNGDNIINAADAAFQT
                     LRVWQDLNQDGISQANELRTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTNGT
                     TAKMGDLLLAADNLHSRFKDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLK
                     AYSAAETKEAQLALLDNLIHKWAETDSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQ
                     LKKNALVSLSDKAKAAIDAARDRIAVLDAYTGQDSNTLYYMSEEDALNIVKVTNDTYD
                     HLAKNIYQNLLFQTRLQPYLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDL
                     AEMLAYGELRSWYEGRRLMADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDI
                     LQNVGFGHNKNVSLYGNDG"
BASE COUNT          378 a          280 c          280 g          295 t
ORIGIN      
        1 cggtgcggaa ctcttcggcg acaacaccaa actggcagac ggctcttttg ccaaacacgg
       61 ctacgcggct ttggccgaat tggattcaaa cggcgacaac atcatcaacg cggcagacgc
      121 cgcattccaa accctgcgtg tatggcagga tctcaaccag gacggcattt cccaagctaa
      181 tgaattgcgt acccttgaag aattgggtat tcaatctttg gatctcgcct ataaagatgt
      241 aaataaaaat ctcggtaacg gtaacacttt ggctcagcaa ggtagctata ccaaaacaaa
      301 cggtacaacc gcaaaaatgg gggatttact tttagcagcc gacaacctgc acagccgttt
      361 taaagataaa gtggaactca ctgccgaaca ggcaaaagcc gccaatcttg cgggcattgg
      421 tcgtctgcgc gatttgcgcg aagctgccgc attgtccggc gatttggcca atatgctgaa
      481 agcttattct gccgccgaaa ctaaagaagc acagttggca ttgttagata atttgattca
      541 caaatgggcg gaaaccgatt cgaactgggg caaaaaatcg ccaatgcgac tttcaaccga
      601 ttggacgcaa acggctaatg aaggtattgc actgacacca tcccaagtag cacaactaaa
      661 aaagaacgct ttagtttccc tttctgataa agctaaagca gctattgacg ccgcccgcga
      721 ccgcattgcc gtgcttgatg cctacacggg gcaggattcc aacacactct attacatgag
      781 cgaggaagat gcgcttaata tcgtcaaagt aaccaacgat acatacgacc atctcgccaa
      841 aaacatctac caaaacctgt tgttccaaac ccgtttgcag ccatatttga atcaaatcag
      901 tttcaaaatg gaaaatgata cgttcacttt ggattttagt ggtcttgttc aagcatttaa
      961 ccatgtcaaa gaaactaatc cgcaaaaagc ttttgtggat ttggccgaga tgcttgcata
     1021 tggcgaactt cgttcttggt atgaaggccg aagactaatg gccgattatg tggaggaggc
     1081 aaaaaaagca ggtaaatttg aagattacca gaaagtgttg ggtcaggaga ccgttgcatt
     1141 attagctaaa acatcgggta cgcaagcaga tgatatcctg caaaatgtag gctttggtca
     1201 taataaaaat gtttctttat atggtaatga cgg
//
LOCUS       DAXHKG010000229         1217 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.229, whole genome shotgun sequence.
ACCESSION   DAXHKG010000229 DAXHKG010000000
VERSION     DAXHKG010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.229"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(159..596)
                     /gene="rnhA"
                     /locus_tag="ACFMWP_002055"
     CDS             complement(159..596)
                     /gene="rnhA"
                     /locus_tag="ACFMWP_002055"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HFC5892581.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDTLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            709..1098
                     /locus_tag="ACFMWP_002056"
                     /pseudo
     CDS             709..1098
                     /locus_tag="ACFMWP_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
BASE COUNT          230 a          295 c          370 g          322 t
ORIGIN      
        1 tgcgcgggaa tgacggtgga gcggtttcag ttgtttctaa ataaattttt gcagcgttgg
       61 gtttttagat tcccgcctgc gcgggaatga cggtggagga cgatgccgtc tgaatcccat
      121 tagcggtttc agacggcatt ttcttgtcgg tgcgacagtc aggaaaactg cgctgcgcca
      181 cggtttgcca aatcgtcggc gcgttcgttt tccgcgtgtc ccgcgtgtcc tttaacccaa
      241 gtccaactga cttggtgctg cccgaccaga gtgtcgagtt ctttccataa atcgtcgttt
      301 ttgacgggct gtttggcggc ggttttccag ccgttgcgct tccaaccgtg tatccagttt
      361 tccatgccgt ttttgacgta ttgcgagtcg gtgcagatga tgacggtgca gcggcgtttg
      421 agcgatttca gtccttcgat gacggcggtc agctccatgc ggttgttggt ggtttgcgct
      481 tcgccgccga aaagttcttt ttcgtggctg ccgtagcgca tcaacacgcc ccagccgccc
      541 gcgccgggat tgcctttgca cgcgccgtcg gtgtaaaggt aaacgggtgt gtccatattg
      601 tgcctttgtg tggtgtccgg cgtgattata agcggtttgc gcgccgtgcc gtctgaaaga
      661 ttgcggcgga ttgaaatagg catataatgt gcaactttat ttttgaatat gaaagagcgg
      721 atagtgggtc aaagcggcga gttgttttgt ttcgggcaaa tgcccgtatg gaaggcggaa
      781 aacctgccgg aagttttgtt gtcgggctat tcgtccgagg aaggggaatg ggtctgcctg
      841 aatgtgttgc agggcgatgt cgaagtccgc acgcaggacg gggcggcgga ggtttggtcg
      901 gcagaaagcg gcgattgcgt gtttgcgccg cagcaggtgt tttcggtcaa actgaaaacg
      961 gacgatgccg aaatccgttt gtcgctgtat tgcgcggcgg cagactattt tcacaaaaaa
     1021 tacgggatga gtgccacgca ttctgcggtc gcggcggcac gggataccgt accggcgggc
     1081 agggcgttgg atatgggttg agacctttgc aaaattcctt tccctcccga cagccgaaac
     1141 ccaaacacag gttttcagct gttttcgccc caaataccgc ctaattttac ccaaataccc
     1201 ccttaatcct gcccaga
//
LOCUS       DAXHKG010000230         1209 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.230, whole genome shotgun sequence.
ACCESSION   DAXHKG010000230 DAXHKG010000000
VERSION     DAXHKG010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.230"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..831
                     /gene="cobA"
                     /locus_tag="ACFMWP_002057"
     CDS             <1..831
                     /gene="cobA"
                     /locus_tag="ACFMWP_002057"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HFC5892582.1"
                     /translation="EQNYQGGFVSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSD
                     GILSLVRRDAERIFVGKRARGGRTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGG
                     EELETLARHQIPFSVVPGITAAVGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEW
                     QTLARSRQTLVIYMGALKAALIAERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANL
                     SELAETAPNPALIVIGEVVGLHEKLAWFGENAKKESNPAEHAYFALDGLGTGQEQQAA
                     "
     gene            847..>1209
                     /locus_tag="ACFMWP_002058"
     CDS             847..>1209
                     /locus_tag="ACFMWP_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HFC5892583.1"
                     /translation="MKIFKPALWKIPPIENGSETALAEKTETLKQRLHRIAGSHRDAR
                     FASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRFQP
                     IREDALHYVESKGRFAFYD"
BASE COUNT          289 a          345 c          347 g          228 t
ORIGIN      
        1 gaacaaaatt atcaaggcgg ttttgtgtct ttggtcggtg cgggtcccgg cgatgcgggg
       61 ctgctgacgc tcaaagggct gcaggaaatc cagcaggcag acgtggtgct ttacgacgcg
      121 ctggtttcag acggcatact gtccctcgtc cgccgcgatg cggaacggat ttttgtcggc
      181 aagcgcgccc ggggcggccg caccccgcaa gaggacacca atgcgcttat ggtcaggctg
      241 gcccgcgaag gcaggcgcgt ggtgcgttta aaaggcggag accctttcgt gttcggacgc
      301 ggcggcgaag aattggaaac cttggcacgc catcagatcc cgttttcggt cgtccccggc
      361 attaccgccg ccgtcggcgc gaccgcctat gccggcatcc cgctcacgca ccgcgattat
      421 gcccaaagtg cggttttcgt aaccggccac cgcaaggcgg atgcgcccga catcgaatgg
      481 cagaccctcg cccgcagccg ccagaccttg gtgatttata tgggtgcgct caaagccgcc
      541 ctgattgccg aacggctgca acagcacgga cgctcgcccg acacgccggc agccgttatc
      601 agccaaggca cgctgccggc tcaaaaaacc gcaaccggca cgctcgccaa cctttccgaa
      661 ctcgccgaaa ccgcgccgaa tccggcattg attgtcatag gcgaagtggt ggggctgcac
      721 gaaaaactgg cttggttcgg cgaaaacgcc aaaaaagaaa gcaatccggc cgaacacgcg
      781 tattttgcat tggacggact gggcaccgga caagaacaac aagccgcata aagcaaggcg
      841 gacaaaatga aaattttcaa acctgcttta tggaaaattc cgccgattga aaatggcagt
      901 gaaacggctt tggcggaaaa aacggaaacc ctcaaacaac gcctgcaccg gattgccggc
      961 agccaccggg atgcacggtt tgccagcagc cttgctgcgg aagatatggt aattaccgac
     1021 cttatcgccg gagaaaacct caatatcggt atttttactt tggatacggg gctgctgcac
     1081 gcggaaactt taaacctgtt ggataggatt gaacgtgttt atccgcatat gcaaatcaag
     1141 cgtttccaac cgatacggga agatgccctg cattatgtgg aaagcaaagg caggtttgcc
     1201 ttttacgac
//
LOCUS       DAXHKG010000231         1191 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.231, whole genome shotgun sequence.
ACCESSION   DAXHKG010000231 DAXHKG010000000
VERSION     DAXHKG010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.231"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            275..543
                     /locus_tag="ACFMWP_002059"
                     /pseudo
     CDS             275..543
                     /locus_tag="ACFMWP_002059"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
     gene            complement(633..1082)
                     /locus_tag="ACFMWP_002060"
     CDS             complement(633..1082)
                     /locus_tag="ACFMWP_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC5892584.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYIEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          400 a          259 c          173 g          359 t
ORIGIN      
        1 ttatgtctaa aggtgcaaac atgccttaaa ttaccatagt ggattaaatt taaatcagga
       61 caaggcgagg caacgctgta ctggtttaaa tttaatccac tatatattgc ataggcaaaa
      121 tacaagccta taacgaattg gaaacaaaat gccgtctgaa aacatcttca gacggcatta
      181 taaaatctgt tcaccttttc agatgagtaa tgtacaccct tatacaattt ttgctactat
      241 gccccataaa tccacggcta aagatatcct tattatgtcc tatgatttat cgaaacgact
      301 tgtaatcggc ttagcatcaa gtgccctatt cgacttatcc gaatcggata atatatttag
      361 aatggaaggg gcagaaacct ataggcaata tcagagagaa aaacaaaacc atcccctaaa
      421 aaaggcgttg tctttccatt tattaaaaaa cttctgtcaa tcaatgaaat aaacccaaac
      481 gacccaacga ttgggtttat tcttttatcc agaaacaatc cagatacaga ttacgagtca
      541 taactatagg cttaatatta cacgattttc attccatcaa ggcggaaaac cgcacaaata
      601 ctgaaacact atcgatcgat ttgtaaacaa gcctacttaa gtaacttgca gtccttatca
      661 tttcctttaa aataatccag cccgtcacta cacgaactgg cggacttctt gcaaataaag
      721 gttactagat tttcattcat cttaataata aaaggatttt tatctttatc tatggctacc
      781 gccttcaaca tgaatttact gtctaaggcc ccgcgcgcga ttccattcaa acggatacaa
      841 aagccttctg cctctttaat cggcaaactt ggccatttgg tagatgtttg tttaaatctc
      901 ccattctgca gataaaactt ttccataaaa tgtgcatttt ctaacaaggc tgcccgcact
      961 gcatttatct ttgctttctc aatataattg cgatagctcg gataaacaat taaagcaagt
     1021 acagacaata tcaagaccac tgatattaat tcaaccagcg taaacccccg attatcagtc
     1081 attactttac ttccaataag aacagattat tcaacatatt tctttgaaca gacttactat
     1141 cccattcaac agtatgcata tttcccactc tattttttag cggccggtat a
//
LOCUS       DAXHKG010000232         1151 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.232, whole genome shotgun sequence.
ACCESSION   DAXHKG010000232 DAXHKG010000000
VERSION     DAXHKG010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.232"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..429
                     /locus_tag="ACFMWP_002061"
     CDS             <1..429
                     /locus_tag="ACFMWP_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFC5892585.1"
                     /translation="AIPTQTVKELDGLLQESKNIGAVNTRINIANSTTRYTPMRQTGQ
                     PVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSPVSMTPDGQYMRTV
                     DVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            436..945
                     /locus_tag="ACFMWP_002062"
     CDS             436..945
                     /locus_tag="ACFMWP_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892586.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
BASE COUNT          400 a          199 c          197 g          355 t
ORIGIN      
        1 gctataccaa cccagacagt taaagaactt gatggcttac tacaagaatc aaaaaatata
       61 ggtgctgtaa atacacgaat taatatagcg aatagtacta ctcgatatac accaatgaga
      121 caaacgggac aaccggtatc tgctggcttt gagcatgttc ttgaggggca cttccatagg
      181 cctattgcga ataaccgttc agtttttacc atctccccaa atgaattgaa ggttatactt
      241 caaagtaata aagtagtttc ttctcccgta tcgatgactc ctgatggcca atatatgcgg
      301 actgtcgatg taggaaaagt tattggtact acttctatta aagaaggtgg acaacccaca
      361 actacaatta aagtatttac agataagtca ggaaatttga ttactacata cccagtaaaa
      421 ggaaactaac taaatatgag taactttgaa aaaaaatata ttttagaatt aaatgatgct
      481 ttaagccatt taaatcataa ctctacctca tttgatttat tgaaagtttt gatttcatgg
      541 ttatcaaacg atattgtcat tgataaattt aaaattttag gttatgactt tagtaaatat
      601 atcgaaatga atcccgatga ctatccggtt gaaaaatcta tattgaatag agaggaaatt
      661 atttatctca aaaacaatat ttatcgtaaa atatcatcag gaaattttaa atttcaatac
      721 tttgtacaat atattagaga tattttagaa tatttattta ttgaacatat tgaaagagtc
      781 tgtccttact gcgaatgggg tgaaatgcaa aaattagaag aacaaaatac gcatgaaacg
      841 gtgtatctct gtactcaatg tggatgtgct ttttataacg ataattcaca atttttatta
      901 aaaacccctt taaccattcc aatgaaacgt gatgaattta aataaacaag ccgtagcctg
      961 catgaaccct aaaatccacg tgtagcgtgt gtgcgccagc acgcatgcgt tccatgattt
     1021 acggctcaat gccgtctgaa aagctcacaa tttttcagac ggcatttgtt atgcaagtaa
     1081 atattcagat tccctgtatg ctgtacagac gcgggagtgt taagcccccc ttgtttgaag
     1141 ctccgcggct c
//
LOCUS       DAXHKG010000233         1144 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.233, whole genome shotgun sequence.
ACCESSION   DAXHKG010000233 DAXHKG010000000
VERSION     DAXHKG010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.233"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>1144
                     /gene="tuf"
                     /locus_tag="ACFMWP_002063"
     CDS             <1..>1144
                     /gene="tuf"
                     /locus_tag="ACFMWP_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012081251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFC5892587.1"
                     /translation="RSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQID
                     NAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAA
                     DGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDD
                     CPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRG
                     TVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTK
                     REDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGA
                     VTLEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV"
BASE COUNT          296 a          328 c          300 g          220 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggcggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgcccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggcgccgc acaaatggac ggtgcaatcc tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gccaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatt gtacaaggtt ccgcactgaa agccttggaa ggcgatgccg cttacgaaga
      541 aaaaatcttc gaactggctg ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaaccg ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gcggtacagt
      661 agtaaccggc cgtgtagagc gcggtatcat ccacgttggt gacgagatcg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggcgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 agagcgtggt caggtattgg ccaaaccggg tactatcact cctcacacca agttcaaagc
      901 agaagtgtac gtactgagca aagaagaggg cggccgccat accccgttct tcgccaacta
      961 ccgtccccaa ttctacttcc gtaccaccga cgtaaccggc gcggttactt tggaagaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattacc gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggcctgc gctttgcgat tcgcgaaggc ggccgtaccg tgggtgccgg
     1141 cgtg
//
LOCUS       DAXHKG010000234         1070 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.234, whole genome shotgun sequence.
ACCESSION   DAXHKG010000234 DAXHKG010000000
VERSION     DAXHKG010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.234"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(122..550)
                     /locus_tag="ACFMWP_002064"
     CDS             complement(122..550)
                     /locus_tag="ACFMWP_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HFC5892588.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(531..965)
                     /locus_tag="ACFMWP_002065"
     CDS             complement(531..965)
                     /locus_tag="ACFMWP_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HFC5892589.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTDKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          278 a          318 c          191 g          283 t
ORIGIN      
        1 tttgaaaacc ccattaaacc gtctttaacc catcgtcccg aacggtagat gtttcacccc
       61 tgcaaaccaa aaaaaagacc gtctgaatac agacggccaa agcctggtca cacatcactg
      121 cctaaaataa agctgcctgc tgtgccgcag gtcggctcat ttcattgata atcgtatatc
      181 ccgttcgtga agagatgccg tatttagggc atagcttcgt catcgccata agcccgctct
      241 ccttatcaat atcgcgcaat ttgacaaact cctgataaaa cctatggttt ctcaactgta
      301 ttaacgcctt gccgcaccgt gggacataca attcctcgcc accatatacc tgcaacagct
      361 catgtgtttt cacttcgccg atggcttcga ccaaaattgc caaacgctcg gtgtccacct
      421 tgcccttacc aaatttaaac cgcgccccgc caatcgcctt gaccagctgt tccgtcgctg
      481 ccagtccgat gacatccaca atgtccaaca cggtatccgg caataaatgt tcaacttttt
      541 cgaaccccat catccccacc cgctttttcc gttttcctgt tttccgcaat ctgcaacgca
      601 gcaaccagtt tatgtagctg cgtatcgtct aaatattcga ccttatcctt accaaacatc
      661 cgccgcgcca ttgcgtgtgc atagttccaa tgtttgccgc cgacggtcag cagggcttcg
      721 actttgtcca gcattgccgc tgatgatgtc cgacgcagat gcggtttgcc gtgtgggtta
      781 ccttttgctt taggcttaaa tccgtgcgac cgcatatcag cgacaacaga ctcaagttca
      841 gaaacatcca tatccgcaca cgaccgctta tccgtcacac gctccaacac cgcgcgatag
      901 gtaccgtcat ccaagcccag ctccttttga gcaatcttaa ttttcgcaat caacgcccgg
      961 cgcattatct ctctaataca acatatagta taaattagcg cattttatac aataaaatac
     1021 aatatatatt attaagccga tgtttttttg cgaaacggac agacataaaa
//
LOCUS       DAXHKG010000235         1032 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.235, whole genome shotgun sequence.
ACCESSION   DAXHKG010000235 DAXHKG010000000
VERSION     DAXHKG010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.235"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(299..685)
                     /locus_tag="ACFMWP_002066"
     CDS             complement(299..685)
                     /locus_tag="ACFMWP_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HFC5892590.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGTSARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
     gene            complement(682..927)
                     /locus_tag="ACFMWP_002067"
     CDS             complement(682..927)
                     /locus_tag="ACFMWP_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HFC5892591.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMGNTDISRILEDDNETAALFEESAL"
BASE COUNT          278 a          243 c          185 g          326 t
ORIGIN      
        1 cagccatata tattaagtac ctgctcttta tgcgcttttt taggaaagga agatcaaacg
       61 gttcaatagc gaagtcttgc ccaaatttga tggacaggat atagaataca tgcgtgcata
      121 ccacaccctg ccaaagttgg gagatgcact taaggttgca cttgtggtcg ccaactatgc
      181 ctatacacgc ggatttcccg cgtttatagg ccgcgacgga agtctggctt ttaagcgaag
      241 acaataaccg aaaagaccgc ctcggcggtc tttcttgtgt acacagtttt tgtatttgtc
      301 agcttgatgc attgacaact ctaattccat attgcggaat atattcatcg acagtcatca
      361 gttcaaagcc ttccgcttgg gtttgtgcaa tcaacatcct atcgaaaggg tctttgtgta
      421 tttccggaag gcttccagcc tgttttgcat gaaacagacc tataggcagc atttcaaaat
      481 cctcttcttg aagcacatca aaaaactctt ccggtaattt caacaacccc ttgttctgct
      541 tgatggaaat ttcccaaata cttgctgcac tgacaaagat cgcatttctc ggattttcta
      601 tcagtttgcg tgcagatgtc cccagtttct tgtcatccaa caaccaccac agcaaagcat
      661 gggtatcaag cagaatcttt ctcacagagc cgactcctca aataaagctg ccgtttcatt
      721 gtcatcctca agaatacgtg aaatatccgt atttcccata tgactgaatt ttttcaacct
      781 tcctgcattt cgtgccggtt tttcaatacc ggttagttgg acgcaaggct tacctgcttt
      841 cgcaataata acgatttccc ctgcttctgc tctttgaatc aattgactca aattggtttt
      901 tgcctgatga atatttgctt gaaacataac acttctcatg attagctaac ttaactaata
      961 tacatcatta ccaagatttt gggaatctca ttacatatat ttgattatat ccgccgtttt
     1021 attcacacct tg
//
LOCUS       DAXHKG010000236         1019 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.236, whole genome shotgun sequence.
ACCESSION   DAXHKG010000236 DAXHKG010000000
VERSION     DAXHKG010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.236"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..263
                     /locus_tag="ACFMWP_002068"
     CDS             <1..263
                     /locus_tag="ACFMWP_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="deaminase domain-containing protein"
                     /protein_id="HFC5892592.1"
                     /translation="PETKIFKPISVDKYHNIASPPRGTLRNIDGEYKLLETIAQQLGN
                     NRNVSGRIDLFTELKACQSCSNVILEFRNRYPNIQLNIFTGK"
     gene            268..651
                     /locus_tag="ACFMWP_002069"
     CDS             268..651
                     /locus_tag="ACFMWP_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892593.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
BASE COUNT          372 a          180 c          168 g          299 t
ORIGIN      
        1 tacctgaaac aaaaattttt aaacctatat ctgttgataa atatcataat attgcctctc
       61 ctcctagagg aacattaaga aatatagatg gagaatataa attacttgaa actatagcac
      121 agcaactcgg aaataatcgt aatgtatcag gtagaattga tctatttaca gaattaaagg
      181 cctgtcaatc ttgcagcaat gttattttag agtttagaaa tcgctatcca aatattcaat
      241 taaatatttt tacaggaaaa tagaatcatg gaaaaaataa aaaattatat agaattcaag
      301 aaattattta aaaatataac ggaaaaattt gtcagagatt tagatataac attaattgaa
      361 gcagctgaat attctataat tgaattcgaa atttatttat ctgaatatcc ggaagatagt
      421 acatttattt ttacagcatg ggcaatctat ctgttagaaa ataactgtct caatgaaaga
      481 ggaaaagata attttttcat cgcggaaatg aaaaaatgtt atcaacaaac taatttggat
      541 agaataaaat ctatctattc ttcgagtgac tatcatattt ttgctaagga tgtaaacaag
      601 attcaacaaa catttaaatt aaatcttgcc aatatcatgc agcaagagta gcaactgtat
      661 ttttaacccc gtcgggcaaa attaccaaaa acggtaaatc actaaaaata cttttatacc
      721 gccgccgcag caagctgtag cctgcatgaa acctaaaatc catgcgtaag gtgtgtgctt
      781 cagcacgcac gcgttccatg atttacggct caatgccgtc tgaaaagctc acaatttttc
      841 agacggcatt tgttattcaa gtaaatattc agattcccta tatactgccc agacgcgtgc
      901 gtgctgaaga caccccctac gcttgctgca gaactttcgg gtaaaaccgg tgtgagcatt
      961 agcgcaccgt atgccaatga gaacagccgc atcattttga gtgccgccga tatagccgc
//
LOCUS       DAXHKG010000237          987 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.237, whole genome shotgun sequence.
ACCESSION   DAXHKG010000237 DAXHKG010000000
VERSION     DAXHKG010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.237"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(112..744)
                     /gene="mtrR"
                     /locus_tag="ACFMWP_002070"
     CDS             complement(112..744)
                     /gene="mtrR"
                     /locus_tag="ACFMWP_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HFC5892594.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          233 a          215 c          256 g          283 t
ORIGIN      
        1 ctatgttatt gcaaaggtct caatatgtat ttttagaaga aggctttgtg tcattttgat
       61 gccgtctgaa agggtttgtt cgtttcagac ggcattgtta ccaaggcttg attatttccg
      121 gcgcaggtcg ggatggtttt ccaagttgtc catcattatc ccgatgatgc gcggggcggt
      181 tttgcccaaa tcgaaacgtt cgcaggaaga gaaccaccgc caaatcagcc cgtccaaggt
      241 tgatttgatg aagatgaccg ctgtttcctt gtccaaatcg tcagccaaat cctgattttc
      301 caccgcttcg gtcaaaacgg cggtaatttt ctcgcgccag attgcctgat gcttgcgggc
      361 aatggcgata acggcggcgt tttgttccgt gtgttcgcat tttaaaaaca ggatgttgtg
      421 gaatttgtag tagatgtcgt tgctttgcag ccgctcgaaa aagtgcagca gcgtgtggcg
      481 gaataccgcc caagaccctc cttcggcatc ttcggcatct tgcgcgatgc agttttcgat
      541 gtcgtcgcag atacgttgga acagcgcgtc gaacaagtct tccttatttt tgaaatgcca
      601 atagagcgcg ccgcgcgtta cgccggcggc ttgggcgatt tcgttgagcg aggtgcgcgc
      661 aatccctttg cggtaaaagg tttccaaggc ggcaagcatc aggtgttctt tggttttcaa
      721 ggcttcggtt ttggtttttc tcataatggc gttttcgttt cgggtcggtt tgatgagggc
      781 ggattataaa aaagactttg taaccatgca atcgtgtatg tataatgaaa cccatgaaat
      841 tgagactaca tctcaacttt gaaaacaggc ataacctgct ttgcaacccg ttcgaacatt
      901 cgggtatcaa agcaggcggt ttttatatcc tgaaatatag tggattaaca aaaatcagga
      961 caaggcgacg aagccgcaga cagtaca
//
LOCUS       DAXHKG010000238          936 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.238, whole genome shotgun sequence.
ACCESSION   DAXHKG010000238 DAXHKG010000000
VERSION     DAXHKG010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..936
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.238"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            81..884
                     /locus_tag="ACFMWP_002071"
     CDS             81..884
                     /locus_tag="ACFMWP_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC5892595.1"
                     /translation="MNPAPKNLLFSSLLFSSLLFSSAAQAASEDGSRSPYYVQADLAY
                     AAERITHDYPKPTGTDKDKISTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYR
                     KWNNNKYSVNTKEVQRHSNGNREDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKF
                     KPYIGARVAYGHVKHQVHSVETKTTIVTSKPTGGATVGGTIPSSVIKPAYHERNSISS
                     VGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYRF"
BASE COUNT          266 a          263 c          197 g          210 t
ORIGIN      
        1 caaacctgat atagtccgct cctgcaacat cattgaaaat tgttcttttt aatcagttaa
       61 aaccgaatac ggagtcgaaa atgaatccag cccccaaaaa ccttctcttc tcttctcttc
      121 tcttctcttc tcttctcttc tcttccgcag cgcaggcggc aagtgaagac ggcagccgca
      181 gcccgtatta tgtgcaggcg gatttagcct acgccgccga acgcattacc cacgattatc
      241 cgaaaccaac cggtacagac aaagacaaaa taagcacagt aagcgattat ttcagaaaca
      301 tccgtgcgca ttccatccac ccccgggtgt cggtcggcta cgatttcggc ggctggagga
      361 tagcggcaga ttatgccagt tacagaaaat ggaacaacaa taaatattcc gtcaacacaa
      421 aagaggtgca aagacatagc aatggcaaca gggaagacct gaagacggaa aatcaggaaa
      481 acggtacgtt ccacgccgtc tcttctctcg gcttatcagc catttacgat ttcaaactca
      541 acgataaatt cgataaattc aaaccctata tcggtgcgcg cgtcgcctac ggacacgtta
      601 aacatcaggt tcattcggtg gaaaccaaaa ccacgattgt tacctctaaa ccaacgggag
      661 gtgctacagt gggaggcact atcccaagtt cggtcatcaa acctgcctat cacgaaagaa
      721 acagcatcag cagcgtgggt cttggtgtca tcgccggtgt cggtttcgac atcacgccca
      781 agctgacttt agacaccgga taccgctacc acaactgggg acgcttggaa aacacccgct
      841 tcaaaaccca cgaagtctca ttgggcatgc gctaccgctt ctgattcccc gacaccgatg
      901 ccgtctgaac cttcagacgg catttttgat tcacct
//
LOCUS       DAXHKG010000239          931 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.239, whole genome shotgun sequence.
ACCESSION   DAXHKG010000239 DAXHKG010000000
VERSION     DAXHKG010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.239"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            32..817
                     /locus_tag="ACFMWP_002072"
     CDS             32..817
                     /locus_tag="ACFMWP_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC5892596.1"
                     /translation="MQPQKTFSSLLFSSLLFSSAAQAASEDGSRSPYYVQADLAYAAE
                     RITHDYPQATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYARYRKWNNN
                     KYSVNTKNVQKNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPYIG
                     VRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIRRLGLGVI
                     AGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYRF"
BASE COUNT          258 a          280 c          187 g          206 t
ORIGIN      
        1 ttctttttta cgaatacgga gtcgaaaatg aatccagccc caaaaaacct tctcttctct
       61 tctcttctct tctcttctct tctcttccgc agcgcaggcg gcaagtgaag acggcagtcg
      121 cagcccgtat tatgtgcagg cggatttagc ctacgccgcc gaacgcatta cccacgatta
      181 tccgcaagca accggtgcaa acaacacaag cacagtaagc gattatttca gaaacatccg
      241 tgcgcattcc atccaccccc gggtgtcggt cggctacgac tttggcggct ggagaatagc
      301 ggcagattat gcccgttaca gaaaatggaa caacaataaa tattccgtca acacaaaaaa
      361 tgtgcaaaaa aacgacaatg gcaacaggca agacctgaag acggaaaatc aggaaaacgg
      421 tacattccac gccgtttctt ctctcggctt atccgccatt tacgatttca aactcaacga
      481 taaattcgat aaattcaaac cctatatcgg tgtgcgcgtc gcctacggac acgtcagaca
      541 cagcatcgat tcgaccaaaa aaacaacaaa tgttgttacc gtcgccggtg ctgctaacac
      601 agcacctacg atttattatg caccagagac gcaaaacgcc tatcacgaaa gccacagcat
      661 ccgccgcttg ggtcttggtg tcatcgccgg tgtcggtttc gacatcacgc ccaagctgac
      721 cctggacacc ggataccgtt accacaactg gggacgcttg gaaaacaccc gcttcaaaac
      781 ccacgaagtc tcattgggca tgcgctaccg cttctgattc cccgataccg atgccgtctg
      841 aaccttcaga cggcattttt tacacaattc ccaccgtttc ccatcattcc cgatacaccg
      901 taatctcgaa acccgtcatt cccgcgcagg c
//
LOCUS       DAXHKG010000240          905 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.240, whole genome shotgun sequence.
ACCESSION   DAXHKG010000240 DAXHKG010000000
VERSION     DAXHKG010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.240"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..215
                     /locus_tag="ACFMWP_002073"
     CDS             <1..215
                     /locus_tag="ACFMWP_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892597.1"
                     /translation="DAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATLLALDWQGN
                     KPLGAEELADLKPLYKDLKNNIGNIV"
     gene            546..>905
                     /locus_tag="ACFMWP_002074"
     CDS             546..>905
                     /locus_tag="ACFMWP_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HFC5892598.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          282 a          147 c          211 g          265 t
ORIGIN      
        1 ctgatgccgg agacgtatat tgcgtctata acatcagact gaagcagtac actgcctgcc
       61 aggttacccg agttgaagaa cacggtggca aaaaaacaca tgcgaccctg ctggctttgg
      121 actggcaggg caacaaaccg cttggggcgg aggagctggc ggatttgaaa ccactttaca
      181 aagacttaaa gaataatatt ggaaatattg tatgaacaaa aaattaaact atatttttat
      241 gttggactgt ttagggttgg tgatattgtt tacttgtata atagctactt ttgaaagaga
      301 ttatggattt aaaattttta ctaattctaa gaggcctgaa ttttattatt ggattggaat
      361 gttttattat ggaattattt cttgctggtt tgattatcaa ttaatttcaa caaaggcgaa
      421 ttcgtataaa agaaaagtta aacaatataa aattttttca gtaatatttt cagttttgat
      481 atttatttct actatagtaa aactttaaat tttggagcaa aaatttatga gcgattcaat
      541 tgaatatgta ttgggaacgc ggtctgcaca tgtataaggc aagtgctgtc gtgccaacgg
      601 gatatgtacg ggttgggaat accgcgccgc tggtcggcga agacacgcaa cggtatgcct
      661 ctttttgggg cgacggctac gacgtgtacc gtcagttgag atggcagcag atacccgaaa
      721 aacagagaaa ggcattcaaa aaagccgcca aaagcaaaaa gaccgtgatg tttgccggac
      781 gggaatacgg catatccaaa cagaatttga gcgatgtttg ggatgatttt gaagacgcga
      841 tggaactgaa ggcgtttccc tgcctgtctt cgctgtttct gaccaagtgg cataaaaatc
      901 tatat
//
LOCUS       DAXHKG010000241          880 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.241, whole genome shotgun sequence.
ACCESSION   DAXHKG010000241 DAXHKG010000000
VERSION     DAXHKG010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.241"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(464..>880)
                     /locus_tag="ACFMWP_002075"
     CDS             complement(464..>880)
                     /locus_tag="ACFMWP_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC5892599.1"
                     /translation="IIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKID
                     AIRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKEL
                     SDIGVLQEIVIGRDKLFIHPRLMELLRGEGNSFTSF"
BASE COUNT          212 a          185 c          206 g          277 t
ORIGIN      
        1 taggtttcca tgcggacgcg ttcggattca cgactgcgcg gaaatgacgg gattttggtg
       61 tattccctaa aaaaataaaa aaacatttgc aactttgtta aaaataaagg ctgtgtttta
      121 acgatgtgtt gatatttaat tttagaaagg tagctattta atagttacct tttcttattt
      181 aaaaatagct ttctcaaatt ccatgaacgc ctcaatacga tatgcagatg ctctatcgaa
      241 attaagtttc aacattttgt ttattaaaca ttttatttta gccatttttc aatatacccc
      301 caaatatacc cccaatttgc acaagtcaaa attttaggca ggggttttgt tgctcccatg
      361 atacgcgggc ggatgccggc ttttcgcggg ggaaatacaa ggggtctcgg ttcgggtgtc
      421 aaaatccctg tttcgtgtta gtcatgtggg ggggaagagg gggttagaat gaagtaaagc
      481 tgttgccctc tccccgcaat agttccatta ggcgcggatg aatgaatagt ttgtccctgc
      541 cgatgacgat ttcttgcagc acacctatgt ctgaaagctc tttcaggtac ttagaggccg
      601 tctgccgttt ggctatccct gccgcttcta ggttggcaat gcgtgtatat ggctgctcaa
      661 acagaagatt taccagttcg tgcgtgtaga ttccttgtgc gtgtgtccgt atgtgttgcc
      721 gtgtctgctc gaacaggcgg cgtatcgcat ctattttcga taccgtccaa tcggcggtgt
      781 cggctacgcc gtctaagatg tagattatcc agctttccca atcctgccgt tcggttacgc
      841 ctaaaagcag gcggtaatag tccgccctgt tttcgatgat
//
LOCUS       DAXHKG010000242          867 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.242, whole genome shotgun sequence.
ACCESSION   DAXHKG010000242 DAXHKG010000000
VERSION     DAXHKG010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.242"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(48..827)
                     /locus_tag="ACFMWP_002076"
     CDS             complement(48..827)
                     /locus_tag="ACFMWP_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HFC5892600.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          200 a          288 c          173 g          206 t
ORIGIN      
        1 ttcactatac cgatacatcc gaatatgcca gaccgtctaa acggtattca tacctcccaa
       61 tcctgcacgc gcttcaaatc gttttgcgcc aaagtatccg cgtggcggtt acggctctga
      121 tattccctgt ctttcatgat gctgcttgcc acataattca aatgtgcctt tgccgcctcc
      181 gaagcctcgc ccggccgacg gttcgatatc gcctcataca gcacgcggtg ctgcgccatc
      241 agtttcggac gcggatcttc ttcctgattc agataaataa ggctgctgcg cgtctgccgg
      301 tacagcattt tcaacaaacc gcccgacaaa tggctgaaca acaaattgtg cgccgcatcc
      361 gcaatcgtct gatggaagct gacatcggct tcgctctgat gttccagatt gccgctttcg
      421 cacgcctcct caaacttttc aagccaaaac ccaatccgct tcaaatcggc atccgtccgg
      481 cgttctgccg ccaatgccgc catacagccc tcgatgtggc agctgaaatc aaaaacatcc
      541 tgttcccaat tggaatgctt gcccaaaagc tcctgccaac tttgcaaaaa atcctgctgc
      601 ggcttgaccg aaacataata accgtctccc tgcctcgctt ccaaaacctg acgggcgacc
      661 aaaacattca atgccgacct gaccgacggg cgggacacgc cgaactcttc cgccaaaacg
      721 cgttcgggcg gaatcttgcc cccttccgcg taaacccctt ccacgatgcg gccttccaat
      781 accgacaata cctgatcgct gattttctga ggccttacca gtttcatcac tcctccttta
      841 taaagattcc ctgccgaacc cttccga
//
LOCUS       DAXHKG010000243          802 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.243, whole genome shotgun sequence.
ACCESSION   DAXHKG010000243 DAXHKG010000000
VERSION     DAXHKG010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.243"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            4..234
                     /locus_tag="ACFMWP_002077"
     CDS             4..234
                     /locus_tag="ACFMWP_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC5892601.1"
                     /translation="MAQKEFEEFVNNVKEYDILESFSYFLNKRVAHNIWKIYFSDESV
                     IFIRKSEENGKTVHEFVYQEYTDSSDFNSMFE"
     gene            176..616
                     /locus_tag="ACFMWP_002078"
     CDS             176..616
                     /locus_tag="ACFMWP_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC5892602.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLERSQIKFQSSNNLKSS
                     GFKLDSSSKSFAKFIEAANFEHIPTGAKARINAKITASVSRAGVLAGVGKLARLGAKF
                     STRAVPYVGTALLAHDVYETFKEDIQARGYQYDPETDKFAKVSG"
BASE COUNT          249 a          148 c          182 g          223 t
ORIGIN      
        1 ttaattgctc agaaagaatt tgaagaattt gttaataacg taaaagagta cgatatttta
       61 gagagtttct cttatttctt aaataagaga gtcgcacata atatttggaa gatttatttt
      121 tctgatgaat ctgttatttt tataagaaaa tcagaagaga acggaaaaac tgttcatgaa
      181 ttcgtttatc aagagtacac cgatagttct gattttaatt ctatgttcga gtaattctta
      241 ttctgaacct gtaagattag aaagatcaca aattaaattt caatcaagta ataatttaaa
      301 atcaagtggt tttaaattag attcaagttc taagagtttt gccaaattca tagaagcggc
      361 aaattttgag cacatcccta cgggcgcaaa agcccgaatc aacgccaaaa taaccgccag
      421 cgtttcccgc gccggcgtat tggcgggggt cggcaaactt gcccgcttag gcgcgaaatt
      481 cagcacaagg gcggttccct atgtcggaac agccctttta gcccacgacg tatacgaaac
      541 tttcaaagaa gacatacagg cacgaggcta ccaatacgac cccgaaaccg acaaatttgc
      601 aaaggtctca ggctaagtgc gcctgttgcc gcctaaaagg taacccggat gcctgattat
      661 cgggtatccg gggaggatta agggggtatt tgggtagaat tagggagtga ttggtagcgg
      721 aaatagacga aaacctgtgt ttgggtttcg gctgtcggga gggaaaggaa ttttgcaaag
      781 gtctcttttc gtcattcccg cc
//
LOCUS       DAXHKG010000244          772 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.244, whole genome shotgun sequence.
ACCESSION   DAXHKG010000244 DAXHKG010000000
VERSION     DAXHKG010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.244"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            88..606
                     /locus_tag="ACFMWP_002079"
     CDS             88..606
                     /locus_tag="ACFMWP_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892603.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKKE
                     KGNYFLNKINVFTGKEESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLL"
BASE COUNT          227 a          157 c          221 g          167 t
ORIGIN      
        1 caactatagt ttttgcaaat caatattgac aagctgaaaa aaaaaaacaa tatactcgct
       61 cggtcttaat gttaacggag tatggaaatg aaacaaatgc ttttagccgt cggcgtggtg
      121 gcggtgttgg cgggctgcgg caaggatgcc ggcggttacg agggttattg gcgcgaaaag
      181 tcggacaaaa aagagggcgt gattgccgtc aaaaaagaaa aaggcaatta cttccttaat
      241 aaaatcaacg tatttacagg caaggaggag tctttgcttt tgtctgaaaa agacggcgcg
      301 ctttcgataa acacggggat aggggaaatc ccgatcaaac tttccgacga cgggaaagag
      361 ctgtatgtcg aacgcaggca gtatgtcaaa accgatgcgg cgatgaagga caaaatcatc
      421 gcccatcaga aaaagtgcgg acaaacggca caggcatacc tcgacgcgcg aaaggcgttg
      481 ccgtcaaacc aaacgtatca gcagcgtcag gcggcgatcg agcagttgaa acggcggttt
      541 gaagccgagt ttgacgaatt ggaaaaagaa atcaaatgca acggcaaacc gacattgttg
      601 ctttagcaga ggacaaccgg gaggatgccg ccgtccgaat cggacgtgcg gttttcgtac
      661 cggtacgggc gggcaggaat gtccgctttt tttgttcgga cgcgtttgaa tacccgtttg
      721 attccgtccg tttgcaaggg gtatttccgt tcgggcggaa attatagtgg at
//
LOCUS       DAXHKG010000245          769 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.245, whole genome shotgun sequence.
ACCESSION   DAXHKG010000245 DAXHKG010000000
VERSION     DAXHKG010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.245"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..599)
                     /locus_tag="ACFMWP_002080"
     CDS             complement(<1..599)
                     /locus_tag="ACFMWP_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC5892604.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKAKLKSVTERRRFWEKQFNGRFAALVKNQQTAQA"
BASE COUNT          154 a          196 c          241 g          178 t
ORIGIN      
        1 tcggcttggg cggtttgttg atttttaacg agggcggcaa aacggccgtt gaactgcttt
       61 tcccaaaaac ggcggcgttc ggtaacggat ttcagtttgg ctttgaccgc atcgcgccat
      121 cttccggaga tttccgccat atcgcccaaa gacggcggca gcagggcttc cagcctttca
      181 cgcagcagtc gggcgaggac gggcgcgctg ccggagctgg aaacggcaat ctgaaccggg
      241 ttgcggtcga taaccgacgg gaagatgaag ctgcaatggt cgcggtcgtc caccacgttg
      301 accggctttt ggcagctttc ggcaagatgg aaaacgcgcc ggttgagggc ttggtcgctg
      361 cttgccgcaa tgatgaggaa aaccgtgcgg atgtgttcgg cacgaaattc ttcggcaagc
      421 cacaggattt tgttttccgc cgccaacgcg gagagttcgg cattcaggtg ttttgcggca
      481 accctgacct ctgcgcccgc cttcagcagc aggctgattt tgcgtgcggc gaccgcgccg
      541 ccgcctacga ccaatacggg gcggccggcg aggttggcga aaatagggaa ataattcact
      601 ggctgactcc tttgctgttt gcccgcacct tgtttccgat acggtgcgtc gcggcatttt
      661 tgtcggaatg cgggtcattt tagacaaaag gattttcccg gttaaataat aaaaaggcat
      721 ttgttagaag ctgaaagcta tatgagggcg gctgcggatg cggcggttt
//
LOCUS       DAXHKG010000246          766 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.246, whole genome shotgun sequence.
ACCESSION   DAXHKG010000246 DAXHKG010000000
VERSION     DAXHKG010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.246"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(154..549)
                     /locus_tag="ACFMWP_002081"
     CDS             complement(154..549)
                     /locus_tag="ACFMWP_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC5892605.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKFVKVSG"
     gene            complement(533..>766)
                     /locus_tag="ACFMWP_002082"
     CDS             complement(533..>766)
                     /locus_tag="ACFMWP_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC5892606.1"
                     /translation="VIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFSDNS
                     EMVIKESLKDGHKIYKFEFCEIVDNCNFDDVFV"
BASE COUNT          206 a          179 c          137 g          244 t
ORIGIN      
        1 ttcctttccc tcccgacagc cgaaacccca acacaggttt tcggctgttt tcaccccaaa
       61 tacctcctaa ttttacccaa ataccccctt aatcctcccc ggatacccga taatcaggca
      121 tccgggttac cttttaggcg gcaacaggcg cacttagcct gagaccttta caaatttgtc
      181 ggtttcggtg tcgtattggt agcctcgtgc ctgtatgtct tctttgaaag tttcgtatac
      241 gtcatgggct aaaagggctg ttccgacata gggaaccgcc cttgtgctga atttcgcgcc
      301 taagcgggca agtttgccgc cccccgccaa tacgccggcg cgggaaatgc tggcggttat
      361 tttggcgttg attcgggctt ttgcgcccgt agggatgtgt gttaaatcta ccgtttttat
      421 taaatcagat gaataagttt tactattttt aggtacaaac ttatgaattt tcgcaccttg
      481 tccggtatca actgaaacag tttcagatat ttttactgca tttgcattcg cttcaaacga
      541 atacatcatc aaaattgcaa ttatcgacaa tttcgcaaaa ttcaaatttg tatattttat
      601 gaccatcttt cagggattct ttaattacca tttctgaatt atcagaaaat gagattagcc
      661 aaatatcatg tttaattctt ctattccaga aaaaagagaa acaatcaata acattttcag
      721 acttattaat cttcgcaaat tcaacaaatt cagattgcgc tataac
//
LOCUS       DAXHKG010000247          752 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.247, whole genome shotgun sequence.
ACCESSION   DAXHKG010000247 DAXHKG010000000
VERSION     DAXHKG010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.247"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            82..>752
                     /locus_tag="ACFMWP_002083"
     CDS             82..>752
                     /locus_tag="ACFMWP_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC5892607.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCITARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLP"
BASE COUNT          230 a          202 c          161 g          159 t
ORIGIN      
        1 aatttttaaa catatatcct tgatatatac acggcgtaaa catatactgg aaacatcttt
       61 aaattttccg aaattttaaa tatgagcaac tggaaacccg atattcccta taacgattta
      121 ccacccctgc cgccaaaaca ggatattgaa agcaaaacca tcctgaaacg ttgtataacc
      181 gcccgtgcat cccttgcccg tttaaagcag gcggcagaac tgataccgaa tcaagccatg
      241 ctgattaaca cccttcctgt tatggaagcc cgtgcaagtt cggaaattga aaacatcgta
      301 accacaacgg ataagctgtt tcaatccctg caaatggata cggaacggca agaccctgcc
      361 acgaaagaag ccctgcaata ccgcaccgcc ctgtttgcag gctatgaatc actgacgagc
      421 cgccctttat gcacacaaac cgccatcatg gtctgcaacg ccatcaagca cccctacgaa
      481 atggccatcc gcaaaacagg cggcacagcc ctaaaaggag gcaacagcgg aaatgttgtc
      541 tataccccgc ccgaaggaga agaaaccata cgcggcaagc tggcaaattg ggagcggttt
      601 attcacgaaa gcggcgattt agacccgctt atcatcatgg cggcggcaca ttaccaattt
      661 gaagccatcc atccgtttac ggacggcaac gggcggacgg ggcgcatatt gaacagcctg
      721 ctattgattg aaaaagggct tttggatttg cc
//
LOCUS       DAXHKG010000248          751 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.248, whole genome shotgun sequence.
ACCESSION   DAXHKG010000248 DAXHKG010000000
VERSION     DAXHKG010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.248"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>751
                     /locus_tag="ACFMWP_002084"
     CDS             <1..>751
                     /locus_tag="ACFMWP_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892608.1"
                     /translation="FLQSVMMDLTKLGVEYTIDGWQKIGGWGNGIINDLYKSVVKREW
                     TGIFEIVNNNIKQGNEAFKNEINSLVHDMKAAGKEFGDDLNTQWNNLTQAAEIIYNDI
                     VDNTSQGIEKGVKAIKELSEKMKNAASDLADGSAEKAKQVVEDLAQAAKEAYENAKST
                     AEKAAQAAREFFKGLPSFKDLAEKFRDLFPNPEGWIDDGHQCFAPWVKETKKRNGKYH
                     VYDPLALDLDGDGIETVATKGFSGSLFDHNR"
BASE COUNT          265 a          128 c          171 g          187 t
ORIGIN      
        1 cttttttaca atctgtgatg atggatctaa caaagttagg tgttgaatat acaatagatg
       61 gttggcaaaa aattggaggt tggggtaatg ggataatcaa tgatttatat aaaagtgttg
      121 taaaaagaga gtggactgga atatttgaga tcgttaataa taacatcaag caaggaaatg
      181 aagcttttaa aaatgaaatc aatagcttgg ttcatgatat gaaagctgct ggcaaggaat
      241 ttggagatga cttaaataca cagtggaata atctcactca ggctgccgaa ataatctata
      301 atgacatagt agacaatact agtcaaggaa tagaaaaagg tgtcaaagcc attaaagaat
      361 tgtctgaaaa aatgaaaaat gctgcttccg atttggctga cggttcagca gagaaagcta
      421 aacaagtagt ggaagatttg gctcaagccg ccaaagaagc atacgaaaat gccaaatcca
      481 cagccgagaa ggctgctcaa gcagctcgag aattttttaa gggcttgccc agttttaaag
      541 atctggccga aaaatttaga gatctgttcc caaatccgga aggctggatc gatgatggtc
      601 accaatgttt cgctccttgg gttaaagaaa ctaaaaaacg caatggcaaa tatcatgtct
      661 acgaccccct tgccctagat ttggacggcg acggcataga aaccgttgcc accaaaggct
      721 tttcaggcag cctatttgac cacaaccgcg a
//
LOCUS       DAXHKG010000249          705 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.249, whole genome shotgun sequence.
ACCESSION   DAXHKG010000249 DAXHKG010000000
VERSION     DAXHKG010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.249"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            28..705
                     /locus_tag="ACFMWP_002085"
     CDS             28..705
                     /locus_tag="ACFMWP_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HFC5892609.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT          218 a          137 c          156 g          194 t
ORIGIN      
        1 catcaaaaaa cctgataagc tcctaatatg aaactaaaaa ataagtatca aaagttcagc
       61 aaaatttcag agcaaaagtt tagagaaata atccgctgtt tcgctcttga tttgaccgct
      121 tccgatactg ctaaaatgac cggcattagt gtacgcggta tcaatcctat tttcctgaaa
      181 atcagacaca ggattgctgc tctgtgcgaa caaagctcac cactgtccgg tgtggtcgaa
      241 ttagatgaat cttactttgg tgcgcgacgt atcaggggta agcgcggtcg cggagcgtca
      301 ggtaaaacca tcgtatttgg catactgaaa cgcaatggcg tggtctatac ggaaatcgtt
      361 cccgacgctt cgaaagcctc actaatcaag gtcatacgtg gtcacatatc tgctgacagt
      421 gaaatcaata ctgacggctg gaaagcatat gacggtcttg tcgatatggg ctatgagaag
      481 cattaccgtg tccatcatgg ttccaatgag tttgctcgag gaaagcaaca tatcaatggt
      541 attgaatctt tttggagtta tactaagggg cgtttggcta aatttcatgg tatttccaaa
      601 gagatgtttt atctgcatct caaagaaacg gagtttaggt ttaaccaccg gcatgaagat
      661 ttaggtaaaa tattaatgaa gatgcttcga aataacccaa tttaa
//
LOCUS       DAXHKG010000250          677 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.250, whole genome shotgun sequence.
ACCESSION   DAXHKG010000250 DAXHKG010000000
VERSION     DAXHKG010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.250"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            38..677
                     /locus_tag="ACFMWP_002086"
                     /pseudo
     CDS             38..677
                     /locus_tag="ACFMWP_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581361.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
BASE COUNT          205 a          189 c          134 g          149 t
ORIGIN      
        1 ttctttttaa tcagttaaac cgaatacgga gtcgaaaatg aatccagccc ccaaaaaacc
       61 ttctcttctc ttctcttctc ttctcttctc ttctcttctc ttccgcagcg caggcggcaa
      121 gtgaagacag cgggcacggc ccgtattatg tgcaggcgga tttagcttat gccgccgaac
      181 gtattaccca cgattatccg aaagcaaccg gtgcaaacaa cacaagcaca gtaagcgatt
      241 atttcagaaa catccgtgcg cattccatcc acccccgggt gtcggtcggc tacgatttcg
      301 gcgactggag aatagcggca gattatgcca gttacagaaa atggaacaac aataaatatt
      361 ccgtcaacac aaaagagttg gaaaacaagc ttaacaataa gaaagacctg aagacggaaa
      421 atcaggaaaa cggtacattc cacgccgctt cttctctcgg cttatccgcc atttacgatt
      481 tcaaactcaa cgataaattc aaaccctata tcggtgcgcg cgtcgcctac ggacacgtta
      541 aacatcaggt tcattcggtg gaaagcaaaa ccacgattgt taccactgca ccaacgcaag
      601 gtgctctaaa gggaggcact atcctacaag gtccgacccc caaacctccc tatcacgaaa
      661 gcaacagcat cagcagc
//
LOCUS       DAXHKG010000251          652 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.251, whole genome shotgun sequence.
ACCESSION   DAXHKG010000251 DAXHKG010000000
VERSION     DAXHKG010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.251"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(51..536)
                     /locus_tag="ACFMWP_002087"
     CDS             complement(51..536)
                     /locus_tag="ACFMWP_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HFC5892610.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          195 a          211 c          116 g          130 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaatcttc agacggcatt ccattcatat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaataccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcgcccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaacctgccg ccatcaaaaa caacgtccag ccgccgccca accaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aagactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca cg
//
LOCUS       DAXHKG010000252          601 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.252, whole genome shotgun sequence.
ACCESSION   DAXHKG010000252 DAXHKG010000000
VERSION     DAXHKG010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.252"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..593
                     /locus_tag="ACFMWP_002088"
     CDS             <1..593
                     /locus_tag="ACFMWP_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HFC5892611.1"
                     /translation="RESIDATIIQTAGSKQRQAIEVDEEGQISGQTTPSKDSDARWIK
                     KNGLYKLGYKQHTRTDVEGYIEKLHITPANAHECKHLPPLLEGIAEGTTVYADKGYDS
                     AENRQHLEERQLLDGIMRKACRNRPLSEAQTKRNRYLSKTRYVVEQSFGTLHRKFRYA
                     RSTYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT          180 a          162 c          153 g          106 t
ORIGIN      
        1 gtagagaaag cattgacgcc accattattc agaccgctgg cagcaaacag cgtcaggcca
       61 tagaagttga cgaagaagga caaatcagcg gccaaaccac accgagtaaa gacagcgatg
      121 cccgttggat aaagaaaaac ggcctctaca aactcggtta caaacaacat acccgtaccg
      181 atgtggaagg ctatatcgag aaactgcaca ttacccccgc caatgcccat gagtgcaaac
      241 acctgccgcc tttgctggaa gggatagctg aaggtacgac cgtctatgcc gacaaaggct
      301 atgacagtgc ggaaaaccgg caacatctgg aagagcgtca gttgttagac ggcattatgc
      361 gcaaagcctg ccgcaaccgt ccgctgtcgg aagcgcaaac caaacgcaac cgatatttgt
      421 cgaagacccg ttatgtggtc gaacaaagct tcggtacgct gcaccgtaaa ttccgctatg
      481 cgcggtcaac ctatttcgga ctgattaaag tgagtgcgca aagccacctg aaggcgatgt
      541 gtttgaacct gttgaaagcc gccaacaggc taagtgcgcc cgctgccgcc taaaaggcag
      601 c
//
LOCUS       DAXHKG010000253          599 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.253, whole genome shotgun sequence.
ACCESSION   DAXHKG010000253 DAXHKG010000000
VERSION     DAXHKG010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.253"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            172..465
                     /locus_tag="ACFMWP_002089"
     CDS             172..465
                     /locus_tag="ACFMWP_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892612.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPDCFDMKAVWQMFNRIPR"
BASE COUNT          158 a          150 c          160 g          131 t
ORIGIN      
        1 tccattcggc agggaaagcc tgaagaagaa ttttcccgta agatggccgg ctgcctgacc
       61 gacttggaaa actgtttgga aaaatacctc gaacagttcg ggccggtatc ggaaagtatc
      121 gaagcctgta ccgtcaaact gcaggagtaa ccgtcgttct tcaacaggct gatgaaaacc
      181 aacgacaagc tcaataggca gattgacgtg ttgcagaaac agtcggcagc catccacaac
      241 gaagcctata tcgaaatgaa cacgctgctt taccgccacc gcgaagtggt ttccgtccac
      301 aaccgcaagg cggattatgc ggaaaagggc aaagagcgga ttgcgctgtt cccgcgcggc
      361 ttgaacggca tcaccaagct gcctgccgcc gtcctgttgc ccgagcgtcc cgattgtttt
      421 gatatgaagg cagtttggca aatgtttaat agaataccga ggtaggcgta tcggctgccg
      481 gataaaaatg ccgtctgaaa cggaagcgtt cagacggcat tgttgcagtg gaacaaatca
      541 aaatgcaccc cgtcattcct gtctgtacgg tgatagcggc agtgttttcc tgcttcgtt
//
LOCUS       DAXHKG010000254          598 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.254, whole genome shotgun sequence.
ACCESSION   DAXHKG010000254 DAXHKG010000000
VERSION     DAXHKG010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.254"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            302..>598
                     /locus_tag="ACFMWP_002090"
     CDS             302..>598
                     /locus_tag="ACFMWP_002090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC5892613.1"
                     /translation="MTMQVFLTIPGYDVEAEIEKFVWMDAVIWQMPSWWMHEPWTVKK
                     YIDEVLTAGHGKLYQSDGRHSVNPTEGYGTGGLLQGKKHMLSLTWNAPIEAFTRE"
BASE COUNT          174 a          149 c          147 g          128 t
ORIGIN      
        1 actcattagt tacctaaaac ttaaaaagca gaaaccttta cgccgtcatt cccacgaaag
       61 tgggaatccg ggaacttaac gttacagtga tttatcggaa acggctgaaa ccgaatgaat
      121 tggattcccg cctgcgcggg aatgacgaat ccatccgtac ggaaacctgc accacgtcat
      181 tcccactaac ctacattccg tcattcccac gaaagtggga atccaggacg aaaaatctcc
      241 agaaaccgtt ttacccgata agtttccgca ccgacaggtc tggattcccg cctgcgcggg
      301 aatgacgatg caggtatttc tgacgattcc cggctatgat gttgaggcag aaatcgaaaa
      361 attcgtttgg atggatgctg tgatttggca gatgccgagc tggtggatgc acgagccttg
      421 gacagtgaaa aaatacatag acgaagtatt aaccgctgga cacggcaaac tctaccaaag
      481 cgacggcaga cacagcgtca atccgactga gggctacggc acaggcggct tgttgcaagg
      541 caaaaaacat atgctttcac tgacttggaa tgcgccgatt gaggcgttta cccgcgaa
//
LOCUS       DAXHKG010000255          567 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.255, whole genome shotgun sequence.
ACCESSION   DAXHKG010000255 DAXHKG010000000
VERSION     DAXHKG010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.255"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(144..500)
                     /locus_tag="ACFMWP_002091"
                     /pseudo
     CDS             complement(144..500)
                     /locus_tag="ACFMWP_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688109.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            499..>567
                     /locus_tag="ACFMWP_002092"
     CDS             499..>567
                     /locus_tag="ACFMWP_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC5892614.1"
                     /translation="MLPSKYEDNALQIKEKSTERTAP"
BASE COUNT          211 a          119 c           95 g          142 t
ORIGIN      
        1 ctctaaaaaa taatcgcttg ttttgacacc gatacactca tatagtggat taacaaaaat
       61 caggacaagg cgacgaagcc gcagacagta caaatagtac ggcaaggcga ggcaacgccg
      121 tactggttta aatttaatcc actatacaaa tacagaaact caagaaaata accttgtgta
      181 ttaaccatct caagcaattc agaaaaatca agaaattttc tgaccgtaaa caaacgtttc
      241 cctaaaaaaa cgatgtcttc aaaaatatcg accaaataat catcttcgcc gttttcattt
      301 ttatgggtta aaacaacacg ggaaaaatct gttttcagat gcttgcccgc ttgattgttc
      361 ggattattgt ccggaacgac aaaaccgtcc tcaaaatcaa agcagacgtt gcgtccttct
      421 acctttatct ctgtgcaata acaatcatgc agagaaatac catccgaaaa atttaggggc
      481 tgtactagat tagcagatat gttaccctcg aaatatgaag ataacgcact gcaaattaaa
      541 gaaaaaagta cagaaagaac tgctccg
//
LOCUS       DAXHKG010000256          547 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.256, whole genome shotgun sequence.
ACCESSION   DAXHKG010000256 DAXHKG010000000
VERSION     DAXHKG010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.256"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT          221 a           52 c           94 g          180 t
ORIGIN      
        1 gtcgccttgt cctgattttt gttaatccac tatacgtcct agattcccac tttcgtggga
       61 atgacgggat gtgggttttt gtgcggattt gaaccggtaa gggtggtgtg ggattggtgg
      121 tttgcttagg atcttttgga ttgtattttg tatatacatt tacttgttga taaaagataa
      181 aataaaatta gaaactaaaa gtgagaaaaa attaataata atagggatgt ataaatgtaa
      241 agactccgtt tcatagctaa ggttatctga atatatggaa aaaaagtaaa agtccataaa
      301 actaaaatat atagataatg ctaatgataa tagaattatc actttcctag agtaaggata
      361 atattttttt atcgtaaaaa aatataaaat aggataaata attgccatat agatagattt
      421 tgtaacaaaa ttaaaaataa ataataaaaa taatgtaata aagtatattt tttggctatg
      481 aaataaaatt gtacataatt gaacgagcag atcaaaaaat gaactacata taacaataaa
      541 taataac
//
LOCUS       DAXHKG010000257          540 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.257, whole genome shotgun sequence.
ACCESSION   DAXHKG010000257 DAXHKG010000000
VERSION     DAXHKG010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.257"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            32..394
                     /locus_tag="ACFMWP_002093"
     CDS             32..394
                     /locus_tag="ACFMWP_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HFC5892615.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTE
                     SAQEFSDKETFAKFPKIP"
     gene            425..>540
                     /locus_tag="ACFMWP_002094"
     CDS             425..>540
                     /locus_tag="ACFMWP_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC5892616.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYL"
BASE COUNT          169 a          146 c          115 g          110 t
ORIGIN      
        1 cgcacaaatt tagtcaatat caagaccaat tatgaaccaa ctcgaccaac ttggcacccg
       61 tatcaacctg atttgcaatg tcttcgacaa atggatcggg cagcaggatc tgaattacaa
      121 cctctttgcc gtactttata ccctggcaac cgaaggcagc cgcacgcaaa agcatatcgg
      181 cgaaaagtgg agcctgccca aacagaccgt ttcaggcgta tgcaaaaccc ttgccggaca
      241 agggttgatt gaatggcagg aaagcgaaca ggaccggcgc gaacggttgc tgtcgctgac
      301 cgaaaaaggc aaagcccatg ccgcaccttt aacagaaagc gcgcaggaat tcagcgacaa
      361 agagaccttt gcaaaattcc ccaaaatccc ctaaattccc accaagacat ttaggagatt
      421 ttccatgagc accttctttc aacaaaccgc gcaagccatg attgctaaac acatcgaccg
      481 tttccctcta ttgaagttgg atcaagtgat tgattggcag ccgatcgaac aatacctgaa
//
LOCUS       DAXHKG010000258          534 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.258, whole genome shotgun sequence.
ACCESSION   DAXHKG010000258 DAXHKG010000000
VERSION     DAXHKG010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.258"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT          163 a          125 c          107 g          139 t
ORIGIN      
        1 gcgggaatga cggcggagag ggtttgttgt ttcggataaa tccctgtagt ttttcgtttc
       61 tagattcccg cttttgcggg aatgacggcg gggggatttc tgtttttccg acaaattcct
      121 aaaacttaaa attccgttat tcccgcgaaa acagaaaacc aaaaatagaa acctaaaatc
      181 tcgtcattcc cgcaaaaaca gaaaaccaaa aaacagcaac ctaaaattcg tcattcccgc
      241 gcaggcggga atccagtccg ttcggtttcg cttgttttaa gtttcgggca acttccactt
      301 cgtcattccc gtgaaagtgg gaatccagtc cgttgagttt cagtcatttc cgataaatca
      361 ccgcaacgtt aaatttctag attcccgctt ttgcgggaat gacggcgggg gggatttctg
      421 tttttccgac aaattcctaa aacttaaaat tccgttattc ccgcgagaac agaaaaccaa
      481 aaacagaaac ctaaaatctc gtcattcccg caaaaacaga aaaccaaaaa acag
//
LOCUS       DAXHKG010000259          531 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.259, whole genome shotgun sequence.
ACCESSION   DAXHKG010000259 DAXHKG010000000
VERSION     DAXHKG010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.259"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT          156 a          141 c          108 g          126 t
ORIGIN      
        1 taaagaatcg ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca
       61 ctatatccgt ttgcgcccgc caagccgtgt tgcacagatg cgacacggct tttttctttc
      121 tgttgtcaga atgtaaattt tcgtcaaaaa acatcaaaaa tcaccccccc cccgaatttg
      181 cgtaaaataa agtgtaatcc ctttgatcat aagggaatgt tgacaattag atcgattctc
      241 ctaggctgac tttcgcaata aatggggttg tcaataattg tgtatggtcg tttgccgtcc
      301 ggcggccgtc attcccgcga acgcaggaat ccagcaacac aatgcagcag gactttatcg
      361 gaaaaaaccg aaaccccacc gactgtcatt cccgcaaaag ctggaatcca aaaacgcaac
      421 gcaacaggaa tttatcggaa aaaacagaac ccccccaccg ccgtcattcc cgcaaaagcg
      481 ggaatccaga cccgtcggca cggaaactta ccggataaaa cagtttcctt a
//
LOCUS       DAXHKG010000260          515 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.260, whole genome shotgun sequence.
ACCESSION   DAXHKG010000260 DAXHKG010000000
VERSION     DAXHKG010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.260"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..146)
                     /locus_tag="ACFMWP_002095"
     CDS             complement(<1..146)
                     /locus_tag="ACFMWP_002095"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HFC5892617.1"
                     /translation="MQNSAVLINTFEVPQGKEAETLAAWQKSRDFLKTQPGYIGTRLH
                     QNIV"
     gene            complement(169..354)
                     /locus_tag="ACFMWP_002096"
     CDS             complement(169..354)
                     /locus_tag="ACFMWP_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892618.1"
                     /translation="MGVCLDACCSAAGIARQIGKGGEIHGTLAFSLLFLSLGHIGMVA
                     YHHIKGESVLPRMLGKS"
BASE COUNT          122 a          137 c          132 g          124 t
ORIGIN      
        1 tccactatat tttgatgcag acgtgtaccg atgtagcccg gctgggtttt caggaaatcg
       61 cgtgatttct gccaagcagc caaagtttcg gcttctttgc cctgcggcac ttcaaaggtg
      121 ttgatgagta cagcactgtt ctgcatgatt taaatttaat ccactatatt aagattttcc
      181 gagcattcga ggcagcacgg attcgccttt gatgtggtgg taggcaacca ttccaatgtg
      241 tcccaacgac aaaaacagca atgaaaatgc cagcgtgccg tgaatttctc cgcccttgcc
      301 gatttgacgg gcaatgcctg cggcggaaca gcaagcatca aggcatacgc ccaatgctca
      361 atttggtgac ggcggtgttg gcggggcggt ttttacgttg gcggattccc cacccttgta
      421 tatcggaact cctgtatcat agcaacaaac cgcccgaccg ccacccgcgc ccaccaaaag
      481 cagacaaccg ttgcgtagct cagggagcgg caggg
//
LOCUS       DAXHKG010000261          496 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.261, whole genome shotgun sequence.
ACCESSION   DAXHKG010000261 DAXHKG010000000
VERSION     DAXHKG010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.261"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..317
                     /locus_tag="ACFMWP_002097"
     CDS             <1..317
                     /locus_tag="ACFMWP_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892619.1"
                     /translation="RLSHKRIAGLAGIAPHPREGEETKFKSRCFGGRSAVRKALYMAT
                     VAATRFEPLIRDFYQRLPSEGKPYKVAVTACMRKLLTISNARMRDYFAENDTAENGIR
                     TA"
BASE COUNT          112 a          120 c          145 g          119 t
ORIGIN      
        1 ggcggctgtc gcacaaacgg atagcgggtt tggccggcat tgccccgcac ccgagggagg
       61 gcgaggaaac caaatttaaa agccgctgct ttggcggaag gtctgcggtg cgtaaggcac
      121 tgtatatggc taccgtggca gcgacacgtt ttgaaccgct tattcgggat ttctaccaac
      181 gcctgccgtc cgagggtaag ccgtataagg ttgccgttac ggcatgtatg cgcaaactgc
      241 tgacgatatc gaatgcccgg atgcgtgatt attttgccga aaacgatacc gccgaaaacg
      301 gtatccggac ggcttgattt gagttttggt atttttgccc gacggggtga aaaatacagt
      361 tgctacggct cgatgaatcg tcagaaatac ccgaaccgtc attcccgcgc aggcgggaat
      421 ccagaccggt cggtgcggaa acttatcagg taaaacggtt tcttgagatt tttcgtcttg
      481 gattcccact ttcgtg
//
LOCUS       DAXHKG010000262          484 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.262, whole genome shotgun sequence.
ACCESSION   DAXHKG010000262 DAXHKG010000000
VERSION     DAXHKG010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.262"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..369
                     /locus_tag="ACFMWP_002098"
     CDS             <1..369
                     /locus_tag="ACFMWP_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892620.1"
                     /translation="AHECKHLSPLLEGLPKGTTVYADKGYDSAENRQHLEERQLLDGI
                     MRKACRNRPLTETQTKHNRYLSKIRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHL
                     KAMCLNLLKAANRLSASAAA"
BASE COUNT          125 a          113 c          143 g          103 t
ORIGIN      
        1 gcccatgagt gcaaacacct gtcgccgttg ttggaaggac tgcccaaagg tacgaccgtc
       61 tatgccgaca aaggctatga cagtgcggaa aaccggcaac atctggaaga gcgtcagttg
      121 ttagacggca ttatgcgcaa agcctgccgc aaccgtccgc tgacggaaac gcaaaccaaa
      181 cataaccgat atttgtcgaa gatccgttat gtggtcgaac aaagcttcgg tacgctgcac
      241 cgcaaattcc gctatgcgcg ggcagcctat ttcggactga ttaaagtgag tgcgcaaagc
      301 catctgaagg cgatgtgttt gaacctgttg aaagcggcca acaggttaag tgcgtccgct
      361 gccgcctaaa aagcagcccg gatgcctgat tatcgggtat ccggggatta agggggtgtt
      421 tgggtagaat taggaggtgt tatggggcga aaacagccga aaacctgtgt ttgggtttcg
      481 gctg
//
LOCUS       DAXHKG010000263          465 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.263, whole genome shotgun sequence.
ACCESSION   DAXHKG010000263 DAXHKG010000000
VERSION     DAXHKG010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.263"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>465
                     /locus_tag="ACFMWP_002099"
     CDS             <1..>465
                     /locus_tag="ACFMWP_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HFC5892621.1"
                     /translation="IDIKSGGNIDAYATAFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     ATIRAGVGEQARADAKIILEGIKSSIHTETVSSSKSTLWQKQAGRGSNIETLQ"
BASE COUNT          152 a          136 c          111 g           66 t
ORIGIN      
        1 atcgacatca aatctggtgg caacatcgac gcctacgcca ccgcattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac ttgacagcca aaaaaggcgc agatttctcg gcatcagcta cagcaaagca
      181 cacgacacca ccacccaagt catgaaaacc gcgctgccct caagggtagt tgcagaatca
      241 gccaacctcc aatcgggctg ggataccaaa ctgcaaggca cacagtttga aaccacactg
      301 ggtggcgcaa ccatacgcgc aggcgtaggc gagcaggcac gggcagatgc caagattatc
      361 ctcgaaggga tcaaaagcag catccacaca gaaaccgtga gcagcagcaa atctactcta
      421 tggcaaaaac aggcaggacg gggcagtaac atcgaaacct tgcaa
//
LOCUS       DAXHKG010000264          465 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.264, whole genome shotgun sequence.
ACCESSION   DAXHKG010000264 DAXHKG010000000
VERSION     DAXHKG010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.264"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            141..>465
                     /locus_tag="ACFMWP_002100"
     CDS             141..>465
                     /locus_tag="ACFMWP_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892622.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YLRDHRGRPAYPLLSMFKAILPGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYR"
BASE COUNT          125 a          148 c           83 g          109 t
ORIGIN      
        1 caacttttcc accgtcattc ccacgaaagt gggaatccag gtctgtcggc acggaaactt
       61 atcgagaaaa acggtttgag acctttgcaa aattccccaa aatcccctaa attcccacca
      121 agacatttag gagattttcc atgagcacct tctttcaaca aaccgcgcaa gccatgattg
      181 ccaaacacat cgaccgtttc ccgctattga agttggatca agtgattgat tggcagccga
      241 tcgaacaata cctgaatcgt caaaaaaccc gttaccttcg agaccaccgc ggccgtcctg
      301 cctatcccct gctgtccatg ttcaaagcca tcctgcccgg acaatggcac agcctctccg
      361 atcccgaact cgaacacagc ctcattaccc gcatcgattt caacctgttt tgccgttttg
      421 acgaactaag catccccgat tacagcacct tatgccgtta ccgca
//
LOCUS       DAXHKG010000265          460 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.265, whole genome shotgun sequence.
ACCESSION   DAXHKG010000265 DAXHKG010000000
VERSION     DAXHKG010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.265"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..455
                     /locus_tag="ACFMWP_002101"
     CDS             <1..455
                     /locus_tag="ACFMWP_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS30-like element IS1655 family transposase"
                     /protein_id="HFC5892623.1"
                     /translation="EADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARAAVR
                     ALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQY
                     FPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH"
BASE COUNT          150 a          116 c          100 g           94 t
ORIGIN      
        1 gggaagccga caccattgtc ggcaaaggac agaaaagcgc attattgacc ttggtcgaac
       61 gcgttacccg ctacaccatc atctgcaaat tggatagcct caaagccgaa gacactgccc
      121 gggcagctgt tagggcatta aaggcacata aagacagggt gcacaccatt accatggata
      181 acggcaaaga gttctaccaa cacaccaaaa taaccaaagc attgaaagcg gagacttatt
      241 tttgtcgccc ttaccattct tgggagaaag ggctgaatga gaacaccaac ggactcatcc
      301 ggcaatactt ccccaaacaa accgatttcc gtaacatcag tgatcgggag atacgcaggg
      361 ttcaagatga gttgaaccac cgaccaagaa aaacacttgg ctacgaaacg ccaagtgttt
      421 tattcttgaa tctgttccaa ccactaatac actagtgttg
//
LOCUS       DAXHKG010000266          438 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.266, whole genome shotgun sequence.
ACCESSION   DAXHKG010000266 DAXHKG010000000
VERSION     DAXHKG010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.266"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>438
                     /locus_tag="ACFMWP_002102"
     CDS             <1..>438
                     /locus_tag="ACFMWP_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892624.1"
                     /translation="TLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSTQRQAI
                     EVDEEGQINGQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHEC
                     KHLSPLLEGIAESTTVYADKGYDSAENRQHLKEHQLLDGIMRG"
BASE COUNT          143 a          117 c          104 g           74 t
ORIGIN      
        1 acaccctgtc cgaactgttg gaactgatca accgccaact gaccgaaaaa ggtttaaaaa
       61 tagagaaagc atccgctgcc gttgttgacg ccaccattat tcagaccgcc ggcagcacac
      121 agcgtcaggc tatagaagtc gatgaagaag gacaaatcaa cggccaaacc acaccgagta
      181 aggacaaaga tgcccgttgg atcaagaaaa acggcctcta caaactcggt tacaaacaac
      241 atacccgtac cgatgcggaa ggctatatcg agaaactgca catcaccccc gccaatgccc
      301 atgagtgcaa acacctgtcg ccgttgttag aagggatagc tgaaagtacg accgtctatg
      361 ccgacaaagg ctatgacagt gcggaaaacc ggcaacatct gaaagaacat cagttgttgg
      421 acggcattat gcgcgggc
//
LOCUS       DAXHKG010000267          417 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.267, whole genome shotgun sequence.
ACCESSION   DAXHKG010000267 DAXHKG010000000
VERSION     DAXHKG010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.267"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>417
                     /locus_tag="ACFMWP_002103"
     CDS             <1..>417
                     /locus_tag="ACFMWP_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892625.1"
                     /translation="TLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQTI
                     EVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDGEGYIEKLHITPANAHEC
                     KHLSPLLEGIAEGTTVYADKGYDSAENRQHLEEHQL"
BASE COUNT          135 a          113 c          100 g           69 t
ORIGIN      
        1 acaccctgtc cgaattgctg gaactgatca accgccaact gaccgaaaaa ggtttaaaaa
       61 tagagaaagc atccgctgcc gttgttgacg ccaccattat tcagaccgcc ggcagcaaac
      121 agcgtcagac catagaagtt gacgaagaag gacaagtcag cggccaaacc acaccgagta
      181 aggacagcga tgctcgttgg atcaagaaaa acggcctcta caaactcggt tacaaacaac
      241 atacccgtac cgatggggaa ggctatatcg agaaactgca cattaccccc gccaatgccc
      301 atgagtgcaa acacctgtcg cctttgctgg aagggatagc cgaaggtacg accgtctatg
      361 ccgacaaagg ctacgacagt gcggaaaacc ggcaacatct ggaagaacat cagttgt
//
LOCUS       DAXHKG010000268          416 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.268, whole genome shotgun sequence.
ACCESSION   DAXHKG010000268 DAXHKG010000000
VERSION     DAXHKG010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.268"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..379
                     /locus_tag="ACFMWP_002104"
     CDS             <1..379
                     /locus_tag="ACFMWP_002104"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC5892626.1"
                     /translation="ERLAARDIIRFPGFVNNVSEVIKEHHIFVLPSYYREGVPRSTQE
                     AMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKMIYFIENREAVRLMGNAS
                     YAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          109 a           94 c          108 g          105 t
ORIGIN      
        1 ggaacgcctt gccgcccgcg atattatccg tttccccggt tttgtgaaca atgtttccga
       61 agtgataaaa gaacatcata tattcgtatt gccgtcttat tatagggaag gcgttccccg
      121 aagcactcag gaggcaatgg ccgtcggcag ggcagtgatt acgacggatg tccccggatg
      181 cagggaaacg gtcgccgaca aggtcaacgg cttcctgatc gaaccttgga atccccgcat
      241 cttggccgaa aaaatgattt attttatcga aaacagggaa gccgtccgcc tgatggggaa
      301 tgcaagttat gcgattgcca aagataaatt cgatgccgaa aaagtcgatt tgaaattgct
      361 cgatattttg aaggcgtaaa caaggctgcc cgcttttgag tttcggtcat ttctga
//
LOCUS       DAXHKG010000269          401 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.269, whole genome shotgun sequence.
ACCESSION   DAXHKG010000269 DAXHKG010000000
VERSION     DAXHKG010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.269"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           97 a          109 c           98 g           97 t
ORIGIN      
        1 cgcatcctag attcccgcct gcgcgggaat gacggcgcat aagtttctgt gttgatttga
       61 gtctatggga acggtgtagg attggtggaa tcgttggaat cggtgggctg aagcccaccc
      121 tataactcac cttttacgaa tcctcctaca ccctatacaa caccttgaaa atccaccttg
      181 tcgggaatgc ccgaaccgtc agaaataccc gaatcgtcat tcccgcgcag gcgggaatcc
      241 agacctgtcg gcacagaaac ttatcgggca aaacggtttc ttgagattcc gcatcctaga
      301 ttcccgcctg cgcgggaatg acggctgcag atgcccaacg gtctttattc ctccatctct
      361 aagatttaca gcgatacacg ggtagtttaa ggaatgtccg a
//
LOCUS       DAXHKG010000270          397 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.270, whole genome shotgun sequence.
ACCESSION   DAXHKG010000270 DAXHKG010000000
VERSION     DAXHKG010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.270"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT          110 a           90 c           86 g          111 t
ORIGIN      
        1 tttttgaatt tcgggcaacg cttgaatctt cattccgcgc aggcggaaat tatcggtgcg
       61 gtacggcaac ttttttcgat atgaaaagac cgtcattcct gtaaaaacaa aaaatcaaaa
      121 acagaaaatt gaaattcgtc attcccgcgc aggcgggaat ctaggacgta aaatctatag
      181 tggattaaca aaaaccagta cagcgttgcc ttgacttagc tcgaagagaa cgattctcta
      241 aggtgctgaa gcaccgagtg agtcggttcc gcactatccg tactgtctgc ggcttcgtcg
      301 ctttctcctg atttttgtta atccactata aagaaaccgt ttttctcgat aagtttccgt
      361 gccgacagac ctggattccc actttcgtgg gaatgac
//
LOCUS       DAXHKG010000271          394 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.271, whole genome shotgun sequence.
ACCESSION   DAXHKG010000271 DAXHKG010000000
VERSION     DAXHKG010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.271"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>394
                     /locus_tag="ACFMWP_002105"
     CDS             <1..>394
                     /locus_tag="ACFMWP_002105"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC5892627.1"
                     /translation="LLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVIDAGY
                     DVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYIDEVLTAGHGKLYQSDGRHRVNPTE
                     GYGTGGLLQGKKHMLSLTWNAPIEAFTRE"
BASE COUNT          113 a           89 c          110 g           82 t
ORIGIN      
        1 tttattatta gacggcggca aggcgttcgg acattctcac ggcgggttaa accgcacgct
       61 tcacaaaaaa gcgaaagaag ttttgaccgc gctcggacac aatgttcaag aaaccgtgat
      121 tgatgccggc tatgatgttg aggcagaaat cgaaaaattc gtttggatgg atgccgtgat
      181 ttggcagatg ccgggctggt ggatgcacga gccttggaca gtgaaaaaat acatagacga
      241 agtattaacc gctggacacg gcaaactcta ccaaagcgac ggcagacacc gcgtcaatcc
      301 gactgagggc tacggcacag gcggcttgtt gcaaggcaaa aaacatatgc tttcactgac
      361 ttggaatgcg ccgattgagg cgtttacccg cgaa
//
LOCUS       DAXHKG010000272          386 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.272, whole genome shotgun sequence.
ACCESSION   DAXHKG010000272 DAXHKG010000000
VERSION     DAXHKG010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.272"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>386
                     /gene="mafB"
                     /locus_tag="ACFMWP_002106"
     CDS             <1..>386
                     /gene="mafB"
                     /locus_tag="ACFMWP_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC5892628.1"
                     /translation="GPQGSDYPPPGGARDIYSYHIKGTSTKTKINTVPQAPFSDRWLK
                     ENAGAASGFLSRADEAGKLIWENDPNQNWWGNRMDDVRGIIQGAANPFLTGFQGLGVG
                     AITDSAVNPVTYAAARKTLQGIHNLG"
BASE COUNT          117 a           89 c          100 g           80 t
ORIGIN      
        1 ggaccgcaag gcagcgatta tccgcccccc ggaggagcaa gggatatata cagttaccat
       61 atcaaaggaa cttcaacaaa aacaaagata aacactgttc cgcaagcccc gttttcagac
      121 cgctggctaa aagaaaatgc cggtgccgct tccggttttc tcagccgtgc ggatgaagca
      181 ggaaaactga tatgggaaaa cgaccccaat caaaattggt ggggtaaccg tatggatgat
      241 gttcgcggca tcatccaagg tgcagccaat ccttttctaa cgggttttca gggattggga
      301 gttggggcaa ttacagacag tgcggtaaac ccggtaacct atgcggcagc acggaaaact
      361 ttacagggta ttcacaattt aggaaa
//
LOCUS       DAXHKG010000273          380 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.273, whole genome shotgun sequence.
ACCESSION   DAXHKG010000273 DAXHKG010000000
VERSION     DAXHKG010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.273"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..71
                     /locus_tag="ACFMWP_002107"
     CDS             <1..71
                     /locus_tag="ACFMWP_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892629.1"
                     /translation="VKQGIYPHNWGGGNADFSIGYD"
     gene            108..380
                     /locus_tag="ACFMWP_002108"
                     /pseudo
     CDS             108..380
                     /locus_tag="ACFMWP_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT           99 a           92 c          107 g           82 t
ORIGIN      
        1 atgtcaaaca gggtatttat ccgcataatt ggggtggcgg caatgcggac ttttctattg
       61 gatacgattg aagtaatgtc ggattcgaga atccgaccta cggaaaactg aaagagcatc
      121 ggctgcagga cggcattatg cgcaaagcct gccgcaaccg tccgctgtcg gaagtgcaaa
      181 ccaaacgtaa ccgatatttg tcgaagaccc gttatgtggt cgaacagagc ttcggtacgc
      241 tgcaccgtaa gttccgctat gcgcgggcag cctatttcgg actgattaaa gtgagtgcgc
      301 aaagccacct gaaggcgatg tgtttgaacc ttttgaaagc ggccaacagg ctaagtgcgc
      361 ccgctgccgc ccaaaaggcg
//
LOCUS       DAXHKG010000274          366 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.274, whole genome shotgun sequence.
ACCESSION   DAXHKG010000274 DAXHKG010000000
VERSION     DAXHKG010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.274"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..>366)
                     /locus_tag="ACFMWP_002109"
     CDS             complement(<1..>366)
                     /locus_tag="ACFMWP_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892630.1"
                     /translation="VKEYQPPVGIFLFVCFEKCLFPDFAIPIRFCAVRCVLARTCSKS
                     DVVPVFEALIRDADFQYIFLSYNNEGLMSVGQVREIFECFGKYNLVQTEYRRFKADKT
                     ENRNHKANSIFEYLHILEKT"
BASE COUNT          123 a           87 c           59 g           97 t
ORIGIN      
        1 gtcttttcta aaatatgcag atattcgaat atcgaatttg ccttatgatt acggttttct
       61 gtcttatctg ccttaaaacg ccggtattcc gtttgaacca aattatattt gccgaaacac
      121 tcaaaaatct cccttacctg cccgacagac atcaagcctt cgttgttgta gctgagaaaa
      181 atatattgaa agtccgcatc cctaatcaaa gcctcaaata ccggaaccac atccgatttt
      241 gagcaagtcc gcgctaaaac acatcgtaca gcgcaaaacc ggatgggaat ggcaaaatcc
      301 ggaaacaaac atttttcaaa gcatacaaac aaaaaaatac caaccggagg ttggtattcc
      361 ttaact
//
LOCUS       DAXHKG010000275          348 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.275, whole genome shotgun sequence.
ACCESSION   DAXHKG010000275 DAXHKG010000000
VERSION     DAXHKG010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.275"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            250..321
                     /locus_tag="ACFMWP_002110"
                     /pseudo
     CDS             250..321
                     /locus_tag="ACFMWP_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
BASE COUNT           82 a           81 c          107 g           78 t
ORIGIN      
        1 gcaaagccat ctgaaggcga tgtgtttgaa cctgttgaaa gccgccaaca ggctaagtgc
       61 gcctgttgcc gcctaaaagg cagcacggat gcctgattat cgggtatccg gggaggatta
      121 agggggtatt ggggtaaaat taggaggtat ttggggcgga aatagctgaa aacctgtgtt
      181 tgggtttcgg ctgtcgggaa ggaaaggaat tttgcaaagg tctcgggcta tgccggctgc
      241 tgccgcccat tgcaccttcg ccgaatcctg ccgcccaccg ccgaagccct catgcgttcg
      301 cggtacagcg cgtatgtgct actatagtgg attaacaaaa accagtac
//
LOCUS       DAXHKG010000276          347 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.276, whole genome shotgun sequence.
ACCESSION   DAXHKG010000276 DAXHKG010000000
VERSION     DAXHKG010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.276"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT          121 a           86 c           62 g           78 t
ORIGIN      
        1 actcattagt tacctaaaac ttaaaaaaca gaaaccttta cgccgtcatt cccacgaaag
       61 tgggaatcta gaacccaaat gctaaggcga tttatcggaa acggctgaaa ccgaacgaat
      121 tggattcccg ccttcgcagg aatgacaact cattagttac ctaaaactta aaaaacagaa
      181 acctttaccc cgtcattccc acgaaagtgg gaatctagaa cccaaatgct aaggcgattt
      241 atcggaaacg gctgaaaccg aatgaattgg attcccgcct gtgcgggaat gacgacttat
      301 tagttaccta acacttaaaa aacagaaacc tttccgcgtc attccca
//
LOCUS       DAXHKG010000277          334 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.277, whole genome shotgun sequence.
ACCESSION   DAXHKG010000277 DAXHKG010000000
VERSION     DAXHKG010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.277"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           90 a           65 c           89 g           90 t
ORIGIN      
        1 tttttgacac attttcatga tttcaaatcc cgttattccc aagtggacgg aaacccgata
       61 atgggaagcc gcagagactt atcgggaaaa cggcaagccc tccgccgtca ttcccgcgca
      121 ggcgggaatc tagaaataaa aaaccacggt gttatcggca atgactgaaa ccggagaaat
      181 gacgaaattg aagcgtgcgg aaatgtgtcg gaaatcgctg aagccggata aactagattc
      241 ccgcttttgc gggaatgacg ggattttagg tttttggttt gttttcgcgg caatgatggg
      301 attttaggtt tttggtttgt tttcacggca atga
//
LOCUS       DAXHKG010000278          326 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.278, whole genome shotgun sequence.
ACCESSION   DAXHKG010000278 DAXHKG010000000
VERSION     DAXHKG010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.278"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           90 a           55 c           73 g          108 t
ORIGIN      
        1 tttctgtttt tgattttctg ttttcgtagg aatgacggtt taaaagttac ccgaaacctc
       61 aaaaaaaagg ctgtgtttta atatagtgtt gatagacgta cttggcttcc atgtattcaa
      121 tcgtggaaat ctatatcttc gtcctcgccg aaatagtcta tgcccgatat acaattttga
      181 tacacaaact tggaaatatg ggtatcgtcg ccggagcgat agaatgcgga cagttatata
      241 tatacggttt ttttagggaa gcgggcagat gaagggcgga ttttgaatta accccatgca
      301 aattgacttt tgcaggcggt tttacc
//
LOCUS       DAXHKG010000279          292 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.279, whole genome shotgun sequence.
ACCESSION   DAXHKG010000279 DAXHKG010000000
VERSION     DAXHKG010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.279"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           70 a           76 c           63 g           83 t
ORIGIN      
        1 ctcggacttt cagataatct ttgaatatta ctgttgttct aaggtctaga ttcccgcctg
       61 cgcggaaatg acgaatccat tcgcacggaa acctacattc cgtcattccc acgaaagtgg
      121 gaatccagaa tcccggactt tcagataatc tttgaatatt gctgttatcc caaggtctgg
      181 attcccgcct acgcgggaat gacggcagag cggtttctgt tgctcccgat aaatgtcgca
      241 atctctaatc ccatcattcc cacgaaagtg ggaatccggt tcgttcggtt tc
//
LOCUS       DAXHKG010000280          279 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.280, whole genome shotgun sequence.
ACCESSION   DAXHKG010000280 DAXHKG010000000
VERSION     DAXHKG010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.280"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..185
                     /locus_tag="ACFMWP_002111"
     CDS             <1..185
                     /locus_tag="ACFMWP_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC5892631.1"
                     /translation="DGFVVPAKAGIRNQKPQKFIGKTETQKQRKPNGQDSRLRGNDGS
                     YITQKIETKQMGFPLA"
BASE COUNT           93 a           65 c           67 g           54 t
ORIGIN      
        1 tggatggatt cgtcgttccc gcgaaagcgg gaatccggaa ccagaaacca caaaaattta
       61 tcgggaaaac cgaaactcaa aaacaacgga aaccgaacgg acaggattcc cgcctgcgcg
      121 ggaatgacgg ctcatacatc acccaaaaaa ttgaaaccaa acagatggga ttccctcttg
      181 cgtgaggctg acagatgccg tctgaaagac tttcagacgg catagctttt tctctttgaa
      241 tttatagtgg attaacaaaa atcaggacaa ggcggcgag
//
LOCUS       DAXHKG010000281          275 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.281, whole genome shotgun sequence.
ACCESSION   DAXHKG010000281 DAXHKG010000000
VERSION     DAXHKG010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.281"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>275
                     /locus_tag="ACFMWP_002112"
     CDS             <1..>275
                     /locus_tag="ACFMWP_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC5892632.1"
                     /translation="KYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVI
                     GYETHFSGHGHEVHSPFDNHDSRSTSDFSGGVDGGFTVYQLHRTGSE"
BASE COUNT           72 a           61 c           69 g           73 t
ORIGIN      
        1 aaataccatc tgttcggcga tggtcgcggc agtgttaaaa atcgggttta cgccgtccaa
       61 acatttgatg caactgcggt cggccccata ctgcctatta cacacgaacg gacaggattt
      121 gaaggtgtta tcggctatga aacccatttt tcaggacatg gacatgaagt gcacagtccg
      181 ttcgataatc atgattcaag aagcacttct gatttcagcg gcggtgtaga cggtggtttt
      241 actgtttacc aacttcatcg gacagggtcg gaaat
//
LOCUS       DAXHKG010000282          275 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.282, whole genome shotgun sequence.
ACCESSION   DAXHKG010000282 DAXHKG010000000
VERSION     DAXHKG010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.282"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..>275)
                     /locus_tag="ACFMWP_002113"
     CDS             complement(<1..>275)
                     /locus_tag="ACFMWP_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC5892633.1"
                     /translation="KYHLFGNARGSVKKRVYAVQTFDATAVSPVLPITHERTGFEGVI
                     GYETHFSGHGHEVHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSE"
BASE COUNT           75 a           68 c           60 g           72 t
ORIGIN      
        1 atttccgacc ctgttcgatg aagttggtaa acagtaaaac cgccgtctac accgccgctg
       61 aaatcagaag tgctttttga atcatgatga tcgaacggac tgtgtacttc atgtccgtgc
      121 cctgaaaaat gggtttcata accgataaca ccttcaaacc ctgtccgttc gtgtgtaata
      181 ggcagtacag gactgaccgc agttgcatca aatgtctgga cggcgtaaac ccgcttttta
      241 acactgccgc gagcattacc aaacagatgg tattt
//
LOCUS       DAXHKG010000283          275 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.283, whole genome shotgun sequence.
ACCESSION   DAXHKG010000283 DAXHKG010000000
VERSION     DAXHKG010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.283"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           63 a           63 c           56 g           93 t
ORIGIN      
        1 tctaaaaaat ttatgctatt aaatcagtaa tttctgatga attttgaaaa cttaatcccg
       61 tcattcccgc gcaagcggga atccggctcg ttcggtttcg cttgttttaa gtttcgggta
      121 acttccactt cgtcattccc gcacaggcgg gaatccggtt cgttcggtct cgcttgtttt
      181 aagtttcggg taacttccac ttcgtcattc ccgcgcaggc gggaatccaa tgcgttgagt
      241 ttcagctatt tagaataaat tttgaaactc taatc
//
LOCUS       DAXHKG010000284          274 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.284, whole genome shotgun sequence.
ACCESSION   DAXHKG010000284 DAXHKG010000000
VERSION     DAXHKG010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.284"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>274
                     /locus_tag="ACFMWP_002114"
     CDS             <1..>274
                     /locus_tag="ACFMWP_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HFC5892634.1"
                     /translation="GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEA
                     LPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQAS"
BASE COUNT           60 a           65 c           85 g           64 t
ORIGIN      
        1 ggtttattgt ttgcaaccct taaaggaaaa accatgaaga aaatgttcgt gctgttctgt
       61 atgctgttct cctgcgcctt ctcccttgcg gcggtaaaca tcaatgcggc ttcgcagcag
      121 gagttggagg cgctgccggg cataggccct gcgaaggcga aggccattgc ggaataccgt
      181 gcgcaaaacg gtgcgttcaa gtctgtggac gatttgacca aggtaaaggg catcggccct
      241 gcggtgctgg cgaagctgaa ggatcaggct tctg
//
LOCUS       DAXHKG010000285          266 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.285, whole genome shotgun sequence.
ACCESSION   DAXHKG010000285 DAXHKG010000000
VERSION     DAXHKG010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.285"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(<1..83)
                     /locus_tag="ACFMWP_002115"
     CDS             complement(<1..83)
                     /locus_tag="ACFMWP_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892635.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILT"
BASE COUNT           69 a           49 c           66 g           82 t
ORIGIN      
        1 tcggtcaaaa tcttctgccg tttattggtt acaaccgtaa aaaagtaagt gccgccattg
       61 cggtaaaaac gacggtattt catagtatta tgctcggaat gattttgtag gtcggattct
      121 tgaattcgac attttgggca ttgctgcaat ggattgcaat gatgggaatg ttaaaggttt
      181 tgtcggatac aagtatccga cctacgcttg ctgaaccgtc attcccacgg aagtgggaat
      241 ctagaacgcg gggtttcagt catttc
//
LOCUS       DAXHKG010000286          265 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.286, whole genome shotgun sequence.
ACCESSION   DAXHKG010000286 DAXHKG010000000
VERSION     DAXHKG010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.286"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..158
                     /locus_tag="ACFMWP_002116"
     CDS             <1..158
                     /locus_tag="ACFMWP_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC5892636.1"
                     /translation="VEQSFGTLHRKFRYARVAYFGLIKVSAQSHLKAMCLNLLKAANR
                     LSAPAAA"
BASE COUNT           61 a           58 c           87 g           59 t
ORIGIN      
        1 tggtcgaaca gagcttcggt acgctgcacc gtaaattccg ctatgcccgg gtagcctatt
       61 tcgggctgat taaagtgagt gcgcaaagcc acctgaaggc gatgtgtttg aacctgttga
      121 aagcggccaa caggctaagt gcgcccgctg ccgcctaaaa agcggcccgg atgcctgatt
      181 atcgggtgtc cgggcaggat taagggggtg tttgggtaaa attaggcggt atttggggcg
      241 aaaacagctg aaaacctgtg ttggg
//
LOCUS       DAXHKG010000287          263 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.287, whole genome shotgun sequence.
ACCESSION   DAXHKG010000287 DAXHKG010000000
VERSION     DAXHKG010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.287"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            31..201
                     /locus_tag="ACFMWP_002117"
     CDS             31..201
                     /locus_tag="ACFMWP_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HFC5892637.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT           72 a           76 c           71 g           44 t
ORIGIN      
        1 atccgctata caaaaaacaa ggaaacacaa atggcgcaat atatgtgcgg cccctgcggc
       61 tggatttacg atgaagaaca cggcgacccc gaacacggca tcccccctgg gacaaagttt
      121 gaagacatcc ccgacgactg gaaatgcccc gaatgcggcg tgggcaaaga agatttctac
      181 ctgttggatt tcgtgatata gcggcagccg cacccttagg gaaaaccccg tcatccggcg
      241 ttccgcctgc ggcggcaggg aac
//
LOCUS       DAXHKG010000288          260 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.288, whole genome shotgun sequence.
ACCESSION   DAXHKG010000288 DAXHKG010000000
VERSION     DAXHKG010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.288"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            complement(11..>260)
                     /locus_tag="ACFMWP_002118"
     CDS             complement(11..>260)
                     /locus_tag="ACFMWP_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFC5892638.1"
                     /translation="IYVNESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGVWL
                     HGAAADVIKESAGIAAGLLAGEISPAARWLRNRITESM"
BASE COUNT           46 a           97 c           62 g           55 t
ORIGIN      
        1 ctatatcttc ttacatactt tcagttatcc ggttgcgcag ccaccttgcc gccggggaga
       61 tttcgccagc caacagcccc gccgcaatgc ctgccgattc ttttatgaca tccgccgccg
      121 cgccgtgcag ccacacgccc gcgcaggcgg cttcaaaaac cggcacgccc tgtgcgagca
      181 gactgccgat gatgccgccc aatacgtcgc cactgcccgc cgttgccaat cccgcgttgc
      241 cgctttcgtt gacatagatt
//
LOCUS       DAXHKG010000289          258 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.289, whole genome shotgun sequence.
ACCESSION   DAXHKG010000289 DAXHKG010000000
VERSION     DAXHKG010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.289"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           70 a           65 c           50 g           73 t
ORIGIN      
        1 atctcaaatc ccgtcattcc ctcaaaaaca gaaaaacaaa atcagaaacc taaaatcccg
       61 tcattcccgc agctcttcgt cattcccgtg aaagcgggaa tctagacctt ttaaattttc
      121 acacggcttt tgaatattgc cgttacccga aggtctggat tcccgcctgc acgggaatga
      181 cggcagagcg gtttcagttg tttctaaata aatttttgca gcgttggatt tttagattcc
      241 cgctttcgcg ggaatgac
//
LOCUS       DAXHKG010000290          250 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.290, whole genome shotgun sequence.
ACCESSION   DAXHKG010000290 DAXHKG010000000
VERSION     DAXHKG010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.290"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           68 a           69 c           47 g           66 t
ORIGIN      
        1 tcagatttcc gtgtttcgcg tttccggcaa ttcaagattg gcaaaacacg tcagcctgct
       61 tcgcaaggca ggtttttaaa actttatcag gcgttcgggc atatcggttc gaccggtccg
      121 catttccggc aatcaacact gccgacggtt gccgcatttc tttttgatat acaatcacac
      181 tttcaaaaaa catacgcagg caacaaaatc atcctccccc gattggcaaa cattccggca
      241 aattaaaacc
//
LOCUS       DAXHKG010000291          241 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.291, whole genome shotgun sequence.
ACCESSION   DAXHKG010000291 DAXHKG010000000
VERSION     DAXHKG010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.291"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>241
                     /locus_tag="ACFMWP_002119"
     CDS             <1..>241
                     /locus_tag="ACFMWP_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HFC5892639.1"
                     /translation="VDKNSDTMHFKGFKAADVHFIRSGSDLVLSASEQDNVRISGFFY
                     GENHRVDTFVFDDAAISNPDFAKYINAGNNLVQSMS"
BASE COUNT           69 a           42 c           49 g           81 t
ORIGIN      
        1 atgtggataa aaactctgac actatgcact ttaaaggatt taaagcagca gatgttcatt
       61 ttatccgttc cggaagtgat ttggtgctta gcgcttctga acaagacaac gtacgtattt
      121 ccggattctt ctatggtgaa aaccatcgtg tagatacatt tgtctttgat gatgcagcta
      181 tcagtaatcc agattttgcc aagtatatta atgctggcaa taatttggta cagtctatgt
      241 c
//
LOCUS       DAXHKG010000292          234 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.292, whole genome shotgun sequence.
ACCESSION   DAXHKG010000292 DAXHKG010000000
VERSION     DAXHKG010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.292"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           69 a           58 c           48 g           59 t
ORIGIN      
        1 aacaaaaacc ggtacggcgt tgtctcgcct tagctcaaag agaacgattc tctaaggtgc
       61 tgaagcacga gtgaatcggt tccgtaccat ctgtactgtc tgcggcttcg tcgccttgtc
      121 ctgatttttg tgaatccact atagaatttc aatgcctcaa gaatttatcg gaaaaaacca
      181 aaacccttcc gccgtcattc ccacaaaagt gggaatctag aaatgaaaag cagc
//
LOCUS       DAXHKG010000293          228 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.293, whole genome shotgun sequence.
ACCESSION   DAXHKG010000293 DAXHKG010000000
VERSION     DAXHKG010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 228)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 228)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.293"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           80 a           54 c           44 g           50 t
ORIGIN      
        1 gaaactgaac gaattagatt cccgcctgcg cgggaatgac aactcattag ttacctaaca
       61 cttaaaaaac agaaaccttt ccgcgtcatt cccacgaaag tgggaatccg ggaacttaac
      121 gttacagtga tttatcggaa acgactgaaa ccgaagagac cggattcccg cctgcgtggg
      181 aatgacaact cattagttac ttaaaactta aaaaacagaa acctttac
//
LOCUS       DAXHKG010000294          227 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.294, whole genome shotgun sequence.
ACCESSION   DAXHKG010000294 DAXHKG010000000
VERSION     DAXHKG010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.294"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           81 a           57 c           45 g           44 t
ORIGIN      
        1 ctttaatcag tcggacaaaa tgcctttatc cgatggaacc gttttccgcc cgaacggaaa
       61 taagcggttt tcccctgtaa acagataaaa ccaaccgggt attcatacac agccaaaaaa
      121 aagccgtccg aacccaaagg ggacagacgg ccaaacacat tacggggaaa acgtcttact
      181 caatgagtct gcgaaacaga cattgctaag acaactgcaa ttataag
//
LOCUS       DAXHKG010000295          225 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.295, whole genome shotgun sequence.
ACCESSION   DAXHKG010000295 DAXHKG010000000
VERSION     DAXHKG010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.295"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           65 a           61 c           51 g           48 t
ORIGIN      
        1 gtcatttcca taaaaaacag caacccgaaa cagcaactta aaaacagcaa cctgaaacct
       61 cgtcattccc gcgcaggtgg gaatccagat cattgggtgg cggcaatgtt caaaagtcgt
      121 ctgaaaaatc agaagttcta gattcccgtt ttcacgggaa tgacggaatt tcagacggca
      181 tctgcccgcc ccgtcattcc cgcgcaggcg ggaatctagt ccgtt
//
LOCUS       DAXHKG010000296          222 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.296, whole genome shotgun sequence.
ACCESSION   DAXHKG010000296 DAXHKG010000000
VERSION     DAXHKG010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.296"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           62 a           61 c           51 g           48 t
ORIGIN      
        1 aagccgtagg tcggatactt gtatccgaca aaagcctgcc atctcaaata gccgtcggat
       61 tcgagaatcc gacctgccaa accgggcgcg gacgctccgg ccggcagtta gtacgcaaat
      121 cgaacagaac atcacaaaaa agcccgattc ggattttcca atcgggcttt tttgcgcccg
      181 ttttgtcatc ccgtgaaata tccgcatgac aaaaatatag tg
//
LOCUS       DAXHKG010000297          207 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.297, whole genome shotgun sequence.
ACCESSION   DAXHKG010000297 DAXHKG010000000
VERSION     DAXHKG010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.297"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
     gene            <1..>207
                     /locus_tag="ACFMWP_002120"
     CDS             <1..>207
                     /locus_tag="ACFMWP_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFC5892640.1"
                     /translation="AKAIRRAGIAVIIANPRQTHQFAQSQPLTKTDAKDAKMPAFFAQ
                     MTAQKEDSQTMPYQPPTEAEEVLEA"
BASE COUNT           61 a           71 c           48 g           27 t
ORIGIN      
        1 gccaaagcca tccgccgagc aggcatagcc gtgattatcg ccaacccgcg tcagacgcat
       61 cagtttgccc aatcgcagcc gctgaccaaa accgacgcca aagatgccaa aatgcccgcc
      121 ttcttcgcac agatgacggc acagaaagaa gattcgcaaa ccatgcccta ccaaccgccc
      181 accgaagcgg aagaagtgtt ggaagcc
//
LOCUS       DAXHKG010000298          202 bp    DNA     linear   BCT 02-OCT-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain M13 240372
            SAMEA2073883-rid23343183.denovo.298, whole genome shotgun sequence.
ACCESSION   DAXHKG010000298 DAXHKG010000000
VERSION     DAXHKG010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA2073883
            Sequence Read Archive: ERR351658
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002378541.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002378541.1
            Genome Coverage       :: 163x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/29/2024 13:58:44
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,120
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,964
            CDSs (with protein)               :: 1,964
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 64 of 100
            Pseudo Genes (internal stop)      :: 17 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA2073883-rid23343183.denovo.298"
                     /strain="M13 240372"
                     /db_xref="taxon:487"
BASE COUNT           60 a           48 c           52 g           42 t
ORIGIN      
        1 gcgaacgcgg gaatccagta accgaaaaac cacgggaatc tatcggaaaa aacagaaacc
       61 cccgaccgtc attcccgcga acgcgggaat ctagaacgta gaatctgaga aaccgtttta
      121 ctcgataaat ttccgtgccg aggggtctgg attcccgcgt tcgcgggaat gacggcatat
      181 tttttgcatt tgatataaag gg
//
